task
stringclasses
5 values
input
stringlengths
89
339
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Fc1cccc(-c2nc(-c3ccc4c(c3)nnn4C3CCCC3)no2)c1 ### Response: 2
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N(C)S(=O)(=O)C[C@@H](C)CCl Fragment 2: [4*][C@@H](C)c1cc2ccccc2o1 ### Response: C[C@@H](CCl)CS(=O)(=O)N(C)[C@@H](C)c1cc2ccccc2o1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1ccc(-c2n(cc[nH+]2)C[C@H]2C[NH+](C)CCN2C)c(c1)OCC ### Response: CCOc1ccccc1-c1[nH+]ccn1C[C@H]1C[NH+](C)CCN1C
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [3*]OCC Fragment 2: [5*]N1CCc2ccccc21 ### Response: CCOc1cc(C#N)ccc1OCC(=O)N1CCc2ccccc21
canonicalization
### Instruction: Canonicalize the following SMILES string. C/C=N/OC(NC(CC)(C(F)(F)F)C(F)(F)F)=O ### Response: C/C=N/OC(=O)NC(CC)(C(F)(F)F)C(F)(F)F
functional_group
### Instruction: Does the molecule contain a hydroxyl group? CC[NH+]1CC[C@@H]([NH2+]CCCC(=O)N2Cc3ccccc3C2)[C@H](C)C1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. c1c(N(C)C(=O)[C@@H](C(C)C)Sc2nnnn2C2CC2)cccc1 ### Response: CC(C)[C@@H](Sc1nnnn1C1CC1)C(=O)N(C)c1ccccc1
functional_group
### Instruction: Does the molecule contain a nitrile group? COc1csc(C(=O)Nc2ccc(Br)nc2C)c1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. c1ccc(C(Nc2c(N3C(CCC3)=O)cccc2)=O)cc1OCc1ccccc1 ### Response: O=C(Nc1ccccc1N1CCCC1=O)c1cccc(OCc2ccccc2)c1
canonicalization
### Instruction: Canonicalize the following SMILES string. C1(c2n3c(c(C(=O)Oc4ccc(OCC)cc4)n2)cccc3)CC1 ### Response: CCOc1ccc(OC(=O)c2nc(C3CC3)n3ccccc23)cc1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Nc1cc(-c2cccc([N+](=O)[O-])c2)no1 ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. N1(C(Cc2cc(C)ccc2C)=O)CCC(CC1)OCc1ccccc1OC ### Response: COc1ccccc1COC1CCN(C(=O)Cc2cc(C)ccc2C)CC1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [16*]c1cc2cc(Cl)ccc2oc1=[NH2+] Fragment 2: [6*]C(N)=O ### Response: NC(=O)c1cc2cc(Cl)ccc2oc1=[NH2+]
canonicalization
### Instruction: Canonicalize the following SMILES string. CC(C)(C)[C@H]1CCC2=C3C(S[C@H]2C1)=NC(=NC3=O)CCC(=O)N1CCCCCC1 ### Response: CC(C)(C)[C@H]1CCC2=C3C(=O)N=C(CCC(=O)N4CCCCCC4)N=C3S[C@H]2C1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)c1cc(C)ccc1[16*] Fragment 2: [1*]C(=O)C1CC1 ### Response: Cc1ccc(-n2ccnc2)c(C(=O)Nc2ccc(NC(=O)C3CC3)cc2)c1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CCc1ccc([C@H]2C[C@@H](C(F)(F)F)n3ncc(C(=O)N[C@@H](C)COC)c3N2)cc1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCCNC(=O)C(=O)Nc1ccc(F)cc1Cl ### Response: 3
ring_counting
### Instruction: Count the five-membered rings in the following molecule. C[C@@H](Sc1nncn1C)[C@@H](C)C(=O)[O-] ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(NC([C@@H]2C[C@H]3CC[C@@H]2C3)=O)cccn(C)c1=O ### Response: Cn1cccc(NC(=O)[C@@H]2C[C@H]3CC[C@@H]2C3)c1=O
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [10*]N1CCCC1=O Fragment 2: [1*]C(=O)[C@H]([4*])C ### Response: C[C@H](C(=O)Nc1ccc(N2CCCC2=O)cc1)N1CCOC(C)(C)C1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N1CCN(C)C[C@@H]1[13*] Fragment 2: [8*]C(F)F ### Response: CC(C)Cn1ncc(C(=O)N2CCN(C)C[C@@H]2C(C)C)c1C(F)F
ring_counting
### Instruction: Count the five-membered rings in the following molecule. C[C@@H]([NH2+]C[C@H]1CC[C@H](C(N)=O)O1)c1ccc2c(c1)OCCCO2 ### Response: 1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCC1(CC)[C@@H](NC(=O)Nc2ccc(C(=O)NC)cc2)[C@H](C)[C@@H]1OC ### Response: 0
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CC(C)(C)c1cc([C@@H]([NH3+])CO)c(O)c([N+](=O)[O-])c1 ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. C1CC[C@@H]([C@@H]([C@@H]1C)C)n1c(SCC(=O)N2CCN(C(C)=O)CC2)nc2c(c1=O)cccc2 ### Response: CC(=O)N1CCN(C(=O)CSc2nc3ccccc3c(=O)n2[C@H]2CCC[C@@H](C)[C@H]2C)CC1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCCC[NH+]1CCCC[C@@H]1CNC(=O)c1ccncc1Cl ### Response: 0
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CCN(CC(C)(C)O)C(=O)Cc1ccc(C[NH3+])cc1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*][NH2+][C@@H]1C[C@H]2CC[C@]1(C)C2(C)C Fragment 2: [3*]OCC(N)=O ### Response: COc1cc(C[NH2+][C@@H]2C[C@H]3CC[C@]2(C)C3(C)C)ccc1OCC(N)=O
canonicalization
### Instruction: Canonicalize the following SMILES string. C(NC(=O)[C@@]12C([C@@](/C(=N/O)C1=O)(CC2)C)(C)C)(C)C ### Response: CC(C)NC(=O)[C@]12CC[C@](C)(/C(=N/O)C1=O)C2(C)C
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [3*]OCC Fragment 2: [3*]OCC[4*] ### Response: CCOCCO[C@H]1CCN(Cc2cnc3cnccn23)C1
functional_group
### Instruction: Does the molecule contain a aldehyde group? CC(C)=NNC(=O)C(=O)Nc1cccc2ccccc12 ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [9*]n1ccnn1 Fragment 2: [8*]Cn1ccnn1 ### Response: c1cn(C[C@H]2CCC[NH+](Cc3ccoc3)C2)nn1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CS[C@H]1CCC[C@H]1[NH+](C)Cc1noc(Cc2ccccc2)n1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a ether group? O=C(NCc1ccccc1F)c1ccc(N2CCC([NH2+]Cc3nc4ccccc4s3)CC2)cc1 ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [7*]Cc1ccc([16*])cc1 Fragment 2: [1*]C(=O)C[7*] ### Response: COC(=O)c1ccc(/C=C/C(=O)N[C@H]2CCC[C@@H](C)[C@H]2C)cc1
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? COc1ccc(F)c(NC(=O)c2oc(C)cc2C)c1 ### Response: Yes
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccc(N2C(=O)c3cnc4c(c(C)nn4-c4ccccc4C)c3C2=O)cc1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1cc(C)c(NC(=O)c2cc3c(C)nn(-c4ccccc4)c3s2)c(C)n1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*][NH+](C)C Fragment 2: [1*]C(=O)c1cccc([N+](=O)[O-])c1 ### Response: Cc1cc(Cl)cc2sc(N(CCC[NH+](C)C)C(=O)c3cccc([N+](=O)[O-])c3)nc12
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCCNC(=O)c1sc(C)nc1C ### Response: 3
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N[C@]1(C#N)CCC[C@@H]([NH+]([5*])C)C1 Fragment 2: [15*]C1CCCCC1 ### Response: CC(C)N[C@]1(C#N)CCC[C@@H]([NH+](C)C2CCCCC2)C1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. O=C(NCc1ccco1)[C@H]1[NH+]=c2ccccc2=C1Sc1ccc(Cl)cc1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a carboxyl group? C[C@H](CC(=O)Nc1c(F)cccc1Br)c1ccccc1 ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCOC(=O)Cc1csc(NC(=O)c2ccc(C(F)(F)F)cc2)n1 ### Response: 2
ring_counting
### Instruction: Count the five-membered rings in the following molecule. O=C(Nc1ccc(-c2cc[nH]n2)cc1)N1CCC(Oc2ccccc2)CC1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a carboxyl group? CCS(=O)(=O)c1ccc(NC(=O)[C@@H](NC(=O)c2cccs2)C(C)C)cc1 ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@@H]1CCN(C(=O)c2cnc(-c3ccccc3)s2)C[C@@H]1O ### Response: 1
functional_group
### Instruction: Does the molecule contain a hydroxyl group? CCCCn1c(N)c(N(C)C(=O)CSc2ccc(F)cc2)c(=O)[nH]c1=O ### Response: No
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC(C)=C1[C@H]2CC[C@@H]1[C@H]1C(=O)N(NC(=O)COc3ccc(Cl)c(C)c3)C(=O)[C@@H]12 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. N1(C[C@@H]2[NH2+]C[C@H]1C2)c1c(C)cccc1 ### Response: Cc1ccccc1N1C[C@H]2C[C@@H]1C[NH2+]2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1cc2c(cc1OC)CN(C(=O)CCCNC(C)=O)CC2 ### Response: 4
functional_group
### Instruction: Does the molecule contain a phenol group? O=Cc1c(-c2cccnc2)[nH]c2ccccc12 ### Response: No
ring_counting
### Instruction: Count the five-membered rings in the following molecule. C/C(=C/C(=O)N(C)C[C@H]1CC[NH+](C)C1)c1ccc(F)cc1F ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)CS[11*] Fragment 2: [4*]Cc1c(C)nn(C)c1Cl ### Response: Cc1nn(C)c(Cl)c1CSCC(=O)N(C)[C@@H]1CCCc2ccccc21
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? Cc1ccccc1C(=O)Nc1ccc(OCC(=O)[O-])c(-c2nc3ccccc3s2)c1 ### Response: Yes
functional_group
### Instruction: Does the molecule contain a nitrile group? Nc1ccc2nc(N[C@@H]3C[C@H]4CC[C@@H]3C4)oc2c1 ### Response: No
functional_group
### Instruction: Does the molecule contain a thiol group? COc1ccc([C@H](O)[C@@H](C)NC(=O)[C@@H](C)SC)cc1 ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [16*]c1cccc(S(=O)(=O)CC)c1 Fragment 2: [14*]c1noc([14*])n1 ### Response: CCS(=O)(=O)c1cccc(-c2nc(CCOC)no2)c1
canonicalization
### Instruction: Canonicalize the following SMILES string. C1CN([C@H](CNC(=O)NCc2sc(cc2)CC)C(C)C)CC[NH+]1C ### Response: CCc1ccc(CNC(=O)NC[C@H](C(C)C)N2CC[NH+](C)CC2)s1
canonicalization
### Instruction: Canonicalize the following SMILES string. O=C(N1CCCC[C@@H]1[C@H]1C(CCC1)=O)c1cc(C)oc1C ### Response: Cc1cc(C(=O)N2CCCC[C@@H]2[C@@H]2CCCC2=O)c(C)o1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(F)ccc(SCC(N2CCN(C(=O)C3CC3)CC2)=O)cc1 ### Response: O=C(CSc1ccc(F)cc1)N1CCN(C(=O)C2CC2)CC1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccc([C@@H](C)NC(=O)CC[C@@H](C)O)cc1OC ### Response: 5
functional_group
### Instruction: Does the molecule contain a ether group? CCCn1nccc1[C@H]([NH3+])[C@H]1CSCCS1 ### Response: No
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC(C)N(CC(=O)N1C[C@@H](C)O[C@@H](C)C1)c1ccc(F)cc1 ### Response: 2
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cc1ccc(C)c(/C=C2/N=C(c3ccc(Cl)cc3)OC2=O)c1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@@H]1CCCN(C(=O)C(=O)Nc2ccc(C(=O)NCCc3ccccc3)cc2)C1 ### Response: 2
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CNC(=O)c1ccc(CN(C)C(=O)C[C@H](NC(C)=O)c2cccs2)cc1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a carboxyl group? CCOc1ccc(/C=C/C(=O)Oc2ccccc2)cc1OC ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. CCC[C@@H]1CC[C@@H]([C@@H](C1)[NH+]1CC(NCC1)=O)C[NH3+] ### Response: CCC[C@@H]1CC[C@H](C[NH3+])[C@H]([NH+]2CCNC(=O)C2)C1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Nc1cc(C(=O)O[C@H](C(=O)NC2CC2)c2ccccc2)ccc1Cl ### Response: 2
functional_group
### Instruction: Does the molecule contain a ketone group? CC[C@@H](C)n1ncc(C(=O)NNc2ccc(C(F)(F)F)nn2)c1C1CC1 ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@@H](CO)NC(=O)NC[C@H]1Cc2ccccc2O1 ### Response: 3
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N1CCC[C@H]([15*])C1 Fragment 2: [1*]C(=O)CC ### Response: CCC(=O)Nc1cccc(-c2noc([C@H]3CCCN(C(=O)c4ccc(F)cc4)C3)n2)c1
functional_group
### Instruction: Does the molecule contain a ether group? CC1(C)Cc2cccc(OCc3ccc(C(=O)Nc4ccc(S(N)(=O)=O)cc4)cc3)c2O1 ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. O=C(N1[C@@H](Cc2ccccc2C1)C(N)=O)CCC(=O)c1ccccc1 ### Response: NC(=O)[C@@H]1Cc2ccccc2CN1C(=O)CCC(=O)c1ccccc1
canonicalization
### Instruction: Canonicalize the following SMILES string. N1C(=O)[C@@H](N(CC)C(=O)C[C@@H](O)c2ccc(Cl)cc2)CC=1[O-] ### Response: CCN(C(=O)C[C@@H](O)c1ccc(Cl)cc1)[C@H]1CC([O-])=NC1=O
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)C[4*] Fragment 2: [5*]N1CCCC1 ### Response: CC1(C)Cc2nc3oc4c(SCC(=O)N5CCCC5)ncnc4c3cc2CO1
functional_group
### Instruction: Does the molecule contain a amine group? CN(C(=O)CSc1nnc(-c2ccccc2F)o1)c1ccccc1 ### Response: No
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CCO[C@@H]1C[C@@H]([NH+](C)Cc2ccc(-n3cncn3)c(C)c2)C12CCC2 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(C[NH+]2CCC[C@H](C2)CCO)c(c(OC)ccc1)O ### Response: COc1cccc(C[NH+]2CCC[C@@H](CCO)C2)c1O
functional_group
### Instruction: Does the molecule contain a halide group? N#C/C(=C\c1ccc(-c2cc(C(=O)[O-])ccc2Cl)o1)C(=O)N1CCOCC1 ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cc(OCC)c(cc1)[C@@H]1O[C@H]([C@H](C[NH+]2[C@@H](c3[nH]c4cc(ccc4n3)F)CCC2)N1)C ### Response: CCOc1ccccc1[C@H]1N[C@@H](C[NH+]2CCC[C@@H]2c2nc3ccc(F)cc3[nH]2)[C@H](C)O1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1ccccc1CCNC(=O)[C@@H](C)Sc1nnnn1C(C)(C)C ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [15*][C@@H]1C[C@@H]1/C([O-])=N/S(=O)(=O)CCCF Fragment 2: [16*]c1ccccc1 ### Response: O=S(=O)(CCCF)/N=C(\[O-])[C@H]1C[C@H]1c1ccccc1
functional_group
### Instruction: Does the molecule contain a amide group? CCCCC1([C@H]2CC(=O)N(c3ccccc3)C2=O)C(=O)N(c2ccccc2)N(c2ccccc2)C1=O ### Response: Yes
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCOCCOC(=O)Nc1c(C)cccc1CC ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. c1c(C(F)(F)F)cncc1C#N ### Response: N#Cc1cncc(C(F)(F)F)c1
canonicalization
### Instruction: Canonicalize the following SMILES string. C(N1CCN(c2ccc(OC)cc2)CC1)[C@H](c1ccc(cc1)CC)O ### Response: CCc1ccc([C@H](O)CN2CCN(c3ccc(OC)cc3)CC2)cc1
functional_group
### Instruction: Does the molecule contain a ester group? COc1ccc(NCC(=O)Nc2c(C)cc(C)cc2C)cc1OC(F)F ### Response: No
functional_group
### Instruction: Does the molecule contain a sulfonyl group? c1ccc([C@@H](c2ccncc2)c2ccccn2)cc1 ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)c1cc(S(=O)(=O)NC)oc1C Fragment 2: [5*]NCc1cccs1 ### Response: CNS(=O)(=O)c1cc(C(=O)NCc2cccs2)c(C)o1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(C)c1nnc(C2CCN(C(=O)Nc3ccc(Cl)cc3)CC2)o1 ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(=O)[C@@H]1C[C@H](CC(=O)N2CCC3(CC2)NC(=O)c2ccccc2O3)C1(C)C ### Response: 2
canonicalization
### Instruction: Canonicalize the following SMILES string. n1c(-c2ccccc2)nccc1NC([C@@H](NC(=O)OC)C(C)C)=O ### Response: COC(=O)N[C@H](C(=O)Nc1ccnc(-c2ccccc2)n1)C(C)C
canonicalization
### Instruction: Canonicalize the following SMILES string. c12ccccc1cc(S(=O)(=O)N[C@@H]1[C@@H](CCCC1)C([O-])=O)cc2 ### Response: O=C([O-])[C@@H]1CCCC[C@@H]1NS(=O)(=O)c1ccc2ccccc2c1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1cccc(C)c1NC(=O)C[NH+]1CCC[C@H]([C@@H](C)O)C1 ### Response: 2
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)CC[8*] Fragment 2: [7*]Cc1ccc(Cl)cc1 ### Response: O=C(CCc1ccccc1)NCCN1C(=O)S/C(=C\c2ccc(Cl)cc2)C1=O
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Nc1c(N(C(=O)/C=C/c2ccc3c(c2)OCO3)C2CCCC2)c(=O)[nH]c(=O)n1Cc1ccccc1 ### Response: 3
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cccc2c1N[C@](c1ccc(Cl)cc1)(N(CC=C)C2=O)C ### Response: C=CCN1C(=O)c2ccccc2N[C@]1(C)c1ccc(Cl)cc1
canonicalization
### Instruction: Canonicalize the following SMILES string. [C@H](CNC(=O)/C=C/c1ccc(C)o1)(CCO)CC ### Response: CC[C@H](CCO)CNC(=O)/C=C/c1ccc(C)o1