query stringlengths 53 100 | positive listlengths 1 5 | negative listlengths 1 4 | system stringlengths 68 790 |
|---|---|---|---|
What is the biomedical concept corresponding to 'falco rusticolus'? | [
"falco rusticolus (gyrfalcon)",
"gyrfalcon (falco rusticolus)"
] | [
"arhopalus rusticus",
"falco rusticolus obsoletus (falco obsoletus)",
"falco obsoletus (falco rusticolus obsoletus)",
"falco araea (falco araeus)"
] | Given the context 'Natural mortality of ptarmigan was highest during autumn movements and nesting by gyrfalcons Falco rusticolus L. Mortality was low when gyrfalcons had departed for coastal wintering sites, and during summer when ptarmigan were attending nests and broods.', answer the user's query. |
What is the biomedical concept corresponding to 'gyrfalcons'? | [
"gyrfalcon (falco rusticolus)"
] | [
"gyractis",
"gyrocheilus",
"gyraulus",
"gyrocheilos"
] | Given the context 'Natural mortality of ptarmigan was highest during autumn movements and nesting by gyrfalcons Falco rusticolus L. Mortality was low when gyrfalcons had departed for coastal wintering sites, and during summer when ptarmigan were attending nests and broods.', answer the user's query. |
What is the biomedical concept corresponding to 'dendropsophus ebraccatus'? | [
"dendropsophus ebraccatus (hourglass treefrog)",
"hyla ebraccata (dendropsophus ebraccatus)",
"hourglass treefrog (dendropsophus ebraccatus)"
] | [
"colladonus eburatus",
"apirocalus ebrius",
"dendrobates braccatus (ameerega braccata)",
"acanthus ebracteatus"
] | Given the context '2. We reared tadpoles of the Neotropical treefrog Dendropsophus ebraccatus with or without cues from a predator (Belostoma sp.) in ecologically relevant warm or cool temperatures.', answer the user's query. |
What is the biomedical concept corresponding to 'magnaporthe oryzae'? | [
"magnaporthe oryzae (pyricularia oryzae)",
"magnaporthe oryzae b.c. couch, 2002 (pyricularia oryzae)",
"pyricularia oryzae (magnaporthe oryzae b.c. couch, 2002)"
] | [
"monotospora oryzae (nigrospora oryzae)",
"nigrospora oryzae (monotospora oryzae)",
"trematosphaerella oryzae (phaeosphaeria oryzae)",
"phaeosphaeria oryzae (trematosphaerella oryzae)"
] | Given the context 'The transporter diversity of Magnaporthe oryzae.
', answer the user's query. |
What is the biomedical concept corresponding to 'magnaporthe oryzae'? | [
"magnaporthe oryzae (pyricularia oryzae)",
"magnaporthe oryzae b.c. couch, 2002 (pyricularia oryzae)",
"pyricularia oryzae (magnaporthe oryzae b.c. couch, 2002)"
] | [
"monotospora oryzae (nigrospora oryzae)",
"nigrospora oryzae (monotospora oryzae)",
"trematosphaerella oryzae (phaeosphaeria oryzae)",
"phaeosphaeria oryzae (trematosphaerella oryzae)"
] | Given the context 'The genome of Magnaporthe oryzae contains four TRK, one HAK, and two ACU genes.', answer the user's query. |
What is the biomedical concept corresponding to 'rice'? | [
"rice (oryza sativa) (oryza sativa)",
"red rice (oryza sativa)",
"oryza sativa (asian cultivated rice)",
"asian cultivated rice (oryza sativa)"
] | [
"common wild rice (oryza rufipogon)",
"red rice (oryza rufipogon)",
"african rice (oryza glaberrima)",
"ricegrass (oryzopsis)"
] | Given the context 'The study of the expression of these genes at high K(+), K(+) starvation, and in infected rice leaves revealed that the expression of four genes, ACU1, ACU2, HAK1, and TRK1 is much lower than that of TRK2, TRK3, and TRK4, except under K(+) starvation.', answer the user's query. |
What is the biomedical concept corresponding to 'saccharomyces cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'These two ATPases endow Saccharomyces cerevisiae with the capacity to grow for several generations in low Na(+) concentrations when K(+) was absent, which produces a dramatic increase of cellular Na(+)/K(+) ratio.
', answer the user's query. |
What is the biomedical concept corresponding to 'lactococcus lactis'? | [
"lactococcus lactis (streptococcus lactis (lister 1873) lohnis 1909 (approved lists 1980))",
"streptococcus lactis (lister 1873) lohnis 1909 (approved lists 1980) (lactococcus lactis)",
"lactobacillus xylosus (lactococcus lactis)"
] | [
"lactococcus lactis lactis (lactococcus lactis subsp. lactis)",
"lactococcus carnosus",
"lactococcus muris (lactococcus intestinalis)",
"lactococcus intestinalis (lactococcus muris)"
] | Given the context 'Citrate uptake in exchange with intermediates in the citrate metabolic pathway in Lactococcus lactis IL1403.
', answer the user's query. |
What is the biomedical concept corresponding to 'lactococcus lactis'? | [
"lactococcus lactis (streptococcus lactis (lister 1873) lohnis 1909 (approved lists 1980))",
"streptococcus lactis (lister 1873) lohnis 1909 (approved lists 1980) (lactococcus lactis)",
"lactobacillus xylosus (lactococcus lactis)"
] | [
"lactococcus lactis lactis (lactococcus lactis subsp. lactis)",
"lactococcus carnosus",
"lactococcus muris (lactococcus intestinalis)",
"lactococcus intestinalis (lactococcus muris)"
] | Given the context 'Carbohydrate/citrate cometabolism in Lactococcus lactis results in the formation of the flavor compound acetoin.', answer the user's query. |
What is the biomedical concept corresponding to 'l. lactis'? | [
"lactobacillus xylosus (lactococcus lactis)",
"lactococcus lactis (streptococcus lactis (lister 1873) lohnis 1909 (approved lists 1980))",
"streptococcus lactis (lister 1873) lohnis 1909 (approved lists 1980) (lactococcus lactis)"
] | [
"lactococcus lactis lactis (lactococcus lactis subsp. lactis)",
"lactococcus carnosus",
"lactococcus (lactic streptococci)",
"lactic streptococci (lactococcus)"
] | Given the context 'It follows that citrate metabolism in L. lactis IL1403(pFL3) splits up in two routes after the formation of pyruvate, one the well-characterized route yielding acetoin and the other a new route yielding acetate.', answer the user's query. |
What is the biomedical concept corresponding to 'bombus terrestris'? | [
"bombus terrestris (large earth bumblebee)",
"apis terrestris (bombus terrestris)",
"buff-tailed bumblebee (bombus terrestris)",
"large earth bumblebee (bombus terrestris)"
] | [
"bombus borealis",
"bombus jacobsoni (bombus lucorum)",
"bombus montivagus (bombus trifasciatus)",
"bombus xanthopus (bombus terrestris xanthopus)"
] | Given the context 'Pathways to immunity: temporal dynamics of the bumblebee (Bombus terrestris) immune response against a trypanosomal gut parasite.
', answer the user's query. |
What is the biomedical concept corresponding to 'bombus terrestris'? | [
"bombus terrestris (large earth bumblebee)",
"apis terrestris (bombus terrestris)",
"buff-tailed bumblebee (bombus terrestris)",
"large earth bumblebee (bombus terrestris)"
] | [
"bombus borealis",
"bombus jacobsoni (bombus lucorum)",
"bombus montivagus (bombus trifasciatus)",
"bombus xanthopus (bombus terrestris xanthopus)"
] | Given the context 'Using a gene discovery approach, we have identified genes relating to signalling, enzymatic processes and respiration that were up-regulated in the bumblebee, Bombus terrestris, during infection with the trypanosomatid parasite, Crithidia bombi.', answer the user's query. |
What is the biomedical concept corresponding to 'crithidia bombi'? | [
"crithidia bombi"
] | [
"criorhina bomboides",
"bombyx crini (brithys crini)",
"bactrocera tryoni (queensland fruit fly)",
"bactrocera mayi (dacus mayi)"
] | Given the context 'Using a gene discovery approach, we have identified genes relating to signalling, enzymatic processes and respiration that were up-regulated in the bumblebee, Bombus terrestris, during infection with the trypanosomatid parasite, Crithidia bombi.', answer the user's query. |
What is the biomedical concept corresponding to 'c. bombi'? | [
"crithidia bombi"
] | [
"candida bombi (starmerella bombi)",
"batocera parryi (batocera calanus)",
"starmerella bombi (candida bombi)",
"criorhina bomboides"
] | Given the context 'In addition, we have mapped dynamic changes in the temporal expression of these genes and three candidate antimicrobial peptide (AMP) immune genes, Abaecin, Defensin and Hymenoptaecin, from 1 to 24 h after C. bombi infection.', answer the user's query. |
What is the biomedical concept corresponding to 'c. bombi'? | [
"crithidia bombi"
] | [
"candida bombi (starmerella bombi)",
"batocera parryi (batocera calanus)",
"starmerella bombi (candida bombi)",
"criorhina bomboides"
] | Given the context 'We show that dynamic changes in expression occur for individual genes at distinct phases of the immune response to C. bombi that correspond to early, intermediate and late stages of infection.
', answer the user's query. |
What is the biomedical concept corresponding to 'bdellovibrio bacteriovorus'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio bacteriovorus w",
"bdellovibrio bacteriovirus",
"bdellovibrio",
"bdellovibrionia bacterium"
] | Given the context 'Spiral architecture of the nucleoid in Bdellovibrio bacteriovorus.
', answer the user's query. |
What is the biomedical concept corresponding to 'bdellovibrio bacteriovorus'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio bacteriovorus w",
"bdellovibrio bacteriovirus",
"bdellovibrio",
"bdellovibrionia bacterium"
] | Given the context 'We present a cryo-electron tomographic analysis of the three-dimensional architecture of a strain of the Gram-negative bacterium Bdellovibrio bacteriovorus in which endogenous MreB2 was replaced with monomeric teal fluorescent protein (mTFP)-labeled MreB2.', answer the user's query. |
What is the biomedical concept corresponding to 'vibrio cholerae'? | [
"bacillus cholerae (vibrio cholerae)",
"vibrio cholera (vibrio cholerae)",
"vibrio comma (vibrio cholerae)",
"vibrio albensis (vibrio cholerae)",
"vibrio cholerae-asiaticae (vibrio cholerae)"
] | [
"vibrio indicus ('vibrio indicus')",
"vibrio mexicanus",
"vibrio coli (campylobacter coli)",
"vibrio amylolyticus"
] | Given the context 'The three vibrio cholerae chromosome II-encoded ParE toxins degrade chromosome', answer the user's query. |
What is the biomedical concept corresponding to 'vibrio cholerae'? | [
"bacillus cholerae (vibrio cholerae)",
"vibrio cholera (vibrio cholerae)",
"vibrio comma (vibrio cholerae)",
"vibrio albensis (vibrio cholerae)",
"vibrio cholerae-asiaticae (vibrio cholerae)"
] | [
"vibrio indicus ('vibrio indicus')",
"vibrio mexicanus",
"vibrio coli (campylobacter coli)",
"vibrio amylolyticus"
] | Given the context 'Three homologues of the plasmid RK2 ParDE toxin-antitoxin system are present in the Vibrio cholerae genome within the superintegron on chromosome II.', answer the user's query. |
What is the biomedical concept corresponding to 'v. cholerae'? | [
"bacillus cholerae (vibrio cholerae)",
"vibrio cholera (vibrio cholerae)",
"vibrio comma (vibrio cholerae)",
"vibrio albensis (vibrio cholerae)",
"vibrio cholerae-asiaticae (vibrio cholerae)"
] | [
"vibrio septicus (clostridium septicum)",
"vibrio coli (campylobacter coli)",
"vibrio amylolyticus",
"vibrio indicus ('vibrio indicus')"
] | Given the context 'ParE-mediated DNA damage activates the V. cholerae SOS response, which in turn likely accounts for ParE's inhibition of cell division.', answer the user's query. |
What is the biomedical concept corresponding to 'v. cholerae'? | [
"bacillus cholerae (vibrio cholerae)",
"vibrio cholera (vibrio cholerae)",
"vibrio comma (vibrio cholerae)",
"vibrio albensis (vibrio cholerae)",
"vibrio cholerae-asiaticae (vibrio cholerae)"
] | [
"vibrio septicus (clostridium septicum)",
"vibrio coli (campylobacter coli)",
"vibrio amylolyticus",
"vibrio indicus ('vibrio indicus')"
] | Given the context 'Derepression of ParE activity in DeltaparAB2 mutant V. cholerae cells that have lost chromosome II contributes to the prominent DNA degradation that accompanies the death of these cells.', answer the user's query. |
What is the biomedical concept corresponding to 'v. cholerae'? | [
"bacillus cholerae (vibrio cholerae)",
"vibrio cholera (vibrio cholerae)",
"vibrio comma (vibrio cholerae)",
"vibrio albensis (vibrio cholerae)",
"vibrio cholerae-asiaticae (vibrio cholerae)"
] | [
"vibrio septicus (clostridium septicum)",
"vibrio coli (campylobacter coli)",
"vibrio amylolyticus",
"vibrio indicus ('vibrio indicus')"
] | Given the context 'Thus, the parDE loci aid in the maintenance of the integrity of the V. cholerae superintegron and in ensuring the inheritance of chromosome II.
', answer the user's query. |
What is the biomedical concept corresponding to 'bdellovibrio bacteriovorus'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio bacteriovorus w",
"bdellovibrio bacteriovirus",
"bdellovibrio",
"bdellovibrionia bacterium"
] | Given the context 'Three motAB stator gene products in Bdellovibrio bacteriovorus contribute to motility of a single flagellum during predatory and prey-independent growth.
', answer the user's query. |
What is the biomedical concept corresponding to 'bdellovibrio bacteriovorus'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio bacteriovorus w",
"bdellovibrio bacteriovirus",
"bdellovibrio",
"bdellovibrionia bacterium"
] | Given the context 'The predatory bacterium Bdellovibrio bacteriovorus uses flagellar motility to locate regions rich in Gram-negative prey bacteria, colliding and attaching to prey and then ceasing flagellar motility.', answer the user's query. |
What is the biomedical concept corresponding to 'bdellovibrio'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio",
"bdellovibrio bacteriovorus w",
"bdellovibrio bacteriovirus",
"bdellovibrionia"
] | Given the context 'Prey are then invaded to form a "bdelloplast" in a type IV pilus-dependent process, and prey contents are digested, allowing Bdellovibrio growth and septation.', answer the user's query. |
What is the biomedical concept corresponding to 'bdellovibrio'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio",
"bdellovibrio bacteriovorus w",
"bdellovibrio bacteriovirus",
"bdellovibrionia"
] | Given the context 'After septation, Bdellovibrio flagellar motility resumes inside the prey bdelloplast prior to its lysis and escape of Bdellovibrio progeny.', answer the user's query. |
What is the biomedical concept corresponding to 'bdellovibrio'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio",
"bdellovibrio bacteriovorus w",
"bdellovibrio bacteriovirus",
"bdellovibrionia"
] | Given the context 'After septation, Bdellovibrio flagellar motility resumes inside the prey bdelloplast prior to its lysis and escape of Bdellovibrio progeny.', answer the user's query. |
What is the biomedical concept corresponding to 'bdellovibrio'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio",
"bdellovibrio bacteriovorus w",
"bdellovibrio bacteriovirus",
"bdellovibrionia"
] | Given the context 'Bdellovibrio can also grow slowly outside prey as long flagellate host-independent (HI) cells, cultured on peptone-rich media.', answer the user's query. |
What is the biomedical concept corresponding to 'b. bacteriovorus hd100'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio bacteriovorus w",
"bacteriovorax (bacteriolyticum)",
"bacillus amylovorus (erwinia amylovora)",
"bacteriovorax antarcticus"
] | Given the context 'The B. bacteriovorus HD100 genome encodes three pairs of MotAB flagellar motor proteins, each of which could potentially form an inner membrane ion channel, interact with the FliG flagellar rotor ring, and produce flagellar rotation.', answer the user's query. |
What is the biomedical concept corresponding to 'bdellovibrio'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio",
"bdellovibrio bacteriovorus w",
"bdellovibrio bacteriovirus",
"bdellovibrionia"
] | Given the context 'In 2004, Flannagan and coworkers (R. S. Flannagan, M. A. Valvano, and S. F. Koval, Microbiology 150:649-656, 2004) used antisense RNA and green fluorescent protein (GFP) expression to downregulate a single Bdellovibrio motA gene and reported slowed release from the bdelloplast and altered motility of the progeny.', answer the user's query. |
What is the biomedical concept corresponding to 'bdellovibrio'? | [
"bdellovibrio bacteriovorus"
] | [
"bdellovibrio",
"bdellovibrio bacteriovorus w",
"bdellovibrio bacteriovirus",
"bdellovibrionia"
] | Given the context 'Thus, Bdellovibrio is a "dedicated motorist," retaining and expressing three pairs of mot genes.
', answer the user's query. |
What is the biomedical concept corresponding to 'escherichia coli'? | [
"bacterium coli (escherichia coli)",
"e. coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)",
"escherichia coli c"
] | Given the context 'Mapping functional domains of colicin M.
Colicin M (Cma) lyses Escherichia coli cells by inhibiting murein biosynthesis through hydrolysis of the phosphate ester between C(55)-polyisoprenol and N-acetylmuramyl (MurNAc)-pentapeptide-GlcNAc in the periplasm.', answer the user's query. |
What is the biomedical concept corresponding to 'rice'? | [
"rice (oryza sativa) (oryza sativa)",
"red rice (oryza sativa)",
"oryza sativa (asian cultivated rice)",
"asian cultivated rice (oryza sativa)"
] | [
"common wild rice (oryza rufipogon)",
"red rice (oryza rufipogon)",
"african rice (oryza glaberrima)",
"ricegrass (oryzopsis)"
] | Given the context 'OsHMA3, a P1B-type of ATPase affects root-to-shoot cadmium translocation in rice by mediating efflux into vacuoles.
', answer the user's query. |
What is the biomedical concept corresponding to 'rice'? | [
"rice (oryza sativa) (oryza sativa)",
"red rice (oryza sativa)",
"oryza sativa (asian cultivated rice)",
"asian cultivated rice (oryza sativa)"
] | [
"common wild rice (oryza rufipogon)",
"red rice (oryza rufipogon)",
"african rice (oryza glaberrima)",
"ricegrass (oryzopsis)"
] | Given the context 'The cadmium (Cd) over-accumulating rice (Oryza sativa) cv Cho-Ko-Koku was previously shown to have an enhanced rate of root-to-shoot Cd translocation.', answer the user's query. |
What is the biomedical concept corresponding to 'oryza sativa'? | [
"oryza sativa (asian cultivated rice)",
"rice (oryza sativa) (oryza sativa)",
"red rice (oryza sativa)",
"asian cultivated rice (oryza sativa)"
] | [
"oryza",
"common wild rice (oryza rufipogon)",
"oryza officinalis",
"african rice (oryza glaberrima)"
] | Given the context 'The cadmium (Cd) over-accumulating rice (Oryza sativa) cv Cho-Ko-Koku was previously shown to have an enhanced rate of root-to-shoot Cd translocation.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'OsHMA3 fused to green fluorescent protein was localized to vacuolar membranes in plants and yeast.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'An OsHMA3 transgene complemented Cd sensitivity in a yeast mutant that lacks the ability to transport Cd into vacuoles.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'By contrast, OsHMA3mc did not complement the Cd sensitivity of this yeast mutant, indicating that the OsHMA3mc transport function was lost.', answer the user's query. |
What is the biomedical concept corresponding to 'rice plants'? | [
"rice (oryza sativa) (oryza sativa)",
"red rice (oryza sativa)",
"oryza sativa (asian cultivated rice)",
"asian cultivated rice (oryza sativa)"
] | [
"ricegrass (oryzopsis)",
"red rice (oryza rufipogon)",
"common wild rice (oryza rufipogon)",
"african rice (oryza glaberrima)"
] | Given the context 'We propose that the root cell cytoplasm of Cd-overaccumulating rice plants has more Cd available for loading into the xylem as a result of the lack of OsHMA3-mediated transportation of Cd to the vacuoles.', answer the user's query. |
What is the biomedical concept corresponding to 'rice'? | [
"rice (oryza sativa) (oryza sativa)",
"red rice (oryza sativa)",
"oryza sativa (asian cultivated rice)",
"asian cultivated rice (oryza sativa)"
] | [
"common wild rice (oryza rufipogon)",
"red rice (oryza rufipogon)",
"african rice (oryza glaberrima)",
"ricegrass (oryzopsis)"
] | Given the context 'These data demonstrate the importance of vacuolar sequestration for Cd accumulation in rice.
', answer the user's query. |
What is the biomedical concept corresponding to 'salmonella enterica'? | [
"salmonella choleraesuis (salmonella enterica)",
"salmonella cholerae-suis (salmonella enterica)",
"salmonella enterica (salmonella enterica ser. choleraesuis)"
] | [
"salmonella",
"salmonella enteritidis (salmonella enterica subsp. enterica serovar enteritidis)",
"salmonella typhimurium (salmonella enterica subsp. enterica serovar typhimurium)",
"salmonella typhi (salmonella enterica subsp. enterica serovar typhi)"
] | Given the context 'FAD binding by ApbE protein from Salmonella enterica: a new class of FAD-binding proteins.
', answer the user's query. |
What is the biomedical concept corresponding to 'escherichia coli'? | [
"bacterium coli (escherichia coli)",
"e. coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)",
"escherichia coli c"
] | Given the context 'Functional and phylogenetic analysis of ureD in Shiga toxin-producing Escherichia coli.
', answer the user's query. |
What is the biomedical concept corresponding to 'escherichia coli'? | [
"bacterium coli (escherichia coli)",
"e. coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)",
"escherichia coli c"
] | Given the context 'Enterohemorrhagic Escherichia coli (EHEC) is a food-borne pathogen that can cause severe health complications and utilizes a much lower infectious dose than other E. coli pathotypes.', answer the user's query. |
What is the biomedical concept corresponding to 'ehec'? | [
"e. coli (escherichia coli)",
"enterococcus coli (escherichia coli)"
] | [
"entamoeba coli",
"enteromonas hominis",
"enterovirus e (bev (enterovirus e))",
"escherichia coli o157"
] | Given the context 'Enterohemorrhagic Escherichia coli (EHEC) is a food-borne pathogen that can cause severe health complications and utilizes a much lower infectious dose than other E. coli pathotypes.', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"entamoeba coli",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'Enterohemorrhagic Escherichia coli (EHEC) is a food-borne pathogen that can cause severe health complications and utilizes a much lower infectious dose than other E. coli pathotypes.', answer the user's query. |
What is the biomedical concept corresponding to 'ehec'? | [
"e. coli (escherichia coli)",
"enterococcus coli (escherichia coli)"
] | [
"entamoeba coli",
"enteromonas hominis",
"enterovirus e (bev (enterovirus e))",
"escherichia coli o157"
] | Given the context 'Despite having an intact ure locus, ureDABCEFG, the majority of EHEC strains are phenotypically urease negative under tested conditions.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'Urease activity potentially assists with survival fitness by enhancing acid tolerance during passage through the stomach or by aiding with colonization in either human or animal reservoirs.', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"entamoeba coli",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'Multilocus sequence typing analysis for a variety of Shiga toxin-producing E. coli isolates combined with the ureD sequence reveals that except for a subset of the O157:H7 strains, neither the in vitro urease-positive phenotype nor the ureD sequence is phylogenetically restricted.
', answer the user's query. |
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