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[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PDLIM2 COTL1 ARHGAP25 BASP1 MAML2 AC079209.1 FAM107B INTS9 HECW2 PLEKHO1 PVT1 AC022217.3 HIVEP3 ETS1 IQSEC1 LMNA SFXN5 CEP170 ETV6 ZMIZ1 NAA50 PLCL1 MARK4 C5ORF66 SARAF TRPV2 TSPAN14 EXTL3 MAD1L1 LAPTM4A DNAJB12 VMP1 ANTXR2 SEMA4D ZNF143 OTUD7B CMKLR1 RHOBTB1 ZBED5-AS1 PTGER2 ATXN1 RASSF5 FRMD4A SCFD2 VIM-AS1 NFE2L2 CYTH4 ARAF SLC13A3 ERCC1 XYLT1 RNF149 SF3B5 KMT2C RUBCNL AC118757.1 RBM19 AC079313.2 NPC1 GK MKNK1 SVIL UNC13D AL356275.1 TG DPH3 NETO2 LINC00237 LIMD1 SYNJ2 AL450992.1 TM2D2 DIAPH1 IFNGR1 FAM117A STK10 CRTC3-AS1 JARID2 CFAP61 HIST1H4K FLI1 AK9 CCNT2-AS1 FAM49A TRPS1 DCUN1D4 AL390957.1 GPCPD1 FBXL19 ATOX1 LY9 HDAC4 HACD2 FCGR2A CASP9 EIF4G1 SMIM2-AS1 ARID5B FOXP1 PDP2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CHST11 RAD51B XYLT1 IL1B ZNF365 FOXO3 MBP VMP1 PTPRE CELF2 CORO1C ARHGAP26 TG PTPRC CPQ PLEKHA7 SEPT9 ST3GAL1 LYN PATL2 SMAD3 HAVCR2 PIK3R5 RREB1 MEF2C RPS9 AC024909.1 AC090559.1 KLF13 IFNGR2 PLAU RASA3 B4GALT1 SGK3 MIR29B2CHG LINC01127 THRAP3 GRK6 AL133523.1 KCTD12 ETV6 TMEM273 PRKCH JMJD1C FAM107B LIPA AC024909.2 CAST PIM1 AL138720.1 FAR2 AC007991.3 SSBP3 AC078923.1 TIMP2 EPHB2 CYP1B1-AS1 AKAP13 THG1L KDM7A HNRNPUL2-BSCL2 ZEB2 LRRC8C HIVEP3 AC009226.1 PNKP ERGIC1 ARHGAP25 CYTIP UBE2Q1 NDUFA10 L3MBTL3 ZMIZ1 NFKBIA IL4I1 CD180 UBE2D3 CUBN MAPKAP1 HBP1 AL138752.2 CFLAR UBAC2 RPS6KA1 CARS2 PGS1 CLEC7A STAM2 RUBCNL AC076966.1 RARA KLF9 KLHL6 TM9SF4 AC079313.2 DCAF1 H3F3B GLS ARFGAP2 MORC2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ANKRD44 FOXP1 LINC01588 FOXN3 PVT1 PRKCH BCL11B TSPAN14 AKAP13 CDH23 LINC00598 CCDC88C RIPOR2 TGFBR2 STIM1 TIAM1 UBAC2 VAV3 C15ORF53 AC016831.7 DOCK10 BACH2 ST3GAL1 LCP1 AC009126.1 CELF2 NCK2 SIN3A ATXN1 ELF1 SEPT9 LIPA PCGF5 LEF1 AOAH RUNX1 HIVEP2 FAM117A KLF13 CD82 EPC1 ETS1 TRAJ28 MYH9 ARHGDIB BCR RASSF3 SNTB1 ELMO1 STK17B HECW2 IKZF1 IQSEC1 SEMA4D RIN3 LINC00861 CD247 ATG5 PRKCA DRAIC RORA IMMP2L FYN LDLRAD4 MXI1 CYTIP STAT1 TTC33 TXNRD1 GPR68 CASP9 LBH PITPNC1 TRABD2A CARS2 AC022126.1 ZCCHC2 ARID5B ACOXL FAM69A RPTOR PHF19 TBC1D5 SUPT3H AC093423.3 SOD2 TG ITGA6 SH3BP5 PLEC AC020743.2 ARHGAP15 LPP MIR3681HG PPP2R5C TCF7 LINC01934 G3BP2 LPXN PIP4K2A\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AC016831.7 FRY ATXN1 AC024909.1 PTPRE JARID2 TRPS1 ETV6 MBP RUNX1 ELF1 AL359736.1 ARHGAP26 DSE ACTB SIN3A NEAT1 CCDC122 STK10 RIN3 CFLAR ST3GAL1 MAP3K14 ELMO1 PFKFB4 JOSD1 LMNA PPP1R18 EIPR1 LRRC8C RUBCNL AL390957.1 AC079313.2 ARHGAP22 PIK3R5 PTPRJ LIPA ASCC1 SLC25A37 RASGEF1B SLC35F2 AC011511.2 CPQ AC022826.2 KLF9 DAGLB NCOR2 LCP1 RAB27A CCDC146 CELF2 GNAI2 CYTH4 AC007192.2 PTK2B AL138720.1 LINC02384 ST8SIA4 FKBP7 AC117834.1 TBXAS1 MAML2 AL139383.1 FLOT1 PRKCH CYTIP RAD51B EMILIN2 MSN LINC01003 GAS7 ARID5B NCAPH2 LINC01136 KIF22 MYO18A CDH23 RAPGEF1 EDEM2 MAP2K3 BCLAF1 IL1B SVIL ANKRD44 PDE4B TEX41 SPECC1 CYSTM1 DLG4 ETF1 LDLRAD4 SPIDR ZFAT UBE2L5 TSPAN14 SEC24D CCR2 PPP2R5C ARID3A KAT6A\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: TBC1D2B SERINC5 AK6 AC016831.7 ALCAM ARHGAP26 MEF2C NBDY ARHGAP10 GNAI2 RHOBTB3 DUSP23 CIITA RUNX1 FBXW7 VOPP1 MGAM SGK1 ATP8B4 ZNF254 AC079313.2 LOXL2 AF241726.2 CDCP1 RBM23 GATAD2B MYCBP2 AL023755.1 POU2F1 TAGLN2 KDM7A ALOX5AP CD74 FOXP1 PIR CFAP161 SLC15A3 SEC31A BTD LINC02321 WASF2 IRF2 IL1RAP DENND3 SH2B2 CDK14 ZNF710 JAK2 PPP2R5C RELB ISG20 DPYSL2 KANTR ACVR1 TMEM18 BCLAF1 LINC01358 H3F3B LINC02068 TNFAIP2 NBPF11 CARD19 AL078590.2 CRTC3-AS1 FNDC3B SLC10A7 TTC7A ARF4 IL6R MKKS HDAC2 ELMSAN1 DOCK10 ESYT2 SUMF1 CPQ GPA33 LMO7DN HIPK2 WDR89 NUBP1 DSE AC019197.1 AKAP13 STXBP5-AS1 DNAJC15 FSIP1 TMEM154 AC078850.1 CRBN LHFPL2 LPP TRPS1 LAP3 DOCK5 SLC27A5 AC008105.3 CCNA2 ACSL5 CCNT2-AS1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 SMAD3 ZMIZ1 AC016831.7 NEAT1 ANKRD33B PRKAG2 STAG2 RPTOR MIR29B2CHG LINC01588 SEPT9 LYN TSPAN14 GALNT2 MAGT1 FOXN3 ABTB2 IRAK2 MAML2 BCOR TNFAIP8 DOCK4 FOXP1 FOXP3 NFKB1 MGLL MSN TMEM131L ZC3H12D CDK6 FOXK1 ST8SIA4 SNX29 PHLDA2 SH3KBP1 P2RY8 ELMO1 AC079313.2 ATG5 VMP1 ATOX1 RAD51B PHF19 AC007991.3 ETV6 CFLAR FLNA ANKRD55 DNAI2 MAML3 DST POLK UBAC2 LITAF KDM2B SPATA24 BRWD3 STARD4 FMNL2 GPR107 RASSF4 AC009126.1 PPCDC NUDCD2 IQGAP2 IKZF1 ZFP36 MAP3K11 TNFRSF1A RBPJ KIF2A CUEDC2 FNBP1 ITPKB ZMYM2 STK17B MSI2 AC022217.3 FAM208B MALAT1 ARID5B CDV3 CHST11 SYNJ2 USP3 PTK2B RPS6KA2 FRMD4A PATL2 CLNK CYTH1 HIPK2 MICAL2 NHSL2 PARP8 FMN1 AP3M2 IQCD AC107871.2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 LPP RUNX1 PRKAG2 ZMIZ1 RAPGEF1 IL1B ITPR1 AKAP13 DNM2 FLI1 ZNF365 CMIP MCF2L2 AC024909.1 MBP ASAP1 SLC11A1 PDE4B AL138720.1 SEPT9 AC016831.7 TTC7A ETV6 RIN3 DOCK10 CYTH1 GPR68 RB1 LIPC GSN LYN LRRFIP1 MICAL2 TNFAIP8 ERCC1 PTK2B N4BP1 TBC1D2B PTPRE CACNA1C CELF2 POLR1A RFX3 KLF13 INPP5A RASA3 SLC2A1 SYNJ2 XYLT1 GSE1 GFOD1 DRAIC RBPJ AC069368.1 CHD9 PRKCH PIK3R1 B4GALT1 AC022182.1 PTPRJ MAD1L1 SMAD3 ZMYND8 AC079313.2 CASS4 NSMCE2 DNAJB5 EXTL3 ARNTL AC024909.2 FOXN3 DLGAP1 RAB11FIP1 UBASH3B AC009226.1 LINC01135 DOCK2 SLC1A2 AC005726.1 PGD LIPA CD82 RBMS1 TRABD2A CHST11 PIK3R5 SLC29A3 ATG5 ALOX5AP SLC9A9 FOXP1 DST DOCK8 FAM49B AC090559.1 SFMBT2 PGS1 TSPAN14 USP3\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 ARHGAP26 KLF13 AC016831.7 UBAC2 AHR IKZF1 PIP4K2A CHST11 CDC42SE2 ANKRD44 PRKCH TSPOAP1 FOXO3 SEMA4D ATXN1 DOCK10 RPTOR FOXP1 MAML2 STK10 SEC22C CCND3 RAPGEF1 PATL2 AL390957.1 SERINC5 SYTL3 TXNRD1 IL7R SERTAD2 CELF2 CYTIP JMJD1C MBP BCL2 XYLT1 BACH2 RIPOR2 ZMIZ1 GPR68 FYN AC069368.1 GRK5 ARHGAP15 ATXN7L1 GPRIN3 PLXNC1 ELF1 MACF1 ETV6 INPP4A ABHD15-AS1 ATG5 CPOX TECR CCDC69 KLF6 PREX1 GPBP1 AKNA PRKAG2 AC068896.1 NFATC2 HDAC4 CROCC CDC14A RASSF3 ZNF365 RIN3 MAST4 BHLHE40-AS1 FAM107B MGAT5 AL359736.1 TYW1B ASAP1 RAD51B WWOX AC079313.2 MYH9 FAM129A FMN1 TTC33 ARID5B CACNA1C INPP4B FYB1 SVIL NOL4L SUSD6 IQGAP2 DUSP10 MTF2 ALOX5AP ITPR1 RUNX3 CDH23 PDE4B LINC00598\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: LPP AL138720.1 ATG5 FMNL2 COTL1 RUNX1 ASAP1 ZMIZ1 ATXN1 CDH23 ARHGAP18 LIPA LINC01588 ETV6 AL109615.3 AC024909.1 ELL GPR68 GSE1 OGG1 KLF13 UXS1 PSD3 AL157871.4 ELMO1 CDCP1 PAG1 CHST11 PTK2B MAP3K3 CACNA1C Z84488.2 MAMSTR AC069368.1 HECW2 NUMA1 CMKLR1 RPS6KA5 LYN TMCC3 MYO9B MEX3C MAP3K5 STX11 INPP5D FOXN3 ZMIZ1-AS1 AC008764.1 DENND1A CPQ EVL SH2D3C CPVL DGLUCY ANKRD11 NFE2L2 PITPNC1 CMIP TG DENND3 IRF2 ST3GAL2 PJA2 PPM1H IL4I1 ARHGAP26 CCDC88C TNIP1 SH3RF3 TPRG1-AS1 DOCK1 TSPOAP1 SERINC5 FAM174B LINC02452 FARS2 SOD2 GCA HDAC4 TSPAN14 G2E3 RBMS1 ANAPC15 AC068896.1 EPC2 LINC01934 AC010894.3 ZHX1-C8ORF76 TTC39C FAM234B IL1B TLE3 STAT1 FYB1 RARA ABCG1 ENC1 ST8SIA4 RAB8A CYTIP\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 MBP AC016831.7 FYN HIVEP3 RUNX1 CCDC88C ATXN1 ARHGAP25 RIN3 CPOX CELF2 MBNL1 LINC01588 TNIP1 PRKAG2 EVL FAM107B IKZF1 BCL2 HDAC4 SEPT9 RASA3 ZMIZ1 FOXP1 AC068896.1 CYTIP PRKCQ SEMA4D TSPOAP1 POLR1A PREX1 LFNG ACTN4 BCL9L TGFBR3 PATL2 CDC42SE2 UBAC2 ATG5 RAPGEF1 ASAP1 RUNX3 ANKMY1 TMEM143 CCDC69 MTO1 STAT1 AL390066.1 ADCY7 CHST11 CUBN LINC01934 STK10 FOXN3 AL450998.2 STK17B STIM1 IL32 RIPOR2 ATXN7L1 FBRS TSPAN14 CYTH1 PRKCH CASP8 SKI BHLHE40-AS1 IQCG HOOK2 NFATC2 ARHGAP15 LPP RAD51B SIK3 ELMO1 ETS1 GSK3B ITPR1 TRABD2A TNFAIP8 MAP3K3 LCP2 OSBPL3 GAS7 NRL DNMT3A RB1 CFLAR SEC22C NEAT1 ACOXL CD82 TSPAN2 LDLRAD4 P2RY8 DNM2 LINC01358 ANKRD44 MIR3681HG\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: UBAC2 MAP3K3 LPP FKBP5 FOXP1 SERTAD2 SESN1 L3HYPDH MBOAT7 CCND3 ANKRD44 UTRN AC015819.1 ST6GAL1 AC069368.1 C3ORF58 GAS7 CRTC3-AS1 CASP8 FBRS RUNX1 PMEL AC016831.7 ARF4 RAPGEF1 TGFB1 ASAP1 ABHD2 UBALD2 MTO1 CAB39L NCOR2 PBXIP1 GATAD2A ARHGAP26 METTL9 MLLT3 GSN NLRC5 LRCH1 GCA EGR2 AL359736.1 DOCK10 CHCHD4 ARID5B PIK3R5 TSPOAP1 WDR89 RTN4 TIAM1 NPAT STAT6 TLR1 QKI SYNJ2 DAGLA PJA2 MAP4K4 CD8A PRTFDC1 SETBP1 ETF1 RIPOR2 CDKN1A ELL AC079313.2 COTL1 CACUL1 LYRM4 BACH2 HNRNPC RASA2 SSBP3 ADCK2 AKAP13 STIP1 CNOT3 AC008438.1 LPCAT1 SKI AC087239.1 C2ORF42 TMEM245 ARHGEF3 DNAJB12 BCL6 EXOC3 GLS RUNX3 DUS2 SEC31A TRG-AS1 ZMIZ1 PAG1 LDLRAD4 N4BP1 UXS1 ARHGAP10 PCGF2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ZFHX3 CHST11 LCP1 ZNF217 BCL2 VOPP1 XYLT1 AMZ1 ANKRD11 GAS7 SLX4IP AMN1 IL16 SLC38A2 DOCK10 OSBPL3 AL390957.1 EEPD1 AGTPBP1 MCF2L2 MAML3 EHD1 RAC1 GNAQ PRKAG2 DAGLB VRK2 ADM CDC42SE2 TBXAS1 RASSF5 HERPUD1 TNIP1 FBXL19 ST6GAL1 STIM1 AC069368.1 ZFP36 SLC35C2 KLF9 AC068896.1 MXD1 TFEB PVT1 SDR42E2 LPP MKKS IL1RAP MYO1E ADAP2 CLMN AL138752.2 LAMTOR4 SNX29 IL2RA MGAT5 GTF3C1 AHR CTSB ARHGAP26 ELMSAN1 TLE3 FYN IER5 RRAS CCDC88C KHNYN IRS2 AC099552.3 ARGLU1 LINC01400 NEAT1 PLEKHA1 RGS12 HDAC4 SAMSN1 CARS2 UFSP1 ETV6 C2ORF76 TMEM53 N4BP1 CBX5 CD83 KDM2A MOB3A EMILIN2 CFLAR HDAC7 FAM214B BACH1 CCNYL1 THG1L CCT8 LYN TMIGD3 IL4I1 LINC01135 NUAK2 AL109615.3\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ATP8A1 PMEL THUMPD3-AS1 LDLRAD4 ASAP1 NABP1 ARHGAP26 STK10 AC024909.1 SGK1 MCF2L2 TG PHLDA1 TBC1D5 CHST11 HECW2 FZD1 AC079313.2 ETV6 SH3BP5 PECAM1 TNIP1 DCP2 ZC3H12D XPOT AC010542.3 ZEB2 ACVR1B IQCD SLC6A6 NRROS OXSR1 SNAI3-AS1 EEF1G AHNAK KIAA0930 SCARF1 LYSMD2 AC024909.2 RPS12 AC007923.4 C5ORF66 MSL2 FCHSD2 ZFC3H1 YWHAZ ATR RHOBTB3 SMG9 XRCC3 PNPLA8 CNOT1 GRN AC084200.1 ATXN1 RHOF PVT1 CYTH4 MIR3681HG BTBD11 CFAP61 DOCK8 LCP2 AC016831.7 SDR42E2 POU2F2 MDM1 PITPNC1 HJURP KLF9 RIPOR1 AL355512.1 SCAF11 AC063949.2 HAVCR2 TMEM216 CRTC3 UBA3 NCAPH2 GNB1 MREG DLGAP1 GASAL1 NMNAT2 MEF2D PLRG1 PRKAR2B AMZ1 NUDCD2 ARHGAP10 MTPN HIVEP1 FAM192A PRRC2A FOXP1 CDK14 TFE3 SLCO3A1 ZNF394 CRADD\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AL359710.1 DOCK10 RB1 PPP2R5A SEMA4D MAP3K5 TSPOAP1 MICAL2 CMIP MBP OGDH FOXP1 KLF10 RARA LYST RAPGEF1 IKZF1 CEMIP2 LPP ELK3 EXOC6 STAT6 CRACR2A SGTA DOCK2 CHST11 AKAP13 GPR68 RAD51B CEP350 ATG5 LINC01431 AL591885.1 GSTO1 EVL RABEP2 RFX3 ARL4C ELF2 SYNJ2 PVT1 GNG2 ATAD2 EXOC4 PER1 MB21D2 FNIP2 NOTCH1 PTPRE HNRNPH1 AKNA PHF10 TRERF1 INPP4A RAD9A SDR42E2 CBX7 KSR1 USP36 ATXN1 SOD2 SETD3 SGMS1 POLR3A DOCK4 AL138720.1 LAPTM5 DEGS1 ZNRF2 LONRF1 PRRC2B JSRP1 AC009226.1 PRKCB ADCK5 ACTB TNFSF8 AC020743.2 RMND1 U2AF2 HLA-DMA SELPLG AC011481.2 IRF2 PTTG1IP UBA1 PTK2B AC104109.3 ANTXR2 RRM2B DLGAP2 ZNF140 PRKAR1B ALAD KLF9 MX2 INPP5D NIN PTPRC HIBCH\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 ARHGAP26 FOXP1 PRKCH RIN3 ETS1 BCL11B CCDC88C ANKRD44 SEPT9 UBAC2 IKZF1 CARS2 LINC01588 MAML2 TNFAIP8 CELF2 SEMA4D ARID5B AL357060.1 CDH23 CDC42SE2 SNTB1 FYN KLF13 IQSEC1 AP000311.1 PTP4A2 ATF7IP ARID1B AKNA PITPNC1 KLF12 PIP4K2A DOCK10 AKAP13 TIAM1 SEC22C RPS6KA2 ARSG ZBTB20 AC010894.3 DNAH2 ST6GAL1 LRRFIP1 LIPA C15ORF53 FAM107B RAPGEF1 AC068896.1 CCSER2 CCND3 NFATC2 ABLIM1 GASAL1 EPC2 TNIK TGFBR2 PTPRC RPTOR TRPS1 CABIN1 RB1 ERCC1 DRAIC FOXN3 BCL2 MAD1L1 PLXNC1 ST8SIA4 FYB1 RBMS1 APBA2 NCK2 BACH2 BCAR3 ITK PDE4B PPM1B ST8SIA1 AOAH HECA PRKCA GNGT2 LINC00598 MAP2K3 SUN1 FAM118A KLHL32 CD247 HIVEP2 PPP3CA PRPF40A RPS6KA5 AP000787.1 PATL2 KAT6B PTPRN2 LEF1 DUS2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: LRRFIP1 ERCC1 CD99 H2AFY TBC1D1 CHST11 SEMA4D C16ORF45 MRC2 TTC7A MRPL39 RPS29 LINC01484 C3ORF58 TTC33 GYS1 RALGDS ZDHHC7 ABCA1 ANXA5 ASB2 NDUFC1 CPPED1 FKBP15 ARFGEF2 SERTAD2 PPTC7 SRSF5 EIF3A RPL13A PRKCE VPS37C KSR1 PREX1 AL157911.1 BTBD2 PDE2A PACSIN2 KLF6 ATXN1 ARID5B KANK1 PRELID1 PISD KLF9 GSE1 SH2B3 SYK LINC01588 PITPNC1 PDGFC MGLL ETV6 TMEM245 ANKRD44 AMN1 SEMA4B UST FAM19A2 GCNT2 ANKRD40 SETD3 MKNK1 LINC01623 CD300LB TRIM25 FLOT1 UBE2K CLRN3 EAPP AL163932.1 PNKP AL121758.1 PPM1K SDF2L1 ERBB3 INTS13 ICE1 INPP4A MIR29B2CHG CLMN PTP4A2 DOCK8 GGA2 ABR LINC01704 CXCL8 TNNI2 NEIL2 AC005775.1 NAA30 GSR ZBTB45 STAT5B SHMT1 LRP8 LINC01135 POGK CNIH1 MUL1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 ETV6 LPP INPP4A ASAP1 ZMIZ1 MED12L RAPGEF1 MYOF MEF2A MBNL1 CDH23 ANKRD44 ITPR2 TNFAIP8 GLS DOCK10 PLEK CYTIP CPQ SBNO1 AKAP13 ZNF365 XPOT PTPRE CIITA NGLY1 PLEC NR3C1 PIP4K2A MCF2L2 MYO1E P2RX7 AC012368.1 ZC3H10 JMJD1C AL138720.1 MTHFD2L PATL2 ATXN7 GPR68 SLC13A3 REV1 USP3 NCOR2 APOL2 ZNF25 TMEM131L ALDH1A2 IQSEC1 BCL9L LINC01127 CSRNP1 IQGAP2 ZHX1-C8ORF76 CFLAR PTPRJ SH3BP2 ANKRD22 VMP1 CARD19 TPRG1-AS1 STIM1 FNDC3B DPYSL2 THADA PACSIN2 AC090527.2 NAMPT STK10 HSPD1 SLC39A10 CD300LB LINC01135 AC016907.2 ATF6 LINC01588 AC008592.4 FER ELMO1 KCTD6 AC078923.1 RIPOR1 STK24 RPL36 ZNF487 STAT1 MIR155HG TTC7A SNX8 AC116366.3 CORO1C AL158835.1 SERPINE1 ILDR1 ZNF131 TRIB1 NEMP1 TIPIN FYB1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AC009226.1 AC006369.1 ARF4 LINC02068 AC011747.2 CHST11 STK10 EBAG9 NRCAM THAP1 ARHGEF3 CORO1C CDKN3 WARS CRACR2A MMADHC ETV6 ADAMTSL4 RAD9A COTL1 FAM49A AC079313.2 LINC00299 TFG ACTR2 SIN3A SGK1 PTPRE FLOT1 GXYLT1 FNDC3B PARP12 TRABD2A AL513283.1 ATP6V1B2 CAPN10 DYRK4 AL139246.3 PLEK PLEC ATP6V1E2 OTUD6B-AS1 MAP3K20 SEC24C STT3A-AS1 AC008629.1 PSMD1 SPIDR TDP2 CDKN1B LMF2 ATP1B1 CDKN1A CNOT3 LARP1B AL157871.4 MOB3B GRK3 DYNC2H1 AC004922.1 ABI1 ZBTB20 ZNF708 TMEM67 LINC01023 ANKMY1 JAML SSBP2 TRAPPC3 ZHX3 PRRC2C MPP7 TTC32 UGGT1 SYMPK PPP2R5C RPS9 CREB3L2 IL16 AL158152.2 AL450998.2 AP000797.3 LINC01800 EPM2AIP1 ARL2-SNX15 ITPR1 AC090559.1 PPARG GAB1 FAM178B ZADH2 TMTC2 STXBP5-AS1 TLCD2 RFWD3 CR786580.1 HLA-E SCAMP3 ATP6V1D EGR1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 AKAP13 SEPT9 PTPRJ RAD51B MBOAT7 CCND3 RARA PFKFB3 MBP ANKRD44 MAML3 FOXP1 HIVEP3 ZMIZ1 C19ORF54 EVL ADAMTSL4 CHST11 IL16 SUSD6 FLI1 TCF7 TG FOXN3 AC024909.2 ASAP1 ERCC1 ATXN7L1 GAS7 MAML2 LYN ARHGAP10 STIM1 MYEOV SIK3 ELMO1 RRBP1 MAP3K5 IFNGR2 MYH9 ZMIZ1-AS1 LPP CD58 LINC01135 RPTOR RIN3 IQSEC1 LINC01353 CMIP PPM1K ETV6 STK40 RBPJ LINC00598 STN1 PREX1 AC068896.1 LPXN CRADD MTO1 AC016831.7 JMJD1C CIITA ARMH4 TRIO RBM15-AS1 LINC01358 RPS6KA5 PRKCH PTGER2 RAPGEF1 SNX29 SMG7 RHOF IQGAP2 NFE2L2 SGMS1 PCCA LTBP4 SLC35F2 LCP2 DIAPH1 NSMCE2 IGFLR1 FGGY AC024909.1 ETS2 HIVEP2 GATAD2A C1ORF112 METTL9 ELL AC079313.2 WDR1 CASS4 AP000311.1 FAM117A LHFPL2 PTK2B\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: NEAT1 STK10 AC016831.7 HDAC4 RUNX1 ETV6 KLF13 ZNF365 LPP RAPGEF1 CHST11 SETBP1 HIVEP3 DNAH2 TNFAIP8 DOCK10 STK24 ZFP36 AKAP13 AC079313.2 ITPKB RASGEF1B KLF6 LITAF PLEC PRKAG2 RXRA AL138720.1 ATXN1 HOOK2 ARHGAP26 BCL6 UBAC2 N4BP1 PATL2 IQSEC1 STAT1 B4GALT1 PDE4B NEDD9 SEPT9 RIPOR2 AL359710.1 PLXNC1 MALAT1 ASAP1 CELF2 RHOBTB3 ACTB ARHGAP31 PARVB FAM107B RFTN1 CPQ IQGAP2 LDLRAD4 ENSA ST8SIA4 CDV3 PKM ARID5B EPC2 LCP1 PLEK IRF5 ANKRD11 PNKP AL138752.2 PIK3AP1 LINC02356 CTIF CD83 SFMBT2 TXN KLF9 GLS UBE2D3 NR4A2 RAC2 SGK1 RASA3 AC008105.3 ABR ANKRD44 FOXN3 TNS3 CCNT2-AS1 AC069368.1 ZC3HAV1 FAM234B ATG5 ELL MCF2L2 PIK3R5 RPS6KA1 AC098613.1 MBP BCL2 SLC1A2 DSE\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 MBP CDH23 RIN3 PTPRE DRAIC CTIF TRGV10 LYN TIAM1 WNK1 ANXA2 SMG7 LPP MBNL1 KMO AL136961.1 VRK2 ANXA11 MYO1E RFTN1 LIMD1 AKAP13 IQCD LIPC KANSL1L STK24 LINC02205 TRIP11 FILNC1 NEAT1 FOXN3 BHLHE40-AS1 RALGDS AC008440.1 ZMIZ1 INTS6 AC012560.1 NFIA MIR29B2CHG PLEK HBP1 PLXDC2 ZFC3H1 LSM14B SRGAP3 AL158152.2 LPXN TMEM154 ELMSAN1 DDX60L PLEKHB2 GPR68 IL6R AL138752.2 TNFAIP8 EXOC3L1 TGFBR2 NFKBIA AL137005.1 QKI ZNF365 NLRP3 RABGAP1 MAML3 RGL1 AL390036.1 ST3GAL2 TNS3 MYOF FPR3 KDM2B MOB3B FARS2 TCF12 ALDH1A2 RALBP1 ATXN7L1 CCNB2 GSK3B TPK1 C19ORF54 UBE2E1 SEH1L TPCN2 STXBP5-AS1 NCEH1 TGM2 AL034549.1 ESR1 ARHGAP25 ADPRH CYSTM1 NEMP1 UNC45A LINC01787 ZNF687 SELPLG NAV1 SVIL\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ATXN1 CHST11 VMP1 AC063949.2 IGF1R ETV6 AKAP13 WDR1 CELF2 ITPKB PLCL1 RUNX1 DEPDC4 MGAT1 PRKAG2 IWS1 RIPOR2 DOCK10 REV3L DST SLC15A4 AKNA SERBP1 AC099518.3 ATP8B4 MGAT5 ZNF365 AC007388.1 TMEM60 CAMK1G DENND1A EDEM3 CYTIP AC010894.3 C4ORF46 NAV2 RFTN1 LIPA APLP2 RIN3 ARHGAP25 MIR29B2CHG FLT3 PELI1 DOCK5 FYN LINC00662 GSK3B DENND1B SAMD4A CD226 GNG7 PGD NLN AHR UBAC2 CREB3L2 FAR2 MAML2 FNDC3B ARGLU1 NR3C1 FNBP1 CDK19 KANK1 DOCK2 XPO6 AUH TIAM1 STAT6 C15ORF48 AC104078.2 AC009226.1 LRRFIP1 AL139807.1 RNGTT LNPEP MCCC2 IQUB PIK3CB SGMS1 GDE1 CUL3 BCL3 AC022509.2 AL390957.1 DCBLD2 RAD51B CMC1 RALGAPA2 PDCD10 AP4B1 WDFY4 SLC29A3 MAFF MTRF1L METTL9 KATNB1 ZC3H6 TMEM41B\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AL138720.1 ARHGAP25 ARHGAP26 XYLT1 MBP ETV6 AC069368.1 RAPGEF1 VMP1 DOCK10 PIK3R5 ELF1 PACSIN2 STK24 RUNX1 TTC7A LYN ERCC1 CUEDC1 AC024909.1 RBPJ ASAP1 TRAF1 AHNAK CDH23 ALOX5AP ZYX FOXO3 UBAC2 AC017083.3 ARAP1 AHR CHST11 PVT1 UBXN11 AC024909.2 MOB3B MAML3 AC079313.2 CFLAR AKAP13 MGAT5 TG GPR68 MGAM HMGB1 ANKRD44 ZMYND8 PATL2 LPCAT1 ZBTB7B DNM2 UBASH3B PLEK NFE2L2 TSPOAP1 RAD9A POU2F2 ECE1 MOB3A EEPD1 PRKCB MAP3K5 AC090559.1 AC016831.7 RASSF3 PGS1 AC007923.4 MKNK1 FASTK CPQ GRK6 CD44 PLAUR STXBP5-AS1 SEPT9 KLF13 KLC1 PPP3CA ZNF365 TSPAN14 ATG7 CTNNBIP1 HIP1 PHF19 ANKRD11 MAML2 TNIP1 XXYLT1 GNA15 PRKCH AP3D1 MBOAT7 ITGB1 ZFHX3 GNAI2 ZMIZ1 FARS2 SLC6A6 DSE\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 AKAP13 UBAC2 FOXP1 LPP LINC01588 RAD51B ATXN1 IL7R AC016831.7 CYTIP RERE BCL11B ARMH4 TGFBR2 BCL2 AC068896.1 FOXN3 FAM107B IKZF1 PRKCH ELMSAN1 CCDC88C ARHGAP26 ARHGAP25 CHST11 PDE4B RIPOR2 MBNL1 CELF2 MYH9 FYN TSPOAP1 FNDC3B AL138720.1 DLGAP1 HDAC4 LIPA RAPGEF1 PPP2R5C AC010894.3 HIVEP3 RPTOR MAML3 GNG2 CDK6 LINC01004 ETV6 MAML2 RASSF5 SGMS1 NEAT1 TNFAIP8 RHOH TSPAN14 PRKCA PPP3CA RABGAP1L AMPD3 SEPT9 PATL2 CD58 LPXN PRKCE ABTB2 TLE4 JARID2 ARHGDIB PRKCQ RPS6KA2 LINC01934 TTC33 CD247 KLF13 AL450998.2 ARID5B MIR29B2CHG ATXN7L1 PIP4K2A STK10 ITPKB RFX3 SKI UBE2D3 PTPRE PTMA LDLRAD4 KLF6 CREB3L2 TBC1D14 MAPRE2 VMP1 PTPRC ELMO1 ACOXL MAP3K3 ANKRD44 AHNAK CSK LINC01126\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PPM1B RPTOR AL160272.2 SETBP1 LPP TMCC3 PIGN HIVEP3 CHST11 IQGAP2 LRIG1 ATXN1 UBE2O AUTS2 DDX60L P4HA2 TM2D2 ZWINT AC079313.2 CHD1 FAM156A TAB2 NVL TMC1 STK10 TOR1AIP2 SIAE BCAR3 NCAM1 MOB3B AL138720.1 TGFBR1 BCL2 ATP6V1E2 MICAL2 CTIF UBAC2 CD44 SEPT9 PRKCA AP002884.3 MAP3K5 AL049629.1 TLE4 CD55 STIP1 IFNGR1 RBPJ ATG5 TBC1D2 SDR42E2 SPART MPRIP SMAD2 PLA2G6 EBAG9 UST TCP11L1 LAMB3 PCCA MCCC2 TIAM1 ARHGAP26 CTNNBL1 MALINC1 INSIG1 C1GALT1 FAM219A MYO5C AP003469.2 TTC33 GNS SERGEF EEA1 AFF1 SHTN1 AC004943.2 HNRNPK JADE2 UHRF1BP1L B9D1 PLAU IL6R INIP AC016831.7 TAOK3 AK2 ELK1 CROCC RFTN1 ARF4 DNAJC1 CHURC1-FNTB CDC14A CAMKK1 IGF1 AC083843.2 HPS5 FBXL13 ITGAX\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 PDE4B AC079313.2 FOXN3 CELF2 RUNX1 SOD2 MBNL1 AHR RAD51B ATG5 AC016831.7 STAT1 TLE4 SUSD6 ETV6 ARHGAP31 LMTK2 AKAP13 CFLAR RB1 SERINC5 RDX SEMA4D LCP1 ARAP1 RIN3 SLC43A2 USP6NL CDC42SE2 PATL2 WNK1 CHST11 LINC01135 HDAC4 TNFAIP8 SMAD3 CORO1C RBM47 HIVEP3 ARID5B EXTL3 FOXK1 DLEU2 LINC01588 ACTB ZFP36L1 PTK2B DOCK4 STXBP5-AS1 CDK13 ST8SIA4 NXPE3 OSBPL3 PLEKHG3 ZNF395 CDK19 CDK6 FLVCR2 RASA3 UPP1 MOB3B RNF216 CYTIP ECE1 AC069368.1 FNDC3B TMSB4X TTC7A VIM-AS1 PAG1 SGTB OPRM1 IQSEC1 ELL ST6GAL1 RHBDD2 ADAMTSL4 MBP OGDH CASS4 ARID1B PPP1R18 ARMH4 GPR68 ZBTB7A STK10 ZNF365 HDAC9 WWOX PTGER2 AC009226.1 CTSZ LIPA SLC12A8 SNX9 MTAP FAM129B IL15 FRY\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AL162377.3 TGFBR2 SCML4 CD44 ELK3 PRKCQ RB1 MGAT5 TGIF1 FYCO1 PIK3IP1 GDI2 EZR PLXNA4 LDHA RXRA RYBP SGMS1 TAF10 SLC11A1 MALT1 CYP2R1 CRTC2 TRIM5 SYNE1 AC073612.1 PLCG1-AS1 TIAM2 AC090559.1 PLCB1 DAGLB LAP3 CPSF6 ZFYVE28 RHEB IRAK2 CASP8 NDUFAF3 IDH3G CCDC167 RAB13 DGKD CAND1 NAP1L4 STT3B LDHC AC078802.1 ORC1 USP6NL TRERF1 MYO1D AL360181.3 TMEM41B EEPD1 DYNLT1 GALT HMGB1 BHLHE40-AS1 AC008438.1 RAB26 BICRAL GATAD2B WDFY1 CASZ1 CYFIP2 RPRD1B STX7 LIMK2 XPO1 USP34 SPECC1L-ADORA2A RFTN1 TIPARP SYTL3 AC004943.2 FOXO1 RCOR3 DLK2 TNFAIP8L2 GRAMD2B MAPRE2 CASP9 AC243829.1 AC104971.3 USP37 ARRDC3-AS1 EDEM1 IQSEC1 TRIM66 AC004241.1 ZNF518A ZNF292 NR3C2 LMNB1-DT AC008667.1 NAIF1 PPM1G ARHGAP26 MSL1 ENC1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ATXN1 STK17B AKAP13 AC016831.7 TNFAIP8 TBL1XR1 PBX4 ANKRD44 TG MBNL1 CELF2 CD247 AC069368.1 AHNAK FYN ATG5 TTC33 CCDC88C MBOAT7 BCL11B IQCD CDC42SE2 DNAH2 RPS6KA2 FOXO3 TRAJ28 BCL2 KDM2A ERN1 MATN1 AL359736.1 FNDC3B TTC39C COQ8B ASTL CAMTA1 INAVA PCMTD1 IKZF1 CCND3 MGAT5 SSSCA1 EIF4B HECW2 PIK3R1 ATOX1 RORA-AS1 RALGDS CHST11 SACS PPP3CA GLS DLEU2 AL357060.1 AC007881.2 ETS1 MXI1 AC068896.1 LINC01004 HBP1 AL355916.3 MYH9 HDAC4 EVL AC022217.3 CASP8 TGFBR3 CASC11 ZCCHC2 PREX1 GSK3B KIF18A RIN3 VMP1 MAST4 ASAP1 HK1 PTPN6 CSGALNACT1 CYTH1 LINC01588 RAB37 LRRFIP1 ELL C17ORF67 KSR1 RAB11FIP1 AC009126.1 NPAT RPTOR ITK NCAPH2 PDE4B XPO1 MIR155HG LCP2 PTGES3 PLEKHG3 SKI ZFYVE28\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 SUSD6 LPP TBC1D14 ACTB ANKRD44 FOXN3 CDH23 AL355916.3 PATL2 IFNGR2 LINC01588 RASGEF1B RAD51B RHOBTB3 LYN UBAC2 HIVEP3 JARID2 DUSP22 LINC02384 HECW2 DLEU2 STX11 MAML2 AC016831.7 ARSG STAT1 LINC02539 ARMH4 AL390957.1 MORC3 AC079313.2 AL138720.1 GFOD1 WARS BEST1 FAM110A ETS2 ARHGAP26 LDLRAD4 MCOLN2 AC138123.1 CYTH1 MNT RPS6KA2 XPOT ARHGAP15 CHST15 PIWIL4 WBP1L MAP3K5 CMIP AL357060.1 CRYBG1 PKIB LIMD1 GAB2 GAS7 IMMP2L ADAM10 SIK3 CTSZ H3F3B MYOF PRCP USP4 SH3TC1 TTC7A VCPIP1 STK10 SZRD1 DMXL2 ASAP1 FARS2 ELMO1 TMEM143 ADK AC069368.1 PDE1C LINC01344 VRK2 TEX41 TBC1D5 ACVR2A CHST11 IL4I1 AP003086.2 ETV6 RAPGEF1 AFF3 ZNF516 EPB41L3 PNKP CAB39 ATG5 PFKFB3 LINC01136 HIST1H2BC SF1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 ARHGAP26 AC016831.7 RAPGEF1 ST3GAL1 CHST11 STK10 STAT1 LINC01588 HDAC4 ZMIZ1 ITPR1 GPR68 SH3BP5 ASAP1 AC079313.2 RALGDS PRKCH ARHGAP25 ATXN1 ATG5 LDLRAD4 RPS6KA2 RPS6KA5 JARID2 PTPRE MBP CDH23 PTMA PLXNC1 NCAPH2 AL138720.1 AKAP13 ABR SEPT9 WWOX RASSF5 NR4A2 IL16 FOXP1 ANKRD11 MGAT5 TRABD2A ANKRD44 CYTIP BCL11B MCF2L2 MED12L RGCC CBLB TSPAN14 ARAP1 FYN RB1 ZNF365 MXI1 INPP4A TG MAP3K3 CHD9 CCDC88C MEF2C CRADD LRRFIP1 PLEC INPP5A SLC6A6 RIN3 RAD51B AC068896.1 ELMO1 MBNL1 PTPRJ PREX1 NFE2L2 AL359736.1 IGF1R BCL11A SMAD3 RHOA CFLAR PATL2 FAM107B GRK6 PIP4K2A CARS2 SLC29A3 MYH9 DUSP10 KCNN3 MGLL PRKAG2 MAP3K12 SVIL PRR5L AC024909.1 UMAD1 RHOBTB3 MAD1L1 FOXN3\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AC016831.7 PLA2G6 CRIP1 LPP TBC1D5 PHACTR2 ANKRD33B ACTB LINC01588 AC068896.1 AC009226.1 MTPN CDK6 AC008105.3 FOXP1 NUB1 MCF2L2 FOXN3 RAD51B ASB2 DCAKD ETV6 ACVR1C AC007513.1 ATXN7L1 TNIP1 RAC1 TMEM192 RCSD1 IL7R AHR MB21D2 UBASH3A PHF19 ASAP1 NLRC5 SEMA4D STAM2 CCR7 TRAF1 STAG2 HIPK2 DNM2 HDAC9 TIAM1 RIN3 PMAIP1 KDM7A PDCL3 ZC3H12D PTK2B FNDC3B VAV2 TBXAS1 SLC1A2 CERS6 RUBCN GPR132 AC091114.1 IDE ESYT2 CRY2 TCP10L2 ARHGAP25 MSMO1 MGRN1 AP002990.1 UMODL1 ITGAE ABCB9 FGFR1OP TCF4 SAMSN1 HAVCR2 AL031056.1 TCF12 CRTC3-AS1 FASTK LINC02427 MAMLD1 STIM2 MREG ASB8 ELOVL6 PTPN23 SDR42E2 ATG5 ARAP2 LTN1 GPRC5C MTO1 ZNF426 XPNPEP1 SIK3 ALCAM AC009313.1 NCOR2 SLC19A2 RBSN P4HA2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AC024909.1 TTC7A CHST11 ITPR2 TXNRD1 PATL2 NCOR2 AHR RUNX1 MAML3 AC069368.1 MBP MAP3K14 ARHGAP26 HK2 ZNF365 NRL FOXN3 SEMA4D CKAP4 ABHD15-AS1 DUSP22 CUX1 PLXNC1 CASS4 DDN-AS1 LMNA FGD3 ABCG1 CDH23 MED12L LPP PTPRJ CUBN AP3D1 TLE4 SLC6A6 ANKH PLXDC2 LPCAT1 AC024909.2 RARA PRAG1 HDAC7 IQSEC1 AC007834.1 NKIRAS1 RWDD2B LYN DHTKD1 NXPE3 MAPKAP1 SUMF1 AL138752.2 RNASEH2B-AS1 AL158152.2 DIAPH1 KLF13 PALM2-AKAP2 WDFY1 CLCN7 RAD51B AL691403.1 SMAD3 KCNAB1 TFEB AKNA MIDN NDUFAF6 CLTA SPRED2 ARSG ANTXR2 IFNGR2 LDLRAD4 ZNF367 ORMDL1 AC138123.1 ZNF710 AKAP13 UBALD2 FAM214B LINC00893 LINC00499 ARHGAP24 ATXN1 SYK CUEDC1 GNB2 TYSND1 TRAPPC8 SEPT6 ATAD2 RREB1 RASSF3 CELF2 IL6R NCK2 SLC9A9 KAT2B\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FOXP1 AKAP13 TNIP1 TNFAIP8 STK10 CD74 RAD51B ANKRD44 ARHGEF3 CMIP RUNX1 PVT1 AC016831.7 MAP3K14 AKNA MIR29B2CHG DLEU2 ITPR1 HDAC4 ETV6 CSK PATL2 SP4 ZNF365 SNTB1 RNF166 ATOX1 PTPRJ CDC42SE2 PRKCH MBOAT7 PRKAG2 DOCK10 CD247 NLRC5 ITPRIP RFX3 ARSG LIPA PREX1 ARID5B BCL2L1 STAT1 RERE NFIC ZMIZ1 FYN SLC13A3 FAM117B LINC00649 FLI1 MGAT5 ST6GAL1 ANKRD11 GATAD2A HAVCR2 RNASE4 CD164 RAPGEF6 SEMA4D NFKB2 PDE4B RIPOR2 NCOA7 UBAC2 MCF2L2 INPP4B AHNAK MAML3 NCK2 LINC02205 ITPKB PSTPIP1 SERINC5 UTRN ITK AC097534.2 PCAT1 SMG7 AC068896.1 RMI2 FAM78A PTPRE ATXN7 CMTM7 ANXA6 CYSTM1 TGFBR2 AAK1 LINC01588 ELMO1 FOXN3 STIM1 LRRFIP1 AC008764.1 LITAF FKBP5 STK32C OGDH MARK2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: STK10 ARHGEF3 PRKCH STAT1 ZFP36L1 LINC01934 IKZF1 ST3GAL1 CDC42SE2 FOXP1 RAD51B TGFBR2 HDAC4 BCL2 AKAP13 ANKRD44 AKNA UBAC2 NFE2L2 AC068896.1 LINC01588 FAM107B AC010894.3 CHST11 CDC14A RUNX1 CELF2 TNFAIP8 UMAD1 LINC00598 GATAD2A IMMP2L SH2B1 LIPA TSPOAP1 PTK2B CASC11 POU2F2 MBP ETV6 NR3C1 LRRC23 CD247 BACH2 SSBP3 ARHGAP25 PLXNC1 PVT1 PRKCB SERTAD2 WBP11 AP000311.1 HIPK2 GRK5 PRKACB NCOR2 ZNF365 LEF1 HECW2 ST8SIA4 AL163932.1 PCNX1 DOCK10 SEPT9 ASAP1 BCL11B CCNY UTRN PTPRE AC009126.1 INPP4A AL390957.1 PDE4D RAP2A TMCO4 SRPK2 DEGS1 KIAA1551 OSBP GPR174 ARHGAP5 PRKCA AL357060.1 TMED7-TICAM2 MKL1 SLC45A4 XYLT1 AC025682.1 SLC2A1 INPP5A JAK1 PPP1R16B TENT4B ZBTB20 ANAPC5 SRP14-AS1 MAGEF1 AGA ZNF846 LRIG1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ETV6 MBP AC068896.1 ATXN1 AKAP13 ARHGAP26 FOXP1 AC010894.3 RUNX1 SEPT9 TSPAN14 IKZF1 ANKRD44 ATG5 FYN FAM49B TNFAIP8 UBAC2 ZNF365 RAPGEF1 CHST11 MAP3K5 HOOK2 AC016831.7 TSPOAP1 HDAC4 PRKAG2 RPS6KA2 AC069368.1 ST8SIA4 RBPJ ATP6V1D STK24 DOCK10 HECW2 STK17B ARHGAP25 LINC01588 KLF9 CASK FYCO1 ELMO1 STAT1 ITPR1 MAML2 AC079313.2 CDH23 ST3GAL1 LCP1 ASAP1 ITPK1 IQGAP2 MBNL1 HIVEP3 LPIN2 TLDC1 AHR HIVEP2 ARID1B AC022126.1 AC016907.2 NFATC2 DLGAP1 ETS1 ST3GAL5 AGO2 TNRC6B MAST4 IL16 RIPOR2 MACF1 ARID5B BACH2 PRKCH TGFBR2 ABLIM1 YWHAZ MPP7 LPP CIITA MIR3681HG PDE4B FOXN3 STIM1 SIN3A MAP3K3 CNDP2 EVL CYTH4 PLEKHH3 LPXN ARMH4 RAD51B ANKRD11 PIP4K2A LMNA TNIK ADAMTSL4 GATAD2A NCOA2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: DLGAP1 IL7R AC016831.7 FOXP1 ELMO1 AUTS2 RAD51B ASAP1 MBP AKAP13 ACTB BCL2 PLCL1 PRKCH MAML2 CELF2 KLF13 ANKRD44 FYN TSPOAP1 GPR55 OSBPL3 CDK6 SPRED2 AL355512.1 LPIN2 AC068896.1 COTL1 CD226 FAM129A PTK2B HIVEP2 RELL1 FNDC3B RPTOR SERTAD2 BIRC3 XYLT1 STAT1 CDC42SE2 CIITA SLCO3A1 MTSS1 AHR LIPA DNMT3A ATXN1 BACH2 AMZ1 MBNL1 ATP2B4 KLF6 STK10 CMIP ARL4C MGAT5 ALPK2 SEH1L MBTD1 VOPP1 PPP1R16B COA1 IL2RA PLXNC1 ATOX1 VMP1 PTPRC CAMTA1 CCR7 PRPF40A JADE1 BCL11A IKZF1 LDLRAD4 GRK5 AL357060.1 FYB1 DOCK8 TTC33 JARID2 MAD1L1 HECW2 CCNT2-AS1 ARHGAP26 NCOA7 BCL9L UMAD1 SAMSN1 TRABD2A MGLL TAF10 CPOX SH3KBP1 SLC38A1 PLEC SORL1 RUNX1 SND1 POLR1A SLCO5A1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FOXP1 ATXN1 IKZF1 AC016831.7 HIVEP3 RAD51B TG PVT1 ARID5B ETV6 DLGAP1 ARHGAP26 HOOK2 PCAT1 PDE4B TSPOAP1 UBAC2 AHR SEPT9 CELF2 ARHGEF3 LINC01588 VOPP1 BCL2 ANKRD33B BCAR3 CSGALNACT1 BACH2 LDLRAD4 RIPOR2 OSBPL3 CFLAR CBLB KLF13 ZBTB20 LYN AC012368.1 PAX5 ATG5 ZFPM1 PATL2 XYLT1 FOXN3 PTPRJ CCDC88C NCK2 NFATC2 HIVEP2 UMAD1 BHLHE40-AS1 EBF1 IQSEC1 ITPKB RUNX1 CDC42SE2 TFEB ITPR2 JARID2 DUSP10 MAML2 HDAC4 TNFAIP8 SMAD3 ACTR3 PKM TBC1D5 UST TGFBR2 TCF4 AKAP13 HDAC9 RAP1A FAM107B SAMSN1 DOCK10 XXYLT1 LINC01934 BLK ARHGAP24 TNRC6B EPS15L1 OGDH VMP1 ANKRD44 LPIN2 MIR3681HG P2RY8 CAMK2D NCOR2 RHOH RUNX3 RIN3 UBALD2 KAT6B RAPGEF1 ARID1B SEMA4D AL035530.2 EXOC2 PRKCH\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: SEMA4D FYN AC016831.7 CHST11 ARHGAP26 RUNX1 LCP1 RPS6KA2 DRAIC SEPT9 LINC01588 TRPS1 CCDC88C SETD2 LINC00861 SYNE1 ASAP1 ATP13A3 APBB1IP MAML2 RIPOR2 USP25 CIC PIP4K2A C1ORF112 G3BP2 HIVEP2 PRKCH CELF2 ARMH4 UBP1 ARID5B TIPIN MED12L KIF21A PITPNC1 AC069368.1 PRAG1 NCOA2 LINC00578 KIAA0513 KCNAB2 ANK3 SLC25A40 PLCD1 ATP6V1E2 MPP7 PIK3R5 AP000787.1 KLHL21 METTL8 HSPH1 RNF44 NCL CRTAM MARK4 CARD19 SEPT6 FKBP15 RGS9 FNBP1 ERN1 HDAC4 SF1 OXNAD1 AF241726.2 HACL1 RORA-AS1 AP000311.1 CST7 ZMIZ1 SLC11A1 TEX14 MYH9 SMAD3 GLIS3 INPP4B CBLB AKNA MYBL1 TGFBR2 PDE4D PLCG2 HMGB1 ZNF77 NOP58 IGFLR1 RAB37 JARID2 NRP1 ARSG AKAP13 PVT1 LINC01655 TMEM131L AL450998.2 KAT6A MINDY2 AFG3L2 EPC1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ASAP1 AKAP13 ERCC1 PACSIN2 LINC01588 FOXN3 ETV6 RAPGEF1 BCL9L ACTR1A PLA2G6 PRKAG2 AL359710.1 CD74 CPQ LPIN1 GALNT2 CYTIP AC093423.3 ATOX1 FNDC3B NHSL2 AC022217.3 RUNX1 TAF10 DNAH2 RBPJ EBAG9 NRP2 NEAT1 CDCA3 MAML2 FBXL19 ARMH4 ARRB1 NCOR2 ALDH1A2 PTPRE RALGDS MOB3A TPRA1 VILL RPN1 COTL1 DOCK10 ELMO1 MBP G3BP2 CSF1R GAS7 CRADD SERPINB2 PFKFB4 ARHGAP26 ABCA1 ABHD2 KDM2B CRTAP PFKFB3 SLCO3A1 AC079313.2 KLF9 DEAF1 AC008040.1 AC090559.1 MAGIX MAPKAPK3 CHD9 PKM SIK3 HIP1 RCOR1 ELMSAN1 PCDHGA1 YWHAZ PECAM1 CPEB3 ZBTB7A FMC1 NUMB ACSF3 GAB2 PTPRC UBE2D3 MAN2A1 AC005476.2 SIN3A AGO2 ZEB2 AC004069.1 LINC02357 BCL2 LIMS1 RASA3 NFE2L2 IL1R1 GNG2 EPC2 IKZF1 ZNF488\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RAPGEF1 AC068896.1 ATXN1 LDLRAD4 RAD51B ZMIZ1 PTPN6 LPP AHR RUNX1 DOCK10 LINC01344 AKAP13 MGAT1 TIAM1 CHST11 NECTIN2 CDK4 AC079313.2 STK10 KDM2B MBP UBAC2 COL4A2 RIPOR2 ARHGEF3 ZEB2 RAB8B NEAT1 MALAT1 PLXDC2 TGFBR2 MAP3K5 ELMO1 PIK3AP1 SLC8A1 LIPH CPQ ACTB TSPAN14 NEDD4L CREB3L2 RPS6KA1 RB1 PRKAR1B TMEM53 IL21R MAN1A1 MAML2 PRKCA LIPA AK9 SH3PXD2A LDLR UBE2J1 AL139383.1 DIAPH2 MAMSTR HIVEP1 AC069368.1 KIF11 SHPRH LCP1 ITGAE THADA ZRANB3 RPS6KA2 LYST KRI1 DNAJB5 IQSEC1 EXT1 HIST1H2AH PILRA SLCO2B1 IGF2R ADCY7 LINC01004 SF3A3 ST6GALNAC4 STIM1 IL16 CCDC6 ZNF609 JARID2 PACSIN2 TSC22D3 CELF2 PAF1 ERCC1 SNX29 PAQR9-AS1 MBNL1 HIST1H1E HIST1H3A UVRAG ALOX5AP CDC14A PDE2A TAOK3\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AL359736.1 IMMP2L AGBL3 FAM129B ZIM2 IL16 COL23A1 MED12L LCP2 MAML2 LDLRAD4 CSF1R SIN3A ZBTB20 BMT2 ZBTB45 ARHGAP6 RAPGEF1 TBC1D2B AC008771.1 WHAMM SLC9A1 ATXN1 RIN2 ENOX1 INPP5A MIR222HG DOCK4 SLCO3A1 GYS1 H3F3B RUNX1 RTN4 ABCA1 SMIM2-AS1 CDKN1B ARHGAP10 RDX NLRC5 ARSG ADAM12 AC138123.1 TAB3 CTSC ARHGAP25 MEF2C ZBTB7A KIFC3 SUB1 PCDH9 PAQR9-AS1 FAM20A FAM96A FAM227B SACS AC058822.1 IMP4 OXCT1 SHC4 A1BG-AS1 TIFAB SLC27A1 WAC-AS1 RAD51B AC068724.3 UBXN11 FLI1 LUCAT1 PSD3 UBE2D3 NEDD9 CCND3 TAOK3 GK UBAC2 TBL3 MSN PTAFR TSGA10IP PRKAG2 MT2A AKAP13 AC021752.1 LINC01431 HDAC4 ZNF804A AC007384.1 SGMS1 MAFF LITAF MYO5A PITPNC1 LACTB MKL1 ZNF800 TIGD6 MCF2L2 SMG7 ERP44 SLC27A5\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AC016831.7 ATXN1 UBAC2 HIVEP2 TNFAIP8 MBP VOPP1 AKAP13 RAPGEF1 HDAC4 MAP3K5 LINC01588 FYN STK24 ETS1 TRERF1 RIPOR2 ASB2 RUNX1 PTPRC STK10 CDK6 RBPJ AL390957.1 FOXP1 RFX2 CFLAR MDFIC CSGALNACT1 STAG2 ETV6 DAAM1 MAST4 AP000311.1 HECW2 AHR CGGBP1 PRKCH AC068896.1 FOXO3 NASP ARHGAP15 ANTXR2 HNRNPUL1 IRF2 DOCK10 NEMP1 TGFBR2 RAD51B FYB1 ATP2B4 ASAP1 GPRIN3 PTPRE NDUFAF6 ARID1B P2RY8 HIVEP3 CPOX ARID5B TBC1D5 GRK5 MBNL1 TSPOAP1 CELF2 IQGAP2 TFEB OSBPL3 MBOAT7 IQSEC1 ITGAE PHF19 ARHGEF3 RASGRP3 C1ORF112 CD82 ST3GAL1 FARS2 MIR3142HG TG GNAI2 CCDC88C PFKFB3 GLB1 SEMA4D ARRDC3 CARD19 NEAT1 DARS CD6 SMAD3 EEPD1 SIK3 NBAS FYCO1 MED12L VMP1 CUBN WNK1 LCP1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP25 LINC01588 EPC1 AC016831.7 RUNX1 ASAP1 CYTIP AKAP13 TBC1D14 MBP ANKRD44 HECW2 PLXNC1 TRABD2A CHST11 MAST4 SUSD6 CD226 HOOK2 RAD51B MBOAT7 CELF2 PPP2R5C IQGAP2 AMPD3 ITK HIVEP3 PHF19 PDE4B CD82 AHR PTPRC KAT2B CRADD CMIP NFKBIA RIPOR2 CDK6 TNFAIP8 ABI1 DUSP22 KLF13 C15ORF53 DOCK8 INPP5A MTPN ARMH4 ARID5B STIM1 DRG1 KIAA0232 CDCA3 ARID1B LIPA AC068896.1 AC096920.1 AL359736.1 ARNTL STK24 FYB1 ETV6 BHLHE40-AS1 PAG1 AL357060.1 AAK1 ETS1 MPRIP ATXN1 RORA-AS1 BTBD11 UBAC2 FOXP1 SEPT9 TNRC6B RRBP1 AC006449.6 P2RY8 GMFG SLC38A1 ATOX1 PATL2 HIVEP2 CSRNP1 ERCC1 ZMIZ1 PLCB1 HDAC4 CCNH RUNX2 TRAF1 SLC45A4 GPR68 SEMA4D MPP7 LINC00598 DUSP10 NLRC5 FOXN3 SGMS1 MIR3681HG\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 EBF1 CYTIP RAPGEF1 LHFPL2 PIK3R5 B4GALT1 AKAP13 AC090527.2 RB1 DLEU2 CHST11 RUNX1 AC069368.1 UTP3 NEAT1 CARD19 TGFBR2 CASS4 DOCK10 PPCDC ARRDC4 AC004922.1 ARHGEF2 AC010280.2 KLF9 ACTR3 FOXN3 SLC24A4 GSN CPQ TRERF1 MMP9 TNS3 MACF1 LMNA MTAP ANXA4 TFEB PFKFB4 P4HA2 TRG-AS1 EVL CFLAR STIM2 AP4B1 AP3D1 TLR1 PILRA SUSD6 AL121594.1 FAM120A IQGAP2 CD14 HAVCR2 AL138720.1 AL158071.1 PACSIN2 FRY HPS5 CD44 HM13 CCDC146 DLGAP1 SIK3 SLC6A6 MEF2C-AS1 PPP3CA NSMCE2 CEP128 CDKN1A UBASH3B SH3GLB1 ATP5F1E FDPS METTL9 ATG16L1 SERTAD2 NDUFA6 UPP1 ASAP1 TRAPPC3 LPP HBP1 CD59 CUL3 ELMO1 PREX1 HNRNPK UBQLN1 TRAM2 METTL8 NDC1 SH3BP5 ARHGEF40 MEGF11 CCND3 TGM2 LTBP4 RBPJ\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AP000311.1 PIK3R5 STIM1 ARHGAP26 FOXK1 PATL2 MGAT5 AP000295.1 CD44 MXD1 LPP GPR68 MARCH1 NOTCH1 RNF167 CUX1 KLF6 ZNF43 TMEM123 AC096920.1 RUNX1 NOP14-AS1 RBM47 ZNF365 ALOX12-AS1 IL31RA SFXN5 AC009313.1 U62317.5 IMPA2 NAIF1 ARID3B RCC2 HNRNPUL2-BSCL2 LINC01800 AC079313.2 CYTIP DTYMK MNT PLB1 ST3GAL6 NCOA7 FYB1 MGRN1 MCF2L2 SLCO2B1 THRAP3 TBC1D20 SEPT9 PELI1 INPP4A RBMS1 SP3 RAB26 AP3M2 C3ORF58 AC087645.2 TMEM14B ST3GAL1 PRPF40A PCNP AMPD3 KLHL6 NFE2L2 AC027644.4 ACTA2 XXYLT1 TGIF2-RAB5IF CRYL1 SUMF1 AC090527.2 DLEU2 KHSRP RPL10 AP002748.3 NHEJ1 MSN FMNL3 EXOC3 VMP1 CREBBP FBXO48 RAB6A RAPGEF1 CD22 MRVI1-AS1 DYNC1I2 FAM126B AC008957.1 GAS7 OLMALINC PSMD3 NANOS3 RFX7 TBC1D1 AAAS AC006449.6 ANKRD27 CASP8 NUTF2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MIDN VWF LPP RAB8B ZMIZ1 ETV6 MCF2L2 RRP12 RMI2 AL450998.2 TNFRSF1A CKB CHST11 KDM2B TG PIK3R5 STK10 RHBDF2 HIVEP3 ACADM STAT1 CIITA NRROS AC093423.3 AC007384.1 KLF6 BHLHE40-AS1 NR4A2 RB1 CCDC12 NEAT1 KLF7 DPYSL2 ALG5 TAPBPL RSPH14 VAMP1 KLF16 MTF2 FNDC3B CDKN2C LRRC8C AL049557.1 PARP2 VAV3 RAP1A SPATA24 GRK3 LINC01135 STK40 CROCC AC022113.1 SNX20 SLC15A3 ATG5 DENND4B GPR132 COTL1 PRKCH IL10RA TTC7A SCAMP4 SLC8A1 FAM102B FCER2 DOCK4 AC090559.1 NAPA PCDHGA1 DNAH1 AL356417.3 EDEM3 CRTC3-AS1 PSMB9 CYTH4 COQ8A ABCA1 CIPC LRMDA SORCS1 MACF1 ZBTB14 SDCCAG8 LINC01011 JAK2 SSH1 NOTCH1 TPT1 LINC01588 TRERF1 ASAP1 HINT1 MBNL1 FPR1 SLAMF8 MARCH2 CCDC107 RNF123 ABCB9 MIR29B2CHG\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: UBAC2 FOXP1 ANKRD44 AC068896.1 IKZF1 PRKCH ETS1 PIP4K2A RUNX1 HIVEP2 TNFAIP8 BACH2 RIPOR2 KLF13 AKAP13 MAML2 LINC00598 ARHGEF3 ARHGAP15 RAD51B BCL2 ITPR1 CELF2 TNRC6B PTPRC FYN CASP8 ST3GAL1 MBNL1 MBOAT7 DNMT3A PCED1B GATAD2A ARHGAP26 ATXN1 HDAC4 CDC14A TRAJ28 SEPT9 ITK SPTBN1 LINC01588 C15ORF53 MIR29B2CHG AC016831.7 ARID1B STK10 IMMP2L CHST11 PITPNC1 BICRAL AC009126.1 P2RY8 ATG5 ELMO1 IL7R XPO6 ANKRD11 RORA-AS1 TCF7 PATL2 CHFR BICDL1 CCND3 AC079313.2 TGFBR2 BCL9L FYB1 MAP3K3 NCK2 TBC1D5 RPTOR CYTIP AC010894.3 SORL1 PAG1 CMIP DOCK9 APBB1IP EVL ITPKB CDC42SE2 ANK3 SERTAD2 STK17B CARS2 MNT DNAH2 RAPGEF6 FOXN3 HLA-DMA ARRDC3 BCL6 AC024257.3 SH3KBP1 HECW2 ZC3HAV1 CBLB OSBPL3 SNX9\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FYN ATG5 PRKCH ITPR1 CCND3 PREX1 RFFL STK10 HNRNPUL2-BSCL2 MYBL1 TSPOAP1 SASH3 CELF2 HDAC4 AC008105.3 DYNLT1 NFATC2 ZNF395 ADAP1 AC068896.1 ZNRF2 ARHGAP26 GPR68 DOCK8 ANKH LTA SGMS1 AL359710.1 TECR HNRNPUL1 ANKRD44 RPS6KA5 SFR1 SPAG7 PPP2R5C RNF167 TXK TRAJ28 SYNE1 TMEM189-UBE2V1 FAM102B ZC3HAV1 ARID5B FLI1 RB1 SH3KBP1 ATP2B4 AL139246.3 FLNA PDE4B KLF13 SLC38A1 ARHGAP15 WDR78 CHD9 MSI2 PVT1 GRK6 STK17B IL10RA ATXN1 UBASH3A BRD7 CCDC26 LMO4 KHNYN DNM3 ZYX ZFP1 LTBP4 TOM1L2 AC069368.1 TOLLIP TMEM43 ZBTB2 PEAK1 LPP TMIGD3 PPP6R3 SSH2 MIA3 GATAD2A N4BP3 PAG1 DAZAP2 CEP83 LINC01353 MAP3K1 TNRC6B CD28 AC016831.7 EGR1 NCOA2 HECW2 RGS3 ST3GAL5 SERINC5 SLC12A6 AZI2 RASGEF1B\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 FOXP1 PIP4K2A AL359736.1 ASAP1 ARHGEF3 RUNX1 FYB1 AKAP13 BCL11B ARHGAP25 NEAT1 TGFBR1 RIPOR2 CHST11 BICDL1 LINC02384 LRBA FKBP5 FYN PLXNC1 GNG2 AC010894.3 IKZF1 PRKCB PRKCQ MCF2L2 ETS1 ATXN1 PVT1 VMP1 AC068896.1 KIF13B AC009226.1 DRAIC KDM2B ELMSAN1 ATG5 ACTR1A AHNAK RORA KLF13 ANTXR2 CFLAR ZEB2 AL138720.1 ZFP36L1 PDE4B ARID5B PRR5 IL21R GALNT2 GNAO1 NFE2L1 RERE CMIP EDEM3 CTIF PITPNC1 TRAJ28 UST ATXN7 EIF5A NFATC2 NFKB1 MAPK1 CDH23 CDC42SE2 GRK2 OSBPL3 MYO18A STK10 ELOVL5 LINC01588 SLC25A26 DNMT3A BICRAL LMNA BACH2 HMGB1 CYTIP PPP1R16B RAD51B USP12 PPM1B UBAC2 LINC01135 AHR XXYLT1 SART1 BCLAF1 WDR74 PAQR8 XYLT1 L3MBTL3 INPP4B NLRC5 SGMS1 CHD1 PTPN2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 ZMIZ1 ETV6 ETS1 AC008764.1 RAPGEF1 AL138720.1 ELMO1 HOOK2 PRKAG2 PSTPIP1 CELF2 CDH23 ASAP1 MBP ZMIZ1-AS1 MOB3A CD44 CHST11 SUSD6 PTPN6 ATXN1 CD82 ERN1 SSPN SPIDR AC022826.2 GRK6 LPIN2 PRKCH TG IQGAP2 CELF1 AC020916.1 MANBA LDLRAD4 AC022182.1 ARHGAP26 CMKLR1 VDR CPQ ZNF365 AC090559.1 SETBP1 AL357060.1 SLCO3A1 DUSP22 AC090527.2 ARHGAP22 LIPA AHNAK C16ORF45 RBPJ KANSL1 PACSIN2 LRRFIP1 AL035530.2 TIMP2 TSPOAP1 CSF1R PIK3R5 PPCDC FARS2 AKAP13 GAS7 DCTN4 ALDH1A2 ANXA11 GNG7 KLHL2 RASA3 NDUFAF6 KAT8 MAML3 RBM47 ARHGAP24 EMP1 PATL2 GPX4 MAP3K12 FBRS ABCF2 TRERF1 TLCD2 SH3TC1 SH3KBP1 PDIA4 UST KCTD9 ADK FOXK1 SGMS1 SEPT9 CDKN1B SEC14L1 ACTB CD55 PLXNB2 MYO18A GFOD1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH ATXN1 NFATC2 KLF13 ARHGEF3 CD247 TSPOAP1 ARHGAP25 FOXP1 RUNX1 ITGAE RIN3 ARID1B ABHD15-AS1 PPP3CA PREX1 IKZF1 PTK2B ARSG SEPT9 SPIDR MBP ARHGAP26 HDAC4 SIN3A FKBP5 DNMT3A VAV3 FAM49B RIPOR2 UBAC2 PLXNA4 CDC42SE2 LPP BCL6 PIP4K2A FOXO3 DNM3 CBLB GAS7 FYB1 RORA-AS1 AC104695.2 BICRAL SLC25A26 PTPN2 TCF7 AKAP13 TNRC6B BACH2 DUSP10 TLE4 CRTC3 KLRD1 ZDHHC14 GATAD2A TNFAIP8 RAD51B SEMA4D AKNA TRGV10 ZMIZ1 LINC01004 JAK1 ELMO1 RPS6KA5 ELL HOOK2 FNDC3B P2RY8 NBN TRAJ28 CCND3 CCDC88C PPP2R5C TBC1D5 GSK3B PDE4D IL2RB RAB11FIP4 LASP1 PTPRJ TTC33 BICDL1 LIPA ASAP1 LCP2 CELF2 AHR LEPROTL1 CEMIP2 BRF1 DOCK9 ATOX1 MBOAT7 MACF1 EPC1 MBNL1 PTMA FBXO31\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 RUNX1 PRR5L FOXP1 CD247 SEPT9 MBP ATG5 KLF9 KLF13 SIN3A CBLB ANKRD44 PTPRC LINC01588 PPP2R5A FYN PLCL2 RALGDS ZEB2 PLXNC1 IKZF1 FOXN3 MSI2 BCL2 ELL RUNX3 OSBPL3 AC093010.2 FLNA AKAP13 LINC00861 HIVEP3 PRKCH LINC01135 SKI BCL2L1 GSE1 RIN3 DNAH2 CELF2 LPP FKBP5 RASSF3 TSPAN14 PLCG2 TBC1D5 PREX1 CHST11 STAT4 MYBL1 STK17B KLRD1 AL035530.2 TTC33 SYTL2 TBC1D1 CCND3 PSTPIP1 AL390957.1 PEAK1 RHOF STIM2 ZFP36L1 GNLY LFNG HS1BP3 SSBP3 TIAM1 PLXNA4 ALDH1A2 ARHGAP15 MSN ARMH4 TMEM143 RWDD2B PTPRJ TNIP1 ITK MIS18BP1 SUSD6 NFATC2 AC008105.3 ZMAT3 AFAP1 EFNA5 AC022182.1 CCNY ABLIM1 NFKB1 DLGAP1 IKZF3 UMAD1 PPM1B BCLAF1 ADAMTSL4 MNT ZBTB2 EIF5A AL450998.2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ERCC1 CD247 ZFP36 MSI2 MACF1 ARHGAP26 HIVEP3 MBNL1 MBP ITGAE TSPOAP1 RABGAP1L TG FYN ARID5B SKI PATL2 PREX1 GRK5 PIP4K2A INSR NFIC RAPGEF1 KLRD1 ZFP36L1 CD96 TMEM131L LINC01126 BHLHE40-AS1 GSE1 CTIF HNRNPUL1 ABHD15-AS1 PSD4 IL21R CXCR4 ATXN7 TMEM192 PLXNA4 HNRNPL SEPT9 IGF1R KLF13 EGR1 IKZF1 IFFO2 TLCD2 RALGPS1 LINC01135 MAP3K3 PRKCH GFOD1 RUNX1 TBC1D1 CDK6 BCL2 CREBRF ZEB2 CAMK1D SPIDR LFNG AC020911.2 ZFYVE28 AC093827.5 EHD4 CRADD ANKRD11 HOOK2 ECE1 HIPK2 IL2RB LIPA ARHGEF2 FAM107B AL390957.1 EFNA5 HDAC4 RALGDS KANSL1 ANKRD44 NR6A1 SEC24C SP3 TMEM143 LINC01366 OSBP AC068896.1 GPT2 NEMP1 AGPAT1 ZNF846 RB1 SYNE2 AC015849.5 SLC38A1 STK17B EIF4B KLF6 CXXC5 TSPAN14\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 FOXP1 SEPT9 SORL1 BCR ARHGAP25 CHST11 B4GALT1 CELF2 MBP CFLAR AC009226.1 TSPOAP1 MAP3K3 DOCK3 IKZF1 NCOR2 DRG1 DNM3 RALGDS KLF13 AC020915.5 GNG2 CRYBG1 BCL11B ACAA2 C10ORF143 DLGAP1 PIP4K2A GRK2 DRAIC CD96 WWOX SDR42E2 RIN3 AC068896.1 SP1 ASAP1 PCED1B HAVCR2 ITPR1 PTK2B AAK1 C19ORF38 TAGLN2 LEPROTL1 PTPRE MGAT4A PLEK PPP2R5C SNRPD2 TNIP1 ARHGAP10 SPTBN1 NLRC5 IKZF3 PRKCH STK24 GALNT2 AP000311.1 GFOD1 AC069368.1 MGAT5 SYNJ1 PREX1 CPEB4 UBE2S PXN DOCK10 ZFP36 DNPEP BAZ1A ACOX3 SUCLG2 LINC00271 C3ORF58 CCDC88C EPC1 MR1 LINC00299 AKNA AL138720.1 RUNX1 AGO2 BLVRB VPS9D1 PRKCB NME1 HIST1H2BI MTSS1 POLDIP3 TNFSF8 ATG5 FAM49B INSIG1 GPR68 EML6 HNRNPUL2-BSCL2 STK10 AZI2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CDK6 ABLIM1 SEMA4D SMAD3 BHLHE40-AS1 MBP C1ORF53 IL32 PIWIL4 CHST11 GSK3B AKAP13 NHEJ1 LINC01588 CD247 CELF2 RNF44 AMPD3 POLR1A LPP ABCB9 EZR WDR1 MERTK TBC1D5 LRIG1 HIPK2 NOL4L PIK3CD PDE4B MBTPS1 KANSL1 RERE TRIM8 PTPRE AC009486.1 HS6ST1 SESN1 AL591885.1 TRABD2A AL590640.1 AC055713.1 ALDH1A2 PIP4K2A AC073934.1 ANKRD44 BRD7 XYLT1 ZSWIM6 RNF4 RIPOR2 MBLAC2 ETS1 DNPEP IFNAR1 GMPS UTRN JOSD1 E2F3 FAM107B ATG5 APBA2 INTS9 NUB1 AC068896.1 KIF2A UBE2R2-AS1 DNM2 ARHGAP15 AUTS2 CEMIP2 MSI2 CD38 AC145422.1 SMG6 GPR68 OXSR1 CNNM2 LPIN2 ECE1 FYN LNX2 OSBPL3 LINC02175 STAP2 PIGU TOX SHANK1 FAT4 CC2D1B POC5 VPS35L SECISBP2L STK25 HSPA5 RORA-AS1 DHRS3 RUNX1 MIB2 ERCC1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 FYN FOXP1 LINC01934 AL035530.2 CMIP RMI2 LINC01588 PTPRE TG FAM49B MGAT5 RIN3 MBNL1 SPIDR ELMO1 LIPA FOXO3 HIVEP3 VMP1 TSPOAP1 ATG5 AL390957.1 TNFAIP8 CSGALNACT1 UTRN SMG6 PRKCH PCGF5 ISG20 ADGRE3 AL162377.3 KRAS RUNX1 BCL11B PCED1B PATL2 RASSF5 AC008695.1 RORA-AS1 RAB27A TBXAS1 PTPRC HM13 PTCH1 CD99 PLCD1 DRAIC MBP TAF12 AKAP13 FBXO31 MIR3681HG TTC33 PITPNC1 PRKCE ITPR1 PIP4K2A MAPK1 CDV3 ACVR1B CD247 PRF1 PARP11 CFLAR CCDC102A CELF2 TGFBR2 ASB2 SLC11A1 RBM23 CYTIP ATXN1L SSSCA1 TRABD2A CARS2 NCOA2 AC093010.2 XKR6 IQGAP2 RTN4 CDKN1B ATP2B1 KIAA0513 RYBP ARHGEF3 ZNF217 ZBTB16 APLP2 CHST11 ITGAE TMEM189-UBE2V1 LFNG LINC01126 LINC01004 GALC RAPGEF1 RHOA WDR1 SERTAD2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP25 RAPGEF1 ITPKB IKZF1 FOXN3 AAK1 RPS6KA2 STK10 TSPAN18 RASA3 HECW2 ARHGAP26 CIC RIN3 PREX1 SERTAD2 IQSEC1 ASB2 SH2B3 CD247 RUNX1 CELF2 CSGALNACT1 ZEB2 AC008667.1 TRANK1 VGLL4 FNDC3B TSPOAP1 DLGAP1 FOXP1 CMIP GATAD2A CBLB VAV3 STK17B OSBP CHD4 USP36 SRBD1 MEX3C PTK2B RAD52 CDKN1B ACOXL IQCD OGDH TSPAN2 LIPA NFIA CCDC9 CNDP2 RGCC GSK3B AC068896.1 CHD7 CHST11 HIVEP3 ITPK1 AC016831.7 STN1 GFOD1 MAPKAPK2 ZNF609 VPS16 AZI2 AL136295.1 UMAD1 TRAPPC3 TMEM143 AC008764.1 ING5 ELL ARHGAP31 LINC01934 NBN CDR2L BCLAF1 LCP2 TNRC6C CCDC12 NUB1 HOOK2 TNFAIP8 PIK3R1 LINC01358 ITGAE ZSWIM6 INSIG1 MARK4 FBRS MRGBP PLXNC1 AC022217.3 ANKRD44 EHD4 PWWP2A STRIP2 AC093010.2 LPIN2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 CD247 PRKCH CELF2 ZBTB16 AC010894.3 RUNX1 ATXN7L1 FYN KLF13 RAD51B LIPA FAM102B CFLAR AOAH AL359736.1 ELMO1 AC093010.2 ZFP36L1 PLCG2 MBP ST8SIA1 SEMA4D HIPK2 BACH2 TTC33 DNMT3A PIP4K2A FYB1 EFNA5 MAML3 JAZF1 FOXP1 MAP3K14 ALDH1A2 LINC01004 P2RY8 MNT PITPNM2 HDAC4 ARHGEF3 AUTS2 STAT3 PREX1 BCL2 PITPNC1 ANKRD44 PRKCQ EPHA4 NF1 SPIDR STIM2 DUSP10 RIN3 RAD23B DDX60L CD96 HIVEP2 IQSEC1 ZNF831 GATAD2A MGAT4A GAS7 FAM129A PATL2 ABHD15-AS1 PLXNA4 GM2A ZNF217 GSE1 STIM1 INO80B ARSG SETBP1 PPP2R5C GGA2 MAN2A1 LRCH1 CDKN1B ETS1 PLAC8 SLC9A9 AL138720.1 DCAKD ARID5B AAK1 STAG2 SRGN CDC42SE2 APBA2 RAB27A ARID1B NR5A2 KANSL1 TLE4 MAML2 AL132671.2 STK10 ANKRD11 GEMIN7\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: IQGAP2 ANKRD44 SEMA4D FYN PRKCH AL035530.2 ARSG TNFAIP8 ARHGAP26 TRPS1 GPR68 P2RY8 TNK2 ITPKB PPP3CA SEPT9 RUNX1 CAMK2D IQSEC1 RERE RAB37 CASP8 KLF13 PTK2B MIR3681HG H3F3B APBA2 PATL2 SERTAD2 PIP4K2A PIK3R5 APBB1IP AKAP13 ST3GAL1 TRERF1 ATP8A1 ANKRD23 MED15 NR4A2 ATP2B4 LEPROTL1 ZFP36 ACTB HDAC4 LFNG ABHD15-AS1 DOCK8 ITK RARA MSN IL2RB ABHD2 SETBP1 PRPF40A SPTBN1 TGFB1 DNAH2 DNM3 SUPT3H GRAP2 MSI2 SLC2A1 PREX1 CRBN STK10 ECE1 DNMT3A AC010894.3 PRKCQ FOXN3 GATAD2A CMIP CDC42SE2 MTSS1 ZNF365 AL390957.1 GSE1 CUBN RNF167 IKZF1 UTRN BICRAL AC093010.2 DESI2 AC068896.1 RRM2B PLCL2 FOXP1 LRRFIP1 PPP2R5C MCF2L2 NCOR2 VAV3 TMEM135 TBC1D14 ANKRD11 JADE2 AC016831.7 RIN3 TMEM18\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AKAP13 RUNX1 ZFP36L1 CD247 APBA2 VGLL4 PRKCH RARA SEPT9 PITPNC1 LINC01135 PXYLP1 HNRNPUL1 CXXC5 RASSF5 DNM2 SESN1 AUTS2 AC079313.2 PRKCQ PDE4D CYTH1 AC011498.1 ARRDC3 ADAMTSL4 RABGAP1L CNNM2 MTSS1 ATXN1 BHLHE40-AS1 GATAD2A GNAS RB1 MEX3C BACH2 IKZF1 U2AF2 FIZ1 ANKRD11 FSIP1 LPXN AC093512.2 MROH6 CKS2 RIPOR2 FYN HIST1H1B ATP2B1 SYTL3 PSMA1 AC022217.3 CTNNBIP1 MAST4 LINC01358 TRGV9 ZDHHC14 JARID2 INPP4A LRCH1 SMAD3 PIP4K2A NOL4L SYNE2 SYTL2 HIST1H2BC CSGALNACT1 PRRC2B COPS2 SLC17A5 DLEU2 DUS2 KLF6 INTS6 HMGB1 IKZF3 UBP1 WAC-AS1 LINC01934 FBXL19 SUSD6 STK39 KLF13 LASP1 ACOX3 SCML4 LFNG EIF4G3 MAP3K14 MTMR4 BCL2 FKBP2 AF241726.2 LMCD1-AS1 BAP1 EPC1 DYM LAP3 ZBTB2 TBC1D2B FAM49B\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 CELF2 AKAP13 ZSWIM6 CIC MBP GRK5 PIP4K2A CBLB GNG2 CD247 MTSS1 MKLN1 KLF9 AC020911.2 DENND2D IKZF1 CCDC32 USB1 STAT4 PITPNC1 HLCS ITPKB RUNX3 DENND1B CD300A PREX1 AHNAK AC068896.1 IGSF9 NRL SEMA4D TRAJ28 PNKP CD226 WDR89 SKIL UBE2D3 ADGRG5 LINC01588 AC010894.3 ZMIZ1-AS1 TRIM33 SEPT9 PLCG2 RHEB SIK3 EFNA5 MSI2 SLC39A10 SLCO3A1 UEVLD SDR42E2 ZNF566 FBXO41 GPR68 TLE4 MIR29B2CHG ANKRD33B USP3 RIN3 VAV3 NDUFV2 KAT6B ZNF681 PKNOX1 HIVEP3 LPAR2 PTPRC SLC2A1 LRIG1 GRK6 CDC42SE2 AL928654.3 AL136018.1 FYN BCL6 RAP1GAP2 AC006369.1 KIAA0319L DRAIC SSSCA1 NOP14-AS1 DCTD ARHGEF3 CXORF40B ZNF43 PAN3 AL606489.1 EPS15L1 ELOVL6 AC019163.1 PTPN12 SPOCK2 RBPJ ARL10 ARID5B TG USP34 TSPAN14\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CD247 ANKRD11 HDAC4 PRKCH ZBTB16 FOXN3 DOCK10 MBP NFATC2 ARHGAP26 LINC01841 CHST11 FOXP1 HIVEP3 AC010894.3 HNRNPUL1 P2RY8 ITPKB ARAP1 TSPOAP1 TNFRSF1A RALGDS SLC2A1 PLXNA4 FSIP1 XYLT1 IL2RB CBLB ARHGEF3 STK10 EHD1 PRKAG2 ERCC1 ZBTB25 SORL1 NEMP1 KLF9 TCF7 PIP4K2A RUNX1 ELMO1 HNRNPL LINC01126 AC007163.1 ADGRE5 YARS GNG2 KLRD1 SPTBN5 DNM3 EPS15L1 DUS2 CELF2 TMEM163 RAPGEF1 PATL2 GRK5 TSPAN14 AOAH GPR68 MAML2 RGS3 RIN3 CDK6 AL450998.2 LRCH1 TMEM59 SEMA4D TBXAS1 SUMF1 FAM69A FAM117A LIPA AC243960.1 KIF22 MRPL4 BCL9L MAP3K3 CDC37 FYN PLEKHF1 PHLPP1 TMED10 ACTN4 TRERF1 VAV3 XRCC1 ITPR1 CDKN1B LTBP4 UBE2D3 GNAL ZNF250 DNM2 PFKFB3 RBM6 TENT5A PISD RAB4B-EGLN2 PREX1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AL138720.1 STK10 P2RY8 KAT6B AOAH AC009126.1 NEAT1 TMEM131L SMAD2 HIVEP3 RUNX1 RAD51B AC010894.3 FOXP1 KLRD1 HIVEP2 ZFP36L1 ITPKB PURB APBB1IP IKZF1 INPP5D CDKN1B EGR2 POLR1A MGA UST SYNE1 SMG6 TG SEMA4D TGFBR2 USP45 CARS2 ZDHHC14 ADAP1 GATA3 AC016831.7 LINC00299 PRKCQ DLG5 PPP3CA TRERF1 PALM2-AKAP2 HTT SH2D2A MSI2 STAT4 CDYL RAI1 ZFC3H1 CTIF RERE CD300A AL138752.2 MCM6 PTGER2 BICRAL GNG2 FYB1 HS1BP3 TAF15 LINC02328 TSNAX-DISC1 AC093010.2 PCDH9 JARID2 DOCK10 ELF2 WDFY2 ARHGAP26 PTPN22 RNF126 TEX264 MBNL1 LCP2 NCALD DENND2D NEMP1 ZBTB44 RASGEF1A TES FAM107B TSPOAP1 HDAC4 RCL1 RAD52 LINC01588 LINC02384 CACUL1 MYCBP2 PLA2G6 TTC33 MEF2D LPP UBAC2 LINC00271 IQSEC1 AC103736.1 HYLS1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX3 AC022075.1 RUNX1 GNG2 ST3GAL1 FOXP1 FAM107B TRABD2A ZBTB16 RNF4 SEC14L1 FOXN3 NKIRAS1 NR6A1 GSTM5 TIPRL ITPKB MIB2 SORL1 FYN CFLAR NUP210 DNM3 KLRD1 CHST11 SEC22C CORO1A CYTH1 LNPEP B4GALT5 GIMAP1 NQO2 AC035140.1 SPRY4 LRRC23 KLF13 PITPNC1 NANOS3 C9ORF3 AKAP13 HMGB1 TMEM131L PER2 ITPR1 AC018816.1 SEPT9 ERBB3 WAC-AS1 ACTN4 AAAS TGIF1 SEMA4C CBX8 AC027309.1 CCND3 TLDC1 NUMA1 TNIP1 C21ORF91-OT1 CYHR1 LINC02384 STAM LYRM4 ARHGAP26 AP005329.2 GINS4 RPS6KA5 EMC1 CHI3L2 BCL6 TMEM143 ZNF831 TTYH3 PLCG2 RALGDS KCTD9 MOSPD3 IRF8 NUBP1 ATG10 KANSL1 NT5C3A FAM210B TOGARAM2 MEF2D DNAH2 NSUN6 CXXC4 LINC01135 DOCK3 MARK3 RNF146 AC093010.2 EGR1 PDCD10 LYSMD4 TMEM181 CEP290 ETV7 PYGM\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: UBAC2 IKZF1 NFATC2 CC2D1B LINC00598 RPS6KA2 KCTD7 CCSER2 PLXND1 SEL1L PDCL3 PTPN4 SYNE1 AL161912.1 FLVCR2 MRPS27 CBLB MAGED1 AC117394.2 INTS6L SP3 SCML4 AMZ2 MSH2 PIK3R3 CHST11 SCUBE1 ANO10 UBA3 FAM72B ZFP36L1 AC078883.1 SLC16A7 LINC02356 SIK3 TOGARAM2 ARL8B SUSD6 RLIM NEK3 UMAD1 TPRA1 SH2D3A NDP-AS1 ZNF708 ERP44 STK4 KCTD9 AL158071.1 SF3B6 LMBR1L COL23A1 MOB1B BACH2 ST8SIA4 EPHA4 NECAB3 RNF44 IDS MTURN COTL1 SORL1 SSUH2 ABHD15-AS1 FAM117B RBMX FBXL12 DHRS3 STEAP3 HYAL3 ABI1 CA5B ARID1B PNP BCL6 AP003068.1 FOXP1 IER5 SWT1 ABHD10 MXD1 RWDD2B TPRN LRP10 SESN1 TRPV2 NMT2 CD226 ZNF800 PRKCH SDHAF4 YTHDF3 LUZP1 SEMA4D AL392023.2 AJ009632.2 STAG1 ECHDC1 NEK1 TIAL1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH RUNX1 AC016831.7 IKZF1 FYN CD247 FOXP1 ZFP36L1 FADS2 RUNX3 CCDC88C AL162377.3 LINC01588 PTEN MLLT3 CSGALNACT1 FYCO1 TBC1D1 LINC00426 SNX9 BCL2 JARID2 AUTS2 CMTM7 UBAC2 MAP2K2 LEF1 PCED1B HSPH1 NR4A2 MAPRE2 EEPD1 HNRNPUL1 ITPR1 AMER1 TCF7 TLE4 MDM4 PRPF40A ZNF831 FAM107B MAST4 SLC30A5 HDAC7 AC010894.3 FLI1 SLC25A26 SYTL3 AKAP9 DNMT3A SOD2 CYTIP TNRC6B IQCB1 CYTH1 TOX2 DDX54 MR1 GSTA4 IMMP2L H2AFV CHD1 NUP210 ARHGAP26 ADAMTSL4 CROCC GPD1 DLEU2 WDR82 VAV3 STAT4 ETV6 DDX60L PCF11 ATOX1 CLEC16A FARS2 BICRAL TOM1L2 B4GALT1 SCLT1 FAM117A BACH2 MCM9 ETS1 SETBP1 CAST PRAG1 CEMIP2 FGD3 PRF1 SCML4 ARHGAP25 FAM172A LEPROTL1 MPP7 CD226 GPBP1 GNAQ AL031599.1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 PRKCH GNG2 ABHD15-AS1 MBP AKAP13 RORA-AS1 TG RAD51B ARHGEF3 FAM117A CHST11 CDC42SE2 CDKN1B FOXN3 ENC1 HIVEP3 GRK5 EIF3H AC016831.7 ARHGAP26 ERCC1 IKZF3 SUMF1 FYN ARID1B LINC01126 FSIP1 RIN3 LPP PLXNA4 PPP2R5C NDUFV2 APBA2 ERBIN PLXNC1 PITPNM2 SEMA4D GAS7 RAB11FIP4 ITPKB CD226 FOXP1 AP000311.1 KLRD1 APBB1IP AL390957.1 KLF6 XYLT1 PJA2 ASAP1 C1ORF174 TNIK CELF2 DACT3 UBAC2 PALM2-AKAP2 ZBTB16 DOCK10 SMAD3 SLC25A26 ST3GAL5 JARID2 RASSF5 ATXN1 NEDD9 CD247 KLF13 PTPRE FNDC3B PHLDB2 IQGAP2 BCR TNFAIP8 IGF1R ANKRD44 ARHGAP25 TCF7 ACTN4 SYNE1 DLEU2 RHOF RASSF3 IQSEC1 PREX1 MATN1 LIPA IFFO2 EMC9 NFATC2 PTPRJ ENSA MBNL2 TRIM8 GGA1 ZNF395 HIRA ARHGEF1 CDC42 CROCC\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH RAPGEF1 ITPKB ARHGAP26 PLXNA4 MBP RIN3 RUNX1 SEPT9 TNFAIP8 CELF2 JAK1 NDUFV2 BHLHE40-AS1 GPR68 ITPR1 AC068896.1 THUMPD3-AS1 ATXN1 CROCC AKNA KIF2A CHST11 PITPNC1 RASA3 CD247 ARSG KLF13 LINC01588 APBA2 TMEM131L PRR5L GFOD1 RAD51B CDC42SE2 LINC00861 TNIP1 CTIF SESN1 PIP4K2A CCDC88C LINC01126 DLG5 MBNL1 GSK3B GAS7 MTSS1 ARHGEF3 STAG2 TSPOAP1 ZEB2 SP4 ASMTL PTPRC KLF9 STX10 BCL2L1 ESYT2 SUSD6 PDE4D CCDC12 CTSC INPP5A LIPA CDH23 FOXN3 PATL2 HIVEP3 STK10 KAT6B PRDM10 ANKRD44 CCSER2 FYN LINC00299 RBMS1 UMAD1 XYLT1 GSE1 AC009126.1 AKAP13 TLE4 CCNJL FSIP1 EHD1 JARID2 AL139246.5 SH2B3 FAM49B FGD3 UTRN TSC22D1 RHOBTB3 ELOC MAP3K3 MAPK1 C1ORF21 FAM107B DNM2 LRCH1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARAP1 ZBTB16 ZNF365 ZBTB25 PER1 AUTS2 CD247 MBP RIN3 AC069368.1 PLCXD2 GATAD2A ASCL2 SIN3A POU2F1 HNRNPL SDE2 DUS2 PLXNA4 MYO1F TGFBR2 ANO10 HDAC4 LINC01934 PCED1B AC005775.1 AF241726.2 SORL1 IQSEC1 CAMK2D RAP1A FADS2 IFT140 EIPR1 TMEM116 TLE1 CHD8 VRK2 CCDC9 GNGT2 RUBCN DIP2A DOCK5 FAM214B IQGAP2 FRYL ETS1 ST3GAL2 AOAH TNIK ARRB1 RARA ARHGAP25 HCFC1 VPS37C AC008667.1 TCP1 LNX2 STAT4 GMPR PEF1 NUMA1 ADGRG1 RUNX1 SLC15A4 AC020911.2 C1ORF174 RALGDS AL357078.1 DNAJC21 TSPOAP1 CLIC3 LPCAT1 ZFYVE28 HECTD1 ZSWIM6 RNF44 FAM117A SESN2 AC009126.1 CST7 ST3GAL1 MGAT5 GYS1 LRFN2 AC068896.1 GPR68 MGAT4A FBXO43 BCL2 CDC42SE2 AL691403.1 AL359736.1 CDC25B CDCA3 BORCS5 RPS9 BHLHE40-AS1 RAB27A AC025682.1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 SEPT9 MBP IL2RB LTBP3 ZEB2 CMIP IKZF3 RALGDS BCL2 XYLT1 SEMA4D RNF167 SH3KBP1 CHST11 HNRNPL RIN3 AC008764.1 SKI CIC ARHGAP26 NFATC2 PLCG2 DLG5 BACH2 NEAT1 HDAC4 ITPR1 CAMK2D PREX1 HOOK2 AC016831.7 FAM102B RUNX3 HNRNPUL1 FAM107B STAT4 SLC45A4 TSPOAP1 CCDC9 AKAP13 TRERF1 FYN CCND3 RGS3 SLC2A1 GATAD2A CDHR3 LINC01968 HIVEP3 RASA3 CSK PRR5L CAMK1D CCDC12 APBA2 FHIT BCAR3 VIM-AS1 ANKRD44 ITGA6 PITPNM2 AC008014.1 ITK ITGA4 PTPRC GRK2 PRKCH ELL RAD51B NF1 PCGF5 MIR3681HG LRRFIP1 TLE4 LIPA ARHGAP18 OTULIN ZFP36 EPHA4 CELF2 CROCC DAD1 IQSEC1 CXXC5 MARK4 MSH2 AC079313.2 CBLB C15ORF53 ZNF592 DNAJB12 AC116366.3 AL139807.1 C7ORF50 CD247 SMG6 KAT2B CFAP97 RMI2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 ARHGAP26 CHST11 ANKRD11 ANKRD44 FOXP1 NEAT1 PITPNC1 FOXN3 RAD51B CDC42SE2 PRKCH RAPGEF1 AKAP13 CD247 AKT3 AC068896.1 ZBTB20 IQGAP2 AC009226.1 CELF2 HIPK2 LINC01588 FYN HIVEP3 JARID2 BCL2 ATG5 MBP RIN3 RFX3 LPP MBNL1 KLF13 DLGAP1 BCL2L1 FNDC3B ITPR1 FYB1 CD226 MIR3681HG BHLHE40-AS1 RHOF AC008667.1 CBLB CYTIP NCALD B4GALT1 HDAC4 ICAM2 AC243829.4 NFE2L2 BCL6 CTIF IQSEC1 KLRD1 ST8SIA4 PTPRJ GNG2 AKNA PRKCQ SEMA4D TNIK TTC33 GNG7 RUNX3 SPIDR NEMP1 KAT6B INPP4A RRP12 SORCS2 AC008105.3 MAP2K3 CD58 TRGV10 KAT2B TBXAS1 DNM3 MIDN ZNF365 PKM AL160408.2 ELMO1 APBA3 SUMF1 PRR5L HIVEP2 PIP4K2A AAK1 SLC15A4 AL359736.1 CSGALNACT1 KLF7 TBC1D14 AL035530.2 TRAF1 PATL2 CAMK2D CDC37\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH ACTN4 SEPT9 IQSEC1 KLF13 FYN PREX1 BCL2 KANSL1 ETS1 MTSS1 ANKRD44 APBA2 CELF2 UBE2D3 ARHGAP26 STK10 MIDN AC016831.7 AL390957.1 TSPAN14 IQGAP2 CD247 CHST11 ARHGEF3 RIPOR2 HIVEP3 GAS7 PITPNM2 MCTP2 PTK2B BICRAL FOXP1 RAD51B MNT AKAP13 GNAI2 LFNG ENC1 MBP FBXL12 TSPOAP1 KLF6 CNNM2 TBC1D5 EPC1 MAP4K4 PTPRC IL2RB AC068896.1 FNDC3B ITPR1 AKNA PAQR8 PIK3R1 CAST FAM49B IKZF1 FSIP1 ERCC1 WWOX HNRNPL RALGDS PNKP DRAIC CD300A FAM117A BHLHE40-AS1 MAP3K3 SMAD3 ZCWPW1 RAI1 RIN3 PPRC1 LINC01588 ZNF837 SLC2A1 EVL CARS2 CCND3 LINC01934 HNRNPUL1 TNRC6B UMAD1 EFNA5 RAP2A SSSCA1 AUTS2 SYNJ2 GNG2 LINC00598 PLXNC1 PIK3R5 CST7 IGF1R CIC PAM NBN CXXC5 C1ORF35\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CD247 ARHGAP26 CELF2 FOXP1 IKZF1 HIVEP3 PNKP PREX1 PRKCH KLF13 ANKRD44 FYN CIC PIP4K2A CDKN1B NEAT1 RAD51B GPR68 LINC00861 DNM2 ITPKB AC010894.3 ELMSAN1 MTSS1 STK10 CROCC SCML4 JAK1 NFATC2 CMIP ITGAE SEMA4D TET3 TRA2B TOX2 GNLY ARID1B ANKMY1 TRAF3IP3 MIR3142HG RAPGEF1 ERCC1 IQSEC1 RASA3 DGKD TTC33 NR4A2 ZBTB16 FLNA NCALD ETFB MBP ZNF672 BICRAL SIN3A LINC02384 CHST11 SLC15A4 IFNG-AS1 FNDC3B DRAIC PPP2R2B UTRN AL390957.1 ZFP36 CDC42SE2 PXN DNPEP SMAD3 DGLUCY MSN STAT4 PTK2B EVL CD53 AL133523.1 RPTOR AC012560.1 ANKRD11 COQ8A RUNX1 TBCCD1 AC117394.2 FNBP1 RIN3 VAV3 MTMR12 CXORF40B PATL2 ARL4C DUS2 ATP2B4 MAD1L1 GNAI2 ABHD15-AS1 PRDM2 AUTS2 MKLN1 AL590640.1 PRKCQ\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: SGMS1 MAGT1 MRPL33 CCNYL1 CYTIP C1GALT1 PIK3AP1 AOAH FAM129A AC009486.1 CREB3L2 SLC25A26 AL512380.2 PITRM1 COP1 ADI1 NFXL1 ZC3H4 CELF2 WDR78 CHEK2 PIP4K2A SPIDR LINC02356 TG GRAP2 EDEM3 PRR14L USF3 AL359736.1 LPP ATXN2 ZNF33B OTUD6B-AS1 PATL2 GLG1 MACF1 LINC01353 ITGB1 NUDT5 PRKCH ERN1 TUBA1C AC068896.1 VIT NLK ADCY7 PRR5L RBM4B NDUFV2 TNRC6B CAMK1D ADAM12 SCML4 ZNF33A KIF21B LUCAT1 PEMT AL023755.1 OASL NRBF2 ACP6 RHOH DOCK10 HNRNPL AC008764.1 TOP2B CCNG2 ZBTB16 PDK3 GALC TMED7-TICAM2 ATP6AP1 AL162231.2 NCR3LG1 ATG4C PNKD ANKRD11 IFT27 SERPINE2 GADD45A KLF12 PELI1 TBXA2R AC010636.2 NFX1 AC008758.5 ZNF107 PSPH DCAKD PARP11 MIR3681HG PRKCQ LMF2 CCDC69 HAX1 MAP3K19 PRMT6 CHD7 TTC33\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CELF2 ARHGAP26 PIP4K2A AUTS2 ARSG TSPOAP1 NFATC2 LINC01934 FSIP1 IKZF1 TBC1D5 LINC00598 GAS7 BCL2 CCND3 RUNX1 ATXN7L1 PATL2 ANKMY1 GRK2 PREX1 LINC01126 AL359736.1 FYN IRF2 IQGAP2 HDAC4 RUNX3 ZDHHC14 BBC3 TGFBR2 ITPKB RORA-AS1 XRCC1 ACOXL ATP2B4 EPC2 ST3GAL1 PLEK DNAJB12 TRERF1 ICA1 AP003031.2 PPP6R1 RAB37 CD247 ARF4 STIM2 CRADD MARK2 PITPNC1 P2RY8 AC009486.1 CDC42SE2 KLRD1 ATG5 FAM13A SMAD7 WDR82 RIN3 ITGB2 BCL2L1 PPP2R5A ANKRD44 FAM49B GNLY DERL2 SFMBT2 CHST11 ZBTB16 CD300A OPA3 NCALD AC016831.7 GALNT2 FYB1 HMGB1 SEPT9 PPP3CA EPS15L1 PTPRC AKT1 POLM ITGAE ZNF558 CCDC9 CARHSP1 PCAT1 FNDC3A FOSL2 TSC22D1 EPHA4 BORCS5 TMEM192 HNRNPA2B1 PTPRJ ILVBL ARID1B SLC38A1 MAN1A1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: LPP MAML3 PITPNC1 TNRC6B ARHGEF3 GALNT2 BACH2 AC010894.3 FYN DRAIC PREX1 GATAD2A CD247 ITGB2 PIP4K2A NCK2 AC068896.1 CHST11 RUNX1 FOXN3 XYLT1 CCND3 RAD51B STIM2 RIN3 GFOD1 TSPOAP1 CELF2 MBNL1 CBLB PDE4D ELMO1 KLF13 P2RY8 LYST FRMD4B AC008105.3 CXXC5 PRKCH CORO1A FOXP1 SPIDR IQSEC1 ASAP1 MBP CMIP STIM1 HDAC4 ATP2B4 ANKRD44 NOL4L TSPAN14 ITPKB AUTS2 AC009226.1 CDC14A PATL2 HIVEP2 DENND3 CDK17 RNF125 RGCC ARMH4 SEMA4D JARID2 GRK6 AL356234.2 GSE1 SORL1 CCDC102A DLEU2 GPR68 SUCLG2 ARID5B ID2-AS1 RIPOR2 FLNA ELMSAN1 POC1B TMEM135 NEMP1 CASP9 TSC22D1 CARS2 FYB1 ARHGAP10 IRAK2 PIK3AP1 HECW2 RPS6KA2 AKAP13 COA1 TBXAS1 MAPRE2 SEPT9 SFMBT2 TG CDK13 PPP1R16B PLCB1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: LYST CD247 AL357060.1 ARHGAP26 ARSG ZBTB2 GAS5-AS1 ARHGAP19-SLIT1 AKAP13 AP1S3 MTO1 PPP2R2B IMP4 FAM76B IL1RAP AOAH MYO1F AL390066.1 MARS FBXO16 STT3B PRR5L AC068724.3 SLIT3 TGFBR3 RNF38 SETBP1 XRN1 GTF3C5 RALGDS KLF9 NADK2 MAP3K3 NCOA2 ARRDC3 MRPS27 RORA-AS1 CDYL2 SVIL TYK2 LINC00578 DAAM1 CENPT MED11 STX16 BAZ1A SARAF AL136961.1 KIFC1 FAM107B SP4 LUZP1 LINC01135 AL354696.2 SMAD3 TOMM40L GRK5 PIK3R4 CHPT1 OBSCN ITGB2 SMARCA2 CNOT6L CUL3 ATOX1 MMAB LEPROTL1 NAAA RPS6KC1 CPVL BBIP1 SEC24C RHOH WDSUB1 PDZK1 ZDHHC14 GSK3B KIF21A CCDC38 ST3GAL5 ST8SIA1 AL139807.1 SKI CD74 LPIN1 BCORL1 THUMPD3-AS1 TNIP1 MBOAT7 MKKS SOD2 UBAC2 EVI5L AC097359.3 SPACA6 MEX3C FAM13B SELENOF SRP9 SS18\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 PRKCH APBA2 AKAP13 RUNX1 PRKAG2 ATXN1 SIN3A CCDC88C LPIN2 MSI2 RIPOR2 CDKN1B FAM19A2 CD247 RHOF AC009126.1 FYN MAML3 TOGARAM2 PDE4D HIVEP2 CROCC IKZF3 ZBTB16 KLF13 TTC39C MNT RASSF3 GSK3B DNMT3A SH3KBP1 ITPR1 STIM2 DAZAP2 MAML2 CHST11 SNRK PDE4B ELK3 SSSCA1 PRCP LUC7L2 SEMA4D SSBP4 CERS6 SH2D3C DENND4A DUS2 LINC01588 JARID2 DUSP22 CRIP1 TMEM189-UBE2V1 IL2RB PIP4K2A STIM1 TSPOAP1 TGFBR2 ZEB2 STAT4 KLHL6 LYST TIAM1 ELF1 FAM107B AGPAT4 IFRD1 ITPKB CYTH1 GRK6 STK10 UBAC2 DOCK5 BCL2L2-PABPN1 ERCC1 FNDC3B TBC1D2B FAM102B KAT6B BRF1 CELF2 CDYL FOXP1 RPS6KA2 ZMIZ1 PBX1 PREX1 PTK2B BCL3 IKZF1 RNF125 MTMR12 EIF2AK3 HLA-DMA KIF2A PJA2 SLC2A1 AP001781.2 CD300A\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FOXP1 FYN PRKCH CELF2 TSPOAP1 HIVEP3 ARHGAP26 RUNX1 UTRN UBAC2 CD82 ARHGAP25 RIN3 NFATC2 CDH23 ITPR1 CD247 IKZF1 MIR155HG ATG5 ST3GAL1 AC008105.3 ABTB2 SEPT9 FOXN3 AKAP13 BACH2 NCK2 TCF7 AKNA INPP4A ARID1B PVT1 AUTS2 DOCK10 ASAP1 NOL4L AC068896.1 CDK6 PATL2 LPP PTK2B TRERF1 ELMO1 TIAM2 PLCL2 TTC39C AC016831.7 CHST11 MBNL1 GRK5 ASTL GATAD2A STK10 TBC1D5 ARHGAP31 MIR3681HG DNMT3A ATP2B4 HIVEP2 NCOR2 PIP4K2A ELF1 CARS2 TG CBLB SYTL3 ATXN1 ARAP1 PTMA JARID2 TMEM123 FAM49B EHD1 ELL AL138720.1 MAML3 ETV6 SEMA4D GFOD1 BCL2 AC008667.1 MBP MTO1 NEMP1 ECE1 IQGAP2 HNRNPUL2-BSCL2 RFTN1 LINC01135 IKZF3 ACOXL TRAJ28 P2RY8 SNTB1 AL359736.1 PITPNC1 GSE1 PRKAG2 GALNT2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: KIAA1671 AC068896.1 HOOK2 CCDC88C PRKCH PITPNC1 FOXP1 PNKP IQSEC1 SEPT9 KLF13 CELF2 NFATC2 MIR3681HG MYH9 ADAMTSL4 RPS6KA2 STK10 DNM2 ARID5B ERCC1 HIVEP3 ABHD15-AS1 LINC00861 AC008105.3 PPM1B LINC01588 RGS9 FBRS AOAH KLF10 PATL2 AUTS2 CHST11 PIP4K2A GNGT2 CCND3 MSI2 MACF1 RALGDS EMC9 AMN1 PLCL2 JARID2 ANP32A AKAP13 ZC3H4 MYO1F FAM117A AL136018.1 RAC2 SLC2A1 TMEM143 CD247 SPIDR PTCH1 PCNX1 NR6A1 FHAD1 ALDH1A2 UBAC2 DOCK5 ARHGAP26 C1ORF112 RUNX1 ICAM2 PARP11 TMC6 SBNO2 SLFN12L GFOD1 DYRK1A AC079313.2 ETS1 PREX1 ADAM10 AC010487.3 PTMA RAPGEF1 FOXN3 TNFAIP8 SMAD3 KANSL1 P2RY8 ARHGEF2 IDH1 LYN C11ORF80 SORL1 AL139246.5 AL669918.1 ZSWIM5 CCT8 SH3GL1 NEAT1 FKBP5 ZNF213-AS1 FAM49B JAK1 SHC1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH TG ZEB2 BCL2 FOXN3 AKAP13 EVL ATXN1 RIN3 ITGAE RUNX1 UMAD1 GNG2 BACH2 HIVEP3 FAM107B DRAIC FYN TSPOAP1 LINC01588 RASA3 ZFP36L1 LPP ST8SIA4 FAM49B CD96 FOXP1 AC068896.1 ALDH1A2 RASSF5 KLF13 ITPKB ZBTB16 ARHGAP26 PIP4K2A GPR68 MGAT5 RAB27A NFATC2 ARMH4 ANKRD11 HDAC4 SLC2A1 INPP5D BCOR CELF2 AUTS2 MBNL1 SEMA4D NEAT1 IGF1R ITPR1 GFOD1 UBAC2 ZFYVE28 LINC01004 RAP1A IKZF2 PITPNC1 PTK2B GRK5 CYTIP PATL2 MIR3681HG SYTL3 MAP3K5 RREB1 AL390957.1 RASSF3 DGKD MBP RORA-AS1 ELMO1 HNRNPUL1 ARID5B IKZF1 CBX5 SMAD3 PRR5L ELL ZNF365 GLIPR2 CDK6 STK10 POLR1A MIR29B2CHG SIN3A SH3BP5 TTC33 UPP1 FKBP3 AC016831.7 PRKAR1B MAP3K12 CAP1 TSC22D1 PAG1 TGFBR2 LINC01126 MYO9B\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: HIVEP3 ARHGAP26 PPP2R5C CD247 SMG6 RUNX1 ITGAE DRAIC FAM117A TSPOAP1 TGFBR2 PREX1 NFATC2 FYN PITPNM2 DNAJB12 IKZF3 PRKCH TBC1D5 RAPGEF1 LINC01588 STAT4 TCF7 FKBP5 MNT PTCH1 ERCC1 SKI P2RY8 RBPJ IKZF1 BICDL1 ADGRE5 PRR5L TGFB1 ABHD15-AS1 RALGDS KIAA1671 AAK1 PITPNC1 PLCG2 ANKRD11 UBAC2 NCOR2 LPAR5 RFTN1 ZEB2 PCED1B AC016831.7 PRKCQ PNKP TBL1XR1 DNM2 ZBTB4 ST3GAL1 RUNX3 SHISAL2A MBOAT7 MBP AC009126.1 STAT6 LCORL CBLB YJU2 ANO10 CCDC9 DNAH2 KCTD2 PPP1R16B EPS15L1 DLEU2 KLF6 IL2RB CUBN HCG17 ZBTB16 AKAP13 TG AL139807.1 RASA3 LIPC LIPA CASP8 ARSG ATXN1 AHNAK IQSEC1 CELF2 AL390957.1 SLC25A42 ZFP36 C15ORF53 NHSL2 IQCN IL16 ITPK1 STIP1 DLG4 AC020911.2 CCND3\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 FYN SEMA4D ANKRD44 PRKCH CBLB ATXN1 AC068896.1 RAPGEF1 ST3GAL1 HIVEP2 AKAP13 MBP NFATC2 PITPNC1 MAML2 AL390957.1 LINC01588 SMG6 CCDC88C HOOK2 AC010894.3 ZEB2 SEPT9 UBAC2 HIVEP3 BCL11B ARHGAP26 KLF13 TSPOAP1 SORL1 CAMK2D PIK3R5 IKZF1 IQSEC1 FAM107B AC016831.7 IQGAP2 LPP CELF2 ACOXL RAD51B GNG2 ZBTB16 RALGDS PTPRC P2RY8 TRERF1 ARID1B FOXP1 AC008764.1 PLXNA4 GRK5 STK10 ATG5 PRKCQ CD247 FYB1 TNFAIP8 ABHD15-AS1 ETS1 PRR5L CHST11 UBE2D3 MBNL1 ZNRF2 RERE KLRD1 VAV3 CEP85L FAM69A CDC14A HDAC4 SESN1 LINC01934 RIPOR2 TRAJ28 GATAD2A TECR PPP2R5C ARID5B JARID2 STAT4 MGAT4A PIP4K2A HECW2 AUTS2 OSBPL3 ELMO1 STK17B ZFP36L1 ARHGEF3 IKZF3 STIM1 AL035530.2 MYH9 SVIL GAS7 SMARCA2 EPS15L1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: TCF25 RAN ZSCAN5A MAP4 LIG1 DAP TRNAU1AP GNB1 PCSK4 CAPN10 ZNF217 CAMTA1 AC135178.2 CCDC151 INPP5A MPHOSPH9 ARHGEF19 MBD4 RECQL IQGAP1 SDR42E2 TAPBP TBC1D10B LINC01126 PITRM1 KLF6 SMAD2 FAM129A AC027644.4 FBXL19 STIM1 NRDC EEF1AKMT3 SLC2A3 TAF15 MBOAT7 INTS11 MEX3C OSTC AC009630.1 MAP2K3 COMMD6 BAIAP3 ADAP1 NANS CHKA PCM1 DCLRE1C ILF3 AC010336.1 FLYWCH2 PDE4A TARSL2 NAP1L4 PIM1 MOB3A FIBP SYS1 CARS2 AL590666.2 KCNJ5 C12ORF75 IL12RB1 RPL36 ADGRE3 AC034102.4 PODXL2 C9ORF16 STT3B IFT27 AAMP GCLC SUCO CACTIN FAM118A NHEJ1 CGN POU2F2 BRF1 NRBP1 SYTL2 EHD1 KLF16 EIF3D KIAA0930 ARID4B LRTOMT TMED9 PLCD1 C8ORF58 SMPD1 PLA2G15 OGDH PIAS4 MNT AL360227.1 FBXO5 AC007881.2 ETV4 TNFRSF14-AS1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FOXP1 FYN UBAC2 ITPKB RUNX1 PRKCH CCDC88C GSE1 MAML2 MNT DNAH2 IKZF1 LIPA ELMO1 HDAC4 IKZF3 ARHGAP25 CELF2 TSPOAP1 CYTIP CHST11 AC068896.1 FAM117A RERE ARHGAP26 HOOK2 KLF13 LINC01004 NEAT1 PRR5L HIVEP2 OSBPL3 CDC42SE2 ARID5B AKNA BACH2 CD247 C1ORF112 MIR3681HG SERINC5 SEPT9 RAPGEF1 TRIM8 AAK1 MSN CSGALNACT1 TGFBR2 ANKRD44 MBNL1 VAMP1 AC009126.1 PREX1 HIVEP3 HNRNPUL1 RFX3 IGF2R AKAP13 FAM107B CAMK1D SESN1 BHLHE40-AS1 UMAD1 LIPE-AS1 PTK2B RUNX3 TSC22D3 RAD51B INPP5A CBLB LINC01588 SYTL2 SERTAD2 FNDC3B BCL2 NFATC2 TG GPR137 MXI1 STK10 GRK5 LPXN FOXN3 PRKAR1B DOCK10 MYBL1 NEMP1 DRAIC SCML4 AL035530.2 XKR6 GSK3A KAT6B MALAT1 MACF1 ZBTB16 SIN3A RIPOR2 JADE1 BICRAL VMP1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 ARHGAP26 SNTB1 FOXP1 AL035530.2 CCDC88C UTRN KLF13 PITPNC1 CMIP TSPOAP1 PLCL2 TSPAN14 ZEB2 LIPA PRKCH BCL2 AC068896.1 STK40 HDAC4 STK10 PREX1 AKAP13 CELF2 LFNG CHST11 CCDC12 SEC24C ELL AC016831.7 PLEKHF1 NEAT1 RAPGEF1 PTPRC CROCC FYN LINC00649 TLE4 CAMK2D LPP GRK5 TRAPPC3 ICA1 RASA3 FAM49B ADAP1 ETS1 MYO18A HECW2 BHLHE40-AS1 RIPK1 FAM117A AKNA PPP3CA SCAF11 CD247 CDC42SE2 APBB1IP RAP1GAP2 ARHGAP25 KHSRP ITPKB LRMP DDX60L AGTPBP1 ZDHHC14 THAP4 SLC2A1 ATXN1 SH2D3C MSRA ZNF365 RIN3 ZNF516 MAML2 GPR68 LYN RASSF3 ASAP1 TMEM65 ZNF790 BCL6 SYNGR1 FAM107B PTK2B BCL11B TRABD2A ADGRG5 THADA SMAD3 JARID2 UBE2D3 SERTAD2 RERE MSI2 AL390957.1 VAV3 ICAM2 PAG1 SYK\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PTEN VAV3 ELMO1 KLF7 IKZF1 ARMH4 EPS15 CNOT3 PITPNC1 SLC2A1 PLCXD2 GPR108 TG FAM69A HIVEP3 KLF6 CROCC SETDB2 CELF2 CCDC88C LRRFIP1 CHCHD4 CLEC2B JAZF1 APBA2 AC024592.3 FAM49A MYO1D ARMC9 CCDC151 ZBTB5 RERE PGRMC2 HIST1H4H SPIDR SEC14L1 SYNE1 DLG5 SNX14 AC018647.1 DTWD2 PPM1B TUBA1C ITGAE EHBP1 SH3BP5 ANKMY1 ABHD15-AS1 TOR1AIP2 FAM107B PTCH1 PTMA XPO1 AC022706.1 PPP1CA HS6ST1 DHRS3 EML6 MRPL24 AHNAK DRAIC LRRC1 DARS-AS1 RCSD1 POU2F1 RFFL GAS7 NFE2L3 KLF1 HNRNPA2B1 AC093423.3 TSPAN14 ST8SIA4 IQSEC1 SLC26A2 NR1D1 ANKRD44 RAB27A PSPH C8ORF59 LYN AUTS2 PIM3 IFNG-AS1 NUB1 RPL10 FOXN3 CCDC12 RASSF5 ZBTB38 ARHGAP10 AOAH JAK1 CD247 FNDC3B ELOVL5 LINC00299 AL359922.1 MPRIP SRSF7\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PITPNC1 RUNX1 ITPKB MBP KLF13 LINC01588 PTPRC SMAD3 CCDC88C RIN3 CELF2 XYLT1 FAM107B ZFP36L1 ITK LINC00598 JARID2 AKNA ARAP1 ITPR1 PRKCH P2RY8 LPP PIP4K2A APBA2 AL359736.1 FYN AC068896.1 CARS2 ARMC2 MIR29B2CHG ITPK1 BCL2 AXIN1 KLF9 LINC01126 ARHGAP26 MAN1A1 PIK3R1 EPC1 TTC33 GATAD2A STIM2 PLXNA4 IKZF1 INPP4A JMJD1C LINC02320 POLR1A NFATC2 AL390957.1 MAP2K3 AC010894.3 TOR1AIP2 CD247 STK10 MTSS1 SERTAD2 AC087500.1 RAD51B CYTH3 TRERF1 PLCG2 ARSG RUNX3 AKAP13 AC026202.2 DSE BHLHE40-AS1 TSPOAP1 KLF12 PVT1 SMG6 PLXNC1 ARHGEF3 RGS3 ERCC1 HIVEP3 SPON2 ARHGAP15 GAS7 FAM49B ABHD2 SEPT9 FAM129A HDAC4 PRKAG2 SORL1 PTK2B RPS6KA2 PXYLP1 AC010542.3 DRAIC ZNRF2 AC051619.4 FYB1 AC009226.1 CNNM2 OSBPL3 UBP1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CEMIP2 AC008105.3 HCG27 PREX1 FOXN3 ARHGAP26 MAPKAPK2 AC004551.1 RARA MACF1 PPP3CA AFF1 SEPT6 FAM49B AL139807.1 C4ORF51 AC148476.1 PPCDC CELF2 UEVLD ANP32A PRKCQ DLG4 GSE1 WASF2 TCF20 RHOBTB3 ZDHHC14 XKR6 PIK3CD MSL2 NUMB ZZEF1 IQGAP2 PLCB3 ACIN1 AAAS CARS2 TPP2 FBRS AC024909.1 NDUFV2 KANSL1 ATP8A1 WWC3 HNRNPU FHIT PNKP ANKRD44 LINC01934 UBE2D3 TBC1D2B TOM1 PER1 TSHZ3 NMRAL1 GLTP ABCC1 RORA-AS1 SP3 BLM GTPBP2 FOXP1 KDM4C ST3GAL1 DDX60L NFE2L1 CTSZ RTN4R NT5C3B AC004596.1 RAD52 AMER1 ZBTB4 AD000671.3 AIG1 CMSS1 POLR3A AP5B1 STPG1 ZNF837 C6ORF99 ATP5MC2 TICAM1 CD14 AC073342.1 KIAA1549 PSMG4 SGMS1 SH2D3C GLUD1 SAMHD1 ANKMY2 AC015849.5 AL157400.3 CIC RABEP2 FLI1 RRM2B TBC1D8\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FSIP1 SEPT9 AC008764.1 UBAC2 TSPOAP1 PRKCH RALGDS RAP2A PLXNA4 UTRN STIP1 SESN1 SLC12A6 TFEB CD247 ZFYVE28 PMEL CTSC RASGEF1B MBD6 FNDC3B AC068724.3 MYCBP2 P2RY8 CCDC12 AC020916.1 VCL SH2D3C RRAS RB1 GATAD2A ABCB9 PREX1 RAP1GAP2 LPCAT1 LSP1 INSR STK10 RAD51B FKBP5 DUSP10 CDC14A AC022182.1 FAM222B RAB11B-AS1 RPS6KA2 PRR5L PIP4K2A SEMA4D CCDC88C PDE4D B9D1 SPTBN1 FAM43A CLCN3 TBC1D14 RASSF3 FAM49B TSKS STK4 DRAIC EGR1 RUNX3 LINC00578 ZFR2 GRK2 FAM117A U2AF2 RUNX1 JAK1 FYN TBC1D1 SOS1 EHD1 THUMPD3-AS1 C20ORF27 DNM3 ATP6V0A4 SETD2 AL132671.2 RNF44 ATP10A HLA-DMA AC015819.1 PRRC2B SETD3 DUSP3 RAP1A GNG7 MYH9 AC117394.2 COQ10B STAT4 CXORF40B RFFL AC048341.1 AC013270.1 ABHD15-AS1 AP005329.2 DDAH2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CD247 ARHGAP26 IKZF1 AKAP13 IQGAP2 PPP2R5C HDAC4 RUNX1 FAM49B SPIDR JARID2 SEMA4D PITPNC1 NEAT1 AKNA LFNG FOXN3 CMIP FYN FNDC3B ATG5 TECR SEPT9 LINC01588 LINC01126 XYLT1 STIM2 AC068896.1 CYTH1 CCDC88C PNKP CCND3 RIPOR2 AL359736.1 EVL STK39 ANKRD11 PIP4K2A RORA TG MIDN PTK2B ARID1B MSL2 STK10 UBAC2 LBH GFOD1 ABLIM1 FSIP1 CHST11 SMAD3 ZBTB16 DRAIC KLF13 KIF2A EFNA5 ETS1 AC016831.7 TGFBR3 BHLHE40-AS1 MBP NR1H2 JADE2 PLCG2 AC009126.1 BCL11B HOOK2 LPP GNAI2 AL691403.1 RAP1GAP2 ZSCAN31 NBN TRIM8 ZNF367 RIN3 XXYLT1 PCAT1 VPS13D LINC00299 PDE4D MBNL1 DNM3 ANKRD44 PREX1 LRCH1 ARRDC3 SERTAD2 GSE1 HOMEZ RUNX3 GPR68 AC008014.1 BCL9L AL390957.1 ABHD15-AS1 RAP1A ICA1 DGKD\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 GATAD2A PRKCH ST3GAL1 SEMA4D ARHGEF3 PIP4K2A SEPT9 CCDC12 DRAIC PIK3R1 MBP IL2RB KLF13 AC068896.1 PPP1R16B CD247 CMIP RASA3 TBC1D5 JARID2 PDE4D FYN MIR3681HG CDK6 IKZF3 TNFAIP8 NFATC2 RGS3 APBA2 CHST11 PRKAG2 AUTS2 DGKD HDAC4 POLR1A FYB1 BCL9L TTC33 XYLT1 FAM49B HIVEP3 TLE4 MGAT4A ETS1 ST8SIA4 AL359736.1 PRKCB ERCC1 RAPGEF1 SIN3A AKNA CCDC88C AL390957.1 STK10 ZFP36L1 NOL4L P2RY8 TGFBR3 ABHD15-AS1 LINC00299 AC022075.1 RUNX3 PATL2 ANKRD11 ATG5 AC008014.1 KLHL21 UMAD1 TBC1D1 LMTK2 IQGAP2 LIPA ZFYVE28 QKI TXNRD1 IKZF1 RIPOR2 SLC38A1 ZEB2 FOXP1 ITPKB ELL AAK1 PTK2B PEX14 SH3KBP1 FSIP1 AC022916.1 MSI2 ELF2 SORL1 IQSEC1 MBNL1 SFMBT2 SLC25A26 LPP OTULIN AC010894.3 CDC42SE2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRRC2B RUNX1 SORL1 C19ORF54 PPP2R5A ATG5 GFOD1 ARHGAP15 CEMIP2 SCML4 ELMO1 AKNA AC010323.1 LRCH1 MRPS27 MAP3K3 ARF4 LIMD1 PPP1CA TRIM24 TMEM269 FYB1 MNT ANKRD44 AL138720.1 CMTM7 VCP BCR TREML2 DNAJB12 SLC25A26 KDM4C CCDC47 HNRNPUL2-BSCL2 MCOLN2 SCYL3 LIX1-AS1 CIC MYLPF IGF1R PRTFDC1 AC009126.1 ERCC1 TRIP12 EMC3 THOC7 EIF4E1B CCNL1 SPAG7 ADRM1 ADAM10 SAP130 PTEN TAF6 QRICH1 TCF25 BCL2L1 FNDC3B NOD2 ATG16L1 AC092718.8 STK24 THAP1 APOLD1 LYSMD2 SYNJ2 HDAC4 SRF GDF5 HIST1H2BH SREBF2 POLR2J3 UBE2D3 ZNF367 PNKP PPP6R1 TOM1L2 GON4L NEPRO MATN1 PARVG PPP3CC XYLT1 EBPL UMAD1 UBXN4 GMFG ACTN4 IQCD NXF1 ESR2 SMG6 MMS19 KATNB1 RPS12 TAF10 TRAPPC6B CTBP1 MAN1A1 AC018647.1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH RNF167 LINC01126 ITGAE ATOX1 C8ORF37-AS1 UMAD1 HOOK2 CXXC5 SMG6 HDAC4 PIP4K2A GRK5 AC068896.1 STK10 LMNB1-DT GNG2 LINC00649 CDC42SE2 AC008691.1 MYBL1 MAPRE2 TLE4 SEC16A TBXAS1 EFNA5 ARHGAP26 MDFIC XYLT1 AL139807.1 AC008124.1 OARD1 U2AF2 RUNX3 PIK3R5 RORA-AS1 B4GALT1 AC120193.1 FBXW11 RBMS1 TTC33 DYRK1A PLXNA4 MLLT3 SLC3A2 SH3PXD2A ETS1 NBN TSPOAP1 BICRAL ANKRD44 MBP ITK ZBTB2 LINC01588 DLEU2 VAV3 HIPK2 PPP1CA BAZ2A FAM107B FOXP1 LPP TOGARAM2 SLC25A26 BHLHE40-AS1 ATP5PF PCED1B FYN NR6A1 AL162231.2 KLHDC3 RHOH ZBTB20 MAP3K12 PLCB1 NDUFAF6 HLA-DMA LCP2 SH3BP5 TRAF1 RIN3 PATL2 BATF FBRS CSK LINC01004 JMJD1C GSK3B NFKBIA MPHOSPH8 IMMT WRNIP1 ZNF699 TGFBR3 CCDC88C ZFP36L1 AC008667.1 ATG7 DNMT3A\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH ARHGAP26 MBP CD247 CELF2 AC068896.1 AL359736.1 BCL6 RUNX1 AC015849.5 INPP4A JARID2 SEMA4D ATG5 NEAT1 LINC00299 NCOA7 LINC01934 APBA2 ADGRG5 ARHGEF1 CROCC STAT4 NMRAL1 ASB2 RUNX3 RASSF5 ATOX1 NEMP1 ABHD15-AS1 RAPGEF1 TGFBR3 ZBTB16 MAP3K3 ITK ATXN7L1 DYRK1A NFATC2 FYN RIN3 CMIP RASSF3 BCL2 ZFP36L1 ITPR1 NRL LINC01135 EPC1 CDC14A PLEK PITPNC1 FAM107B IFNG-AS1 BACH1 GATAD2A VAV3 RETREG2 WDR74 PRKCB HNRNPUL1 PTPRE FBRS RB1 CDKN1B GTDC1 SIN3A AKAP13 LCP1 SEC31A CBLB AC016831.7 GRK5 KANSL1 NEK7 AGTPBP1 ACOXL BCOR HIPK2 PLCB1 STAG2 RGS3 EPHA4 UMAD1 WDFY2 GNS PDE4D AC008403.1 ANKRD44 DNAH2 MBNL1 LINC02240 CDC42SE2 HNRNPUL2-BSCL2 DOCK5 ARID5B TRERF1 CARS2 GPBP1 ZNF384 PRPF40A\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FOXN3 PRKCH FYB1 LINC01588 RAD51B ARMH4 CXXC5 TSPOAP1 LCP2 RUNX3 HDAC4 PLEKHA2 HOOK2 CD55 LPP CELF2 UBAC2 FOXP1 PLCG2 FNDC3B KSR1 NLRC5 RIN3 ITPR1 TRAF1 MAML3 ANKRD11 PIK3C2B ECE1 DLEU2 TRABD2A POU2AF1 TG PPP3CA MRPS27 TTC33 SEPT9 EPHA4 ARHGAP26 PTK2B MIR3681HG ANKRD44 TRERF1 AL390957.1 CHST11 TBC1D5 PLCD1 PITPNC1 RUNX1 ITGB2 CROCC NSMCE1 XYLT1 C1ORF112 IQSEC1 NFKB1 CCDC88C JOSD1 LINC01004 BHLHE40-AS1 MBP PTPRJ AC016831.7 PRKCE PIK3CD LYN ZBTB20 ITGAE SPAG1 ELMO1 NFATC2 AGPAT4 DAP RARG THUMPD3-AS1 TNFAIP8 ZSWIM6 FAM49A ACTN4 AL160408.2 L2HGDH ELMSAN1 PRMT1 MXI1 LINC01934 ELF2 LARP1B MACF1 HSPD1 LYST MCF2L2 BCAR3 UBASH3B FASLG ZMIZ2 CAMTA1 ZMIZ1 MIAT EHD1 SP4\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 CDC14A CDH23 ACSL1 TRABD2A ITGAE MBP SCML4 AL136985.3 MIA2 STAG2 UBAC2 VMP1 NHSL2 MCM3 SYNJ2 MIS18BP1 CEMIP2 NAPA RASSF5 AC243829.1 RAP1GAP2 KLF9 TLE1 AL669918.1 PRDM2 ETS1 TCF25 GAS7 TOR3A TMSB4X AL139383.1 ATP13A1 SLFN12 BHLHE40-AS1 HNRNPL CMIP PNKP RUNX3 SCUBE1 SH3KBP1 SLC37A1 CD247 ARHGAP26 PATL2 PRKCQ RALGDS LINC02288 PCIF1 ATXN1 BCR KIAA0319L ADARB2 AK2 ARHGAP10 PLCB1 MGAT5 FOXP1 TGFBR3 LRRFIP1 CASK TMEM189-UBE2V1 PLEKHA1 AL034549.1 ITPKB GRIK4 GNAT2 PHIP ITGB1 MDC1 NOM1 PROCA1 MRPS36 CHST12 ZNF569 CD44 PIK3CD ZNF365 CMSS1 PIM1 ATAD3A SETDB2 SYTL3 OXNAD1 MMADHC CD226 RMDN3 ARHGEF3 FGGY HEG1 SYTL2 CFLAR DPYD MTFR1 TBC1D19 CD69 FBXL19 WDPCP ACTB DOCK5\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 RUNX1 IKZF1 CELF2 SEMA4D AUTS2 ANKRD11 MAML2 AC068896.1 IQCN PREX1 LPP PLCL2 IKZF3 CCND3 AKAP13 PPP1R16B PCED1B FOXP1 PATL2 PRKCH NCOR2 CDK6 FNDC3B FAM117A ASAP1 HEG1 ZBTB16 TRANK1 MIDN FOXN3 TET3 TNIP1 PRKCQ FYN MIR3681HG KAT6B MBP HDAC4 TBXAS1 ADCY7 IQGAP2 ACOXL RAD51B CAMTA1 KIF2A IFNG-AS1 CIC CXXC5 AL390957.1 ZFP36 PPP2R5C ZFP36L1 DDX6 ETS1 GATAD2A ATOX1 NKIRAS1 NFE2L3 PIP4K2A TNRC6B XRCC1 RAP1A CFLAR ZNF516 CHST11 HOOK2 CDC42SE2 ITPKB ANKMY1 RIN3 GFOD1 FAM69A XKR6 ARMH4 KIF13A ATXN1 CMIP FOXO6 LINC02416 BICDL1 KHNYN TNFAIP8 RARG AC009226.1 ID2-AS1 HIP1 BACH2 KLF6 LIPA SSSCA1 ZNRF3 RUNX3 DUSP10 MYH9 MIAT UBASH3B RERE ICA1 BIN1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCQ IQSEC1 PRKCH DRAIC PREX1 FOXP1 PLCB1 BACH2 UBAC2 CCDC88C MBP PRKAG2 AL390957.1 FYN ARSG RAD51B CRADD SKI LPP LINC01126 RAP1GAP2 GATAD2A ETS1 BHLHE40-AS1 PLCL2 MAML2 GLS ELMO1 ATXN7 LINC01588 GAS7 MAN1A1 MTSS1 AC068896.1 RIN3 PITPNC1 TSPOAP1 KLF13 ITK CD226 ACOXL SORL1 CNOT1 PIK3R1 TNFSF14 DTX1 GNLY RMND1 IFFO2 HIVEP2 PLXND1 DNM2 IKZF1 BCLAF1 CMIP ING3 FAM117A OGDH AL359736.1 SPIDR SLC39A10 AC009126.1 PLEKHG3 PLCG2 GTPBP6 ARHGAP26 MGA ERCC1 AKAP13 KAT6B CMTM7 CELSR1 CAPZB CCDC12 SEPT9 ARID1B MSI2 PIP4K2A SMIM2-AS1 DOCK10 MKLN1 TG OSBPL3 HDAC4 MAPK1 PCNX2 AL928654.3 ZEB2 IKZF2 LFNG RAC2 ITPKB GNG2 TGFBR3 NCOR2 VPS9D1 IRAK2 PPP2R5E LINC01135 FHAD1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CHST11 RAD51B FYN SERTAD2 TSPOAP1 DRAIC AC016831.7 ERCC1 IQSEC1 UPP1 UMAD1 SORL1 ZNF131 ACTN4 AC068896.1 LPP ANKRD44 JAZF1 SFMBT2 TLE4 AKAP13 DOCK10 EPHA4 TET3 ITK SMG6 UBE2D3 LINC00861 POU2F2 EFNA5 PCF11 MSI2 SEPT9 TGFBR3 ARHGAP26 CHD4 BTBD9 GNLY FAM107B CELF2 ARHGEF3 CEP85L NOL4L APBA2 TBC1D5 AC008764.1 LINC01185 KIF2A FYB1 PRCP PLCB1 MAML2 IL2RB AC010894.3 FOXP1 LIPE-AS1 ATXN7L1 AC022126.1 PRKCA TXNRD1 PTK2 RAP1A DYRK1A GRK5 LEPROTL1 AC069368.1 RASA3 IL21R CBX7 KLF13 AGPAT1 MAP3K1 AKAP11 BCL2 FOXO3 HDAC4 AAK1 MGAT4A AC018647.1 AC008014.1 BBIP1 PRF1 SLC12A8 PTPRE RIN3 AC022075.1 ITPR1 CD44 AC006369.1 CXCR4 PTK2B FLYWCH2 AL035530.2 C1ORF112 ZBTB2 TPD52 OTUD5 PIGN PFKFB3 PSD4\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]

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