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[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CCND3 CD247 FYN RIN3 RORA-AS1 ANKRD44 PDE4B MBNL1 ITPKB SORL1 LCP2 PIP4K2A RAPGEF1 TSPAN14 POLR1A RUNX3 RUNX1 ATXN1 PREX1 AC068896.1 SLC2A1 RHOH PTK2B B4GALT1 RIPOR2 SEPT9 TTC39C SMAD3 MICAL2 RORA ATG5 ARHGAP26 SCML4 SNTB1 PTPRC PITPNC1 AKAP13 MAST4 NRL AC016831.7 ARHGEF3 KCTD7 PRKCH DUS2 AC018647.1 FYB1 SYNE1 KLHL21 KLF13 OSBPL3 ANKRD11 PRKCA ETS1 LPXN POC1B ARHGAP25 MAN2A1 LBH STAG1 IQSEC1 LINC01137 G3BP2 UTRN PATL2 RAP1A UBAC2 FLI1 ITK P2RY8 CDK13 AC009126.1 CYTIP KDM2B CBLB DOCK9 PIK3R1 FNDC3B OTULIN NID1 SPEF2 ELMO1 MAML2 GNG7 HDAC4 TCF7 ZFP36L1 GLIPR1 KLF11 MGAT4A ARHGAP15 RET ST8SIA4 CDC42SE2 RAB27A MRPL33 MIR3681HG MTSS1 ATG7 EVL VAV3\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH AKAP13 ARHGAP26 PDE4D CYTIP RASSF5 ITK HDAC4 ZBTB16 AKNA PPP3CA AL359736.1 ARID5B NFATC2 MVB12B PREX1 ARHGAP25 SNTB1 MGAT5 MYH9 LPP RPS6KA2 SMAD3 BCL11B UST FUT8 LRP2BP FYCO1 TCF7 C6ORF62 CD247 MGAT4A PAG1 RBMS1 HIVEP2 CDC14A RAPGEF1 AC068896.1 FAM107B FOXP1 TSPAN14 PITPNC1 ST6GAL1 XYLT1 NFIA LCP2 BRD7 LINC01431 TSPOAP1 SOD2 AC016831.7 FYN AL357060.1 SCML4 ATXN1 SLC38A2 PPP2R2B ZNRF2 AL591885.1 NCOR2 LINC01126 SEPT9 CDKN1B PTPN22 STK40 IL2RA AC006369.1 ERCC1 TBC1D5 GTDC1 STIM2 TNFAIP8 NCALD UTRN SMARCA2 PLCL2 AGFG2 CBLB CAB39 ARHGEF3 CD96 STAT4 AC068724.3 ZMIZ1-AS1 GATAD2A PRKAG2 HECW2 ZNF516 RNF111 IKZF3 SESN1 LINC00299 TC2N IL21R MBP FKBP5 ZCCHC2 TGFBR3 TSPAN5 EHD4\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 AC068896.1 RUNX1 RORA-AS1 MBP FYN AKNA ATXN1 IKZF1 UBAC2 AKAP13 BCL11B TSPAN14 KLF13 MTO1 RUNX3 BORCS5 RB1 MIR3681HG PIP4K2A PRKCH UTRN CCDC88C RHOH STAT4 IQSEC1 ANXA11 SMAD3 NCK2 TRIM8 HIST1H2BC CDK6 TBC1D1 ITGAE AC022075.1 MICAL2 RIN3 MGAT5 OXNAD1 CBLB STK10 HDAC4 ATF7IP SEMA4D RORA ABLIM1 ARHGAP15 ITK PLEC ATP2B4 LINC00861 STK17B CD58 TPRG1 GPR68 LINC01588 AC010894.3 AC016831.7 SYTL2 CHST11 AC093010.2 MCTP2 LINC01934 SCML4 IRAK2 IFNG-AS1 SLC6A6 PRKCQ CEMIP2 LPP ANKRD44 DDX3X JAZF1 ARL4C LBH GTPBP6 EHD1 PPP2R5C LFNG PPP1R21 ETS1 SNTB1 NEAT1 BACH2 C6ORF106 JMJD1C IQGAP2 UBXN11 STK24 CELF2 HIST1H4B HIVEP2 HERPUD2 MED12L MGAT4A CYTH3 PTPRJ RAPGEF1 ARNTL ACOXL\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 RUNX1 CCDC88C PRKCH LINC00649 ITPKB FOXN3 AC068896.1 UBAC2 GPR68 KLF6 RAD51B SGMS1 AL390957.1 RORA-AS1 AKAP13 IKZF1 PTPRJ RIN3 TBC1D2B NFATC2 TRERF1 APBB1IP TBC1D5 FOXP1 RIPOR2 RB1 DOCK8 KIF2A UTRN CBLB MAML2 KLRD1 DNM3 MGAT5 PPP2R5C AL160408.2 HMGB1 PREX1 AL031056.1 KLF13 ARHGEF3 FGD3 P2RY8 ZBTB16 CRYBG1 HDAC4 BPGM MSI2 DLGAP1 LDLRAD4 LCP1 ZCWPW1 SLC25A26 RPS6KA2 DYM CD96 AL591885.1 SEPT9 CRTC1 ARSG YTHDF3 LBH AL356234.2 AC008897.2 ECE1 STIM2 ARMH4 TG AL023755.1 FYN MCF2L2 ATG5 CD82 FRYL AC093010.2 CCR2 LFNG IKZF3 TCTN1 HECW2 CCDC12 CNOT3 IQGAP1 TIAM2 PTPN6 CYTIP BCR AC079313.2 ATXN1 CAMK1D RERE CADM1 ITK ATXN7L1 FAM117A UBASH3A ST8SIA1 IQSEC1 MEX3C\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ANKRD44 CAMK2D ARHGAP26 TMEM163 STK10 NFKBIA SEMA4D HMSD AC010894.3 MEX3C IFNG-AS1 LFNG CD2 ZMIZ1-AS1 RASSF5 KANSL1 N4BP3 CYB5R4 RBMS1 HECW2 AL121594.1 SETBP1 PIK3CB MAN2A1 CBLB PIP4K2A LRP3 FOXN2 CD28 METTL21A ARHGAP15 JAK1 NFE2L2 MXD1 AL031599.1 IQGAP2 RTTN PSD4 FYN GMDS ENTPD3-AS1 KIAA0391 CD79A GALNT1 ZNRF2 UBAC2 ARSG AC093627.5 CARS2 DNAJB14 INTS9 ASF1B RPA2 FBXO32 MGAT5 DYNC1I2 HINT1 EIF4E1B ARF4 CCDC126 GLS EMC2 UHRF2 STAT4 HPCAL1 FAM117B RAPGEF1 KLF13 PLXNC1 SRCIN1 USP3 CMIP NUDT18 MAP3K20 RNF170 TTC13 AC243829.4 FOXO3 IKZF1 DNPEP AL035530.2 OSTM1 DNM3 FAM177A1 CDYL GRK5 ATF2 NARS LINC02288 GAS1RR TRIM24 N4BP1 GPLD1 GAS7 HIF1AN AC016831.7 LINC00861 TUT4 PLEKHF1 RPS6KA2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 PIP4K2A PITPNC1 AKNA CBLB PRKCH HIVEP3 CCDC88C LPP LINC01126 FOXP1 CRYBG1 TRABD2A STK10 ATXN1 PRKCQ RAD51B DRAIC AKAP13 LCP2 RIPOR2 CARD19 CRADD CCNG2 ITPK1 TMEM116 GRK6 KLF13 CD226 DNAH2 GNG2 CPOX HIVEP2 AC008764.1 GRAP2 TRAJ28 EVL SYNCRIP FAM49B RUNX1 AGPAT4 FGD3 ARHGEF3 ZFYVE28 LCP1 CDC14A DDAH2 JMJD1C SNTB1 STAT4 UCP2 IQGAP2 FAM117A IKZF1 ZNF831 AC068896.1 RASSF5 GPRIN3 AC009126.1 PATL2 INPP4A PHF19 ZEB2 STPG1 ENTPD1-AS1 PDE7A ATXN7L1 RORA LINC02328 AL163932.1 MAP4K4 NAPA ASTL SIN3A AC025283.3 FAM107B PPP2R5C ST3GAL1 LINC01004 CHST11 AGBL1 PTK2B MCF2L2 PWWP2A ENO1 PTP4A1 ITPKB CELF2 ATG5 MTSS1 CCSER2 TNFAIP8 LINC00598 AL359736.1 PPP3CA UGDH CD247 PCAT1 TOMM70 TTC33\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: UBAC2 CELF2 AKAP13 MSI2 PRKCH RIPOR2 SEPT9 LBH TIAM1 BCL2 RASA3 HIVEP2 AKNA MAD1L1 ARHGEF3 MBNL1 CDC14A BACH2 IKZF1 MTSS1 RUNX1 MACF1 ARID5B RBMS1 PPP1R16B MBOAT7 LINC01588 DNM2 TSPOAP1 PPP6R1 C15ORF53 NEAT1 HNRNPL RIPOR1 AP001107.3 ABTB2 HDAC4 BRF1 HMGB1 AL357060.1 KDM2B PITPNM2 FOXP1 CSGALNACT1 PAG1 PTMA AC009226.1 PIP4K2A IMMP2L HOOK2 FARS2 TBL1XR1 AC093423.3 BMF ELMSAN1 IQSEC1 HDAC7 AC010271.1 MAML2 MAPRE2 LINC00598 PXYLP1 SAMD3 ATXN1 MAP3K3 HIP1 HLA-DMA ARHGAP4 ZMIZ1-AS1 FKBP5 ACOXL KANSL1 LINC01126 SIK3 ECE1 ARHGAP15 PAQR8 MARCH3 SEMA4D EPHA4 TG LINC01431 ANKRD44 RAPGEF1 OSBPL3 ABHD15-AS1 MPP7 WNT10A NUTM2A-AS1 TNFAIP8 KLF13 VOPP1 MGAT5 SH3KBP1 TMEM123 CYP51A1 AOAH TOX LINC01934 GYPC\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH SEPT9 HIVEP3 ATXN1 UBAC2 AL359736.1 RUNX1 ZEB2 ATG5 PCGF5 FAM107B LINC00271 ARHGAP25 SIN3A STK10 FOXP1 RIPOR2 FYN SCML4 SAMD3 FOXN3 AP000311.1 LCP2 DNMT3A PTPRJ AL390957.1 BCL2 CCDC12 SEMA4D ICA1 AC020911.2 ARHGAP26 HDAC4 AC068896.1 PCED1B FAM49B MDFIC TSPOAP1 TNFAIP8 GAS7 HNRNPF RAPGEF1 PTPRC MYO1F MAP4K4 APBB1IP ITGA4 ZMIZ1 ATOX1 RAP1A CCND3 AP000295.1 SORL1 RALGDS MYO18A CBLB AL121748.1 IKZF1 SLC25A26 RPS6KA2 AP000787.1 BACH2 APOLD1 XYLT1 NCOA2 RBMS1 MBP FAM98A TBC1D1 LINC01126 ADGRG5 NR3C1 FBRS CDC25C MAP3K14 LPIN2 LINC00578 GSK3B ITGB2 KLF13 SH3BP5 CSNK1G3 ARHGEF3 ITGB1 CHST11 NEMP1 MAML2 LINC01934 AKAP13 PRF1 ACOXL TG GGA1 PLCL1 TRERF1 AL138720.1 RORA CDCP1 DRAIC AL357060.1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CD247 ARHGAP25 RIN3 PREX1 AC068896.1 ANKRD44 PIP4K2A ARHGAP26 AKNA FYN CCDC88C PRKCH AC016831.7 NCK2 CELF2 AKAP13 ASAP1 SMAD3 ITPKB RORA PLEK AL035530.2 AL355512.1 CDC42SE2 KLF13 NEAT1 DOCK10 BCL2 INPP4A ZBTB16 LINC01588 RNF216 TSPAN5 RASSF5 PATL2 GATAD2A ACOXL UMAD1 RUNX3 MEF2D JARID2 ARHGEF3 PTPRJ TTC33 TET3 STK10 LCP1 RIPOR2 MAPK1 SEPT9 ZNF365 MAP3K8 C2ORF42 UTRN ATP2B4 ETS1 STK39 SLC2A1 CYTH1 PTK2B TGFBR2 GPR68 STAT4 CCDC6 FOXP1 EIF5A ZMIZ1 CAMK1D KLF9 IQGAP2 DNMT3A RAPGEF1 NFE2L2 ARID1B GTDC1 ELOVL6 LITAF CFLAR FAM102B BBX SETBP1 SIL1 SESN1 CAPN2 ITPR1 CARD19 RAB11A UBAC2 AKT3 PTMA IL2RA AC093010.2 ATG5 DIAPH1 PPP2R5C STIM1 ZNF131 SH3KBP1 MLLT3 AP3M2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AC068896.1 AKAP13 ARHGAP26 MBP ST3GAL1 IL7R PRKCH RUNX1 STK10 SCML4 LINC01588 RAPGEF1 HIVEP3 HDAC4 CDC42SE2 FYN ARHGAP25 ANKRD44 CD247 CASP8 CDH23 RIN3 PLXNA4 RPTOR FYB1 KLRD1 CBLB AC117394.2 SKI CD96 BACH2 PPP2R5C SEPT9 TRERF1 RORA-AS1 PIP4K2A ZNF609 ATG5 AC099673.1 JADE1 JMJD1C PATL2 NLRC5 CPEB2-DT PTPRJ PLCD1 TSPAN14 ZNF365 ADGRG1 CDC14A GTPBP6 KLF13 CLYBL STOM FOXP1 IQSEC1 RALGDS SMAD3 ZBTB20 NCOA2 AC016831.7 NR4A2 PRR5L KDM2B AUTS2 TBC1D2B PAG1 SEMA4D CMSS1 WWOX PRR5 IQGAP2 LPP SNTB1 FAM69A RIPOR2 SLC2A1 ADAM10 CARS2 PPP3CA ACOXL CELF2 RORA ELMO1 ZEB2 AL669918.1 GPR68 DENND4A IL21R AL035530.2 HNRNPA2B1 TOGARAM2 MAP3K3 DSE HMGB1 OGDH BORCS5 MBNL1 TG CDYL\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 IQSEC1 RUNX1 ADGRG5 OR6N2 RHOH RAP1A TLE4 JMJD1C PIM3 AC068896.1 HOMEZ MCM7 PRKN FHAD1 RASGRF2-AS1 HDAC4 AMZ1 ATG10 PPP1R16B SPAG1 RELB LINC01215 ARHGAP15 AC079950.1 MTO1 ERCC1 ITM2C IBA57 GALNT2 NR4A2 ANTXR2 TMEM245 AL138752.2 NFKBIA KRI1 CD82 ZBTB16 IFI27L2 BACH2 THAP12 SERINC3 TOM1L2 IL7R APBB1IP LYN RIPOR2 ARID5B CD96 LCP1 TBL1XR1 SLC15A4 SSBP2 CMIP B3GLCT GTF2H4 FAM85B AL078459.1 NUBPL PIP4K2A AC090527.2 INPP4A SMG6 FAM117A AL139412.1 PVT1 CTH ANKRD10 RUBCN DDX60L AL390957.1 PPP1R10 CRACR2A DNAJC15 CCDC88C NFYC ST3GAL2 KIF22 AC137810.1 TMEM131 ESYT2 TRAPPC10 AMBRA1 TFB2M BBC3 HECTD4 CD300A TRPM7 RASSF5 MTSS1 CARS2 DMAC2 CDV3 STAG1 HNRNPUL1 CHCHD6 PCGF5 IPO13 FAM102B ADAP1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 ARHGAP26 PRKCH AC068896.1 LINC01588 PTK2B PTPRJ SEMA4D MBP DOCK10 ATXN1 HIVEP3 RPTOR ARSG CD247 DRAIC STAT4 SEPT9 TRERF1 KLF13 GRAP2 AKNA MSI2 ZEB2 C15ORF53 PIP4K2A ITGAE ANKRD44 GAS7 MACF1 CDC42SE2 NOP14-AS1 UTRN FAM129A PATL2 IKZF1 FYN MAML2 KCTD16 TNRC6B ITPR1 RAPGEF1 HMGB1 AC022126.1 MGAT4A LCP2 NCK2 LINC01004 NFATC2 MBNL1 RIPOR2 EBAG9 HOOK2 PVT1 PKIG ITPKB SPIDR TRAJ28 TSPOAP1 IKZF3 TGFB1 LPP TBC1D5 STIM2 SUSD3 CYTIP AL162377.3 DLGAP1 PITPNC1 GTDC1 PLCXD2 AKAP13 EPAS1 PREX1 SETD2 AL132671.2 AL357060.1 CIC C8ORF59 BCL2 AP000311.1 NF1 P2RY8 ELL TGFBR3 FOXO1 CFLAR SLC11A1 GRK5 MXI1 LSP1 RNF38 AL390957.1 SMG6 IQGAP2 AL359736.1 OSBPL3 NFE2L2 AFAP1 SMAD3\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: TSPOAP1 ARHGAP26 ELMO1 TRABD2A IKZF1 AC068896.1 ITK TNFAIP8 RIPOR2 SEMA4D UTRN RGS9 FYN STK10 PLXNC1 CD247 NEMP1 PRKCH CCDC12 NR4A2 LPP CYTIP RGCC AC008124.1 CCND3 MAML2 SERTAD2 RGS3 ZAP70 RBM6 ID2-AS1 TNRC6B ATG5 TBC1D8 PLXNA4 RORA ABCG1 GATA3 HIVEP2 RORA-AS1 CLIC3 MBD1 SPEF2 FAM107B NFATC2 ZBTB20 AC006369.1 CRACR2A RPS6KA5 PXYLP1 ARSD RARA SEC22C AK9 STAT4 GFOD1 GLO1 ST8SIA4 NT5C3A MGAT1 CDC42SE2 CIITA AL160408.2 BCL2 RUNX2 ZFYVE28 FHOD1 SRSF3 ANKRD44 ITPR1 PTPN6 NCOA7 CHST11 LPCAT1 C15ORF53 AC099063.1 FMC1 TEX30 ATXN1 GGA1 PPP2R5C LINC01126 ARHGAP15 CD55 CHI3L2 TECR RUNX3 C19ORF54 AKNA AC022126.1 TBC1D2B LINC00426 UMAD1 UBP1 MED12L P2RY8 SMG6 AC231533.1 AP000781.2 SP4\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RAD51B RUNX1 FOXP1 UBAC2 BCL11B PRKCH MTO1 UBXN11 CDH23 HCG25 C1GALT1 RPS6KA2 RMI2 PIK3R1 CASP8 ZNF609 SERTAD2 LDLRAD4 SEPT9 TNFAIP8 ITPKB DLEU2 PDE4B LINC01588 CNNM2 EARS2 RNF8 SORL1 EPC1 TFPT IGSF9B PIK3R5 AC005726.1 RORA UBASH3B SH3PXD2A PIM1 BNIP3L MAN1C1 AC068896.1 SARS2 NPAT ENPP2 AFAP1 AC137810.1 CELF2 PPAT GATA3 FAM49B AL365259.1 HIVEP2 CCDC88C ARHGEF3 ADGRB1 STK40 CHST11 SEC23B LEPROTL1 ZNF846 CD247 NFE2L2 PRKAR1B MAP3K3 SUCO KLHL21 ARHGAP15 RASSF5 UXS1 RPL13A CORO1A AXIN1 FAM76B CHD9 MAN1A2 STT3B XPO6 GNAI2 CSGALNACT1 PPP2R5C STK17B UMAD1 ABCB1 INPP4A COX11 PTPRJ AP005329.2 CD96 CHMP7 FNDC3B ST3GAL1 PTK2B GPR68 SERINC5 GPRIN3 AC011498.1 PCNP CATSPERG ELF2 AL031599.1 RPTOR\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 AKAP13 PRKCH ETS1 AKNA MBP RPS6KA2 TNFAIP8 FAM49B AL359736.1 FAM107B IKZF1 LINC01588 RASSF3 KLF13 JMJD1C UHRF2 ARHGAP26 AL023755.1 SLC25A26 ZEB2 LBH CD226 KLRD1 FYN ATXN1 RUNX3 ARHGAP10 MBNL1 BICRAL SPIDR RASGEF1B ZBTB2 FYCO1 UBE2D3 PPP2R5C MAML2 PRR5L ITGAE CD247 DNPEP LITAF PRKCQ ASTL PCED1B EVL SETBP1 ZBTB20 AC008124.1 ZNF365 CHST11 AL355512.1 CADM1 SCML4 NFATC2 AC009126.1 PIP4K2A LINC00598 SEMA4D NPAT ABHD15-AS1 DLEU2 LMAN1 MAN1A2 CDC42SE2 CYTH3 STK10 MTO1 ARL4C DUSP22 PPP1R16B AHR TRERF1 ITPKB RIN3 TMEM131L IL7R DGKD ATP2B4 NR3C2 TSPAN5 LINC01004 PATL2 ITPR1 LIPA SERTAD2 COQ10B MXI1 JARID2 RABGAP1L KIF2A ST3GAL1 OSBPL3 FOXP1 CASK TNIK HDAC4 MYOM2 ZBTB7A TRAPPC10\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: TNFAIP8 KAT2B SGMS1 CELF2 TPRG1 CTSC ARID5B LINC02068 ZMIZ1 AC099673.1 AHR CAMK2D OTULINL STK17B AP000787.1 HIVEP2 ATP8A1 KLF12 SPIDR GALC RGCC MTO1 KDM2A AL031599.1 MCF2L2 NAA16 TBC1D5 STK32C MBNL1 SEC22C TOMM7 PNPLA8 NIN PLRG1 AL359736.1 AC078883.1 QKI TSC22D1 PDCD10 VAV3 CHIT1 NEK7 NFATC2 NIPBL PHF19 LTBP1 APP AL139807.1 SSBP2 AC007384.1 LINC00850 PLXNC1 GBE1 TTTY15 ST8SIA4 HNRNPK ATP5PF SGK3 ENKUR TMEM131L CD96 DNM3 CUBN C21ORF91-OT1 AC078923.1 MYBL1 ICOS PEX2 RASGEF1B IRF2 RPS6KA2 DIAPH1 INPP4B STARD4 VCPIP1 AKNA C2ORF76 AC035140.1 DHFR RAB27B MAN2A1 LINC01655 ERN1 AL359710.1 RHOBTB3 ZHX1-C8ORF76 ZCCHC2 CCDC47 LINC00862 DCUN1D4 VMP1 CASP1 SLC39A10 CYTIP MAP4K3 TEX10 PKN2-AS1 DOK2 CEMIP2 CLK2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH AKNA RUNX1 LINC01004 MACF1 BCL11B RUNX3 AC018647.1 SEPT9 PIP4K2A AOAH HIVEP2 PTPRC TRERF1 ZBTB7A SCML4 FYN CCDC9 TNFAIP8 ETS1 LMO4 PNKP RNF44 DLGAP1 IQSEC1 FAM118A LINC01126 AC093010.2 CBLB DSE CBFA2T2 AGPAT4 CCDC88C PPP3CA PLAC8 RPTOR RUBCN JOSD1 HNRNPC BHLHE40-AS1 CBX7 RPL7L1 LYST AC016831.7 FYB1 TRAJ28 BCAS3 ASNSD1 TGFBR2 ZNF708 RORA-AS1 C1ORF174 PEX14 IKZF3 CROCC FSIP1 HNRNPA2B1 PREX1 CDK6 SNX9 LCP2 TGFBR3 TNRC6B PPP1CA EIF4G3 C3ORF58 ECE1 PIK3CD AHNAK PCED1B DIABLO UBAC2 ELL MNT AC069368.1 ARHGAP25 GNG2 ANKRD44 TMEM192 SUN2 FYCO1 TBX21 CMIP ITGAE ARID1B PPM1L TRPS1 ARHGAP26 CANX IVNS1ABP AC068896.1 REEP5 GNA13 XPO6 QKI PRKCQ ABHD15-AS1 LINC00237 EML2 RAD51B\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: CD247 LINC01126 FOXP1 PIP4K2A RIPOR2 ACOXL RAB27A JMJD1C TRAJ28 RUNX3 RORA SUCLG2 ATG10 TESK2 ARHGAP15 CDH13 AC093827.5 PRKCH RIN3 OSBPL3 UST PLCB1 HNRNPA2B1 ANKRD11 AC069368.1 CBLB FYN ACSF3 ATXN1 USP25 SEMA4D ENO1 DLGAP1 HIVEP3 CABLES1 GLIPR2 AHR CMIP CSK CDK6 FYB1 AC068896.1 PRKCQ SPIDR BCL3 OXNAD1 CPLANE1 ZBTB20 LBH MAP3K3 TRERF1 SLC26A2 TRANK1 SNTB1 GPAT3 RB1 TBKBP1 AC020743.2 MSI2 MGAT5 AC022126.1 SUB1 ANKRD44 TRAPPC3 ARHGAP26 STIM1 CCDC186 FRMD4B PTPRJ GAL3ST3 RNF111 CDH23 SETBP1 AKNA ARID5B MBNL1 GLIPR1 SH3KBP1 RAP1GAP2 MYO18A AC002310.2 AP000424.1 HOOK2 WDSUB1 FMNL3 P2RY8 FRYL NLRC5 POLR1A PABPC1L TNRC6B ITGBL1 PVT1 CLIC5 TAGLN2 SBNO2 FBXW11 KLHL32 CCDC12 HDAC4\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 RIPOR2 PREX1 CDKN1B ANKRD44 ATXN1 FKBP5 PIP4K2A IKZF1 ELL IQSEC1 RABGAP1L AC068896.1 MKLN1 RPTOR ELMO1 ST3GAL1 CDK6 SEPT9 TSPAN14 RUNX3 ANKRD11 FAM49B ARID5B AC016831.7 SERTAD2 GATAD2A PCED1B TRAJ28 LCP2 CD247 KLF13 GNG2 SUMF1 CEMIP2 BCL2 BORCS5 PATL2 AC087500.1 TMEM241 CASP8 KLRD1 NFATC2 ITPKB ACOXL AC079313.2 CD226 ARHGEF3 NDC1 JARID2 RUNX1 ATP6V0A4 INPP4A DLGAP1 AKNA IL7R CCDC88C PRKCH NCOA2 BCL6 UBAC2 NR3C2 HIVEP3 BCL11B MBP XYLT1 RB1 DUSP22 AOAH ITGAE FOXP1 LINC01588 BTBD11 NCK2 STIM2 KIAA1551 PLEC SH2D2A AL357060.1 AL160408.2 PITPNC1 PNPLA8 TNFAIP8 ST7L HCG14 FYN ATP2B4 LINC01934 PRKCB PTPRC SPIDR HIST2H2AC MMP24OS VAV3 DERL3 P2RY8 SLC6A6 UBXN11 STK17B TGFBR3\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: UBAC2 PRKCH HIVEP2 AKAP13 PIP4K2A TNFAIP8 RUNX1 PTPRC TSPOAP1 RAPGEF1 ATXN7L1 STAG2 RIPOR2 HPCAL1 HDAC4 STIM1 IQGAP2 ST6GAL1 RARG LEF1 AC010894.3 RERE LTBP3 PIM1 SEPT9 CSGALNACT1 FAM107B TBL1XR1 PRKCB FBRS EIF2AK3 TBC1D5 DNAH2 LPP OTUD5 CCDC88C STIM2 UMAD1 GRK5 ETS1 SSBP3 NDUFV2 PRKRIP1 NEDD4L FCMR SEMA4D CRYBG1 SVIL MAML2 PREX1 RAD51B XYLT1 FOXP1 AMPD3 ITGA6 TIAM1 TPRG1 MSI2 AL359736.1 STK10 SIN3A AL136962.1 KLF7 PVT1 LINC01588 CPOX ECE1 ANKMY1 ST3GAL1 MBP RASSF3 LRRC23 FRYL HOMEZ AGTPBP1 PRRC2B PHLPP1 G3BP2 ADGRG6 PCF11 RPS6KA2 ZSWIM6 ACIN1 LINC01934 ESYT2 ZFP36L1 CEMIP2 BICDL1 MIR3681HG CKS2 GRK6 CGGBP1 RASGEF1B ZC3HAV1 CLEC16A SERINC5 FKBP5 AL356234.2 AC116366.3 ELOC\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RAD51B IKZF1 ITGAE AL359736.1 AC068896.1 ANKRD44 TNFAIP8 PVT1 LCP2 ELMO1 RORA-AS1 LINC01588 BCL11B TRERF1 CELF2 CCDC88C RPTOR AC010894.3 ATG5 LINC01126 PRKCH C15ORF53 PARP8 ACSF3 PTPRC HECW2 GATAD2A DHRS3 SETBP1 RFTN1 GLIS1 UBAC2 TBC1D14 FSIP1 STIM2 ZBTB16 ARHGAP26 HIVEP3 AFAP1 MIR3681HG GRB10 CDKN1B OXNAD1 AKAP13 FNDC3B ETS1 PITPNC1 TBC1D5 RAPGEF1 TAF1 ZFP36L1 RUNX1 MICAL2 PNKP FOXP1 PSTPIP1 GNG2 LINC00598 RBPJ BCL2 MSI2 CD247 SPIDR PTK2B RASSF5 INTS9 SORL1 ESR2 CHST11 MRGBP AL390957.1 HNRNPA2B1 ITPR1 CD226 NFATC2 PPP2R5C NR4A2 SRPK2 ZEB2 CNOT6L HCG17 RCOR1 MIR3142HG DNM2 PNKD STAT4 RORA RIPOR2 UPP1 CBLB PPM1B RALGDS MGAT5 OARD1 PREX1 CAMTA1 BCL2L1 TRABD2A SEMA4D FOXN2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH ARHGAP26 AKAP13 AHR KIAA0232 KAT6B IQSEC1 VMP1 RASSF3 RUNX2 PTK2B ARHGAP25 CDC42SE2 SYTL2 LINC00598 AL591885.1 RNF165 DNASE1 MAMSTR PKM ZNF331 AC008105.3 ATXN1 AC117394.2 TIGIT SAMD3 EPC1 ST3GAL1 MKLN1 SEMA4D TBC1D5 FNBP1 AC010894.3 BCAR3 RASA2 CRY2 SEPT9 MAP3K3 LMBR1L MXD4 THUMPD3-AS1 SMAD3 VDR EBNA1BP2 FOXN3 BCL9L GSE1 PLCL2 RGS12 TMEM120A CPEB2-DT AC093627.5 NELL2 MSL2 MKNK2 POC1B LINC01934 RARA CD226 TNFSF8 CHST11 SMIM3 MAML2 ARHGAP19-SLIT1 RUNX1 ATG5 INSIG2 HIVEP2 UBXN11 UST TNK2 SNRNP40 CCNT2-AS1 SELENOI ISY1-RAB43 SAP130 PWWP2A FLYWCH2 ARRDC1 AC087645.2 HERC6 RABGGTA BCL2 PACS1 ECHDC2 ABL1 SNX9 AC009226.1 GRAMD4 SMIM9 TRMT10A MTIF3 DNM2 C21ORF91 ARF6 PCGF5 TALDO1 PRF1 AC069368.1 ANKRD23\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MBNL1 AC068896.1 FNDC3B FOXP1 TGFBR2 ATP6AP1L GRAP2 BCL2 CMIP DOCK10 AL355512.1 TBC1D2B RUVBL1 AC006369.1 PIP4K2A MYO1F HECW2 ADCY7 FNBP1 JMJD1C MED12L TRAF1 MCTP2 BRD7 GSE1 CELF2 SLC25A26 GLG1 USP34 CD226 PLCG2 AL136985.3 FAS PDCD1LG2 CBX7 PCGF5 AC022558.2 PUM3 KLF6 TRAT1 SIN3A TMEM38B ISG20 AGBL3 TNFRSF1B SLC6A6 GTF3C3 ADPGK AZI2 PANK4 RAC2 ME2 OSBPL3 FRMD4A TNFAIP8 TET3 RIPOR1 TOR1A ZMYM2 NFATC2 RUBCN ORC2 ISPD ZNF397 SMAD7 FAM102A NFE2L3 INPP5K AC076966.1 WASHC3 ANKRD28 UTRN PHYH ZBTB38 ZNRF1 TRIM14 RALGPS1 SIDT1 PTP4A2 TCTN3 GCNT1 TBC1D1 LUZP1 NBAS CYSRT1 GPR107 ALCAM MYH15 OXNAD1 SFMBT2 PDCD10 AL392023.2 TUT7 ZNF438 LINC01358 LRRC47 UTP4 GRK5 SART3 F8\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: C21ORF58 FARSA TCP1 STAP2 SNX6 PIM1 DACT3 AC034231.1 CNOT3 CASP9 MIDN ZNF558 AAK1 ANKRD27 DCLRE1A SLC11A1 HNRNPA0 SRF HIF1A-AS1 FLI1 CLN8 DYRK3 SNX8 KIF22 BCAR3 RPS3A CCDC9 PHF23 FKBP15 PXYLP1 ERN1 AC001226.2 ZNF575 CACNA1C ATXN1L TOMM70 APBA3 BCL3 MAP2K2 GRPEL2-AS1 LCORL NUDT16L1 DOCK6 VPS26A AC005523.1 IFT81 FBXO31 TADA1 AC008440.1 ARL4C AC107214.1 ARPC5L EXOSC1 CYSRT1 LPXN TGFB1 AC025682.1 IFT57 MARK2 UBALD2 MCRIP2 MTMR4 IGSF9B AC010271.1 VMA21 BOLA3 HSP90AA1 NOL4L PRKRA RGS9 UHRF1BP1 HSPH1 SF3B6 GRIN2C TUBB4B TIMM22 RAD52 ATXN7L3 BCORL1 RHOG TC2N PXN-AS1 RRAS ZNF599 NFIC MRPL24 NIT2 CCDC12 SMARCA4 NR4A1 AC020911.2 TAF6L SIK2 ZNF70 KIAA0232 STK32C PABPC1 MYO19 ERGIC1 ZNF7\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH AC016831.7 RAPGEF1 ARHGAP26 FYN RORA-AS1 FYB1 IKZF1 RAD51B PIP4K2A CD226 AL390957.1 PLXNC1 NCK2 PTPRC CD96 FOXP1 HIVEP3 UBAC2 TG UBP1 FAM117A AC068896.1 ANKRD44 MTSS1 SLFN12L MCTP2 MBNL1 SYNE1 LINC01588 CCDC88C TNFAIP8 PPP1R16B KLRD1 UMAD1 ICA1 PDCD10 LYST CDK6 NCOR2 TNRC6B NEK7 RIPOR2 UBASH3B BCL11B SCML4 CELF2 GNG2 UBA3 NSD3 STAT4 ARHGAP15 JAML GASAL1 SLC38A1 TRAJ28 SYNJ2 PARP8 PRKCQ TMSB4X VMP1 LIPA NCOA2 WNT5B HDAC4 MAPK1 RIN3 CPOX CCNG2 LINC01934 TCF7 STT3B FBXW7 ARMH4 CDKN1B RASSF3 AHNAK POC1B UBE2D3 EXOC4 PATL2 ST8SIA4 AC007384.1 ETS1 ARHGEF1 ANKRD11 KLF13 MYH9 RUNX3 NFATC2 UPP1 S1PR1 CYTIP TGFBR3 AKNA RNF4 CHST11 PIK3R1 RFTN1 GPBP1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: KLRD1 BCL11B ARSG LINC01588 ANKRD44 RUNX1 ABLIM1 SAMD3 LINC00426 CASP8 AHCYL2 IKZF1 GCH1 ATXN1 TMEM173 ANKMY1 SYTL2 RASGRF2 APBB1IP CDC14A PHF19 PRKCB TMEM216 RAB27A ARHGAP26 GNG2 LEF1 ZBTB20 ME2 AL034549.1 CAMTA1 MAPK1 PNKP MIAT CACNA2D2 DGUOK-AS1 FBXL17 ANKRD46 BTN2A1 NEMP1 HNRNPUL1 LDLRAP1 TMEM256-PLSCR3 CHKA PSMA5 SH3BP5 PDXDC1 YIF1A PPIL3 AC005523.1 UBASH3B AC109826.1 MBOAT7 SSBP2 MKNK2 MBNL2 NKIRAS1 SPNS1 UBXN11 LPP CCR3 KLF13 RPTOR MCFD2 AC011603.2 ZNF681 SASH3 FOXP1 AL355916.3 PLEC CHST12 PTK2B P4HTM LINC01934 FBXL19 ARHGAP15 CATSPERG RMI2 SOAT1 ZRANB3 SRSF5 LTBP2 PRKRIP1 C1ORF112 ATG5 IL5RA CLYBL TCEANC C1ORF141 NCALD ZNF609 BORCS5 DUSP10 FAM85B RAP2A PTPN22 FAM177A1 SLC6A6 LINC01132 AC243829.1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 KDM2A IKZF1 AC068896.1 ARID5B AC016831.7 ATXN1 CBL PTAR1 PCED1B ZBTB20 AKNA SSBP3 STIM2 RIN3 RASSF3 TMEM254-AS1 RNF7 PFKFB3 RPS19 SFPQ INTS4 CELF2 ARHGAP25 MYH9 SH2D3C CAST UMAD1 TTI2 RUNX1 PIK3R1 JARID2 CEMIP2 YWHAG JAZF1 PLEKHG1 FAM107B SETBP1 IL16 MDFIC CD58 TSEN2 ASH1L RFX3 FYN CLEC2B ZNF628 EPS15 SESN1 AL390957.1 ELOVL6 GSTO1 HDGF TBC1D2B LIPA CDC73 CCDC88C E2F6 AL162377.3 AC079313.2 CAMK1D ZBTB22 PRKCH CNIH1 LYPD3 NAA50 FAM98A SUPT3H RPS6KA2 VPS4B CHURC1-FNTB GNPNAT1 PTPRC SLC16A7 CPNE8 AC025283.3 AC008124.1 TMEM14B AL691442.1 HECTD1 BCOR ZNF639 FASTKD1 FCMR TRIM44 PRKRA NFATC2 MGAT5 RBM17 CRTAM PAG1 TRERF1 RAD9A MCM9 RAPGEF1 GFOD1 SGMS1 EPHA4 TRA2B ATAD1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 RUNX1 ST3GAL1 AKAP13 ANKRD44 ATG5 HMGB1 FOXP1 ARID5B SPIDR DUS2 SEPT9 PPP2R5C CD247 LINC01588 IQGAP2 PIK3R1 ZNF365 STK17B AK2 PRKCH CDH13 LEPROTL1 TRERF1 HIVEP3 ZBTB16 GDPGP1 RPN1 RASSF5 LINC02384 TBC1D5 RAP1A QKI CCDC12 RORA C12ORF75 AC068896.1 AC016831.7 IQSEC1 SMG6 RAD51B ATXN7L1 ABLIM2 SNTB1 CD47 SNAP47 RNF4 UTRN CDC14A PIP4K2A AC010894.3 CELF2 LGR6 FYB1 NCK2 RIPOR1 AKNA FSIP1 SETBP1 SLC12A6 CCND3 ZNF831 MYH9 KLF13 PTPRC CTIF OXNAD1 CYTIP AC020911.2 ATG16L2 KAT2B ARSG CADM1 LINC01126 GADD45A TPRG1 FAM49B TMEM116 GNB2 RIN3 NPAT CABIN1 SP4 PMEPA1 LPCAT1 RPTOR NEMP1 SPAG1 RAP1GAP2 MED12L LIPA SLC25A26 DOCK10 SYNJ2 DGKZ RORA-AS1 ATP6V1E2 TGFBR3 NR4A1 ZEB2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: LCP2 RPS6KA2 RUNX1 GRK6 SEMA4D AL390957.1 PRKCQ ARHGAP26 LINC01588 TRAF1 PIP4K2A BCL2 CST7 IKZF3 PRKCH RARA SEC31A AOAH ZFP36L1 TNRC6B AKAP13 TBC1D2B ELMSAN1 ARHGEF1 ITPKB NCK2 GNG2 FAM49B CBLB H3F3B NLRC5 TOP1 CIC IGF2R AP000787.1 PATL2 CFLAR PACSIN2 CCDC69 AP000311.1 HIVEP2 FOXN3 LRRFIP1 SARDH MCUB SH3BP5 PLCB1 SEPT9 TBC1D5 PPP2R2D GMFG CAMK2D TRANK1 CDK13 ZCCHC2 IL10RA TSPOAP1 RASSF5 B4GALT1 GRK5 ANO10 MAML3 DCTN4 AP000820.1 STIM2 PLEKHA4 AHNAK CAPN2 AP005329.2 DLGAP1 LINC01135 UBAC2 ANKRD44 RNF44 TOMM40L CCND3 LINC01655 ETS1 RPTOR POU2F2 AC027779.1 ABCB9 CDK19 LFNG GAS5-AS1 CXCR4 BHLHE40-AS1 ARHGAP25 AC068896.1 DOCK9 KLF9 CCDC88C NOSIP PAG1 ELMO1 TG SPIDR OSBPL3 MBP DRAIC\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 ETS1 ARHGEF3 PTK2B FOXP1 PRKCH RHOF AKNA STK10 ARHGAP25 NFATC2 ATG5 AL390957.1 AC010894.3 LINC00598 AC068896.1 LINC00649 ARHGAP26 AUTS2 SCML4 CCDC88C RPTOR NEAT1 SETBP1 KLF13 FLI1 IQSEC1 LRCH1 HIVEP3 RIPOR2 CCND3 MYH9 CHST11 PATL2 IKZF1 AKAP13 SPIDR CELF2 SLC2A1 TMEM116 TGFBR3 GSE1 LPP AL359736.1 GFOD1 TTC39C RAD51B TRERF1 OSBPL3 HIVEP2 RHOBTB3 S1PR1 PRKAG2 LINC01588 RAB27A AC107375.1 CBLB VMP1 LEPROTL1 EPHA4 ARHGAP10 PIP4K2A BCL2 CDC42SE2 SMPD3 CAMK1D LMTK3 FNIP2 PRR5L FYN DNMT3A HIST1H1B USP39 RALGDS ARHGEF1 FGD3 DYRK1A KRI1 AL356215.1 FAM167B AC006369.1 PNPLA8 MIA3 PAG1 ZMIZ1 PIK3R1 SUPT3H PIGV ZFP36L1 PLEK AL160408.2 SNTB1 BACH2 SLC25A26 IKZF3 CDK6 AC022075.1 MNT PRRC2B PPP3CA\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RPS6KA2 PRKCH SEPT9 AC016831.7 ANKRD44 MAML2 AC068896.1 ARHGAP26 WWOX TGFBR3 PTK2B ZYX ANKH BICDL1 IKZF1 RAD51B RUNX1 GAS7 PIP4K2A EFNA5 LZTFL1 EPM2AIP1 SIGIRR NR3C1 ERBB3 LPP FYCO1 KLF13 STK17B KALRN OSBPL3 SOD2 AC009126.1 ZNF652 PTPN2 TMEM150B KSR1 ARHGEF3 AC093010.2 SYNJ2 BCL2 WDR1 LINC01980 FNDC3B HIVEP2 AC078923.1 LINC01588 ATXN1 MACF1 CFL1 MAN2A1 RASSF5 NFATC2 TRG-AS1 NT5DC3 CCDC69 ZFC3H1 FAM117A AL160408.2 UTRN RIPOR2 MBP AC079313.2 LCP2 MYO19 NOL4L LRIG1 TXNRD3NB AC008764.1 CDH23 RAC2 ZNF77 PITPNC1 ZBTB16 LYSMD3 PDE4D TSPYL2 DOCK10 ARMH4 NLRC5 MPRIP IQGAP1 GALNT10 PATL2 STT3B HSPA13 ABHD15-AS1 VPS13D LRBA CFAP97 AC110275.1 FAM129A THADA CCDC88C ITK ITPR2 ADA CDC14A ERCC1 CHD1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP25 ARHGAP26 FYN PREX1 ZEB2 AC016831.7 MBP KLF13 RIN3 BICRAL RHOH C1ORF112 LPP PPP2R5C CCND3 SPIDR CD247 IL32 AC068896.1 TNFAIP8 CYTH1 PRKCE RUNX1 ETS1 IQGAP2 PRKCH CACNA2D4 CNOT6L UMAD1 ACOX3 RPTOR MXI1 IKZF1 FOXN3 ZFP36L1 CCDC88C TBC1D5 ZBTB16 LPCAT1 STIM2 RB1 TRABD2A ARID1B NFIA MTMR12 TGFBR2 RUNX3 CDV3 AL136295.1 DNM2 ITPR1 DRAIC PDE4D MVB12B ARRDC3 EHD1 MCTP2 SMAD3 PITPNC1 SORL1 RORA AC079612.2 IQSEC1 MBNL1 STK10 AL359736.1 MAML2 PLXNA4 STK17A RGS3 AP000311.1 ERAP1 LPIN1 LIPA SNAP25-AS1 TUBA1C MAPRE2 ZNF609 ENKUR TTC33 AC022182.1 CAMK2D DGKD SEMA4D NF1 ZNF831 PATL2 M6PR AC005332.5 CHD1 CXCR4 EEF1E1-BLOC1S5 VIM-AS1 AC069368.1 GMNN TBC1D2B FAM49B AL035530.2 UBAC2 NCOA2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: PRKCH SEMA4D UBAC2 ARHGAP26 RUNX1 ITGAE RPTOR ANKRD44 TRAJ28 AKAP13 ATXN1 CELF2 HDAC4 FAM129A EHD4 IFNG-AS1 MBP SNTB1 CDH23 RAPGEF1 FOXN3 HIVEP2 RIN3 SESN1 FYB1 ELL CAMK2D ELMO1 LINC02273 FYCO1 LINC01135 MACF1 MIAT MCCC2 TGFBR3 JARID2 TTC39C WWOX FSIP1 UBASH3A LDLRAD4 PRKAR1B CDK6 SH3KBP1 SMG6 AL359736.1 CD96 ST3GAL1 GAS7 STK24 TMEM135 SIRT5 AC008014.1 NEK7 GNG2 LBH AC087500.1 PRR5 EYA3 RB1 IFIH1 USP12 SPEF2 ETS1 TSPEAR SLC25A26 DERL3 AL356234.2 REC8 MBNL1 ITPKB AL031727.2 RHOF SYNE1 SEPT9 LCP2 AC025682.1 DIS3L2 AL357060.1 AC022126.1 ANXA11 CCNT1 ARHGEF3 TCF7 EPHA4 PMEPA1 EML6 ZFP36L1 KANSL1 NOL4L ELMSAN1 TDP2 SLC2A1 AL591885.1 OXNAD1 LINC01004 SH2B3 DUSP10 CDV3 ELF1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: IKZF1 UBAC2 SEPT9 ELL ARHGAP26 ATXN1 SLC2A1 CELF2 CXCR4 ARID5B ATG5 CD247 CPOX AC016831.7 AKAP13 ANKRD44 RUNX1 SYNE1 CYTH3 PVT1 PRKCH PLEC HIF1A-AS1 GGA1 CBLB INO80B SCML4 KLF9 GPR107 NCOA7 FYB1 PATL2 STIM2 RGS3 IQGAP2 NLRC5 CDK6 CCDC88C ATP10A DRAIC VOPP1 PIP4K2A RORA SRPK2 SLX4IP RPS6KA2 SUPT3H HDLBP TBC1D5 AP000787.1 ANKRD11 PTPRC PRKCB CHST11 GCH1 LRRC41 XPO6 NUP43 NAV2 PAQR8 AL355512.1 CDC14A ETS1 ST8SIA4 STAM CARD11 HOPX PHF20 LDLR AC011481.2 PPP2R5A RBP5 AL928654.3 BCL2 SNX9 MRPS30-DT CRYBG1 STAM2 KLC1 WDR1 AC010542.3 KCNC3 MCCC2 PLAC8 CABLES1 CDH23 PI4KB STK40 IGF1R CDC42SE2 HOMEZ LINC01588 MBNL1 AP000311.1 RIN3 PLAGL1 RASSF5 KLF13 AC243829.4 CHD1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ANKRD44 RUNX1 FOXP1 HIVEP3 PRKCH RIN3 AL359736.1 ARHGAP26 RORA-AS1 NOSIP PTPRJ TM2D3 SEPT9 LIPA PTPN6 CROCC LFNG ITPR1 SCML4 ATP2B4 TMEM163 ZC3HAV1 AL121748.1 AC069368.1 ELMO1 AC022126.1 ZBTB4 TGFBR3 LINC01588 ELL PBX4 RAB11FIP4 LMNA PLCL2 P2RY8 FYCO1 HNRNPUL1 HECW2 CD226 ERCC1 MCTP2 FOXN3 ZNF365 TNFAIP8 LPIN1 SNTB1 FAM117A CD6 ATXN1 AC005775.1 ZNF217 TRERF1 DRAIC MCF2L2 SESN1 MNAT1 ZMIZ1-AS1 DLEU2 FLI1 TRAJ28 PJA2 USP34 MYBL1 ELK3 TSTD2 ZFP36L1 IKZF3 ARHGAP15 KAT2B MIDN ANKRD10 PATL2 FAM177A1 LRRFIP1 EIPR1 ACTB SYNE1 BICDL1 CHST11 ACOXL AC048341.1 EML2 LRRC8C-DT ATG5 FOXO1 C21ORF91-OT1 WDR1 PREX1 CD247 PIK3R1 HELB MTMR4 TMED5 SMAD3 CUX1 ZDHHC14 KBTBD2 NFIA RUNX3 AC068896.1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 MBP UBAC2 RUNX1 PRKCH FOXP1 CD247 CCDC88C RAPGEF1 FYN ANKRD44 HIVEP3 AC016831.7 SEMA4D MGAT5 ETS1 CAMK2D AC068896.1 LINC01588 CCND3 CDC14A ARHGEF3 ARHGAP25 TSPOAP1 AP000311.1 CHST11 KLF13 GRK5 TNFAIP8 RPTOR STAT4 PTK2B TSPAN14 KLF12 CELF2 ATXN1 RBMS1 ERCC1 IKZF1 PRKCQ PPP2R5C STK10 CDC42SE2 KIF21B FYB1 NFATC2 PDE4D HNRNPUL1 LIPA AL359736.1 MBNL1 AC025946.1 CDK6 LPIN2 PLCD1 ZBTB16 AC008764.1 CBLB STIM1 SNTB1 RERE LINC00598 BCL11B LMNA CD2 PVT1 ZNF217 GSE1 ATXN7L1 ITPKB UMAD1 MPRIP FLNA FAM107B STK17B H3F3B LCP1 RIPOR2 ZNF365 OSBPL3 PMAIP1 CD96 AC010894.3 PSTPIP1 AC009126.1 ARHGAP15 RUNX3 ASB2 AC021752.1 STIM2 CST7 ACOXL NCK2 ASAP1 CYTIP ARHGEF1 DOCK9 SRPK2 ARID1A PTPRC\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AC068896.1 RUNX1 CCDC88C FOXP1 BCL11B CYTIP PPP1R16B GRK5 CELF2 ARHGAP26 PRKCH HIVEP3 LINC01126 UBAC2 AC010894.3 NCK2 ARHGAP25 ARHGEF1 RASSF3 TGFBR3 AC016831.7 DNM2 SORL1 LINC01934 TNFAIP8 TTC33 DRAIC IQSEC1 NFATC2 SEPT9 RORA APBB1IP MAML2 GPR68 RGS3 CGGBP1 ELMO1 AUTS2 DOCK10 ETS1 PTPRJ ZNF407 LBH AKT3 ATXN1 HMBOX1 TRABD2A CD96 ST3GAL1 BHLHE40-AS1 BCL2 TECR STAT4 TRAJ28 FAM102B RIPOR2 ITGAE FOXN3 BORCS5 HOOK2 PTPRC LEPROTL1 STK39 PIP4K2A ARHGEF6 TBC1D2B TBC1D1 SLA2 PRKCB IL21R UTRN KLHDC4 ZFYVE28 AC022182.1 MBNL1 RHOF SNX9 CEP85L HBS1L TFB1M RFFL RUNX3 TGFBR2 RAD51B LINC00426 ITK IKZF3 MBP FAM85B CXCR4 SEMA4D PPP2R5C OXNAD1 UBASH3B PDIA4 AC008764.1 CRYBG1 KLF13 FYB1 MACF1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AC068896.1 RUNX1 AKAP13 IKZF1 AUTS2 UTRN ARHGEF3 PRKCH ARHGAP26 ELMO1 LRIG1 CBLB PPP2R5C AHR AL390957.1 FYN STK10 EPHA4 UBE2D3 SEMA4D GNG2 SLC2A1 MIAT ANKRD44 TBC1D5 STIM1 TTC39B PIK3R1 TECR EPB41L5 PREX1 ATG5 RARG NBAS LINC01126 AL139807.1 LAPTM5 LRFN2 CARS2 ST8SIA4 MNT EIF1 IFFO2 CST7 G3BP2 CFLAR EHD1 INPP4A NFATC2 SMG6 ATP6V1E2 CELF2 SIK3 CHST11 SNTB1 HNRNPUL1 AC025159.1 DUSP10 PTPRJ LINC01588 NR4A2 CDK6 CPOX NCOR2 KLF13 HOOK2 TOGARAM2 RASA3 ENC1 DLEU2 ARAP1 AC009185.1 TBC1D2B RASGEF1B FBXW7 MAML2 MATN1 CMIP PTCH1 PIP4K2A POU2F1 RASSF3 ITPR1 SUSD6 MTSS1 ST3GAL1 ARHGAP15 PTK2B LHPP HIVEP3 WDR73 TMEM131L BCL2 PRKAG2 MSI2 PRKCQ ARID5B RB1 CYTH1 CCDC88C\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: IKZF1 AC078923.1 FYN HIVEP2 ARHGAP26 ITGAE STAT4 RIPOR2 AL390957.1 SERTAD2 CELF2 UTRN MBNL1 PREX1 UBAC2 ASAP1 AL357060.1 CCDC88C ETS1 FKBP5 SCML4 MBP ZNF131 TSPAN14 RAPGEF1 KIF22 ANKRD44 ZNF831 LINC01588 RBMS1 POLM MAMSTR PIP4K2A MYO1F FYB1 LPP BACH2 JMJD1C FNDC3B FAM49B CCDC12 CAMK2G AHNAK C10ORF143 AC005726.1 FOXP1 KIF21A RPTOR LCP2 DPYD MCF2L2 PTPN6 APBB1IP PLXNC1 PPP2R5C IQSEC1 ZBTB16 STIM2 APBA2 MCCC2 ACTN4 BRWD3 ARID1B SVIL AL162377.3 RASA3 LY9 ELMO1 NAA38 DOCK8 FSIP1 GAS7 SF3B5 TUT4 AKAP13 GMNN ITPRIP TBC1D14 RHOH AUTS2 LRCH1 KIFC1 ARL4C ZBTB2 C6ORF106 JAK1 CHST11 CD226 MYH9 DGKQ PRKCH POC1B CIC NMRAL1 TMEM189-UBE2V1 HNRNPUL1 LINC01307 ARAP2 RUNX3 TNK2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: AL390957.1 ANKRD44 AC068896.1 SEC22C HNRNPC PXYLP1 TTC39C RB1 SMAD3 ZBTB16 RASSF1 STAT4 RAPGEF1 CHD7 RIPOR2 ARHGAP26 FOXO3 PITPNC1 RALGDS PIP4K2A FOXN3 NUCB2 NPM1 AC137810.1 AC006369.1 ST3GAL1 NR3C1 STAT1 PIK3AP1 ITGAE PAIP2B GNG2 ETS1 DUS2 MBP PXN ARID1B CDKN3 ATG5 CEP85L IKZF3 RANGAP1 TSPOAP1 CHST11 CCDC88C GASAL1 MPP7 ZEB2 B4GALT5 AC007513.1 ITGA6 CYTIP RHOF RAD51B SYNE1 RNF38 ACYP2 GALNT11 DNM3 IKZF1 LINC01655 FOXN2 HIVEP3 AGPAT4 MAML2 AC016831.7 AC093010.2 FAM102B TMEM241 UBE2D3 VMP1 PTK2B INPP4B RBMS1 SH3KBP1 NEK7 PDE4D UTRN ZFYVE28 KLF12 ERN1 HDAC4 ACLY ADAM19 AC048341.1 BIRC2 NEDD9 SLC3A2 MBNL2 CD8A TBC1D1 GSK3A NIPA2 AC022126.1 LINC00426 BRICD5 PAXIP1 TPM4 NUMA1 CD226\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 HIVEP2 ATG5 TNFAIP8 PTPRC ARHGAP26 PRKCH PRKCB ATXN1 PREX1 RIPOR2 IQSEC1 KIF22 MBNL1 MYH9 ACOXL ARID5B TRAJ28 FOXN3 CDC42SE2 AL359736.1 LINC01588 UMAD1 RAPGEF6 UTRN FAM117A RORA-AS1 AC068896.1 CCDC88C PTK2B DDB2 KLF13 SEMA4D GFOD1 SOD2 ZFYVE28 INO80B ARHGAP15 RASSF5 CAMK2D RASGEF1B FAM129A ETS1 ITPR1 GLS PRKRIP1 LCP2 IKZF1 TXNDC9 MYO18A AL035530.2 AKNA TBC1D5 CELF2 STIM1 MGAT4A DLG5 ARHGEF3 TGFBR2 CDC14A CHST11 STT3B CMTM7 CCDC12 C21ORF91-OT1 BCL9L RAD51B PRRC2B PATL2 RIN3 DNMT3A SLC1A2 GNG2 ACTN4 FKBP5 ARNTL DOCK10 EEPD1 SMARCA2 SPTBN1 TNIP1 TIPARP DNM3 AL023755.1 LSP1 TBC1D14 AKAP13 PIGV CCND3 TGFBR3 HIVEP3 LIPA NBN SH3BP5 ERCC1 ZBTB16 AC013270.1 RARA TRERF1 RUNX3\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MED12L UMAD1 ST8SIA4 FAM129A ELMO1 FAM102B BICRAL BBIP1 IQGAP2 TSC22D1 KLF9 RUNX1 ABTB2 LCP2 NF1 FYB1 MCM5 PPM1B ARHGAP25 MRPS27 CDK17 E2F2 CEP85L AKNA GRAMD1C CCDC102A ABLIM2 GATAD2A LINC01840 ZBTB7A CELSR1 ALOX5AP PCAT1 SEMA4D ISPD HNRNPUL2-BSCL2 ARHGAP26 PKM Z83839.2 MMD LYST CARS2 RNF213 PLEKHF1 ZFP36L1 CLYBL PRKCH PPP1R42 PAG1 EIF3H NCK2 LIPE-AS1 CDC14A MAGI3 PLCB1 RORA-AS1 PTPRJ AC007285.1 AL133523.1 CEP120 RARA AC005899.8 GAB3 VMP1 SOD2 CST7 RIN3 DNMT1 AC012184.1 AC097534.2 ITPKB CASP9 FOXO1 LINC02320 GRAP2 GRK6 LINC01588 ZCWPW1 AC092647.5 NR3C1 MAPRE1 MCM9 ERI1 BCL9 SGMS1 RANBP9 RPS6KA3 PRKCQ AC087164.1 AC078980.1 PAOX BTF3 FGR ASIC2 CMIP ASAP1 HK1 CD5 AL357060.1 AC010754.1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: UBAC2 TSPOAP1 PRKCH DNAH2 IL7R ARHGAP26 CCDC88C CDH23 RUNX1 PPP2R5C MAML2 RAPGEF1 RALGDS SLC38A1 ITPKB DNM2 RIPOR2 MNT CD247 MSI2 RHOF ERN1 BCL9L TNRC6B LINC01934 PLXNC1 CELF2 PIK3R1 LINC01135 RUNX3 ASAP1 ITGAE GRK5 RAD51B FOXP1 TRAJ28 KLF13 CIC LIPA IQSEC1 HDAC4 AHR ZBTB16 CFLAR BCL11B MACF1 PITPNC1 RFFL AKAP13 STK17B BCLAF1 TC2N SLC2A1 HNRNPUL1 SESN1 CCND3 RASSF5 SEPT9 FAM129A TOGARAM2 AL031599.1 IL2RB MYBL1 SPTBN1 CDKN1B BCR GRAP2 EHD4 AL512791.2 AC078923.1 ACTB FYB1 LDLRAD4 ITPR2 PHF19 TECR CDC42SE2 UGP2 SPEF2 AC016831.7 JAK1 TBC1D5 TTC39C NFATC2 NDUFV2 PTK2B SH2B3 EVL ATF7IP USP1 IKZF3 CMIP MYH9 AUTS2 RALGPS1 ARHGEF3 SCML4 RORA LINC00598 LINC02384\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: KIFC1 SIN3A AC104472.3 GRK5 AP3D1 THUMPD3-AS1 CPT1A NR4A1 SRPRA GPBP1L1 RALGDS ZFP41 MTMR4 FLNA AL450998.2 HOOK2 ZNF837 GATAD2A ATP13A1 HNRNPK POU2F2 MPRIP TIPIN MACF1 DRAP1 PATL2 SLAIN2 SSSCA1 MIB2 HNRNPA2B1 NPHP3-ACAD11 HNRNPL ADAMTSL4 TBCA AP000311.1 SP3 ILF3 C19ORF67 ZBTB7A AC025682.1 CSNK1G2 ZNF367 PLAUR FNBP1 SH3GL1 HMGB1 AC002401.1 MNT STK24 EPM2AIP1 SEC31A ZNF335 CHKA PIM1 SF1 ELK4 HNRNPUL2-BSCL2 LAPTM5 PNKD AF038458.3 HOMEZ RPL22 IFNL1 NAPA DENND4B SPON2 EEF1G B3GAT3 TMEM64 METTL21A SPAG4 TTC23 DOHH IL1RAP BFSP1 TCERG1 MOB3A CARD19 LMF1 ACTB ARID5B ZEB2 PIDD1 RIN3 HIVEP2 DAB1 ZNF324 S100A10 RRAS RASGEF1B DNAJB6 SLC2A8 RASGRP2 DNM1L IKZF3 CAMK1D CARS2 ARHGAP4 RERE VASP\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: IER5 RUNX1 PRKCH PIP4K2A ETS1 ITPKB TBC1D5 ATP2B4 NCK2 AC068896.1 HIVEP2 FAM107B CELF2 CYTH1 IKZF1 RASSF5 ACOXL RAPGEF1 PHF19 UBAC2 ANKRD44 RHOF SMAD7 MNT NR4A1 NFATC2 ELL SKI RUNX2 RARG PREX1 LMNA RBL2 TTC33 EPC1 FOXO3 JARID2 ZC3H10 ANKMY1 RMC1 BICDL1 HIVEP3 CHST11 HNRNPUL2-BSCL2 RGS12 RORA-AS1 CDK17 SREBF2 CD69 NDUFV2 GATA3 PPP1CA FYN TSPAN14 ZBTB16 RPS6KA2 AC025159.1 KMT5A ZFP36 UTRN NFKBID TRAJ28 FAM78A AKNA PTMA AL691403.1 SLC11A1 DGKD NOP58 AC079313.2 PPP1R16B DRAIC SH2D3A PRF1 ELMSAN1 SH2B3 IMMP2L KLF9 UMAD1 ST3GAL1 PPP2R5C NR4A2 AL160408.2 MPZL1 PPP2R5A PIM3 SYNCRIP NFE2L3 CD55 ADAMTSL4 KAT6B LINC00910 FUS EHD1 GSK3B MSI2 PTCH1 JADE2 RARA BICRAL\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MSI2 ST3GAL1 MAML2 FOXP1 NIN ARHGAP26 PRKCH ETS1 PATL2 TMEM106B XPO6 SCML4 CCDC88C ITK TNFAIP8 TRANK1 TIAM1 STK10 NBN FAM20B GRK5 BCL11B ARHGEF3 DNM2 ARHGAP15 HECA ARID5B AP000311.1 ST6GAL1 SNAP47 ABR JARID2 TSPOAP1 TGOLN2 LARS AP000787.1 EVL KHNYN KBTBD2 G3BP2 AC013270.1 ZBTB45 C1ORF112 UBAC2 STIM2 FIZ1 PITPNC1 KLF9 AC068896.1 AL392172.1 HDAC4 XXYLT1 MCM9 KLF13 CYB5B MZF1-AS1 NUCKS1 FLNA TPRG1 ADGRE5 ZFYVE28 UMAD1 FOXN3 ARSG ACOXL MDS2 RASSF3 C15ORF53 NQO2 PYM1 PTK2B FOXO1 HINT1 CELF2 CDKL5 MYB STRN3 ZNF143 CAMK2D PNKD TBCCD1 REV3L ARRB1 MAP3K3 PECAM1 ZNF790 TCF20 BBX SKI PELI2 SPPL3 TAGLN2 ERCC1 LY6E-DT RUNX3 PRKACB TMED5 DNMT3A NCK2 PAG1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 PIP4K2A SEC22C RORA-AS1 KLF12 ITGAE IQGAP2 TGFBR3 IKZF1 ZNF831 SEPT9 MSI2 ATG5 PIK3R1 KLF13 RAB27B LINC02384 PTPN4 PPP1R16B ASAP1 PPP2R5E CD247 AKAP13 ICAM2 FYN PPP3CA ST3GAL1 TNFAIP8 INPP5D BCL11B CD2 GAS7 SPIDR TNIK KLRD1 GRK5 PRKCH ARHGAP26 PATL2 MBP IKZF3 VAV3 FOXP1 CBLB SESN1 PPM1B PPP2R5C AOAH MYO1D AC068896.1 RAD51B ZBTB16 PRKCQ FAM107B LPP PDE4D APBA2 TG RPTOR TPRG1 UTRN CEMIP2 AL035696.3 TBC1D2B RAPGEF6 UBE2D3 AMPH PTCH1 TRERF1 ZEB2 ETS1 SLCO3A1 RIN3 TIAM2 MDM2 RHOH PHACTR2 ARID1B BCL2 LINC01358 CARS2 PCAT1 DRAIC TGFBR2 CUBN THEMIS AL136962.1 ZFP36L1 ZNF365 PBXIP1 RERE ETV5 NFATC2 WNK1 ACOX3 CCDC88C TADA1 RSU1 LINC01841 VMP1\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: ARHGAP26 ANKRD44 RUNX1 ST3GAL1 RABGAP1L CELF2 HDAC4 RIPOR2 CD247 ATXN1 HIVEP2 CDH23 GNG2 MGAT5 PIP4K2A RAD51B ACOXL PATL2 RASA3 JAML FYN ZBTB16 DAPK2 MGAT4A PRKCH SEMA4D BCL2 LINC01004 ATP8A2 RAP1A AL390957.1 PRKCA SPON2 CRADD NCOA2 AC008764.1 FYB1 SH3KBP1 HNRNPUL2-BSCL2 NUB1 WWOX GTDC1 NEAT1 ZNF831 BICRAL FAM129A ARHGEF3 CMTM7 AL359736.1 LPIN2 SCML4 VPS13D MYO1F IL7R UBAC2 LPP CASP8 RORA-AS1 TGFBR2 SEPT9 PDE4D SPTBN1 AC022075.1 SNX9 GRK2 CHST11 OSBPL3 HIVEP3 UMAD1 AC016831.7 TPRG1 RBMS1 STAG2 KLF13 STAT4 PLCB1 RNF125 FLI1 P2RY8 AL162377.3 DLEU2 ZFP36L1 HBP1 ARMH4 UXS1 LINC01358 HLA-DMA TOX2 KIF22 RB1 CD96 ABTB2 CPOX FSIP1 LINC01126 MDC1 SLC2A1 AL157373.2 DUS2 RFFL\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: RUNX1 UBAC2 PRKCH AKAP13 ARHGAP26 PTK2B AKNA SEPT9 SPIDR ANKRD11 NCK2 FYB1 TSPOAP1 NFATC2 RORA-AS1 KLF13 GNG2 CYTIP RUNX3 GALM CDK6 ACTB GAS7 MYH9 ATG5 LRRFIP1 RHOF ETS1 PRKCA CBLB CELF2 ELF1 PITPNC1 SEMA4D AC016831.7 IL21R RIPOR2 BCL9L AL390957.1 AC079313.2 OSBPL3 STK10 AC068896.1 ELL TNFAIP8 AL359736.1 DNM2 HECW2 TNIP3 MACF1 ZNF652 ICA1 TTC33 MBNL1 SETBP1 RHOH FYN PIP4K2A CCDC69 GNGT2 SMG6 WWOX AC069368.1 SMAD3 AP000311.1 FOXN3 ST3GAL1 PTPRJ ELMO1 MBP XYLT1 AC006369.1 MGAT5 LCP2 FOXN2 AL163932.1 GPRIN3 INPP4A LRIG1 HIVEP3 SLC25A26 FAM129A MCM9 SYNE1 RIN3 LINC01588 ZNF831 SMAP2 PTPRC CASP9 HECTD1 ARHGAP15 MTMR4 TLE4 ITK PRKCQ ARHGEF3 MPP7 FKBP5 ARSG\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell ASAP-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: LEF1 ST3GAL1 TXNIP ANKRD44 TCF7 STIM1 MAML2 LINC01126 ITPKB AL133523.1 ABHD15-AS1 SERINC5 FAR1 MAP3K3 HOOK2 SKI AL136368.1 RUNX1 NOSIP FOXP1 TTC39C CSNK1G1 AC008875.1 NRL SLC2A1 CEP85L ETV4 ZNF846 CABIN1 AC022217.3 KAT6A ETS1 CAPN5 TSPOAP1 GRAMD1A AC107375.1 KLF13 LTBP3 THEMIS KLF9 TGFBR2 LINC01478 CASP8 LRRC23 ANKH MAD1L1 LRFN2 CASC11 ELMO1 MGAT4A MAML1 GSE1 TGFBR3 CD247 LDLRAD4 TNFAIP8 SLC12A6 RASGRP1 IKZF2 TOX LINC01588 AC009185.1 C1ORF112 MSI2 ATF4 ATG5 SAP130 KCTD9 RUVBL1 SIN3A IL7R ARHGAP26 KIFC1 ZFPM1 PCIF1 PARVG MRPL50 PKIG BRWD3 SLC30A7 IKZF1 RREB1 SLC38A1 ISOC2 CD44 SLAMF1 AC079313.2 SCCPDH GM2A ST7L CDK19 AC073342.1 CDH23 CCDC34 ADAM8 FGD3 ZC3H4 DZIP3 IFT140 PATL2\n{cell_types}: 'NK', 'unknown', 'Effector CD8+ T', 'Naive CD8+ T', 'Monocytes', 'B', 'Naive CD4+ T', 'Effector CD4+ T', 'DC'.", "role": "user" }, { "content": "unknown", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPL10 RPL13 RPS27 RPL13A RPL18A RPS12 RPL28 PTMA RPS3A RPS19 RPL11 RPS14 RPS23 RPS3 RPL37 RPL39 RPS20 RPL30 HLA-B RPL27 RPS15 RPS9 HLA-DRA RPL29 RPS21 RPS6 RPS7 RPS24 FTH1 RPL6 RPL23A RPL37A HMGB1 UBA52 RPS13 PARP14 RPL3 CD37 IGHM RPL24 GBP4 CD74 RPL9 RPL14 RPL5 SMCHD1 PNISR EIF1 RPL23 RPS15A HSP90AA1 RPS29 UBB JUND RPL38 RPL22 CXCR4 NPM1 EEF1D BCL2 EZR NACA STAT1 HLA-A GBP2 HSP90AB1 HLA-C TMSB4X RPSA NEAT1 HLA-E CD55 EPSTI1 PRPF4B RPL31 TAGLN2 PFDN5 SERF2 GBP5 REL HINT1 HLA-DRB1 SEPT7 YBX1 LTB ISG20 COX7C LARP7 RPL36 ANKRD11 HNRNPU H3F3A ACTB NCL SP100 THRAP3 PRRC2C\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPLP1 RPL13 RPL18A RPS27 RPS14 HLA-DRA RPS19 RPS3A RPL10 RPL13A TPT1 RPS12 RPL11 RPS23 RPL28 RPL37 RPS7 RPS6 RPL37A RPL39 HLA-B RPS29 RPL6 RPS21 RPL23A RPL3 CD74 RPL9 RPS15A RPS13 RPS9 RPL30 RPS3 PTMA RPL5 RPL29 RPL27 RPL14 RPL10A IGHA1 HLA-A RPL23 RPL22 RPSA RPS15 RPL36 HLA-DRB1 MS4A1 RPL38 YBX1 RPL24 RPS20 GAPDH EIF1 HLA-C RPS24 CD37 ACTB HLA-DPA1 PFDN5 GBP1 NPM1 H3F3A GBP4 HNRNPA2B1 HMGB1 BANK1 HSP90AB1 PPIA PRRC2C RIPOR2 FUS ATRX RPL4 FTH1 CYBA SET BTF3 UBA52 AIM2 TPM3 LTB SARAF NAP1L1 N4BP2L2 ARHGDIB PSMA7 SUB1 NCL RPL36AL HERPUD1 GBP2 NEAT1 ZNF644 EMP3 DDX5 DNAJC2 RAN\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPL13 RPS19 RPL10 RPL13A RPS27 PTMA RPS12 RPS23 RPL30 RPL18A RPS15 RPL11 RPL37 TMSB4X RPL28 RPS9 RPL37A RPS3A RPS20 HLA-B RPS14 RPS13 CD74 RPL39 RPS15A RPL23 RPL24 RPL3 RPS7 RPS3 RPS6 RPL9 UBA52 HLA-DRA RPL29 EIF1 HLA-DRB1 HSP90AA1 ACTB MS4A1 NACA HSP90AB1 RPS29 RPL27 RPL14 ZFP36L1 RPL6 RPL5 PARP14 FTH1 RPS24 ATP5F1E IGHM RPL23A RPSA RPS21 DNAJA1 HMGB1 CD37 EZR RPL10A CD83 RPL36 IGHD HLA-A RPL38 RPL22 HNRNPK BIRC3 PFDN5 SERF2 PNRC1 MYCBP2 JUND REL HLA-C HNRNPA2B1 ISG20 PNISR EEF1D WARS CD48 NOP53 PRRC2C CD79B ATP5MG NFKBIA SAMD9L RNF213 ARPC2 PSME1 YWHAZ UBC IFITM2 SET CCR7 SMCHD1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 HLA-B TPT1 RPL13 PTMA RPS19 RPL10 RPL14 RPS23 RPS27 RPS12 RPL30 RPL13A RPL28 HSP90AB1 RPS14 RPS3 RPS6 UBA52 RPL11 RPL39 RPL37 RPL18A CD74 HLA-A RPS15A RPS13 MS4A1 RPL24 CD83 RPL9 RPS24 HLA-DRA RPL23A BCL2A1 RPS3A RPS29 IGHM RPS21 RPL6 RPL23 RPS7 EMP3 RPL29 RPL22 RPL5 RPSA RPL36 RPS15 MIR155HG BASP1 RPL37A PPIA RPS20 HNRNPA2B1 HINT1 REL RPL3 SERF2 ARPC2 HNRNPU UBC NDUFV2 RPL36AL NACA NAP1L1 HLA-DMB JUND PSMA7 HLA-C H3F3A YBX1 BZW1 EIF1 GNG5 ACTB PNRC1 ZFP36L1 CYBA DUT TAPBP ANP32B DDX21 RPS9 ATP5F1E FTH1 ARID4B HERPUD1 NPM1 SPIB TCF4 SLC38A1 UBB GBP2 ATP6V1G1 STK4 RPL10A PLEKHO1 CWC15\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS12 RPLP1 RPL13A RPL10 TPT1 RPL13 RPS23 RPL28 RPS19 RPL18A HSP90AB1 RPL3 RPL11 RPS6 RPS27 RPL30 RPS20 RPS14 RPL37A RPS3A RPS15 RPL9 RPL5 RPS13 RPL23 RPL23A RPS3 RPS7 RPS9 RPL37 RPSA RPS21 RPS29 RPL14 HLA-B ACTB RPL39 PTMA RPL29 TMSB4X RPL27 RPS24 RPS15A HSP90AA1 RPL10A HLA-A RPL24 NCL PARP14 EIF1 RPL22 HLA-C RPL36 UBA52 RPL6 HNRNPA2B1 YBX1 RPL31 H3F3B MS4A1 PSME1 FTH1 WARS ATP5F1E STAT1 MIR155HG YWHAZ CFL1 TXN RPL4 PSMA7 HNRNPU PRRC2C HLA-DRA NACA N4BP2L2 PPIA PABPC1 CD74 AIM2 COX6A1 HNRNPR RPL38 TOMM7 SERF2 SLC25A6 ARPC2 HMGB1 SQSTM1 SON VIM SRRM2 H3F3A IGHM PFDN5 TRIM44 GPX4 HLA-DRB1 SMC6\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPL18A RPS12 HLA-DRA RPL10 RPL28 RPL11 RPS19 RPL13A RPS23 RPL29 RPS15A TPT1 CD74 RPS14 RPL37 RPL30 PTMA RPL14 RPS27 RPS15 RPS6 RPL23A RPS3A TMSB4X RPL39 HLA-A RPL37A UBA52 RPS24 HLA-B RPS7 RPL6 RPL3 RPS9 RPS3 RPS20 RPS13 CD37 RPS29 RPL24 HLA-DRB1 RPL23 RPL27 RPS21 MS4A1 HLA-C SERF2 RPL9 CD79B RPL5 EIF1 NACA RPL36 RPL38 CYBA LTB RPSA RPL10A PSME1 RPL22 CCR7 RPL31 RPL4 CFL1 AES EEF1D ARHGDIB HSP90AA1 PABPC1 YBX1 HINT1 PPIA SARAF ATP5F1E MARCKS LAPTM5 TAGLN2 UBB COX7C SLC25A6 HLA-DPA1 SYNE2 LINC00926 ZFP36L1 CORO1A DNAJA1 PNRC1 BTF3 RALGPS2 CD83 ACTB RPL36AL ARPC2 HMGB1 EIF3G SET FTH1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 TPT1 RPL23A RPL10 RPL13 RPS14 RPS3A RPS27 RPS13 RPL28 RPL11 RPS7 RPL18A RPS6 RPS23 RPL37 RPS15 RPL30 RPS21 RPS3 RPL3 RPS19 RPL5 RPL29 RPS15A RPL24 PTMA RPL39 RPS9 GBP2 HLA-A RPL37A RPL23 HLA-C CCR7 RPL9 RPL13A MS4A1 RPL36 NAP1L1 LAPTM5 HLA-B RPS20 RPL27 RPL6 UBA52 EZR RPL22 RPL36AL CXCR4 BIRC3 TCF4 RPL14 MIR155HG TMSB4X TANK NDUFB6 BRD7 PFDN5 IGHM RPSA STAT1 GBP4 CPNE1 AFF3 AP3B1 CIRBP DEK PABPC1 PNN THOC3 SLC38A2 SARAF IKZF3 SNX9 PRDX6 GOLGA4 JPX NCL ATP5F1E ZRANB2 EIF4G2 DDX6 PXK CCNI ATF1 SQSTM1 LTB COMMD6 DDT PPIA PTPRC HSP90AA1 GRPEL1 GNAS SRPRA SNX3 MIR29B2CHG\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 HSP90AB1 RPLP1 HLA-DRA PTMA HLA-DRB1 RPS19 CD74 RPS12 ACTB RPL10 YBX1 RPL13 RPL28 RPS14 RPL13A HLA-B RPL22 RPL10A HLA-DQB1 RPL23A RPL18A RPL11 RPS23 H3F3A RPL3 RPS24 RPS9 RPL5 RPL6 RPL14 RPL30 RPS7 RPS21 RPS3A RPS15 HSP90AA1 HERPUD1 RPS27 PSMA7 RPS6 NPM1 RPL37 TPT1 HLA-A CALR PRDX1 RPL36 RPL24 LDHA ATP5F1E FABP5 EIF1 HLA-C RPS15A ENO1 RPL29 BTF3 RAN RPL37A HLA-DPA1 RPL38 HNRNPDL RPL9 PARK7 DNAJA1 PPIA HSPD1 NCL RPL23 UBA52 PRMT1 EIF5A HLA-E HMGB1 RPL27 RPS3 HLA-DQA1 RPS13 RPL39 RPS20 PTGES3 HINT1 RPS29 HSPA5 MIR155HG CFL1 PDIA6 REL GNAS UBC FTH1 NACA PPIB RPL31 PPA1 DDX21 SET EIF1AX HNRNPC\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 TPT1 RPL13 RPL10 RPS14 RPS19 RPL13A RPL18A RPS3A RPS27 RPL11 RPS23 RPL30 RPL39 RPS13 RPL3 RPS6 RPS7 TMSB4X RPL9 RPL23A RPL28 RPL29 HLA-B RPS15A RPS21 RPL37 RPS3 RPL37A RPL6 RPS9 RPL14 RPSA RPS24 ACTB HLA-A RPS20 RPS29 RPS15 RPL23 GBP2 UBA52 RPL5 PTMA RPL22 RPL36 NACA HINT1 RPL4 HLA-C RPL10A RPL24 BANK1 GBP1 CD69 HNRNPA2B1 RPL27 VIM HSP90AB1 GBP4 CD37 HSP90AA1 PSME1 SERF2 H3F3A CTSH GBP5 HLA-DRA FTH1 ISG20 RPL31 NOP53 RPL38 PFDN5 IGHM CD74 EMP3 AIM2 CYBA DNAJA1 NCL BAZ1A ARHGAP24 FABP5 RPL36AL CAST SLC25A6 YBX1 ATP5F1E EIF1 SAMD9L N4BP2L2 GNAS CDC42 XAF1 TPM3 BBX SYF2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 RPS12 RPL13 TMSB4X TPT1 RPS27 RPS19 RPS14 RPS23 RPS3A RPL28 RPL11 RPL18A RPS3 RPL13A RPL30 RPS15A RPL3 RPS13 RPL39 RPS6 RPL23A RPS15 RPL5 RPS7 RPL29 RPL14 RPL37 RPS21 LTB RPL9 RPS24 HLA-B RPS9 RPSA RPL6 HLA-C RPL37A RPL10A RPL36 PTMA RPL27 HLA-A RPL23 UBA52 VIM RPL22 RPS20 RPL24 NACA RPS29 IL7R RPL38 GBP5 HINT1 HLA-DRA RPL31 PARP14 ANXA1 GBP4 COX7C HSP90AA1 PTPRC IL32 ACTB CD74 NPM1 SON EEF1D PSME1 YBX1 S100A4 STAT1 PFDN5 ARPC2 FTH1 IGHM HSP90AB1 H3F3A HLA-DRB1 GIMAP4 PSMB9 EMP3 GIMAP7 S100A6 TOMM7 EIF1 CFL1 HMGB1 PPIA EEF2 MYL12A LDHB NCL GNAS SNRPG SERF2 RPL36AL\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPS12 RPL13 RPS14 RPL13A RPS27 RPL18A RPL28 RPS23 RPS19 RPL10 TMSB4X RPL37 RPL11 PTMA RPS3A RPL30 RPS6 RPS3 RPL9 RPS20 RPL39 RPS15A RPS13 HLA-B RPS15 RPL37A RPL14 RPL23A RPS21 RPS9 RPL27 RPL3 RPL29 RPL6 RPS29 RPS7 UBA52 CD74 HLA-DRA RPL23 RPS24 RPL10A RPL36 RPL22 RPL24 RPL5 RPSA HLA-A RPL38 LTB NACA NEAT1 CD37 HSP90AB1 RPL31 FTH1 BANK1 SERF2 CCR7 HLA-C VIM GBP4 CXCR4 PPIA HMGB1 YBX1 RPL4 DEK ACTB CAST EIF1 JAK1 FNBP1 NOP53 DDX17 NAP1L1 ZFP36L1 EEF1D PNRC1 H3F3A HSP90AA1 GAPDH EEF2 AKAP13 LAPTM5 YWHAZ HINT1 PFDN5 CALM1 SMCHD1 SEPT7 SSU72 PDCD4 IRF2 HLA-F RAN COX8A\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 TMSB4X RPL13 RPS12 RPL28 TPT1 RPL13A RPS15 NEAT1 RPL11 RPL29 RPL6 RPS9 RPS27 RPL18A PFDN5 RPL9 RPS7 RPS14 RPS19 RPS6 IKZF1 RPLP1 NACA CDC42SE2 RPL22 FTH1 RPL23 RPL23A IL32 RPL39 RPS23 RPS3 HINT1 RPL30 CASP8 PTMA LTB S100A11 ACTB HSP90AB1 RPS3A GIMAP7 RPL36 RPL24 RPL38 PABPC1 RPL37A IL7R HNRNPH1 DOCK8 LRRFIP1 PNN RPS13 RPL10A SLC38A2 UPF2 GCC2 RPL36AL LPGAT1 RPS15A BID IFI16 PDXDC1 KTN1 NAA25 PTBP3 VIM MORF4L1 STX8 FN1 EBAG9 MAPK14 MAST4 SMARCA5 N4BP2L2 RPSA UQCRB S100A10 SRSF7 TALDO1 RPS21 KMT2C ATP5F1E HLA-B RPS29 CYP1B1 CHCHD2 RPS24 UBA52 ACAP1 ARHGDIB S100A6 TRIR GNLY SORL1 GBP2 ZNF292 RPL31\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPL10 RPS12 RPS27 RPL13A RPS14 TPT1 RPL30 PTMA RPL28 RPL18A RPS19 RPS23 RPL11 RPS3 RPS3A RPS15A RPL37 RPL29 RPL37A RPS6 RPL3 RPL6 RPL39 RPS13 RPL14 HLA-DRA RPL9 RPL36 RPS15 CD74 RPS21 RPL23 RPL5 RPS7 HLA-B RPL23A RPS9 RPL10A RPS29 RPL22 TMSB4X RPS24 RPS20 RPL27 NACA RPSA RPL38 FTH1 UBA52 RPL4 RPL24 CD37 LTB HMGB1 HINT1 RPL31 HLA-A HLA-C HLA-DRB1 TOMM7 BTF3 HLA-E IGHD ACTB ATP5F1E CYBA H3F3A PABPC1 FXYD5 PFDN5 PNISR PSMB9 BANK1 EEF1D CXCR4 NAP1L1 LAPTM5 SLC25A6 NPM1 MS4A1 SERF2 COX7C RPS4Y1 NOP53 RPL36AL PRRC2C BOD1L1 ARGLU1 YBX1 PRDM2 HNRNPA2B1 GAPDH EIF1 CD79A HLA-DPA1 HSP90AA1 CWC15\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS12 RPLP1 RPL10 RPL13 TPT1 RPS14 RPL11 RPL13A RPS27 RPL28 RPS23 RPL30 RPS3A PTMA CD74 RPS19 RPL18A RPS13 RPS6 RPL14 RPS15A RPL29 RPL37 RPL9 RPS3 RPSA RPL37A HLA-DRA RPL3 RPL39 RPS15 HLA-B RPS20 RPS21 RPL23 RPL6 RPS29 RPL5 RPL23A NACA RPS24 RPL24 TMSB4X HLA-DRB1 RPS9 RPL22 EIF1 RPL36 ACTB HLA-A RPS7 HSP90AB1 ISCU RPL31 UBA52 RPL27 TCF4 RPL10A FTH1 HMGB1 RPL38 NAP1L1 GSTP1 VIM CD37 RPL4 ID3 H3F3A GPX4 MS4A1 EMP3 JUND YBX1 HNRNPA2B1 EEF2 SET BTF3 COX7C TALDO1 CXCR4 RAD21 PSMA7 IGHM HSP90AA1 EEF1D STAT1 GNAS PRRC2C BOD1L1 NDUFB2 GAPDH ORAI2 HINT1 MYL12B PNRC1 SLC25A6 DNAJA1 PHF3 HLA-C\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPS23 RPL13 RPL10 RPS19 RPL18A FTH1 RPL28 PTMA IGHM RPS12 RPS14 RPS27 RPS13 HLA-DRA RPL23A RPL39 CXCR4 HLA-B RPL13A RPL29 UBA52 RPL11 RPS3 RPL3 RPL6 HLA-E RPS3A RPL37 RPL14 CD74 RPL30 RPL22 LAPTM5 RPL9 CD37 DEK RPL23 BCL11A RPS9 RPS21 HLA-DRB1 SERF2 PTPRC RPS15 RSBN1L HSP90AB1 RPL10A RPL37A CCNI SYNE2 IGHD ACTB UBC RPS6 HMGB1 TMSB4X JUND NEAT1 HLA-C RPL4 LINC02397 EEF1D CALM1 ISG20 EEF2 ZFP36L1 LYN PSMA7 SRSF11 S100A6 PMAIP1 RPSA PNN GNAS PPIA NACA FAM133B SP110 RPS20 RBM25 RPS7 ITM2B CD200 RIPOR2 VPS13C HSP90AA1 SMARCA5 AKAP9 CD79A TOMM7 PAPOLA BCL2 IKZF1 ORAI2 HNRNPA2B1 HLA-DQB1 RPS29\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 RPL13 RPS23 RPS3 RPL10 RPL28 TPT1 RPS27 RPL18A RPS6 RPL11 RPS19 RPL3 RPS14 RPS3A RPS15A RPL37 RPL30 RPS15 RPL13A RPL39 RPL29 RPS24 RPL23A RPS9 RPS13 RPS20 RPL37A RPL9 PTMA HLA-B RPL14 RPS7 RPSA RPL5 RPL6 UBA52 RPS21 HSP90AB1 RPS29 RPL10A RPL27 RPL36 RPL22 RPL38 RPL24 NACA HLA-DRA HLA-C RPL4 RPL23 EMP3 EIF1 EEF1D RPL31 HINT1 HLA-A ACTB YBX1 PPIA GBP1 ATP5F1E ISCU CD74 TMSB4X PSME1 COX7C HLA-E NPM1 HMGB1 CD37 TOMM7 YWHAZ VIM PFDN5 CANX AIM2 CFL1 ANP32B PSMB1 STK4 CD48 YWHAB CD83 HLA-F SLC25A6 GBP5 PRRC2C RABAC1 EEF2 UBE2L6 CHCHD2 REEP5 UBB REL CD53 CMTM6 ATP5F1D\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPS12 TPT1 RPL18A RPL10 RPS27 RPS19 RPS3A RPL13A RPS14 RPL28 RPS23 RPL30 CD74 TMSB4X RPL3 PTMA RPS6 RPL37 HLA-DRA RPL39 RPS13 RPL6 RPL11 RPS3 HLA-DRB1 RPS15A RPS7 RPS20 RPL14 RPS15 RPS9 RPS21 RPL23A RPL23 RPL29 GBP4 HLA-B RPL37A RPL10A CD83 RPL9 CD37 FTH1 NACA RPL5 IGHM RPL27 RPL24 HLA-DQB1 PARP14 EIF1 PNRC1 STAT1 HLA-A MS4A1 JUND RPS29 UBA52 RPL22 PABPC1 PFDN5 REL RPL36 RPSA EEF1D CD79A PSMB9 HSP90AA1 CCR7 HINT1 RPL38 HLA-DQA1 HLA-E HSP90AB1 ACTB RPL31 GBP1 PPIA NAP1L1 BANK1 RPS24 IGHD NOP53 BIRC3 HLA-DPA1 TOMM7 SIPA1L1 PTPRC PSME1 COMMD6 YBX1 SERF2 EZR CD48 EIF2AK2 HLA-C ORAI2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPL10 TPT1 PTMA RPS12 RPL11 RPS23 RPS27 RPS19 RPL18A RPL28 RPS14 RPL13A RPL30 TMSB4X RPS15A RPS15 RPL23 RPS13 RPS6 HLA-B RPS3 CD74 RPS3A RPL3 RPL37 HLA-DRA RPL23A RPS29 RPL39 RPS21 RPL29 RPL37A UBA52 RPSA RPL38 RPL14 RPS20 RPS9 FTH1 RPL36 RPS24 NACA RPS7 RPL31 RPL22 RPL24 EIF1 RPL4 RPL10A RPL9 NUCKS1 RPL5 CD79A CXCR4 CALM1 PPIA RPL6 CD37 PABPC1 EEF2 HINT1 FAM107B PTPRC ARPC2 FXYD5 CORO1A GNAS GAPDH TPM3 UBC EZR REL RPL27 SRSF7 LAPTM5 ACTB ATP5F1E SERF2 HLA-A ATRX GBP4 EMP3 HNRNPA2B1 GBP5 ANKRD11 CCT3 ISG20 SET MSN SRRM2 MYL12A UBB TOMM7 HSP90AA1 TAF1D HP1BP3 HMGB1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 RPLP1 RPL13 RPL18A TPT1 RPS23 RPS12 RPS27 RPS3A RPS19 RPS14 PTMA RPL11 RPS6 RPL28 RPS15 RPL3 RPL29 RPL23A RPS20 RPL39 RPL37 RPL23 RPL30 RPS3 RPL13A RPS7 RPL14 RPL9 RPS15A RPS9 RPL6 RPL37A RPS13 UBA52 RPS21 HLA-DRA RPSA RPS24 TMSB4X CD74 RPL10A RPS29 HLA-B HLA-DRB1 NACA RPL36 HLA-A RPL5 GBP2 H3F3A RPL31 RPL22 REL RPL24 LAP3 HSP90AB1 EEF1D HLA-C JUND GBP4 RPL27 PARP14 RPL38 IGHM BASP1 PPIA HINT1 ACTB MS4A1 NOP53 RPL22L1 NPM1 SMAP2 ATP5F1E CCR7 SYNGR2 PPA1 FTH1 PRRC2C SRGN FNBP1 TAF1D ARHGAP24 PFDN5 ANP32B EIF3E CLEC2D HNRNPA3 POU2F2 ELK4 YBX1 NCL HSP90B1 BANK1 HMGB1 HSP90AA1 DEK SRRM1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 TPT1 HLA-B RPS19 RPS27 RPL10 RPL28 RPL18A RPS12 IGHM RPL13A RPS23 RPL37 RPL11 HSP90AA1 PTMA RPS13 RPL30 RPS15 RPS3A RPS14 RPL10A RPL37A CCR7 GBP1 RPS9 RPL9 HLA-C GBP4 RPS6 GBP5 HSP90AB1 RPS3 CFL1 HINT1 RPL6 RPL3 RPS21 CD37 PARP14 RPL23A CD74 CD79B NACA TMSB4X EIF1 RPS20 RPL38 PTPRC RPL5 PDIA3 AKAP9 RPL24 RPL23 RPS15A FAM107B RPSA DEK IRF8 RPL39 FTH1 NCL RPL29 GDI2 MS4A1 EEF1D HLA-A LACTB NOP53 RPS24 HNRNPK RPL14 RPS7 LAP3 DAPP1 UBE2L6 PSMB9 IFI16 PDCD4 RNF213 GLS REL GBP2 PTPN1 UBC TMEM123 HMGB1 DDX5 RPS29 CD79A H3F3A PSME1 CAND1 RPL22 HNRNPA2B1 RARRES3 EIF3M NEAT1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 TPT1 PTMA RPL18A RPL10 RPS23 RPS14 RPS19 RPL13A RPL28 RPS21 RPL30 RPL37 RPL11 EIF1 RPL6 RPL23A RPL29 RPS27 RPS15A RPS13 RPS7 RPL27 RPS3 RPS9 RPS12 HLA-B RPL23 RPS15 RPL37A RPL36 HLA-DRB1 RPL14 RPL9 CD74 FTH1 GBP4 UBA52 RPS3A RPL39 TMSB4X RPL22 RPS20 RPL10A JUND RPS24 NAP1L1 HLA-C HSP90AB1 ATP5F1E ATP5MG HLA-DPA1 RAN UBC LAPTM5 RPS6 RPL3 CD37 SMAP2 DRAP1 CAST H3F3A ACTB HNRNPC TAGLN2 RPSA HERPUD1 GPBP1 RPS29 SERF2 IGHM EZR ARPC2 RPL24 SLC25A6 UQCRB COX7C PARP14 REL EPSTI1 ATP5MC2 NASP CCT3 CDC42SE2 NDUFV2 IGHD CFL1 PPIA HLA-E NUB1 PSMA4 HLA-A MPC1 SETD2 BASP1 HVCN1 SKP1 PSMB9\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS27 PTMA RPL18A RPL13 CD74 RPS12 TPT1 RPL13A RPS14 RPL10 RPL30 RPS23 RPL37 RPL28 RPS3A RPS13 RPL3 RPL11 RPS19 RPL39 RPS6 RPL37A RPL23A RPS3 RPL27 HLA-DRA RPL29 RPL36 RPS9 RPS20 TMSB4X RPS15 RPS21 CD37 RPL24 RPL14 IGHM RPL10A RPL9 CCR7 FTH1 RPL22 FAM107B RPS15A RPSA RPL6 MS4A1 HLA-DRB1 PNRC1 NACA ACTB RPL38 HLA-B HLA-DQB1 CYBA HLA-A HSP90AB1 H3F3A EIF3E CD79A REL HMGB1 PARP14 RPL23 RPL4 RPS7 TOMM7 ITSN2 CFL1 JUND RPS29 SQSTM1 RPL5 SET HINT1 TNFRSF13C EIF1 RHOA ZCCHC7 PSME1 UBA52 RALBP1 CYTIP LAPTM5 DARS SON ATM CAPZA1 SFSWAP TMBIM6 HNRNPA2B1 SP100 ATP5PF STX7 EIF3F PABPC1 GSTP1 SACM1L\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 RPL10 TPT1 RPL13 RPS6 RPS24 RPS3A RPL3 RPS23 RPS14 RPS3 RPL30 RPL11 RPL9 RPL28 RPS19 RPL39 RPS9 RPS27 RPS7 RPL37 RPS15A RPS13 RPL18A RPL29 RPS15 RPL6 RPL5 RPL13A GAPDH PTMA RPL37A RPL36 RPS21 RPL10A RPL14 RPL23A NACA RPL23 RPL22 RPS20 HSP90AB1 RPL24 RPL31 UBA52 RPL38 BTF3 ACTB RPSA SRGN TMSB4X FTH1 HLA-A PFDN5 RPL27 ZFAS1 SPN CD74 HMGB1 PPIA HINT1 HLA-B PABPC1 HSP90AA1 H3F3A PNN SNRPD2 NCL RPS29 RNF130 TPM4 EEF2 SET EIF3E YBX1 SERPINB1 ZRANB2 HLA-DRA GNAS PLIN2 SERBP1 GATA2 CDK6 NAP1L1 EIF3A DDX5 EIF1 CALR SUMO2 CHCHD2 IQGAP2 HNRNPH1 EIF3M H3F3B RPL4 COX6B1 PNISR IL1B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS12 RPL13 RPL10 PTMA RPLP1 RPL13A RPS19 RPL28 RPL11 RPS6 RPS23 RPL37A RPL18A RPL3 RPS3A RPS27 RPL30 RPS14 TPT1 RPS24 RPL37 RPS7 RPS13 RPL9 RPL39 RPS3 RPL5 RPS20 RPL14 RPL29 RPL23 HSP90AB1 RPSA RPS15A RPL10A RPS15 RPS9 RPL23A RPL36 REL RPL6 ACTB RPS21 NACA RPS29 RPL27 HLA-A HLA-B RPL22 PABPC1 NPM1 NAP1L1 UBA52 TMSB4X MS4A1 PPIA RPL4 RPL24 NCL YBX1 MARCKS BTF3 HNRNPA2B1 RPL38 EZR ATP5F1E RPL31 HNRNPU SLC25A6 SERBP1 XRCC5 HERPUD1 CD83 CCL22 CD37 DDX5 NEAT1 PFDN5 COX7C PRDX1 EEF2 PRPF4B HLA-DMB CCT3 YWHAZ HLA-E GRHPR RPS4Y1 ARPC5 CHD4 FABP5 FUS VOPP1 UQCRB ACTR2 ZFP36L1 RAN HLA-DRB1 PRRC2C\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 TPT1 RPS12 RPL13 RPS23 RPS27 RPL11 RPS14 RPL18A RPS3A RPL30 RPL28 RPS3 RPS19 RPL3 RPL13A PTMA RPS15 RPS13 HLA-B RPS6 RPL9 RPS20 RPL5 RPL29 RPL23 RPL6 HLA-A TMSB4X RPL14 RPL23A RPL37 RPS9 RPL39 RPS7 RPL10A RPL37A RPS21 CD37 PFDN5 RPSA NACA RPS15A UBA52 HLA-DRA SERF2 RPL38 GAPDH ACTB RPL36 YBX1 RPL27 RPL24 ISG20 RPS24 IGHM HSP90AA1 HLA-C FTH1 CD74 HINT1 SP100 RPL22 RPS29 EMP3 ZFAS1 EEF1D HSP90AB1 RPL4 ID3 GNAS ATP5F1E CYBA RAN LTB CFL1 NPM1 PSMB9 CXCR4 LAPTM5 UQCRB PPIA EZR BTF3 SRRM1 NOP53 IGHA1 RPL31 SYNE2 IFITM2 PCNP GBP4 XAF1 UBE2L6 TMOD2 SERP1 TOMM7 SEPT7\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPL10 RPS12 RPS14 TPT1 RPS23 RPS19 RPS27 RPL30 RPL28 RPL18A RPL11 RPL3 RPS15A RPL13A RPS6 RPS3A RPL5 RPS3 RPL29 RPL37 RPS13 RPL24 RPL39 RPS15 RPL37A RPL23A UBA52 RPL9 TMSB4X PTMA RPS21 RPS9 RPS24 HSP90AB1 RPL6 RPL14 RPS29 RPS7 RPSA RPL10A NACA HLA-A RPS20 ACTB RPL23 RPL22 RPL27 RPL36 CD74 HLA-C HLA-B HINT1 ZFP36L1 YBX1 GAPDH PPIA MS4A1 EIF1 NPM1 HLA-DRA VIM RPL38 RPL31 GBP4 CD37 HLA-DPA1 JUND BANK1 HMGB1 CD48 COX7C CFL1 EIF3F HSP90AA1 ARPC2 UQCRB RPL4 PNISR STAT1 DDX5 HLA-E NAP1L1 RSL24D1 RPL36AL TOMM7 ATP5MC2 FTH1 NCL PFDN5 ANP32B ATP5F1E CD83 LDHB GBP2 COMMD6 FAM107B ELOB\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPS12 RPL10 TPT1 RPS3 RPS23 RPS27 RPS14 RPS3A RPS19 RPL30 RPL28 RPL11 RPS15A RPL18A RPL3 RPS13 RPL13A RPS6 PTMA RPS15 RPL23A RPL37 RPL9 RPS9 TMSB4X RPL14 RPL39 RPL29 RPSA RPL6 HLA-B RPL37A RPS20 RPL5 RPS7 RPS24 UBA52 RPS29 RPS21 LTB RPL36 NACA RPL23 RPL10A RPL27 RPL22 HLA-C RPL24 RPL38 HLA-A PFDN5 RPL4 HSP90AB1 PTPRC EIF1 FTH1 NOP53 BTF3 RPL31 HINT1 UQCRB H3F3A TOMM7 CXCR4 SERF2 SLC25A6 EEF1D GBP4 PABPC1 ATP5F1E NPM1 PSME1 IL32 COX7C PNRC1 ACTB GIMAP7 APRT CD3D HSP90AA1 TXNIP GIMAP4 EIF3E EZR EMP3 CD74 JUND ATP5MG HLA-E ITM2B CD37 PSMB9 ZFAS1 NAP1L1 GNAS CFL1 SYNE2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPL13A RPS23 RPS12 RPS19 RPL10 PTMA RPS3A RPL28 RPS27 TPT1 HSP90AB1 RPS15A RPS6 RPL3 RPL30 RPL18A RPL23A RPL37 RPL11 RPL23 TMSB4X RPS3 RPL6 RPS15 RPL37A RPS14 RPL14 PARP14 FTH1 ACTB RPL29 RPS7 RPL5 RPL27 RPL10A RPS24 RPS13 RPS21 RPS20 IGHM RPSA RPL9 UBA52 RPL36 CD83 STAT1 NCL CD74 MS4A1 HSP90AA1 SET RPL39 HLA-DRA YBX1 RPL22 RPS29 RPS9 PPIA RPL24 GNAS H3F3B PSMB9 WARS PSME1 HLA-B RPL4 RPL38 HLA-C H3F3A RPL31 CCR7 TAGLN2 HLA-DRB1 HLA-A NACA NAP1L1 CD37 FAM107B HNRNPA3 IGHD HLA-DPA1 DDX18 ISG20 KPNB1 TPM3 EIF1 BIRC3 CXCL9 GBP4 PFDN5 GBP1 NPM1 FNBP1 CLEC2D UBXN1 EMP3 PIK3IP1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 TPT1 RPL28 PTMA RPL18A HLA-DRA RPS12 RPS27 HLA-B TMSB4X RPL13A RPS19 HLA-A CD74 RPL10 RPL11 RPS3A IGHM RPS23 NACA RPS14 RPL6 HLA-DRB1 RPS21 RPL9 RPS13 GBP1 RPL39 RPS15A ACTB RPL30 RPS3 RPL14 RPL29 RPS6 RPL23A RPL31 RPL5 FTH1 LTB RPS15 GBP4 RPL3 CD37 RPS7 RPS20 RPL37A CD79A TXNIP RPS24 PARP14 MS4A1 UBA52 RPL23 EIF2S2 SERF2 RPL22 RPL37 HSP90AB1 EIF1 CXCL9 CD53 PSMA7 H3F3A RPSA SNX2 RPS29 PFDN5 RPL27 KPNB1 HLA-DQA1 HLA-DQB1 RPL24 HSPD1 RPS9 HSP90AA1 DNAJC8 TCF4 BANK1 SET ZNF267 YBX3 CFL1 TPM3 RPL38 CALM1 SMCHD1 N4BP2L2 HMGB1 HIF1A TIFA AC245297.3 UBB HLA-C ATP6V0E1 HDGFL3 RPL36 GLDC\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 PTMA TPT1 RPLP1 RPS23 RPL18A RPS27 IGHM RPS13 RPL28 RPL13 RPS19 RPS14 RPS12 RPL13A TMSB4X RPL30 RPS3A RPL10 CXCR4 RPS9 CD37 HLA-B ISG20 RPS3 JUND RPL37A GCC2 RPS15 HLA-C RPL37 RPL39 FAM107B RPS24 NACA CD74 EZR RPL29 LTB RPL27 RPL23A RPL11 RPL6 RPS29 HLA-A FTH1 PARP14 PNISR STK4 RPL23 MS4A1 SMCHD1 CD79A SERBP1 HMGB1 RPL9 SEPT6 RPL38 ACTB AES RPL24 RPS7 RPL14 YWHAZ UBA52 ID3 HLA-DMB LUC7L3 RPS4Y1 SMAP2 RPL31 RPL36 RPS15A RPS20 H3F3A FOXP1 TCF4 RPL3 HINT1 UBXN4 TOMM7 SERF2 MYCBP2 NAP1L1 UBC PNRC1 SPTBN1 CFL1 RPL22 ANKRD13A HSP90AA1 IGHD BAZ1A GBP4 RPL5 ARID5B H3F3B MYL12A RPL36AL CHCHD2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 RPLP1 RPL10 PTMA RPL18A RPS12 RPS27 TPT1 RPS23 RPL28 RPL11 RPS19 RPL3 RPL13A RPS14 RPL30 RPS3 RPS6 RPL37 RPL39 RPS13 RPS15A RPL29 RPS3A RPS15 RPS21 RPS9 RPS20 RPL36 CD74 RPL23 RPL38 RPL6 CD83 RPSA FTH1 CD69 RPL14 RPL37A RPL23A RPL24 HLA-DRA TMSB4X NACA CXCR4 RPL10A EIF1 RPL5 HLA-B RPS7 RPL9 RPS29 JUND UBA52 HLA-A CD37 RPS24 HLA-E RPL27 RPL31 NCL EZR RPL22 PFDN5 HLA-DRB1 PABPC1 REL PNRC1 HSP90AA1 TOMM7 CD79A SEPT7 EEF1D ISG20 RSRP1 STK17A DDX5 RPL4 HNRNPA2B1 LINC02397 HMGB1 HLA-C MS4A1 GBP2 HERPUD1 NFKBIA BCL11A PARP14 NOP53 LAPTM5 CCNI HINT1 CCR7 CALM1 BPTF H3F3A HLA-DPA1 BTF3 SARAF\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 RPL13 PTMA RPS19 RPL10 RPL28 RPS3A RPL13A RPS27 HSP90AB1 RPS23 TPT1 RPS24 RPS14 RPL11 RPL18A RPL30 RPS6 RPL3 RPL6 RPL39 RPS15 RPL29 RPL5 RPS15A CD74 RPS21 RPL14 TMSB4X NCL RPL10A RPS13 RPL23A RPL37 ACTB RPS9 HLA-DRA RPSA HLA-B RPS29 RPL37A RPL9 MS4A1 HSP90AA1 RPS3 HLA-A HLA-DRB1 RPS7 FTH1 UBA52 RPL23 RPL22 RPS20 RPL24 YBX1 HNRNPA3 SET GBP2 EMP3 RPL27 PSME1 EIF1 ATP5F1E IGHM NACA HNRNPA2B1 HLA-DPA1 RPL31 RPL36 GBP5 JUND PARP14 RPL38 STAT1 HLA-C CD79A FAM107B PSMA7 SERF2 H3F3A SYNGR2 PPIA PKM ARPC2 GBP4 HLA-E DDX5 UBB XRCC5 USP15 ZFP36L1 COX7C EZR HLA-DQA1 FABP5 PSMB3 HMGB1 RAN\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPS23 TPT1 RPL10 RPL13A RPS12 RPL18A RPS27 RPL28 RPS3 RPS3A RPL11 RPS19 RPL30 RPL37 RPS13 PTMA RPS14 RPS6 IGHM RPS7 HLA-B CD74 RPL39 RPS20 RPS15A RPL3 TMSB4X RPS9 RPL14 RPS15 RPL6 RPL5 RPL24 RPL29 RPL37A RPS21 RPL23 RPL9 RPL36 RPL23A EIF1 NACA HLA-A NOP53 RPL10A RPSA HLA-C PNRC1 FTH1 HLA-DRA UBA52 RPS29 PARP14 CD37 RPL38 RPS24 HLA-E CXCR4 PSMB9 RPL31 NAP1L1 HMGB1 JUND SERF2 ATP5F1E EEF2 ACTB GBP4 SARAF HINT1 RPL27 PABPC1 HLA-DRB1 STAT1 RPL22 FOXP1 CCNI HSP90AB1 PNISR H3F3A MARCH1 EEF1D SEPT7 BOD1L1 KIAA1551 PDIA3 DEK PMAIP1 TAGLN2 LTB EIF3K MS4A1 SRRM1 JAK1 LAPTM5 SMCHD1 AIM2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 RPLP1 RPL13 RPS27 RPS23 RPL18A RPL13A RPS12 RPS3A RPS19 RPS13 RPS14 TPT1 RPL30 RPS6 RPL37 RPL28 RPS15A RPS3 RPL29 RPL39 RPL11 RPL3 RPL5 RPL9 RPL6 RPS21 UBA52 RPS20 RPS9 RPL37A RPS24 RPSA RPS7 HLA-B RPL14 RPL23A HSP90AB1 RPS15 NACA TMSB4X RPL27 RPL10A RPL22 RPL31 PTMA RPL38 CD79B RPL23 RPS29 FTH1 SLC25A6 NAP1L1 HLA-A GBP4 NPM1 RPL24 PABPC1 CD37 NOP53 GBP1 RPL4 HINT1 HMGB1 EEF1D SYNE2 BANK1 PNRC1 PRRC2C HLA-C GBP2 ACTB GPX4 TOMM7 BTF3 IGHM HLA-DRA ZFAS1 EIF1 PFDN5 SET SEPT7 SON MS4A1 STAT1 EEF2 RPL36AL LAP3 NCL HLA-DRB1 PPIA NDUFB2 H3F3A RIPOR2 HLA-F CD74 SWAP70 SERF2 TAGLN2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 RPL13 RPS12 TPT1 RPS27 RPS3A RPS23 RPS15A RPS14 PTMA RPS3 RPS19 RPL3 RPL13A RPS13 RPL30 RPL18A RPS6 RPL9 RPL28 RPL37 RPL11 RPL37A HLA-B RPS15 RPS7 RPL29 RPL6 RPS9 RPSA RPL39 RPL23 RPL14 RPS20 UBA52 RPL10A RPL5 RPS24 RPL23A RPL27 NACA RPL38 RPL24 CD74 RPS29 PARP14 NPM1 RPL22 HINT1 HLA-E HLA-A PFDN5 RPS21 CD37 IGHM RPL4 PRRC2C SMCHD1 HLA-DRA SP100 RPL36AL PDS5B IFITM2 GBP4 XAF1 OST4 NUB1 NEAT1 CXCR4 ACTB HSP90AB1 HLA-C RPL31 EIF1 TRIR ISG15 CD47 MS4A1 TOMM7 NAP1L1 CCR7 JUND TNRC6B RPL36 ZNF107 BTF3 ARPC2 SERF2 DDX5 XRN1 ARID4A TPM3 YBX1 PNRC1 SET PABPC1 USP8 PNISR\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 PTMA RPL13 RPL10 HSP90AB1 RPS3A RPL28 RPS19 RPS27 RPS23 RPL18A TPT1 HLA-DRA RPS6 RPL9 RPS7 RPL11 RPL23 RPS14 RPL14 RPS24 RPL13A RPL39 RPL29 RPS3 RPS15 GAPDH RPL3 RPL37 UBA52 RPL6 RPL30 RPS9 RPS13 RPL5 RPL36 RPL10A RPL27 CD74 VIM RPL23A ACTB HLA-DRB1 RPS21 NACA RPS29 TMSB4X RPS20 RPS15A RPL37A YBX1 HINT1 REL RPL22 RPL31 HSP90AA1 RPL24 HLA-C PPIA EIF1 HLA-B PRDX1 RPL4 GBP2 NPM1 EMP3 RPL38 PSMA7 HNRNPA2B1 ATP5F1E RPSA LDHA PARK7 CD79A GPX4 CFL1 ENO1 FAM107B JUND PSMB1 PABPC1 RPL36AL COX7C APRT ARPC2 CALM1 EIF5A SNRPB FTH1 SEPT7 ATP5F1D NFKB1 CALR HNRNPF HLA-A SSB NAP1L1 PAK2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 RPS12 RPL13A RPS14 TMSB4X RPS27 RPS19 RPL28 ACTB RPL13 HLA-B RPL23A RPS23 RPL11 TPT1 RPL3 RPS3A RPS13 HSP90AB1 RPS3 RPS6 RPL18A RPL30 PTMA RPSA RPL9 RPS15A RPL37 RPS20 RPL23 RPL5 RPL14 RPS24 RPL24 RPS7 RPS9 RPL10A YBX1 RPL6 UBA52 RPL36 RPS15 RPL37A RPS21 RPL29 RPL27 RPL39 HLA-C MS4A1 HLA-A RPL22 HSP90AA1 NPM1 PPIA NACA RPS29 ATP5F1E CCL22 NAP1L1 RPL38 PARP14 HNRNPA2B1 STAT1 LCP1 RPL31 EMP3 PSME1 H3F3A TPM3 GBP4 REL CFL1 SYNGR2 EIF1 CD83 NCL EEF1D PFDN5 HLA-DQA1 UXT NEAT1 BTF3 ISG20 DDX5 EZR CCT3 ZFP36L1 EIF5 EIF3A PLEKHO1 SRSF3 RAN CD74 PABPC1 CALM1 GPX4 SET SRRM2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPS12 RPS19 RPS23 RPL10 RPL28 RPS27 RPL18A TPT1 RPS3 RPS14 RPL11 RPL13A RPS3A RPL37 RPL30 RPS6 RPL3 RPL23A RPS13 RPL39 PTMA RPL14 RPS9 RPL5 RPS15A RPS7 RPS21 RPS20 TMSB4X RPL24 RPL6 RPL37A RPL36 UBA52 RPL29 RPL9 HLA-B RPS15 RPL23 NACA RPS24 FTH1 HLA-A RPL10A RPS29 JUND HLA-DRA CD74 RPL22 RPSA RPL27 PSMB9 ACTB H3F3A RPL31 HSP90AB1 PFDN5 VIM HLA-DPA1 PSME1 PARP14 BIRC3 ISG20 HMGB1 REL PPIA RPL38 H3F3B IGHM MIR155HG MX1 HINT1 RPL36AL CD37 HLA-E HLA-C UBC CD83 CFL1 CXCR4 HSP90AA1 LTB UBB EEF1D HLA-DRB1 GBP4 SEPT6 SERF2 HLA-DQB1 GBP1 RPL4 NDUFB2 ISG15 NEAT1 MS4A1 TYMP C12ORF57\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPS12 TPT1 RPS27 RPL10 RPS23 RPS19 RPL11 RPS3A RPL13A HSP90AB1 TMSB4X RPS13 PTMA RPL18A RPS14 RPS3 HLA-B RPS6 RPL30 RPS9 RPL28 RPS21 RPL3 RPS15 RPL9 RPS20 RPL5 RPL39 RPL6 GBP5 RPL23A CD37 RPL14 RPL29 IGHM CD83 RPS24 HSP90AA1 RPL27 RPL37A HLA-A UBA52 RPS29 RPL22 NACA RPL37 HLA-C MIR155HG RPL23 SET RPL38 GBP4 RPS7 EIF1 HNRNPA2B1 JUND RPSA MS4A1 PNRC1 EEF2 BANK1 EIF5A RPL10A SLC25A6 RPS15A PARP14 RPL24 H3F3B H3F3A GBP2 RPL31 VIM TAGLN2 HINT1 PFDN5 CD74 RPL36 SFPQ ACTB SP110 SON GBP1 CFL1 EDF1 IFI16 NPM1 DDX5 YBX1 LTB BTF3 MYL12B EEF1D NAP1L1 HLA-E ISCU NASP NCL\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 TPT1 RPL13 RPS27 RPS19 RPS12 RPL30 TMSB4X RPL11 RPS23 RPS14 RPL3 RPS15 RPS13 RPL13A RPS15A RPS3A RPS3 RPL37 RPL18A RPL28 PTMA RPL39 UBA52 RPS20 RPL24 RPL5 RPS7 RPS21 RPS6 RPL9 RPL23A RPSA HLA-B RPS29 RPL36 RPL37A RPL6 RPS9 RPL29 PNRC1 RPL27 HINT1 RPS24 FTH1 HMGB1 RPL10A RPL14 RPL23 EEF1D RPL22 NACA CD74 NOP53 ITM2B DDX5 HLA-A EIF1 PTPRC HLA-C RPL38 RPL36AL STK17A MTDH BTF3 SON CD37 SRRM2 PFDN5 LAPTM5 HLA-DRA IGHM COX6A1 H3F3A UBC ATRX SRSF5 IL7R GNAS DNAJA1 YBX1 HLA-E SERP1 JUND CCNI ISG20 HNRNPA3 NPM1 CD48 TAX1BP1 TRAF3IP3 GBP4 STK4 LTB GMFG PNISR ARHGDIB ATP5F1E\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPS12 RPS27 RPS23 RPL10 TPT1 RPL11 RPS14 RPL13A TMSB4X RPL28 RPS3 RPS19 RPS3A RPL18A RPS6 RPS15A RPL37 RPL30 RPS13 PTMA RPL39 RPL3 RPL23A RPL37A RPS21 RPL29 HLA-B RPL14 RPL9 RPS15 RPS9 RPS20 RPL24 RPS7 RPS24 RPL5 RPSA CD74 LTB UBA52 RPL27 RPL6 NACA HLA-A RPS29 RPL36 CD37 HSP90AB1 RPL10A RPL23 IGHM HLA-DRA HINT1 HLA-C RPL36AL FTH1 NCL RPL38 NOP53 RPL22 UBB EEF1D RPL31 EIF3F CD83 JUND EIF1 PPIA TOMM7 PFDN5 STAT1 GBP4 EEF2 GNAS ITM2B HLA-E H3F3A NPM1 SERF2 PARP14 PNRC1 ISG20 H3F3B BTF3 HNRNPU SLC25A6 EMP3 HMGN1 RBM25 POU2F2 BANK1 MS4A1 PSMB9 HLA-DRB1 HSP90AA1 REL HNRNPDL\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 RPL13 RPS27 RPS12 RPL28 RPS14 RPS23 RPL3 RPS3A TPT1 RPL11 RPL13A RPL18A RPS3 RPS6 RPL6 RPL30 TMSB4X RPL23A RPL14 RPL37 RPL29 RPL37A RPS13 RPS9 RPS7 RPS21 RPL10A RPS19 HLA-A RPL9 RPS24 RPL39 RPS15A NACA RPS20 RPL5 LTB RPS15 RPL23 PTMA UBA52 FTH1 RPL22 HLA-B RPL4 RPL24 RPSA RPL36 ACTB RPL27 RPL38 RPL31 IGHA1 RPS29 SMCHD1 H3F3A CD74 CFL1 BANK1 HLA-DRA MS4A1 RALGPS2 SERF2 EEF1D HLA-C EEF2 PABPC1 PPIA HNRNPA2B1 HINT1 PSMA7 PFDN5 PDCD4 SEPT7 MYL12A BTF3 EIF1 EIF2S2 CD37 CFLAR HSP90AB1 ACTR2 TCEA1 MARCKS MYL12B ARPC2 S100A4 UBB HNRNPC PSIP1 SBNO1 RPS4Y1 MEF2C HSP90AA1 TAGLN2 PARP14 SUMO2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 RPL13 TPT1 RPL10 RPL13A RPL18A RPS14 RPS19 HLA-DRA RPS3 RPS3A RPL11 RPS23 RPS6 RPS27 RPS15A HSP90AB1 RPL30 RPL28 RPL3 RPL9 PTMA RPS9 CD74 RPS13 RPL37 RPL14 RPL23A RPS20 GBP5 RPL37A NCL HSP90AA1 RPS21 RPL29 CD83 NPM1 RPL24 RPL10A RPL39 RPS15 HLA-B HLA-DRB1 RPL23 EEF2 RPL22 NACA RPSA PABPC1 RPL27 UBA52 PPIA NFKB1 HLA-A RPL5 NEAT1 MIR155HG HLA-DPA1 GBP4 YBX1 HNRNPA2B1 RPS7 STAT1 RPL4 NAP1L1 BCL2A1 RPL36AL RPL36 ZFAS1 DNAJA1 EEF1D HLA-DQA1 SRRM2 PTGES3 EIF1 PARP14 RPS24 XRCC5 FABP5 TUT4 BTF3 PFDN5 SWAP70 CFLAR HLA-C RPS29 GBP1 RAN FUS SYNGR2 RPL6 REL RPL31 HNRNPDL EIF5B ST13 RPL38 HLA-E\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 RPL10 RPLP1 RPS12 RPS27 RPS14 TPT1 TMSB4X RPS19 RPL28 RPS23 RPS3 RPL39 RPL18A RPL11 RPL3 RPS6 RPL37 RPS15A RPS3A PTMA RPS13 RPS15 RPS7 RPL23A RPL14 RPL13A RPL30 RPL9 HLA-B RPL5 RPL29 RPL23 RPL6 RPS20 RPS21 RPL24 RPS24 ACTB RPS9 RPSA RPS29 RPL37A HLA-DRA UBA52 RPL36 RPL27 FTH1 RPL10A NACA H3F3A RPL22 RPL38 CD74 HLA-A PTPRC SARAF YWHAB LTB PNRC1 HLA-DRB1 EEF2 SERF2 RPL36AL RPL4 COX7C MS4A1 PABPC1 UBC TXNIP PNISR CYBA RIPOR2 S100A11 NEAT1 HLA-DPA1 SUB1 ATP5F1E GNAI2 EIF1 HMGB1 YBX1 HLA-E S100A6 MYL12A CCNI TOMM7 MTDH LSP1 BANK1 PPIA NPM1 HNRNPA2B1 SP100 EIF3H STK4 PFDN5 SUMO2 SSR2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPS12 TPT1 RPS27 RPS14 RPL10 RPS19 RPS23 RPL28 RPL11 RPS3 PTMA RPL30 RPL18A RPS3A RPS6 RPL13A RPS15 RPL37 RPS13 RPS24 RPL3 RPS7 TMSB4X RPL6 RPS15A RPL37A RPL9 RPL29 RPL23A RPL39 RPS9 RPS20 HLA-B RPL14 RPS21 RPL10A RPL5 RPSA RPL23 RPL36 UBA52 HLA-A RPL27 FTH1 NACA RPS29 RPL22 RPL24 RPL38 ACTB EIF1 HSP90AB1 HLA-DRA RPL4 CD74 H3F3A RPL31 TOMM7 HLA-DRB1 PFDN5 NAP1L1 HLA-C ATP5F1E DDX5 HINT1 SERF2 HSP90AA1 HMGB1 EEF1D SRGN JUND GBP4 PPIA TAGLN2 CD37 PTPRC REL TXNIP UBC NPM1 UBB VIM CFL1 LAPTM5 SON CALM1 HLA-F EMP3 RPL36AL SRRM1 PRRC2C HLA-E EIF4A2 BPTF TPM3 MORF4L1 SRRM2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPS12 TPT1 RPS27 RPS13 RPL10 RPL28 RPS19 RPL30 RPL13A RPS14 RPS23 RPS20 RPL3 RPS3A RPS3 RPS6 RPL9 FTH1 RPL11 HMGB1 PTMA RPL37A RPL5 RPL37 RPS7 RPS9 CD37 RPL18A UBA52 IGHM RPL23A RPL39 RPL38 RPL29 NEAT1 TMSB4X RPS15A RPS15 RPL6 NACA RPL14 PFDN5 HLA-DRA HLA-B KMT2E EEF1D RPL27 CXCR4 RPL10A GBP2 RPS29 RPL23 RPS21 PNRC1 TAX1BP1 JUND PABPC1 RPL36 RPL22 HLA-E LAPTM5 RPS24 REL TCF4 COX7C CD74 HLA-C CCNI FAM214A EIF1 GOLGB1 SP140 NUFIP2 HSP90AA1 RPSA RUNX1 ISG20 ASH1L TUT4 SET TRIM38 PDE4B PRKAG2 ATM NCF1 TBCA RBM25 AKAP13 N4BP2L2 NR3C1 OTULIN PPIA HINT1 PAK2 HNRNPDL ARID5B SLC38A1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 RPL10 RPS3A TPT1 RPL30 RPS14 RPLP1 RPS23 RPL3 PTMA RPS27 RPL13A RPS12 RPS13 RPL11 RPL18A RPL28 HLA-B RPS3 RPS19 UBA52 RPS6 RPS20 RPL9 RPS15A RPL37A RPL29 RPL39 RPL37 RPL10A RPL5 RPS9 RPL14 RPL38 HINT1 RPL6 RPS7 CXCR4 RPL23A FTH1 EEF1D JUND RPS21 RPL24 LTB IFI16 HSP90AB1 DEK TMSB4X RPS15 PFDN5 H3F3A NACA RPL36 SUMO2 RPS4Y1 TRIR SNHG7 CD37 EIF1 RPS29 RPL27 EEF2 N4BP2L2 HLA-A TOMM20 ISG20 CDV3 RPSA CD83 ZFP36L1 SON UBC RPL4 SLC25A6 RPL22 HNRNPF NT5C3A SSR2 RPL31 BCL11A TUBA4A LUC7L3 CFL1 CLEC2D BTF3 BRD4 HLA-DRA CTDSP1 VASP PNN ACAP1 PARP14 CD48 HNRNPA2B1 RPL23 SYNGR2 PNISR NCOR1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPL13 RPS12 RPS27 RPS23 RPL28 RPL10 RPS6 RPS14 RPS3A RPL13A RPL3 RPL18A RPL30 RPS19 RPS13 RPL11 RPL6 RPL29 RPS3 RPL9 RPL23A RPL37 RPS9 RPS15A RPL39 RPS21 RPS15 RPL36 RPL23 RPL24 RPS20 RPS29 RPL5 RPL37A RPS7 ACTB RPS24 NACA HSP90AB1 RPL14 HLA-A RPL31 PTMA RPSA HLA-B HSP90AA1 RPL27 PSMB9 PFDN5 RPL10A UBA52 RPL22 HNRNPA2B1 NAP1L1 YBX1 TMSB4X ARHGAP24 PSME1 RPL38 MS4A1 HINT1 EMP3 FTH1 IGHM CFL1 PTGES3 YWHAZ HLA-C BIRC3 POU2F2 EEF1D SET RPL4 BANK1 PPIA MIR155HG STAT1 ATP5MC2 CD37 EEF2 GAPDH HERPUD1 UXT GBP2 LYN COX7C KTN1 ID3 SLC25A6 NCL ZFP36L1 DDX5 TAGLN2 CFLAR SERBP1 RPS4Y1 ISG20\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPL13 RPS27 RPS3A RPS23 RPS12 RPS3 RPS14 RPL28 RPL11 HLA-DRA RPL30 RPL18A RPL13A RPL10 CD74 RPS15A TMSB4X RPS13 PTMA RPS7 RPL3 RPS6 HLA-B RPL37 RPS24 RPS15 RPS21 RPL29 RPL22 RPL9 RPL36 RPSA RPL23A RPS29 RPS9 RPL14 RPL10A RPS19 RPL5 RPL6 RPL37A UBA52 RPL39 HLA-A HLA-C RPL27 CD37 LUC7L3 RPS20 RPL23 PSMB9 CXCR4 ACTB SERF2 LAPTM5 HLA-E BTF3 YBX1 CD79A H3F3A HLA-DPA1 RPL4 RPL24 EEF1D GBP2 PCBP2 NACA FAM107B CYBA HSP90AA1 BANK1 PFDN5 CCDC50 TOMM7 UBC TOP1 RARRES3 HLA-DRB1 PARP14 SEPT7 UQCRB RPL31 EMP3 CCT5 TRIR PNISR PDCD4 CALM1 MTIF3 POLR2L RPL38 GBP4 IMP3 TCF4 ATP5F1E UBE2L6 HMGB1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPL13 RPS14 RPL13A RPL10 RPS12 RPL30 RPS3A PTMA RPS27 RPS3 RPL39 RPS6 RPS19 RPS15A RPS23 TMSB4X RPL18A RPL28 RPL11 RPL3 RPL27 RPL29 RPL37 RPL6 LTB RPS15 RPS7 RPS29 CD74 RPL37A RPS20 RPS21 RPL23A RPL9 RPL5 RPL36 HLA-B RPL24 CALM1 RPS13 UBA52 RPL23 RPL10A RIPOR2 RPL14 HLA-DRA MS4A1 IGHA1 NEAT1 RPL38 RPL4 SP100 NACA ARPC2 GBP4 RPS9 HLA-A PARP14 TOMM7 RPL22 GAPDH RPL31 YWHAZ CD37 SMCHD1 HLA-E UBE2D2 ATP5MG UBC H3F3A PFDN5 FTH1 FAM49B AES HLA-C ID3 HMGB1 PRRC2C LCP1 SRRM2 SCAF11 PNRC1 RNF213 YWHAB TPM3 ATP5F1E RPSA HINT1 ACTB TERF1 HP1BP3 CCNI CORO1A PSME1 TMEM154 PCM1 PNISR\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "B", "role": "assistant" } ]

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