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[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPL10 TMSB4X RPLP1 RPL13 RPS12 RPS3A RPS14 RPS27 RPL30 RPS3 RPL28 RPS23 RPL23A RPL3 RPL11 RPL18A RPS15A RPL13A PABPC1 RPL36 RPS20 RPS15 RPS7 RPS6 RPL37 RPL14 RPL5 RPS9 PTMA RPL38 GIMAP7 RPS19 RPL29 RPL39 RPS21 FTH1 RPS13 RPSA RPL9 RPL6 RPS24 RPL27 HLA-B RPS29 RPL22 CALM1 CXCR4 GIMAP4 NACA HLA-A SARAF RPL24 RPL37A GAPDH FXYD5 NEAT1 ACTB EIF1 S100A10 RPL10A PTPRC TOMM7 EMP3 RPS4Y1 RPL23 HLA-C UBA52 COX7C CCNI EEF2 RPL36AL SET IL32 LRRFIP1 CORO1A CDC42 CD2 RBM25 LTB LDHB CYSLTR1 ZFAS1 PNRC1 NOP53 SLC25A5 H3F3A SON DEK LAPTM5 S100A11 ATP5MG ATP5MC2 ARF1 AQP3 KIAA1551 RPL31 PFDN5 KLF3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS27 RPL30 TPT1 RPL13 RPS19 RPS7 RPL5 RPL10 RPS6 TAF1D RPS24 RPL13A RPS3A RPL9 RPL18A RPL37 RPS13 RPS12 RPL28 EIF1 PRRC2C RPS14 GIMAP7 RPS15A RPS3 PTMA PTPRC SARAF BIRC3 RPL14 RPS23 RPL29 RPL31 GCC2 TMSB4X RPS15 RPL6 RPL37A H3F3B HLA-A AKAP9 RPL27 NACA PNRC1 FOXP1 NFKBIA HLA-B STK17A ZBTB1 RPS20 RPL36 TXNIP NUCB2 RPL22 RPS21 LEPROTL1 PSIP1 OSBPL8 ELF1 BATF RSBN1 NOL7 RPS29 CIRBP TCF7 RPL36AL TMEM245 ZC3H7A TANK RPSA HLA-E RPL23A LUC7L3 RPL39 CALM1 GADD45B BTF3 SKIL LEF1 RPL24 RSRC2 CDC5L SLC38A1 MIER1 XRN2 PHF20L1 OCIAD2 FTH1 RBM39 UBA52 IL7R EIF5 CYTIP RPL11 HLA-C HNRNPA2B1 ORMDL1 HBS1L\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS12 RPL13 RPLP1 RPL10 TPT1 RPL28 RPS14 RPS3 RPS27 RPL30 RPS3A TMSB4X RPS6 RPS23 RPS15A RPL39 RPS13 RPL11 RPL18A RPL37 RPS15 RPL13A RPS19 RPL37A RPL9 RPL23A RPL5 RPL14 RPL3 RPS21 RPS7 RPL29 RPL36 RPS29 RPL23 RPS9 RPL38 LTB NACA RPS20 UBA52 RPSA PTMA RPS24 RPL6 RPL24 NEAT1 RPL10A RPL36AL HLA-A RPL22 GIMAP7 RPL31 TOMM7 IL32 EMP3 VIM RPL27 H3F3A HLA-B PABPC1 HSP90AB1 RPS4Y1 EEF1D HLA-C IL7R BTF3 NPM1 LDHB HINT1 PFDN5 PTPRC EIF1 CALM1 S100A6 CXCR4 ATP5F1E UXT SUB1 PIM1 NCL FKBP2 ACTB SET S100A4 SERF2 AES PNRC1 CISH EEF2 SF1 S100A11 KRAS HSPD1 C12ORF57 HSP90AA1 PPIB IKZF3 HNRNPK\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS12 TPT1 RPLP1 RPL13 RPL10 RPL28 RPS27 RPS3 RPL3 RPS14 RPL30 RPL11 TMSB4X RPS19 RPS3A RPS23 RPS6 RPL18A RPL13A RPS15A RPL39 RPL14 IL7R RPL37 RPS15 RPS13 RPL23A RPS9 RPL29 RPL5 RPS7 RPS21 RPS24 RPL9 RPS29 LTB RPL10A HLA-B UBA52 RPL24 RPL6 S100A4 IL32 RPL38 NACA RPS20 RPSA VIM RPL36 RPL23 RPL37A RPL22 NEAT1 PTMA RPL27 NOP53 PTPRC HLA-A EEF1D TOMM7 RPL31 GNAS S100A6 HSP90AA1 RPL36AL FTH1 PPIA S100A11 COX7C GIMAP4 PABPC1 HLA-C PFDN5 ACTB GIMAP7 HINT1 PRRC2C YBX1 GAPDH TXNIP ARL4C H3F3B UQCRB EIF1 EMP3 ITM2B RPL4 RPS4Y1 LDHB NPM1 H3F3A ATP5F1E EEF2 ARHGDIB CALM1 BTF3 ARPC2 SON SERF2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 TMSB4X RPLP1 RPL13 RPS27 RPS3 RPS12 RPL10 RPS14 RPL28 RPL11 RPL13A RPS3A RPS19 RPL18A RPS15A RPS6 RPL3 RPL30 RPS23 ACTB RPL39 RPL6 RPL14 RPL9 RPL37A IL7R RPL37 S100A4 RPS13 RPL29 IL32 RPS15 HLA-B RPS9 RPS7 NACA RPS21 RPL5 PTMA RPL23A RPL36 RPL10A LTB RPS20 RPL31 RPSA UBA52 RPS24 VIM PFDN5 RPL27 RPL23 RPS29 RPL38 HLA-A STAT1 GIMAP7 HINT1 CALM1 GBP5 ANXA1 RPL24 S100A11 RPL36AL RPL22 HLA-C ATP5F1E GAPDH FXYD5 H3F3A HNRNPU S100A6 HSP90AA1 GBP1 PTPRC S100A10 EIF1 RPS27L NCL HSP90AB1 HNRNPA2B1 MYL12B CFL1 ITM2B PNRC1 NEAT1 YBX1 H3F3B FTH1 PTGES3 EEF1D ARPC2 SERBP1 PRRC2C MYL12A ENO1 HLA-E SLC25A6\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 RPL13 TPT1 RPS12 RPS14 RPL13A RPS3 RPL28 RPL30 RPL3 RPS19 RPS3A RPS27 RPL11 RPS15A PTMA RPL39 RPL9 RPS7 RPL37 RPS6 RPL14 RPL29 RPS23 RPL23A RPS24 RPL6 RPL18A TMSB4X RPL5 ACTB RPS20 RPS29 RPS13 RPS15 RPL10A RPS21 RPL36 RPL23 RPL37A S100A6 HLA-B RPSA UBA52 CD2 LTB PABPC1 RPS9 HLA-C RPL24 IL32 RPL22 HLA-A RPL36AL NACA HSP90AB1 PFDN5 VIM RPL38 RPL4 RPL27 RPL31 TOMM7 S100A4 ATP5F1E STAT1 CD3D SERP1 GIMAP7 BTF3 NOP53 PRRC2C S100A11 CALM1 PPIB SLC25A6 ARL4C HSP90AA1 KTN1 OST4 EEF1D CFL1 NAP1L1 CYBA COX7C CAST PDIA3 KLF6 YBX1 SUMO2 KIAA1551 ITM2B LMAN1 ANXA1 ANP32E SYNE2 NEAT1 SEC61G\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TMSB4X TPT1 RPL13 RPS27 RPL10 RPS19 RPL30 RPS14 RPS3 IL7R RPL28 RPL18A RPS23 RPL11 RPS15A RPS12 RPS3A RPL13A RPL39 RPS6 RPL3 RPL14 RPL37 RPS7 RPL23A RPL29 LTB UBA52 RPL9 RPS9 RPL24 RPL27 RPSA PTMA NACA RPL6 RPS20 ITM2A RPL36 RPL23 HLA-B RPS24 HLA-C RPL10A S100A4 FTH1 RPS15 ITM2B HLA-A RPL37A RPL31 RPS13 EIF1 RPL22 RPS21 PTPRC NEAT1 RPL36AL RPS29 PPIG RPL5 RPL38 ANXA1 HINT1 NDUFV2 ARHGDIB UBC TOMM7 PPIA TNFRSF4 BTF3 STK4 S100A6 GIMAP7 S100A10 LINC00861 GNAI2 CYBA TRAT1 SRGN MPHOSPH8 H3F3A CORO1A ATP1B3 RBM25 S1PR4 YBX1 ETS1 EMP3 EIF4G2 SMCHD1 SON COMMD6 AKAP9 PNISR SYNE2 LCK VIM\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X PNRC1 RPLP1 PTMA RPS7 TPT1 HLA-B RPL18A RPS27 RPL13 RPS13 RPL37A RPS14 GIMAP7 RPL3 RPL23A HLA-A RPL13A RPS12 RPS3A HINT1 RPL11 RPL10 HLA-C RPS19 RPS20 RPL30 BIRC3 RPL28 LTB RPL6 RPS15A RPL36AL RPL14 SARAF ZFAS1 DDX5 PTPRC UBC RPS23 YBX1 DEK HNRNPU RPS15 RPL9 STK17A RPL27 SFPQ RBM39 UBB ATP6V1G1 EMP3 SNRPG H3F3B RPSA PNN EIF1 H3F3A ITM2B HLA-E RPL24 TAF1D RPL39 NACA PSME1 UBA52 MIER1 CIRBP RPL38 SRRM2 ARRDC2 FTH1 ERBIN NCL CXCR4 RNF114 PABPC1 LEPROTL1 HIST1H4C RPL37 PPIA HSP90AA1 HNRNPA2B1 EIF5 RPS9 COX6A1 SF1 RPS21 NFKBIA RPL36 EIF5A JUND DDX46 RSRP1 LYSMD2 MSL3 MYCBP2 SERBP1 CDC42\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPL13 RPLP1 RPS19 RPL10 RPS12 RPS14 RPS15A RPL28 IL7R RPS3A RPL3 RPL13A RPL30 RPS27 RPS6 RPS3 RPS23 RPL11 RPL14 RPL18A TMSB4X RPL23A RPL29 RPS13 RPS7 RPL5 RPL9 PTMA RPS9 RPL39 RPL37A UBA52 RPS21 RPS15 RPL6 RPL37 EMP3 RPL4 RPS20 HLA-B PTPRC RPL38 RPL36 RPL10A RPS24 RPL24 NACA LTB RPS29 HLA-C GIMAP4 RPL22 CFL1 HLA-A GIMAP7 BTF3 ITM2B FTH1 SARAF PFDN5 PABPC1 RPL31 RPSA LDHB NPM1 SERF2 RPL27 IL32 FAM107B STK38 NAP1L1 EEF1D CNOT6L CD2 PNRC1 RPL23 BIRC3 RPL36AL JAK1 NCL TOMM7 CDC37 PDCD4 CALM1 ARL4C ATP5F1E YBX1 SORL1 STK17B CAST EEF2 SP140 ZFAS1 EIF1 TRIR SEPT7 FNBP1 SOD1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPS12 RPL13 RPLP1 RPL10 RPS14 RPS23 RPS27 RPL30 RPS15A RPS3A RPL3 RPS19 RPL39 RPS13 RPL28 RPL11 RPS3 RPS6 RPL37 RPL18A RPL13A RPS15 RPL9 LTB RPL37A RPL23A RPS24 RPL36 TMSB4X RPL29 RPL5 RPL24 RPS21 RPS7 RPS9 RPL14 RPL23 RPS29 RPL22 RPSA PTMA PFDN5 RPL38 RPL10A NACA HLA-B RPL6 RPL27 CXCR4 PNRC1 UBA52 NPM1 PPIA PTPRC COX7C RPL36AL BTF3 SERF2 ATP5F1E SLC25A6 SRSF10 PABPC1 SUMO2 FTH1 H3F3A HINT1 ARL4C H3F3B CD3D PSIP1 ADD3 MYL12A APRT EIF3F HSP90AB1 PRRC2C HNRNPA3 EEF2 PNISR CNBP HLA-A RPS4Y1 ARL6IP5 HLA-E C12ORF57 RPL4 TCEA1 EIF5B HNRNPA2B1 SNHG8 EIF4A2 HMGN1 HSP90AA1 NSD3 GPX4 EVL UBE2B DEK\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPL13 RPL10 RPS12 RPS27 RPL13A TMSB4X RPL11 RPL28 RPS14 RPS3A RPL30 RPS15A RPL18A RPS6 RPS3 RPS23 RPS13 RPL29 RPS19 RPL3 RPS20 RPL39 RPL6 RPL5 RPL23A RPL37 RPS24 RPL9 RPS29 RPS21 RPS9 RPL37A RPS15 RPL14 RPL10A UBA52 RPL31 RPS7 RPL22 ANXA1 LTB RPL38 RPSA RPL36 NACA RPL23 RPL4 PTMA RPL27 ACTB HLA-A RPL24 IL32 HLA-C HLA-B S100A6 GIMAP4 TOMM7 MT2A NAP1L1 S100A11 EEF2 HINT1 H3F3A KIAA1551 HNRNPA2B1 YBX1 RPL36AL ARPC2 EEF1D N4BP2L2 SERF2 LDHB S100A4 EIF3E COX7C TXNIP GIMAP7 GAPDH SARAF STAT1 ITM2B UQCRB HMGB1 BTF3 PABPC1 SON RNF213 GBP4 SKP1 GNAS NOP53 DDX46 PNRC1 DDX5 CLEC2D GBP2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 RPS12 RPL13 TPT1 RPL28 RPS14 TMSB4X RPS6 RPS3 RPL18A RPL30 RPS19 RPS23 RPS27 RPL11 RPL13A S100A4 RPS15 RPL14 RPS13 LTB RPL29 RPS21 RPL23A RPL39 S100A6 RPL3 RPL37A RPL37 RPS7 UBA52 RPS24 RPS15A PTMA RPL6 RPS3A VIM RPL5 RPSA IL32 RPL10A FTH1 HLA-B RPL36 IL7R S100A10 CALM1 RPS20 RPS9 NACA RPL27 RPL23 PTPRC RPL24 RPS29 RPL9 RPL31 HSP90AA1 HLA-C ACTB NEAT1 HSP90AB1 ITGB1 HLA-A RPL22 GIMAP7 RPL38 S100A11 ITM2B STAT1 AHNAK GBP5 LIMS1 HINT1 PFDN5 HNRNPA2B1 YBX1 TOMM7 H3F3A ARL4C LDHB ATP5F1E SAMHD1 SERF2 RPL4 SRGN MYL12A CYBA GTF3A SYNE2 ARPC2 COX7C SEPT7 HNRNPU UBC CD3G NPM1 TAGLN2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 RPS12 TPT1 RPL28 RPLP1 RPS14 RPL13 RPS27 RPL11 RPS15A RPS3 RPL13A RPL30 RPL18A RPS15 RPS23 RPS3A RPL37 RPL36 RPL23A RPL9 RPL39 RPS13 RPL14 RPS29 RPS19 RPL3 RPS21 RPS6 RPL29 RPS20 RPS7 TMSB4X RPS24 RPL38 RPL27 VIM RPSA RPL31 RPS9 UBA52 RPL10A RPL24 PTMA RPL5 RPL23 HLA-A HLA-B IL32 RPL6 GIMAP7 RPL37A ATP5F1E HLA-C NACA RPL22 EMP3 LTB FTH1 HSP90AA1 LDHB SRRM2 RPS4Y1 ITM2B PFDN5 ACTB EEF1D S100A4 TOMM7 CYLD GNAS IL7R CD3E CHCHD2 FXYD5 ARL6IP5 HSP90AB1 HNRNPK NAP1L1 EIF1 SERF2 RPL36AL PTPRC AES PPIB CALM1 HINT1 H3F3B ITGB1 SARAF CD3D OST4 RPL4 FKBP2 ATP5MG CKLF HSPD1 PABPC1 ARHGDIB\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 RPLP1 RPL13 TPT1 RPS14 RPS12 TMSB4X RPL28 RPS3A RPS27 RPL30 RPS3 RPS23 RPL13A RPL14 RPL18A RPS19 RPL3 RPL29 RPL11 RPL37 RPS15A RPS13 RPS15 RPL39 RPS6 RPSA RPL23A RPS9 RPS29 S100A6 RPS24 PTMA RPL36 RPL38 RPL37A VIM RPL24 RPS21 RPL6 RPL10A RPL9 RPL5 RPL31 UBA52 S100A11 RPL22 HLA-B RPL23 LTB RPS20 RPL27 RPS7 NACA HLA-C EMP3 HINT1 HSP90AB1 IL7R HLA-A H3F3B RPL36AL EIF1 IL32 NEAT1 ACTB TOMM7 LDHA ITGB1 ARL6IP5 GAPDH COMMD6 PPIA TMEM238 HLA-E EEF1D S100A10 SYNE2 MYL12A ATP5F1E S100A4 PTPRC PCM1 RPL4 GIMAP7 FTH1 H3F3A PABPC1 CFL1 CLEC2D SERF2 CHCHD2 BTF3 HNRNPD EZR HNRNPA2B1 SRSF7 CD48 SARAF\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 RPS12 RPL10 RPLP1 RPS27 TPT1 RPS6 RPS15A RPL30 RPL3 RPL28 RPS3 RPS14 RPS15 RPL11 RPS23 RPL13A RPL9 HLA-B RPS3A RPL23A RPS29 RPL14 RPL37 RPL39 RPL23 RPS13 RPL18A TMSB4X PTMA VIM RPL6 RPS24 RPL29 RPS7 RPL10A LTB RPL27 RPL36 RPS19 RPS21 RPL24 UBA52 RPS9 RPL38 S100A6 GIMAP7 RPS20 RPL5 RPL37A NACA SMCHD1 IL32 RPL31 EIF1 RPL4 HLA-A EEF1D STAT1 RPL22 GNAS HINT1 PFDN5 PABPC1 GIMAP4 RPSA ATP5MG RPL36AL GBP5 CALM1 NCL TGOLN2 ATP5F1E NEAT1 ZFAS1 FTH1 CYLD ANXA1 S100A11 SYNE2 OST4 HMGB1 KIAA0040 ACTB ITM2B NOP53 HLA-C LDHB SP100 HNRNPA2B1 PLP2 TOMM7 CXCR4 IKZF1 PNRC1 CD247 PRRC2C H3F3B DDX5\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 RPL13 RPL10 TPT1 RPL28 RPS14 RPS19 TMSB4X RPS23 RPS27 RPL30 RPL13A RPS3A RPL11 S100A4 RPS3 RPL3 RPL14 RPL18A RPS15A RPL23A RPS15 RPL39 LTB RPS13 RPS6 RPS21 RPL37A RPSA RPL29 RPS24 RPL36 RPL6 RPS29 IL32 RPL9 PTMA VIM UBA52 NACA RPL5 RPL37 RPL10A RPS9 RPL23 HLA-B RPS20 RPL24 RPL38 RPL31 RPL22 RPL27 HSP90AB1 RPS7 GIMAP7 HLA-A S100A6 ACTB RPS27L RPL36AL CALM1 RPL4 CFL1 IL7R EMP3 GAPDH BTF3 NAP1L1 HINT1 NEAT1 PTPRC NPM1 MYL12A ATP5MG S100A10 HLA-C ITM2B HSP90AA1 PPIA S100A11 SUB1 SERF2 SERBP1 UQCRB LDHB PFDN5 EIF3E SUMO2 H3F3A EDF1 COX7C RPS4Y1 C1QBP SSR2 TOMM7 CYBA NCL EIF4B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 NFKBIA EIF1 TMSB4X RPLP1 GADD45B PTMA RPL10 H3F3B UBB DDX5 PNRC1 HSP90AB1 SLC38A2 RPS12 HLA-B NCL TUBB4B TAF1D TPT1 FTH1 RPL6 H3F3A UBC DYNLL1 RPS19 RPS27 ATF4 RPL30 SON RPL18A PRPF4B SRSF3 SRSF7 RPL36 HMGB1 SNHG12 RBBP6 RPS13 NUS1 SET EIF4A2 ARRDC2 ACTB RPL13 YY1 GOLGB1 IER5 N4BP2L2 UPF3A YBX1 RPL24 RPL13A KMT2A RPS20 SMCHD1 BIRC3 NFKB1 EPC1 RBM39 PCF11 JUND HEXIM1 EEF2 ZFAS1 SKIL CNOT6L CD69 RPL23A CHD4 RPL4 RPS24 PTBP1 SRGN RPS29 DDX3Y TBC1D15 USP16 KTN1 HNRNPU EIF3H RPL9 LRRFIP1 HSPA5 TNFAIP3 CLK1 DNAJA1 HNRNPH1 ERO1B RPS14 PRDX1 ZC3H15 RPL3 GADD45A HSPD1 CCAR1 STK17A IL7R OSBPL8 DHX9\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 TMSB4X RPS12 RPL13 TPT1 RPL13A RPL28 RPS14 RPS27 RPS23 RPS15A RPL30 RPL37 RPS3A RPS19 RPS24 RPL6 IL7R RPS6 RPL39 PTMA RPL11 RPL14 RPS21 RPL29 RPS13 RPL3 RPS3 RPL18A RPS7 RPL5 RPL23A RPS9 NACA HLA-B HLA-A VIM RPS29 RPL37A ITM2B RPL9 RPL24 RPL36 RPSA RPS15 PFDN5 COX7C S100A6 HINT1 RPL23 ACTB UBA52 RPL10A S100A4 FTH1 RPL22 RPL38 LTB CALM1 GIMAP7 HLA-E RPS20 BTF3 YBX1 HSP90AB1 ESF1 PTPRC EEF1D SERP1 FXYD5 HLA-C SMCHD1 ANXA1 NAP1L1 AES TXNIP RPL36AL EIF1 EMP3 GNAS SNU13 DDX46 PPIA HSP90AA1 GAPDH UBC UQCRB MZT2A PNISR ATP5MC2 CORO1A CD3D S100A11 SSR3 C12ORF57 HNRNPA3 TOMM7 SUMO2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X S100A4 S100A6 RPLP1 TPT1 ACTB RPL13 RPS12 IL32 PTMA VIM LTB RPL10 RPL28 RPS27 RPL30 RPL13A RPL37A RPS6 HLA-C HLA-B HLA-A RPL38 RPL18A HSP90AA1 RPS14 RPS24 RPS23 S100A11 RPS19 RPL37 RPS3A RPL11 RPS3 MYL12A HSP90AB1 RPL3 GAPDH RPS20 EMP3 RPL14 RPS15A S100A10 RPL23A RPL24 RPL5 RPS7 RPL39 RPSA RPL36 RPL31 RPL23 CALM1 RPS21 RPL9 UBA52 SERF2 YWHAB RPS9 RPL6 RPS15 ATP5F1E CFL1 RPL27 IFITM2 RPL10A RPL22 PKM MYL12B PTPRC CD3D YBX1 ENO1 ITM2B MRPS6 EIF1 RPS29 TPM3 FTH1 PSMA7 ATP5MG RPS13 BIRC3 RPL29 HINT1 DDX5 PGK1 ARPC2 RPL36AL LGALS3 CORO1A CD2 EVL PSME1 SARAF HLA-E SEPT7 CD3E YWHAZ\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 RPLP1 RPS12 RPL13 TPT1 FTH1 RPS14 RPL30 RPL28 RPS27 RPS3 TMSB4X RPL11 RPS15A RPL13A RPS15 RPS3A RPS19 RPL3 RPL18A RPS23 PTMA RPL14 PABPC1 HLA-B RPL23A RPS13 RPS21 RPL29 RPL39 IL7R RPL9 RPS9 RPL36 PTPRC RPL37 RPS24 RPS6 RPS20 RPSA RPL24 NACA UBA52 RPL5 RPS29 RPL27 S100A11 RPL6 HLA-A RPL23 HINT1 ACTB RPL31 PNRC1 RPL37A VIM NEAT1 CXCR4 EIF1 EEF1D RPL38 EMP3 NR3C1 CALM1 SARAF TOMM7 RPL10A RPS7 PFDN5 H3F3A S100A6 LTB HLA-E PIK3R1 RPL36AL GIMAP7 PPIA TLN1 COX7C GIMAP4 ATP5F1E ITM2B SRSF7 EEF2 PPIB GAPDH H3F3B FXYD5 RGS10 UQCRB IKZF1 ARPC2 LDHB ANP32B RGCC ARL6IP5 EIF3E S100A4 SERBP1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPLP1 RPL14 RPL13A HLA-B RPL23A RPS14 RPS7 RPL30 RPL36 RPS13 RPL6 RPL37A RPL28 RPS19 RPS15A TPT1 RPL24 RPS27 RPL39 RPL18A RPL3 RPS15 RPL38 RPL10 RPS12 SON IL7R RPL13 HLA-A RPL11 RPL9 BTF3 RPS6 FTH1 PTMA RPS24 GIMAP7 RGCC H3F3A PNRC1 TAX1BP1 EIF1 FGFR1OP2 HNRNPU RPL5 RPL23 HINT1 RPS23 RPS27L DDX17 SRRM1 COX6A1 RPL36AL UBA52 H3F3B RPS3A RPS20 DDX21 PHIP HLA-C RPL29 SCAF11 SNX6 EMP3 RAB21 YY1 TLK1 CD3D UBC DEK MYL12B SLC3A2 RPS9 HNRNPA2B1 SET HNRNPA3 HMGB1 STK4 CREBRF COX7C RPL22 ANKRD11 PPIG SARAF PSMA7 HECTD1 CCDC58 CD3G LTB SOD1 NDUFA4 RPL37 ATRX DDX5 TCF7 NOL7 RSL24D1 GNAS\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: TPT1 RPS19 RPL13 RPS12 RPL10 RPL28 RPLP1 RPS14 RPS3 RPS27 RPL3 RPL13A LTB RPS23 RPS15A RPL30 TMSB4X RPS6 RPL11 RPL9 RPS3A RPL14 RPL23A S100A4 RPL18A RPS15 RPL29 RPS13 RPL23 MALAT1 S100A6 RPL37 RPL39 RPL6 RPL5 RPL37A RPL10A RPS7 RPSA RPS9 RPS24 RPL31 RPS21 RPS20 IL32 CALM1 PTMA RPL24 RPL36 RPL38 NACA HSP90AB1 HLA-B UBA52 RPS29 VIM RPL27 YBX1 RPL22 HSP90AA1 RPL4 ACTB IL7R PABPC1 AQP3 ENO1 RPL36AL RPS4Y1 COX7C S100A11 NPM1 ATP5MG LDHB ARL6IP5 ITM2B PFDN5 EEF2 EMP3 EEF1D HLA-A S100A10 SERF2 SLC25A3 PPIB NAP1L1 BTF3 HINT1 EIF1 PPIA HNRNPA2B1 RIPOR2 OST4 SUMO2 GIMAP7 MAL ITGB1 COX7A2 EIF3G TOMM7 SON\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 TPT1 RPS12 RPL10 RPS27 RPS19 RPL28 IL32 RPL11 LTB RPS3A HLA-B RPS14 RPL30 RPL18A RPL13A RPL9 RPS15A RPS6 RPS3 RPL39 RPS15 RPL10A RPL37A RPS13 RPS23 RPL3 RPL6 RPL23A RPS29 RPS21 TMSB4X RPL24 HLA-A RPL14 RPS7 RPL29 RPS20 RPL5 HLA-C RPS24 PTMA RPSA RPL37 RPS9 ACTB RPL23 RPL22 H3F3A RPL27 RPL38 GBP5 EMP3 HSP90AA1 HNRNPA2B1 HINT1 BTF3 EEF1D RPL31 EIF1 FTH1 RBM17 CHCHD2 HSP90AB1 ARHGDIB ATP5F1E PFDN5 S100A6 FXYD5 NACA UBA52 SUB1 PSMA7 RPL36 LIMS1 SLC25A6 ISG20 PSME1 GAPDH SOD1 SERF2 DDX18 TXN SUMO2 LGALS3 PRELID1 BIRC3 SRRM2 CD3D GBP1 COX7C PTPN7 DDX5 CMTM6 SET ARPC2 NFKB2 SLC25A3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 RPLP1 RPL10 RPS12 RPS14 RPL13A RPL28 TPT1 RPS19 RPS3A RPS27 RPS3 RPS23 RPL30 RPL3 RPL18A TMSB4X RPS6 RPL14 RPL11 RPS15A RPL36 IL7R RPS15 RPL29 RPS13 RPL39 RPL9 RPS20 RPL23A RPS24 RPL5 RPS7 PTMA RPSA RPL37A RPS9 RPL24 UBA52 RPL37 RPL10A RPS21 RPL27 NACA RPL22 RPL6 VIM IL32 RPL31 RPS29 EIF1 RPL23 S100A6 HLA-B LTB RPL38 S100A4 PFDN5 RPL4 RPL36AL DDX5 H3F3A PABPC1 HSP90AB1 GAPDH CALM1 SERF2 EEF1D NPM1 HINT1 NAP1L1 ACTB YBX1 DDX17 ANXA1 ARPC2 GIMAP1 LDHB ZFAS1 ITM2B SEPT6 COX7C SSR3 ITGB1 FXYD5 CFL1 FTH1 EIF3E SYNE2 PTPRC GIMAP7 HLA-C PRRC2C RPS27L EEF2 AHNAK TPM3 CD55 PNRC1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X EIF1 RPL10 NFKBIA SRRM2 RSRC2 GIMAP7 RPS9 RPL6 NOP58 RPS13 SRRM1 RPL11 TPT1 ATF4 DDX5 CHD1 SFPQ H3F3A H3F3B RPL13A BIRC3 SRSF3 RPS12 RPS19 SERBP1 CYLD RPS7 RBM39 RPLP1 RPS27 PNN TAF7 ACIN1 GADD45B STK17A RPL36AL KMT2E HLA-B HIST1H4C SRSF7 EIF5 RBM8A DNAJA1 PRRC2C PNRC1 ARL6IP5 RPS3 CNBP RAB21 PPIG HNRNPDL NACA PIM3 RPS15 NAP1L1 PPIA RPL13 UBE2B NCL HSP90AB1 ZFAS1 PABPC1 DDX46 ARRDC2 AES RPL23A CCNL1 CXCR4 HNRNPA2B1 TLK1 ARID4A RPL37A MBNL1 RPL24 RPS29 EIF5A YWHAB STK17B RPL3 ARID4B IL32 SON PRPF38B HNRNPD EIF3F DDX6 CACYBP ARPC2 SNHG15 MORF4L1 RPL5 CDKN2AIP SAP18 RBM25 HNRNPA3 ATP5MG RPL39 RPS3A\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPL13 LTB HLA-B RPL13A RPL10 EIF1 RPS12 RPS14 RPL11 RPS19 PTMA RPL18A RPL28 RPS15 RPL36 RPS3A RPL3 RPS15A RPS7 RPL30 RPS6 RPL24 RPL14 HLA-A RPS27 RPL23 UBA52 RPL9 IL7R RPS13 PNRC1 RPL29 RPS3 EIF5B HLA-C ANXA1 RPL23A RPL39 RPL6 SERF2 RPL38 PRRC2C RPL27 RIPOR2 RPS23 H3F3B CALM1 IL32 PTPRC ACTB ATP5F1E YWHAB RPL5 HLA-E AES RPS29 HSP90AB1 RPL31 RPL37A HNRNPF SCAF11 ITM2B NCL SAMD9 HINT1 RPS21 RPS20 SLFN5 PNISR EMP3 RPS24 TMSB4X GIMAP7 RPS9 ARPC2 CDC42SE2 HSP90AA1 COX6B1 GBP5 PFDN5 SEPT7 SEPT6 CFL1 MYL12A EZR SNRPG VIM GIMAP4 NACA RPSA SUB1 TRAF3IP3 PSMA7 ARHGDIB CDV3 RPL10A TPM3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 TPT1 RPLP1 RPL10 RPS12 RPS19 RPL28 RPL13A RPS27 RPS6 RPS14 RPS3A RPL39 RPS23 RPS15A TMSB4X RPS15 RPL18A RPS3 RPL29 RPL11 RPL3 RPS13 RPL6 RPL37 RPL30 RPL23A RPL24 RPL14 RPL37A RPS21 RPS9 RPL5 RPS7 RPL10A RPL38 UBA52 RPSA RPL9 PFDN5 RPS24 RPS20 PTMA RPS29 RPL31 RPL36AL FTH1 NACA RPL36 NPM1 LTB RPL23 NEAT1 RPL4 RPL27 S100A6 PPIA ATP5F1E COX7C SARAF HLA-B IL7R HLA-A RPL22 EIF1 PSMA7 EEF1D RBM25 ACTB EEF2 HMGB1 EZR ZFAS1 CALM1 PABPC1 H3F3B HSP90AB1 NCL H3F3A HLA-C SRSF5 OST4 KRT1 IKZF1 XRN2 EMP3 RPS4Y1 PBRM1 CYBA SON HINT1 RPS27L PNRC1 IL32 LUC7L3 RBM39 SERP1 SAMD9 PTPRC\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPL13 TMSB4X RPS12 RPS19 RPL10 RPL13A RPS27 RPS14 RPL28 RPS15A RPS3A RPL30 RPL11 RPL37A RPS3 RPS23 RPL14 RPL37 RPS15 RPL18A RPL9 RPS6 IL7R PTMA RPS13 RPL39 RPL3 RPS24 HLA-B RPS9 ACTB RPL23 RPSA RPL29 RPS21 RPL23A RPL27 RPL5 UBA52 HNRNPA2B1 RPS7 RPL24 NACA RPL6 RPL31 LTB RPS29 RPL36 HLA-A IL32 RPS20 HSP90AB1 GBP4 NPM1 S100A6 RPL10A GIMAP7 BTF3 RPL22 HINT1 GAPDH NAP1L1 RPL36AL ENO1 UQCRB HLA-C UBB CALM1 TOMM7 EEF1D EMP3 SYNE2 PPIB PABPC1 EEF2 LCP1 SERF2 RPL38 VIM DDX5 PRDX1 FTH1 TPM3 PPIA ZFAS1 TCF7 GBP2 SON PTPRC SARAF CYBA HMGB1 COX6A1 SERBP1 UBXN1 PFDN5 PSME1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 RPL10 TPT1 RPS12 RPLP1 RPL13A RPS3A TMSB4X RPL11 RPL28 RPS27 RPS14 RPL30 RPS23 RPS6 RPS7 RPL18A RPL23A RPS3 RPL29 RPL3 RPS15A RPS19 RPL6 RPS9 RPS15 PTMA RPS24 RPL5 RPL37 RPL37A RPL9 RPL14 RPS13 LTB RPS20 RPL39 HLA-B RPSA RPS21 RPS29 RPL10A RPL24 ACTB NACA RPL31 RPL36 UBA52 RPL27 RPL4 RPL38 RPL23 IL32 HSP90AB1 CALM1 EEF1D EEF2 RPL22 NAP1L1 EIF1 PABPC1 PFDN5 NCL SARAF TOMM7 HLA-C IKZF3 LDHB YBX1 HLA-A EIF3E FTH1 PTPRC RBM39 GIMAP7 UQCRB SLC25A6 TMEM123 KIAA1551 H3F3B S100A6 H3F3A CD3D RNF213 DDX5 EIF3A BTF3 RIPOR2 SUB1 SEPT7 NOP53 COMMD6 FYB1 RSL24D1 RPS4Y1 ITGB1 SERF2 FAM107B PNRC1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 TPT1 RPS12 PTMA RPS19 HSP90AA1 RPL39 RPS3A RPS27 RPLP1 RPS6 RPL11 RPL37 EIF1 RPL30 UBB RPL13 RPL5 RPS3 RPL29 RPS23 SRSF7 HSP90AB1 RPL14 RPL28 RPS13 RPL24 RPS15 RPL31 RPS14 EZR RPL9 RPL18A SRSF3 FUS DNAJA1 RPS21 PABPC1 RPS7 TMSB4X TXNIP PNRC1 TLE4 RPL13A CXCR4 UBC TRA2B DDX5 PHF3 TSC22D3 RPS15A RPL38 RPL37A RPL23 RPL10A H3F3B ZC3H6 RPS24 DYNLL1 RPS29 RPL22 ARID4B CCNT2 RBM39 ESF1 CHORDC1 DDB1 RPS9 RPL3 RPL6 SRRM1 HMGB1 ELF1 SMAP2 SRSF5 FOS RPSA CITED2 HNRNPH1 HNRNPA3 RPL36 HSPA1B RPS20 KHDRBS1 KDM2A RPS4Y1 POLR3D SBDS AC087239.1 MDM1 SNHG15 C6ORF62 NSD3 RPL22L1 SBNO1 EEF2 RAD21 HLA-C KLF6\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPL13 RPLP1 RPS12 RPL10 RPS14 RPS27 RPS6 LTB RPL28 RPL13A RPL30 RPS3A RPS15A RPL18A RPL11 RPL39 PTMA RPS13 RPS19 RPS3 TMSB4X RPL5 RPL23 RPL29 RPL37 RPS24 RPS15 RPL14 RPS21 RPS7 RPL37A RPSA RPL3 RPS29 RPL6 RPL22 RPL10A RPL36 RPL23A RPL9 RPS9 RPL24 RPS20 RPS23 UBA52 RPL38 SLC25A6 VIM PABPC1 PFDN5 RPL31 RPL27 ACTB HINT1 FTH1 NACA SERF2 PTPRC HLA-B MYL12A SLC25A3 NPM1 RPL4 HSP90AB1 CALM1 NCL ARL4C TOMM7 SUMO2 S100A6 RPL36AL ATP5F1E ITM2B UQCRB ANP32B DDX5 CFL1 UBC EIF1 SYNE2 HLA-C CACYBP CD44 CDV3 RIPOR2 EIF3A NAP1L1 C9ORF78 HLA-A UBXN1 GIMAP4 CORO1A NDUFS5 HNRNPU EEF2 TRAT1 GIMAP7 CCNI\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 TPT1 RPL13 RPS12 RPL28 RPL30 RPS3A RPS14 RPS15A RPL18A RPL13A RPL29 RPL3 RPS19 RPL11 RPS23 RPS13 RPS3 TMSB4X RPL39 RPS6 RPS27 PTMA RPL37 RPL6 RPS7 RPS20 RPS24 RPL9 RPL5 RPS15 RPL14 RPL23 RPL36 UBA52 RPS21 RPL23A RPSA RPL37A HINT1 RPL10A RPS9 NACA GIMAP7 HLA-B RPS29 ANXA1 RPL24 RPL22 EEF1D S100A4 SARAF HSP90AB1 RPL31 RPL27 H3F3A RPL38 PTPRC ACTB ARPC2 FTH1 NPM1 ATP5F1E CFL1 IL32 LDHB SET IL7R CALR ITM2B EIF2S2 BTF3 HSP90AA1 SLC25A6 HLA-C YWHAB GIMAP4 CD3E HMGB1 PPIB C12ORF57 HLA-A EIF1 NUCKS1 GNAS RPL4 SMC3 PRRC2C EEF2 LDHA PRDX1 HNRNPA2B1 ARL4C PPIA LTB COX20 RPL36AL ARHGDIB\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 RPL10 RPLP1 TPT1 RPS12 RPS27 RPS14 RPS3A RPL11 RPL13A RPS15A RPL30 RPL28 RPS3 RPL39 RPS6 RPL37 RPS23 RPL3 TMSB4X RPS19 RPL18A RPL9 RPL23 RPS15 PTMA RPS13 RPL14 RPL29 RPL37A RPS9 RPS21 RPS29 RPS20 RPL23A RPL5 VIM RPL22 RPS24 RPL36 ACTB IL7R RPL27 RPL6 RPL10A RPS7 UBA52 RPL38 HLA-B RPSA S100A11 RPL24 IL32 LTB NCL HINT1 RPL31 S100A6 NACA HSP90AA1 HLA-C SERF2 HSP90AB1 PPIA ARL4C NPM1 S100A4 HLA-A MYL12A RPL4 CFL1 YBX1 FTH1 ATP5F1E H3F3B PFDN5 GAPDH SUB1 LDHB SNRPD2 TPM3 H3F3A PSMA7 EEF1D ITGB1 CD2 SLC25A6 ARL6IP5 PPIB NOSIP HLA-E DDX5 ARPC2 COX7C EMP3 BTF3 TOMM7 GIMAP4 SRRM2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 RPL13 RPS12 TPT1 RPL28 RPS14 RPS3A RPS3 RPL11 RPS27 RPS23 RPS6 RPS19 RPL18A RPL37 RPS15A RPL3 TMSB4X RPL39 RPL14 LTB RPL30 IL7R RPL13A RPSA RPL6 RPS7 RPS13 RPL9 RPL10A PTMA RPL37A RPS21 RPS9 RPL23A RPS15 RPL36 RPS24 UBA52 RPL29 NACA RPL5 RPL23 RPS29 HLA-B RPL24 RPL27 RPL38 S100A4 RPS20 RPL22 HLA-A HLA-C ACTB CALM1 VIM RPL4 RPL31 S100A6 LDHB NPM1 PDCD4 TOMM7 S100A11 HINT1 SLC25A6 GIMAP7 ITM2B GBP5 UQCRB PNISR PTPRC BTF3 PFDN5 IL32 MYL12A S100A10 GAPDH RPS4Y1 FTH1 EMP3 UXT HLA-E RPL36AL EEF2 PPIA MYL12B NAP1L1 HSP90AA1 IKZF1 EEF1D ATP5F1E CD2 AQP3 CD3G COX7C SERF2 SNHG8\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPLP1 RPL10 RPS12 RPL13 RPS27 RPL30 RPL13A RPS14 RPL18A RPL11 RPS19 RPL28 RPS23 RPS3 RPS6 RPS3A RPL3 RPS20 RPS13 RPS15A TMSB4X RPS15 RPL9 RPL39 RPS9 RPL5 RPL29 RPS29 RPS21 RPL6 RPL23A RPL14 UBA52 RPL37 RPL10A RPS24 RPS7 RPL37A RPL38 RPSA RPL23 SARAF RPL31 EIF1 PABPC1 RPL24 PTMA RPL36 RPL27 RPL4 NAP1L1 ANXA1 COX7C GIMAP7 RPL22 NACA EEF2 PASK RPL36AL TOMM7 S100A6 LDHB ACTB FTH1 HLA-A IKZF1 HLA-E NEAT1 SYNE2 HLA-B PTPRC N4BP2L2 LTB HLA-C DDX5 HSP90AB1 PNISR SEPT7 GIMAP4 AES OST4 RPS4Y1 NPM1 BTF3 YWHAB SCAF11 PNRC1 CORO1A VIM LEPROTL1 CCNI ITM2B CALM1 EIF3K PFDN5 ATP5MG EEF1D ANP32B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPL13 RPS12 RPLP1 RPL10 RPL30 RPS14 RPL28 RPS3A RPS3 RPS27 RPS15A RPS23 RPS6 RPL3 RPL11 TMSB4X RPL13A RPL9 RPL14 RPS13 RPL6 RPS19 RPL37A RPL18A RPS7 RPL39 RPS29 RPL29 RPS20 RPL37 RPL36 RPL27 LTB RPL23A RPL10A PTMA RPL5 RPS24 RPL23 RPS9 RPL24 RPS21 RPS15 UBA52 RPSA RPL38 NACA PABPC1 PSME1 RPL22 PTPRC EIF1 EEF1D RPL31 MYL12A GIMAP7 ITGA4 PNRC1 HLA-B RPL4 DDX18 HSP90AA1 NPM1 S100A6 BTF3 ATP5F1E HINT1 GNAS COX7C NOP53 EEF2 EIF3E NAP1L1 GMFG HSP90AB1 VIM HMGB1 HNRNPU AKAP13 YBX1 C12ORF57 FTH1 SARAF PSMB9 DDX24 SYNE2 SLC25A6 PPIA HLA-C PFDN5 HNRNPA2B1 KLF3 IKZF1 ATP5MC2 TRIM38 ATP5MG RPL36AL ISG20\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPL10 RPS12 RPL13 LTB RPS14 RPLP1 RPL28 RPS27 RPL30 RPS3 RPL3 TMSB4X RPL13A RPL11 RPS3A RPS23 RPL23A RPL18A RPS19 RPS24 RPS15A RPL14 RPS21 RPL29 RPS9 RPL39 PTMA RPS13 RPS6 VIM RPS15 S100A4 RPL37 HSP90AB1 HLA-B RPL36 RPS20 IL32 RPL9 RPL27 RPS29 RPL24 RPS7 RPL23 S100A6 RPSA RPL5 CALM1 GBP5 RPL38 RPL10A S100A11 HSP90AA1 UBA52 RPL22 RPL37A HLA-C EIF1 GIMAP7 ACTB NACA GAPDH RPL6 IL7R PTPRC ITGB1 EMP3 RPL31 HLA-A ATP5F1E S100A10 ITM2B NEAT1 ENO1 H3F3A ANXA1 SUB1 CFL1 PRDX1 TPM3 NPM1 PPIA BTF3 HNRNPA2B1 CD3D MYL12A COX6B1 VAMP8 GIMAP4 STAT1 NCL USP10 PSMB9 PRRC2C CHCHD2 RAN SYNE2 COX7C\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPL13 RPS12 RPLP1 RPL10 RPS14 RPL30 RPS27 RPS23 RPS3A RPL13A RPL28 RPS15A RPL11 RPS19 RPS3 RPL3 RPS15 RPL29 RPL18A RPS6 TMSB4X RPL39 RPL9 RPS13 RPS9 RPL37 RPL6 RPL14 RPL5 RPL23A RPSA RPS7 RPS20 PTMA UBA52 RPL37A RPS21 RPL27 RPL36 NACA RPL22 RPS29 RPL38 RPL31 RPS24 RPL23 RPL10A SMCHD1 RPL24 LTB HLA-B PABPC1 PTPRC SARAF ITM2B PFDN5 YBX1 RPL4 STAT1 PNRC1 FYB1 IKZF1 IL7R FTH1 IL32 PPP2R5C NEAT1 HLA-C LPIN2 ACTB HNRNPA2B1 GAPDH DEK YWHAB HSP90AA1 HLA-A H3F3A TRAF3IP3 ATP6V1G1 TXNIP MX1 SLFN5 HLA-E BTF3 GIMAP7 EIF1 USP15 DDX17 STK4 DNAJA1 CALM1 GNAS PCBP2 SAMD9 PIK3IP1 CFL1 HSP90AB1 ZFAS1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 TMSB4X FTH1 RPS27 EIF1 RPL10 HNRNPA3 DDIT4 CXCR4 RPL13 SNHG15 DDX5 SRGN H3F3B HSPA5 HSP90AB1 SMCHD1 ARL4C SLC2A3 CHD1 GOLGB1 PTMA RPL23A RPL11 ZEB1 SF3B1 RPL39 RPL28 NFKBIA JOSD1 SRRM2 HNRNPD PNN HMGB1 RSRC2 SRSF3 YPEL5 RPS6KB1 RPS14 RBM39 DHX36 RPS6 CD69 SNRPG STAT3 ZNF331 EIF4A2 RPL30 EIF5 EPC1 UBC GPBP1 CDKN1B PABPC1 RPLP1 PNRC1 SRSF5 RPS24 RPL36 RPL13A RPL29 ARID5B NUP50 PIK3R1 PSMA5 ARID4B RPL9 RPL37 KDM4B PPIA POLR2D BTF3 KIF5B CREBRF SON NR4A2 RNF20 RPS20 RPL31 IWS1 KPNA2 RPS15A SRSF11 RPL7L1 USP7 CCNL1 DNAJA2 RBM25 EIF3A PDIA3 BZW1 COPS2 PRPF38B ATP5MG ATF4 MAPRE1 TCTE3 RPS21 PIAS2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 RPLP1 TPT1 RPL13 RPS12 RPS27 RPS14 RPL39 RPL28 RPL30 RPS19 RPS15A RPS3A RPL3 RPS23 RPS3 RPL18A TMSB4X RPS6 RPL11 RPS13 RPL23A RPL14 RPL13A RPL29 RPL9 RPS15 RPS9 RPL5 PABPC1 RPS21 RPL36 RPS29 RPS24 RPS7 PTMA VIM RPL6 RPL10A NACA RPSA UBA52 RPL24 RPL37A RPL38 RPL27 RPL37 RPL22 EEF2 IL32 RPS20 RPL31 GAPDH GIMAP7 CD8B S100A11 HLA-C BTF3 PFDN5 UBC SARAF RPL4 ANXA1 EEF1D S100A6 H3F3B HSP90AA1 IL7R HINT1 RPL23 FTH1 CALM1 PTPRC CYBA NCL CXCR4 LTB RPS4Y1 S100A10 CFL1 RPL36AL EIF1 ARID5B HLA-E UQCRB ACTB IFI16 ITGB1 COX7C PPIA PSME1 HLA-B ISG20 C12ORF57 HLA-A HNRNPA2B1 DDX5 ZFAS1 S100A4\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPLP1 RPL13 RPS14 LTB RPS12 RPL10 RPL28 TMSB4X RPL13A RPS3 RPL30 RPS19 RPS3A RPS27 RPS15A RPS23 RPL29 RPS6 RPL39 PTMA RPS24 RPL37 RPL3 RPL23A RPL11 RPS7 RPL18A RPL14 RPL6 RPS15 RPL5 RPS9 RPS13 RPS20 S100A4 RPL10A UBA52 RPL24 RPL9 ACTB NACA RPS21 IL32 RPL36 HSP90AB1 RPSA RPL23 VIM RPL27 RPS29 FTH1 SERF2 HSP90AA1 HINT1 EIF1 RPL31 RPL38 HLA-B SYNE2 RPL22 RPL37A S100A6 SLC25A6 NAP1L1 RPL36AL GIMAP4 COX7A2 CD2 S100A10 PTGES3 PTPRC GAPDH BTF3 PPIA HLA-C ITGB1 ATP5F1E NDUFB2 YBX1 H3F3A COX7C ATP5MG CFL1 EEF1D HNRNPA2B1 GIMAP7 EEF2 AES HSPD1 FXYD5 HNRNPC NPM1 RPS27L EMP3 PSME1 KMT2E ARPC2 SEPT7\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 TPT1 RPL13 TMSB4X RPS19 RPL18A RPL28 RPL6 RPS3A RPS27 RPS3 RPS23 RPS7 RPS14 RPL30 RPL3 RPL11 RPL37 RPL14 RPL13A RPL23A RPL10 RPL9 HLA-B LTB RPS6 RPS15A RPS13 RPL22 RPS21 RPS20 RPL23 RPS29 FTH1 GAPDH ITM2B UBA52 IKZF1 RPL39 RPL5 RPS9 RPL29 PTPRC RPL37A PTMA TRIR FYTTD1 HINT1 RPL38 RPL31 RPL24 RPL36 HLA-A EIF1 DDX24 IL7R CALM1 RPSA RPL27 LDHB NEAT1 EIF4B DDX5 FYB1 EMP3 RPS24 ATP6V1G1 HNRNPA2B1 HLA-C KTN1 TAF1D ENO1 CLEC2D HLA-E TPR SEPT7 PNISR CASP8 CFL1 MYL12A COX6B1 ATP5MF OCIAD2 UQCRB HNRNPA3 HSP90AA1 LDHA ETS1 JAK1 NACA PNRC1 TCF7 BTF3 H3F3A FAM107B MRPS6 PPIA RABAC1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPLP1 RPS12 RPL13 RPL10 TMSB4X RPL28 RPS19 RPS14 RPS27 RPS3A RPS3 RPL3 RPS15A RPS6 RPL30 RPL18A RPS13 RPS23 IL7R RPL13A RPS7 RPL39 RPL9 PTMA S100A4 RPL37 RPL11 RPL29 RPS24 RPS15 HLA-B RPL14 RPL5 RPS9 RPL23A RPS20 RPL6 RPS21 PTPRC IL32 ACTB RPSA GIMAP7 RPL36 RPL23 RPL10A RPL27 RPS29 IFITM2 LTB HMGB1 EMP3 RPL24 HLA-E UBA52 NEAT1 PFDN5 RPL31 EIF1 TAGLN2 GBP5 NACA GIMAP4 LDHB GBP4 HLA-A CD53 SARAF RPL37A ANXA1 RPL22 MYL12A UQCRB ATP5F1E EEF1D ARL4C S100A6 SERF2 S100A10 BIRC3 GAPDH RPL36AL RPL38 PNRC1 PRRC2C ATP5MG HLA-C CFL1 PSME1 RAC2 CD3D RPS4Y1 CALM1 HSP90B1 LPIN2 DDX17 SYNE2 MAGOH\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS14 RPL13 RPS12 TPT1 RPL10 RPS19 RPS27 IL7R RPL13A RPS3 RPL11 RPL30 RPS3A RPS15A RPL28 FTH1 RPS6 RPL3 RPL39 RPL37 TMSB4X RPS23 RPL9 RPL23A RPL29 RPS7 RPL14 RPL37A RPL5 RPL6 RPS15 RPS9 RPS24 RPS20 RPS29 RPL31 RPL18A RPL36 RPS21 RPL27 PTPRC RPS13 RPL10A HLA-B UBA52 RPL23 NACA RPSA RPL38 HLA-A EEF1D BTF3 H3F3A S100A10 PFDN5 GAPDH PABPC1 PTMA GIMAP7 TXNIP PAK2 YWHAB RPL24 CAST EML4 HMGB1 HINT1 S100A4 CD3E RPL36AL HNRNPU HSP90AA1 SMCHD1 TOMM7 PASK EPB41 HLA-C RPL22 DDX17 NEAT1 ARGLU1 EIF4A2 CNOT6L CXCR4 CALM1 UQCRB MSN UBC FXYD5 SCAF11 PAIP2 PRRC2C HSP90AB1 TCF7 NFYB MBNL1 SLC25A3 COX7A2L\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPL13 TPT1 RPL28 RPLP1 RPL10 RPS19 RPS12 RPS27 RPS3A RPS14 RPS15A IL32 ACTB RPS3 RPS23 RPL3 RPL30 PTMA LTB RPL29 RPL9 RPL18A RPL13A HLA-B RPS6 RPS24 RPL37 RPL11 RPL39 RPS21 RPS13 RPL23A RPL10A RPS15 RPL14 TNFRSF4 HLA-A RPL6 HSP90AB1 HSP90AA1 RPS20 RPS7 RPL24 RPS29 FTH1 GAPDH RPL5 RPL22 RPSA RPL36 FKBP2 ATP5F1E RPL38 EIF1 S100A4 PFDN5 SERF2 CFL1 UBA52 RPL37A RPL31 RPL23 RPL27 MYL12A HNRNPA2B1 PTPRC GZMA NACA EEF1D HLA-C PPIB ANXA1 ARPC2 HNRNPU CYBA CALM1 RPS9 COMMD6 RPL36AL NOP53 RPS27L CD3D RPL4 SEC61G COX6C LRRFIP1 YWHAB SERP1 EMP3 IKZF1 NPM1 CAST S100A6 BTF3 SYNE2 CORO1A COX7A2 NAP1L1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 GADD45B TMSB4X EIF1 UBC DDIT4 NFKBIA RPS15 PTMA RPL30 RPS27 RPS7 H3F3B EIF5 RPS13 SRGN RPL3 RPL24 HNRNPA2B1 PIM3 RPL6 RPL39 RPL14 JUND RPL37A RPL36 RPL10 RPL37 RPL9 PNRC1 RPL23A FTH1 RPS9 CD69 RPS6 HLA-B HINT1 RPL13 UBB SET PABPC1 RPS15A RPS14 SON RPL18A PSMA7 RPL11 RPS12 EIF3E RPL13A GNAS EIF4A2 BTF3 CFL1 CREM UBE2D3 ITM2A ACTB TAF1D TPT1 HNRNPH1 RPL23 SAP18 RBM8A HLA-A CDC42SE2 RPL22 RPL29 TOP1 REL PPIG UBA52 RPL5 YBX1 DDX24 HNRNPA0 RPL28 RPS23 BZW1 SQSTM1 RPS19 FAM177A1 NDUFS5 CLEC2B CCNL1 MED10 NACA SUCLG1 VAPA STK17B PSMB3 SERF2 RPL36AL HSP90AB1 CYCS RSF1 RBMX DDX5 YY1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 RPL13 TPT1 RPLP1 RPS12 RPS14 RPS27 RPL30 RPL28 RPL13A RPS3A RPS6 RPS15A RPS3 RPL11 RPS23 RPL9 RPL18A RPL29 RPL39 RPL14 RPL3 RPS19 RPS21 RPS15 RPS13 RPL37 LTB RPS20 TMSB4X RPL37A RPL23A RPL36 RPL23 PTMA RPL5 RPL24 RPS7 RPL6 RPL10A VIM RPS24 UBA52 RPL22 RPL27 RPS9 RPS29 PABPC1 RPSA RPL31 RPL38 ACTB NACA RPL4 HLA-B IL32 EEF1D GIMAP4 NPM1 FXYD5 NAP1L1 RPL36AL TOMM7 HINT1 HLA-C PRRC2C GAPDH PTPRC CALM1 HLA-A BTF3 S100A6 GIMAP7 HNRNPA2B1 CFL1 HSP90AA1 SERF2 CAST NEAT1 ATP5F1E GNAS FTH1 ARL6IP5 LDHB UQCRB RPS4Y1 HSP90AB1 COX7C S100A11 EIF1 DDX46 EIF3E COMMD6 IKZF1 PFDN5 SET CD48 EEF2 CD3D\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 RPL13 TPT1 FTH1 RPS12 RPL28 RPL13A RPS3 RPS6 RPS19 RPS14 RPL29 TMSB4X RPS3A RPL23A RPL11 RPS27 RPL18A RPL37 RPL3 RPS21 RPS13 RPL30 RPL10A RPS23 RPS15 RPL37A RPL31 RPL39 RPL36 RPS15A RPL9 RPL14 RPS24 RPS9 RPS29 RPL5 RPL6 RPL24 RPS20 RPS7 RPSA RPL23 ATP5F1E RPL27 HLA-A NACA UBA52 IL32 PABPC1 PTMA PTPRC RPL22 RPL38 HLA-B NR3C1 COX7C EIF1 S100A11 SRGN HLA-C NAP1L1 CD3G HNRNPF EEF2 CALM1 PFDN5 PIK3R1 NPM1 ITM2B RPL4 GIMAP7 MRPS5 TOMM7 SARAF HINT1 CYSLTR1 RPS4Y1 ACTB TAF10 EEF1D S100A6 SERP1 FAM107B STK17A RAN BTF3 VIM NOP53 MBP RGCC LTB ARPC2 CDKN1B CBX5 UBE2B EIF3A DDX24\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TMSB4X TPT1 RPL13 LTB PTMA RPL10 S100A4 VIM RPS14 RPS19 IL32 RPL28 RPS12 HLA-B RPS3 RPS23 RPL30 RPL11 RPL18A S100A10 RPL13A RPS15 S100A6 IL7R RPS24 RPL37 RPL3 RPS27 CALM1 RPL29 RPL14 RPS6 RPS3A RPL9 RPL10A RPS7 HLA-A RPSA RPL23A RPS13 YBX1 RPL27 RPL39 RPS20 RPS15A RPS29 ENO1 RPL23 RPL37A IFITM2 RPS21 TPM3 RPL5 RPL6 RPL24 CFL1 PTPRC HSP90AB1 UBA52 HINT1 RPS9 ITGB1 RPL38 S100A11 CALR HLA-C RPL22 LDHA RPL4 RPL31 GAPDH NACA ACTB HMGB1 RPL36 ARPC2 TAGLN2 ATP5F1E NCL NEAT1 SERF2 FLNA LRRFIP1 LCP1 H3F3A MSN RABAC1 BIRC3 CD3D HSPA5 PTGES3 AHNAK NPM1 FTH1 DNAJC8 RPS4Y1 LDHB ELOB\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 TPT1 RPS12 TMSB4X RPL10 RPL28 RPL13A RPS14 RPS27 RPS3A RPL30 RPS6 RPS19 ACTB PTMA RPL39 RPS3 RPL3 RPL18A RPL11 RPS23 RPL37A RPL5 RPL6 RPL37 RPS24 LTB RPS20 RPS15A RPL23A IL32 RPS15 RPL29 RPL4 HLA-B RPL14 RPL36 HSP90AB1 NACA RPL9 RPL23 S100A6 RPS21 RPS29 RPSA UBA52 RPS13 S100A4 RPS7 RPL31 HINT1 RPL38 RPS9 RPL10A RPL22 STAT1 RPL27 RPL24 NCL HLA-C GIMAP7 HLA-A MSN HNRNPA2B1 CORO1A RPL36AL PTPRC NAP1L1 EEF2 HSP90AA1 H3F3A CFL1 GAPDH ITGB1 PRRC2C HNRNPU SUB1 CD2 TOMM7 NPM1 HNRNPR PPIA TMEM50A VIM HMGB1 EEF1D YBX1 CDC42 CHCHD2 LCP1 GBP4 PPIB C1QBP CCDC168 OST4 ARPC2 TNFSF10 LDHA\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD4+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: TPT1 RPS12 RPLP1 RPL10 RPL13 TMSB4X RPL28 RPS3A MALAT1 RPL18A RPS19 RPS14 RPL11 RPS27 RPS3 RPL30 RPS15A RPS6 RPL14 RPL3 RPL29 RPL39 RPS23 RPL37 RPS13 RPL13A RPS9 RPL6 RPL37A RPS15 RPS7 RPL36 RPL10A RPL9 S100A6 RPL23A RPS21 RPL5 S100A4 RPS29 RPS20 NACA RPSA RPL24 RPL27 HLA-B IL7R ACTB RPS24 UBA52 VIM LTB RPL38 BTF3 RPL31 PFDN5 RPL23 EEF2 HINT1 PPIA RPL22 ITM2B S100A10 HLA-A ATP5F1E GAPDH UQCRB ARPC2 RPL4 PTPRC RPL36AL CALM1 SARAF EMP3 LDHB GTF3A HSP90AA1 EIF3F NAP1L1 PTMA RSL1D1 COMMD6 PABPC1 SERF2 PSMA7 C12ORF57 HLA-C CORO1A NOP53 SUMO2 EEF1D RIPOR2 RBM25 HMGB1 FTH1 ARL4C SERBP1 CD3G EIF3E H3F3B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 RPS15A RPS12 RPS27 RPS3 TPT1 TMSB4X RPS19 RPLP1 RPS3A RPS14 RPL30 RPL14 RPL10 RPL28 RPS23 RPL23A IL7R HLA-A PTMA RPL13A RPL3 RPS15 RPL37 RPS7 RPL11 RPL18A RPS6 RPL24 GNLY UBA52 RPL29 RPS13 RPS29 PTPRC HLA-B RPL6 IL32 NKG7 RPS24 RPL38 RPS21 RPL27 RPL39 RPL37A RPL36AL PYHIN1 GIMAP7 NACA CALM1 CD8B RPL36 RPL9 CST7 GIMAP4 TNRC6B RPL10A KIAA1551 KLRD1 RPS20 ITM2B PFDN5 PPP2R5C S1PR4 NEAT1 PARP8 EMB CD2 RPL5 FGFBP2 HLA-C SUMO2 RARRES3 HMGN1 RPS9 MYL12B CARD16 CXCR4 SLFN5 CYBA FTH1 KMT2C STK4 EEF1D APMAP CEP104 CELF2 DDX5 RAP1B FYN UBC GPR137B DENR ZBTB7A PSMA4 COMMD6 CD3D FNBP1 CD3G\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS12 RPL13 RPS14 RPL10 RPLP1 RPL3 RPS3 TPT1 RPS27 TMSB4X RPL30 IL7R PTPRC RPL13A RPL28 RPS3A RPS19 RPS6 PTMA RPS15 RPL11 RPL18A RPL14 HLA-B HLA-A RPS15A RPL37 RPS21 RPL6 RPS29 RPL23A RPL24 RPS24 RPS23 GIMAP7 RPS13 RPS7 GAPDH RPL39 RPSA RPL5 HMGB1 SEPT7 PFDN5 ITM2B EEF1D ACTB RPL27 RPL9 UBA52 RPL36 RPL37A CMC1 RPL23 BTF3 RPL10A HLA-C PSMA7 RPL31 RPL4 HINT1 PYHIN1 ZRANB2 RPS9 TRIR H3F3B KIAA1551 CALM1 CD3E SRSF10 IKZF1 PNRC1 DDX5 IFI16 IL32 TOMM7 SCAF11 ATP5F1E DDX17 FTH1 RHOA RPS20 TRGC2 TPM3 COX8A COX7C ATP5MC3 ARPC2 YBX1 USP34 SEPT6 NEAT1 COPB1 PIK3R1 TIGIT NPM1 RTF1 RSRP1 UBE2D3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 TPT1 RPL13 RPS12 RPLP1 RPL28 TMSB4X RPS14 RPS24 RPL30 RPL3 IL7R RPS27 RPS3 RPL18A RPS23 PTMA RPS3A RPS15A RPS19 RPL13A RPL39 RPL11 RPL37 S100A4 RPS9 RPL29 VIM RPS15 RPS6 RPL14 LTB RPL10A IL32 RPL23A RPS7 RPSA UBA52 HLA-B RPL37A RPS21 RPS13 RPL24 RPL6 RPL9 RPS20 RPL5 S100A6 RPS29 RPL36 GAPDH RPL27 NACA RPL23 HINT1 RPL22 LYAR EIF1 BTF3 EEF2 PPIA LDHB GIMAP7 RPL31 ATP5F1E HLA-C ITM2B RPL38 MT2A SERF2 CD48 AES ARHGDIB EIF3K S100A10 FXYD5 TXNIP HSP90AB1 H3F3A PABPC1 NPM1 ATP6V1G1 EEF1D ARPC2 POLR2L COTL1 HLA-A ROCK1 PSME1 ANXA1 CD8B ARID4B COX7C CALM1 DNAJC8 EIF3E MYL12B TOMM7 NDUFA12\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPL13 RPLP1 TPT1 RPS12 RPL10 RPS15A RPS14 RPS27 HLA-B RPL28 RPL30 RPS3 RPL13A RPS19 GZMA PTMA PTPRC RPL11 RPL14 RPS3A RPL6 RPL39 RPL10A RPL37A RPL3 UBA52 RPL36 ARPC2 RPS13 RPL29 CALM1 HLA-A RPL18A SEPT7 S100A6 PFDN5 KIAA1551 RPS15 RPL37 RPL5 CFL1 IL7R PNRC1 RPS7 RPS20 CST7 BIRC3 SYNE2 RPL9 PARP1 DDX17 ATP5F1E NEAT1 TANK TAX1BP1 NCL RPS21 SSB ACTB RPS6 CD3E CYBA STK4 NSRP1 RAP1B NCOR1 OST4 MYL12A SRPRA ZBTB7A ATP6V1G1 PLEKHA3 GAPDH RPS4Y1 PSME1 CXCR4 DOCK8 ARL6IP5 R3HDM2 H3F3A PARP14 FYN N4BP2L2 RPSA PBXIP1 WAC RPS9 RPL23A SLC38A1 PIK3R1 PARP8 RPL27 ANXA1 HLA-C AKAP13 KLRD1 CD3D VIM\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPS27 RPLP1 HLA-B RPS12 RPL13 RPL28 RPS14 RPL10 HLA-A ACTB RPL30 RPL13A RPS6 RPS19 RPS15A TPT1 RPS3A RPL37 RPS13 RPS3 IL32 FTH1 RPL23A RPL3 RPS7 RPL14 ITM2B RPS24 RPS23 RPL36AL CST7 RPL36 NEAT1 DDX5 RPS15 RPS21 CD2 STK17A GIMAP4 RPL23 RPL39 RPL5 RPL18A FYB1 RPL11 HLA-E SYNE2 HLA-C RPL6 HNRNPA2B1 UBA52 RPS20 S100A6 CMC1 NACA SLFN5 RPL38 SERF2 EMP3 RPL9 CYBA MYL12A GSTK1 CLEC2D OPTN RPS9 RSRP1 HNRNPC RPL4 COX7C GBP2 SAMD9 HSP90AB1 VIM DRAP1 PTMA RPL37A SMCHD1 IKZF1 RILPL2 S100A11 RPL29 ATRX GIMAP7 HNRNPK PRDM2 S100A4 DOCK8 RARRES3 RPS4Y1 RPSA ARL6IP5 MX1 PARP14 IRF2 TPRG1 NFKBIA TPM3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 RPLP1 TPT1 RPS19 RPS27 TMSB4X RPL13 RPS3 RPL28 HLA-B RPS14 RPS12 RPS23 RPS3A RPL11 RPS6 RPL3 RPS15A HMGB1 RPS13 CFL1 RPL6 RPL30 RPS7 RPS24 RPL23A PTPRC RPL14 CST7 RPL37 ARL4C GAPDH PTMA RPL13A RPS9 HLA-A RPL39 RPS15 RPS29 RPL9 RPL18A RPL37A HNRNPA3 CYBA MACF1 PFDN5 RPL27 BOD1L1 SET SEPT7 NACA RPL24 RPS20 DDX5 UBA52 IL32 HNRNPA2B1 RPL10A H3F3A HLA-C ACTB RNF213 RPL38 GNB5 SERF2 MSN CXCR4 SUB1 SNU13 PNRC1 KANSL1 S100A6 AC245297.3 HSP90B1 KLRD1 KTN1 UQCRB EIF1 MBP USF2 PNN PIK3R1 ARPC2 VIM EML4 SPTAN1 CD2 YY1 HNRNPU RAD21 NCL RPSA DNAJA1 UBC NDUFA4 BTF3 MRPS25 ATP5F1E PYHIN1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 IL7R TPT1 RPLP1 RPS12 RPS3 PTMA RPS23 GNLY RPL10 RPL13 RPL30 TMSB4X RPL13A RPS14 RPL3 RPL28 RPL37 HLA-B RPS19 RPS27 RPL11 RPS15A RPL18A RPS3A RPL29 RPS15 HLA-A RPS9 RPL5 RPL27 RPS13 RPL23A RPL39 RPS24 RPL14 UBA52 RPL6 SPOCK2 RPS6 RPL31 FTH1 NEAT1 NKG7 RPL36AL HLA-E RPL9 RPS7 UBC RPL22 RPL37A HLA-C RPL10A ARL6IP5 RPL24 BTF3 MYL12B CLDND1 EEF1D NACA HMGB1 PFDN5 SEPT7 H3F3A HLA-F GMFG NCL RPL38 LTB SAMSN1 LAPTM5 CXCR4 HINT1 PTPRC CNOT6L SARAF RPS20 CD3D HSP90AB1 ACTR2 ARGLU1 LYAR GNAS ESF1 RPS29 S100A11 EIF1 EML4 PPP2R5C PDCD4 IKZF1 TNFAIP8 PPIG ITM2B RPL23 SRRM2 DDX5 CD247 GAPDH MTDH\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPL13 RPLP1 RPS12 RPL10 RPL28 RPS14 RPL13A RPS3A TMSB4X RPS23 RPS27 RPL11 RPS15 RPL14 RPL18A RPS6 RPL3 RPL30 RPS3 RPL23A RPL39 RPS15A IL7R RPS19 RPL37 RPL6 RPS13 RPL9 RPS7 RPL5 RPS21 UBA52 RPS24 VIM RPS29 HLA-B S100A6 NEAT1 RPSA RPL24 RPS9 RPL37A S100A4 ACTB RPS20 RPL23 RPL29 RPL10A FTH1 RPL27 RPL22 RPL36 NAP1L1 PTPRC RPL31 LTB GIMAP7 HLA-A S100A10 NACA CD3D RPL38 ANXA1 PTMA EIF1 LDHB CYBA CXCR4 CALM1 PABPC1 HLA-C PSMA7 EEF1D GBP1 STAT1 EEF2 IL32 KLF6 CAST ITGB1 AES ITM2B NOP53 KTN1 BTF3 HMGB1 SERF2 BIRC3 JUND PFDN5 KLRD1 HINT1 EZR YWHAZ MYL12A RPL36AL SARAF ATP5F1E\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPLP1 TPT1 RPS27 RPS3 RPL28 RPS14 RPS15A RPS19 RPL10 RPS12 RPL30 RPL13 RPS3A RPS23 RPL3 RPL18A RPL39 PTMA HLA-B PTPRC RPL14 RPL6 HLA-A RPL29 CST7 RPS29 RPS21 RPS24 NKG7 RPS15 RPL11 IL7R UBC RPL13A GAPDH RPL23A VIM CYBA RPL23 RPL36 HMGB1 IL32 S100A6 FTH1 RPS9 UBA52 YBX1 RPL37A CXCR4 SERF2 RPL9 HLA-C RPS6 CALM1 RPS13 EEF1D SMCHD1 CMC1 SREK1IP1 NEAT1 SKIL EIF1 PABPC1 EZR PNRC1 PNISR AES GIMAP7 JUND ITM2B ICE1 RAC1 NACA HSP90AA1 RPL5 TPM3 ATP5MG RPS7 MYL12B RIF1 LCP1 RPL24 ATP6V1G1 CDC42SE2 HNRNPA2B1 RPL22 RPS20 CFL1 ACTR2 BPTF MTRF1L MSN MORF4L1 GZMA EMP3 TOMM7 ATP2B4 YWHAB\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPS12 RPL13 RPS14 TMSB4X RPS19 RPL10 RPS3 RPS3A RPS27 RPL30 RPL3 RPL39 RPL28 RPS23 IL7R RPL18A RPL11 RPS6 RPL37 RPS13 ACTB RPS15A RPS7 RPL13A RPS21 RPL29 HLA-B RPL37A RPL6 RPL9 FTH1 NACA RPS29 LTB RPL24 RPL14 RPS9 UBA52 RPS15 PTMA RPS24 HLA-A RPL23A RPL10A S100A4 PNRC1 CD2 S100A6 RPS20 PTPRC CALM1 S100A11 ITM2B PFDN5 RPL36 RPL36AL RPL5 BTF3 RPL23 S100A10 SERF2 DDX17 VIM RPL31 RPSA H3F3A COX7C FYN YWHAB CD3D SEPT7 RPL38 RPL27 EIF1 HNRNPA2B1 HLA-E EIF3K RPL22 SEPT6 RABAC1 NAP1L1 H3F3B TOMM20 CAMK4 RPS4Y1 GRAP2 CYBA NFKBIA GIMAP4 NOP53 ARL4C PABPC1 MYL12A TOMM7 EMP3 ARHGDIB IL32\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X TPT1 RPL10 RPLP1 RPS12 RPL28 RPL13 RPS27 RPS19 RPL30 RPS23 RPL11 RPS15A RPS3A RPS3 RPS14 RPL39 IL7R RPS21 VIM RPL3 RPS15 RPL14 RPL13A RPS20 RPS7 S100A4 PTMA S100A6 RPS24 RPL23A RPS13 RPL5 RPS6 HLA-B RPS9 RPL36 RPL9 RPL18A RPL23 RPL29 RPL6 RPS29 RPL22 IL32 RPSA YBX1 RPL37 S100A10 RPL37A ATP5F1E UBA52 PTPRC CAST HNRNPA2B1 HLA-C LDHB NEAT1 CALM1 IKZF1 RPL10A LGALS3 RPL31 NPM1 HINT1 PFDN5 RPL38 HLA-A LTB SON HSP90AA1 NACA ITGA4 YWHAB GAPDH FAM107B BCL2 RPL36AL SYNE2 EIF5B ARPC2 RPL27 EIF1 SUMO3 ITM2B LRRFIP1 ARL4C RWDD1 NDUFA4 UBC MYL12B TAGLN2 FTH1 RPL4 AHNAK TXN HSP90AB1 TXNIP ANXA1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL10 RPLP1 TMSB4X TPT1 RPS12 RPL13 RPS14 RPS3 RPS23 RPL28 RPS27 RPL30 RPL13A RPS15A RPL18A RPS6 RPS19 RPL3 RPS3A RPL14 RPL11 RPSA UBA52 RPS21 RPL39 RPL23A PTMA RPL29 VIM RPS24 RPL6 RPS7 RPS13 RPL22 RPS15 RPL37 HLA-A RPL37A IL32 MRPS6 RPL5 PTPRC NACA RPS29 GAPDH ACTB RPL36 EEF1D IL7R RPS20 RPL27 PFDN5 DDX5 HLA-B RPL9 RPL24 RPL31 HLA-C COX7C GNAS RPS9 RPL23 RPL38 RPL10A NAP1L1 RGCC ARL4C LTB PSMB9 DNAJC8 PPIA H3F3A TPR TOMM7 GIMAP7 ATP5MPL CALM1 S100A11 KLRD1 SYNRG FTH1 SLC38A1 PPP2R5C EIF1 ITM2B TRIR IKZF1 S100A4 LDHA NPM1 CYBA SRRM2 SLC38A2 ZFX SPOCK2 AC008105.3 NOP53 HNRNPA3 HSP90B1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPLP1 RPL10 RPL13 RPS12 RPS14 RPL28 RPS27 TPT1 RPL13A RPS19 RPS15A RPS3 RPL14 RPS23 RPL30 PTMA HLA-B RPS7 VIM RPL39 RPS3A RPL6 RPL37 RPL18A RPS24 RPL11 RPS29 PTPRC RPL36 RPL23A HLA-A RPS13 GNLY RPL29 RPL3 RPS15 ACTB RPS9 RPL37A RPL38 CFL1 IL32 RPS6 HLA-C CALM1 RPL5 RPL27 RPL10A RPS21 RPL23 RPS20 LCP1 EEF1D CCL4 RPL9 CYBA RPSA HSP90AA1 SYNE2 NKG7 CST7 GAPDH EIF1 UBA52 S100A6 RPL24 RBM39 RPL31 GIMAP7 SERF2 EMP3 RPL36AL NACA SEPT7 CDC42 BTF3 HNRNPA2B1 HMGB1 H3F3A MYL12A ANXA1 MYH9 HSP90AB1 RPL22 PABPC1 NDUFA4 RPS4Y1 JAK1 DDX5 YWHAZ STK17A ARL6IP5 PRRC2C DDX17 PPP1R14B GNAS COX8A WNK1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 TPT1 TMSB4X RPS12 RPS19 RPS14 RPL30 RPS3A RPS23 RPL18A RPS3 RPL13A RPL3 S100A4 RPS27 RPL23A PTMA RPL10 RPS13 RPS9 RPL37 RPL11 RPL28 IL7R NACA RPS15A RPL6 RPL14 RPS7 ACTB RPS6 RPS24 S100A6 RPS21 RPL5 HLA-B IL32 RPL9 RPS15 RPL38 RPL10A RPS20 MRPS6 FTH1 RPL37A RPL4 DDX5 RPS29 RPL27 CCNI HLA-C S100A10 CALM1 PFDN5 RBM39 RPL39 RPL29 HSP90AA1 HSP90AB1 CYBA BTF3 TMBIM6 ARID4B RPL36 CCDC91 SON UQCRB NEAT1 SCAF11 UBA52 NUCB2 RPSA EEF1D ACAP1 ETS1 RPL23 EIF1 S100A11 C9ORF78 CXCR4 SUMO2 H3F3B BRD7 HNRNPD CD3G GPR65 JAK1 ITM2B KMT2B AES CLEC2D SP110 HLA-A COX7A2 MYL12A RPS4Y1 SLC25A6 NFKBIA\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPL10 GAPDH RPS19 PTMA RPS27 RPLP1 HLA-B KIAA1551 ACTB RPL28 HLA-A TPT1 RPL13 RPS15 RPL14 SEPT7 PTPRC HSP90AA1 NACA RPL37 RPS6 RPL13A CD3D RPS3A RPL3 CYBA RPS12 ARPC2 H3F3A NKG7 RPL30 RPL36 RPL39 RPS3 RABAC1 HLA-C PCM1 RPS7 CST7 FTH1 RPS9 RPL5 DDX5 PSMA7 CXCR4 MBNL1 RPS20 ARL6IP5 HMGB1 RPS29 ATP5F1E HLA-E RPL23A RPS15A RPL27 LDHA PPP1R14B NEAT1 BTF3 CD3E TCEA1 MTCH1 RPS13 SQSTM1 SRRM1 ACTR3 REL AES PRRC2C COPA TPM3 C1ORF21 NCL KTN1 ARGLU1 GLS ANKRD11 RPL9 RPL36AL CFL1 RPL11 HLA-DPA1 RPL18A SP100 RPS14 SLFN12L FUS SRGN CAPZA1 UBA52 RPS23 EIF1 TOMM20 CALM1 SEC31A ATP5MG UBC ATP6V1G1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS14 TMSB4X TPT1 RPL10 RPS19 RPL30 RPS3 HLA-B RPS12 RPS27 RPL13A RPL13 HLA-A RPL18A RPS23 HLA-C RPL28 RPL11 RPS15A RPS3A RPS24 NKG7 RPL37 RPL24 RPL29 RPS21 RPS15 PTPRC RPL6 RPL9 RPL3 RPL14 RPS7 RPL23A UBA52 NACA CCL4 S100A4 ACTB RPS20 RPS6 TOMM7 ARPC2 IL32 CALM1 FTH1 RPS13 RPL39 CST7 ITM2B CLEC2B RPL37A CD8B RPL36 HMGB1 RPS9 EEF1D RPL22 RPL27 PNRC1 EIF1 EIF3K COX6A1 CD2 CFL1 SET SMC3 ARL4C MYL12A PTMA KLF6 RPL38 EMP3 NEAT1 RPL5 EEF2 HLA-E RPSA PFDN5 AES YWHAB RPS29 MGST3 VIM RHOF OST4 TERF2IP RPL23 IQGAP1 H3F3B RPL36A SNX6 TMEM14B RHOA RORA CD3G UBC CLEC2D\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TPT1 RPL13 RPLP1 RPS14 RPL28 RPL10 TMSB4X RPS12 RPS3 RPL30 RPS27 RPS15 RPL14 RPS23 RPS19 RPS21 RPS3A RPL37 RPL11 RPS24 RPL18A ACTB RPS15A RPL23A RPS6 RPS20 PTPRC RPL39 HLA-C HLA-A IL7R PTMA RPL36AL RPL10A RPL27 RPL24 EMP3 RPS9 ARL4C RPL13A NACA UBA52 CD3D RPL3 CORO1A PNISR RPL38 HLA-B HLA-E IFITM2 S100A10 SERBP1 IL32 PFDN5 SON RPL9 S100A4 RPL29 EML4 GNAI2 CALM1 RPL6 CYBA AHNAK RPL5 TXNIP DDX17 RPSA RPL31 SF1 EIF1 DDX5 KRAS LSP1 EVL RPL36 GIMAP4 RPS7 HSP90AA1 ANXA1 S100A6 GAPDH ITGB1 RPS13 ZNF683 BIN2 ADSS SEPT7 KLRC2 HMGB1 PNN SERF2 CFL1 HNRNPR LINC02446 RUNX3 NCL ENO1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TMSB4X RPS19 RPS14 RPS3 TPT1 RPL10 RPL13A RPS27 RPL23A RPS12 RPL13 RPL28 RPS15A RPS21 RPL30 RPS23 PTPRC RPS15 RPL14 RPL37 HLA-B RPS6 PTMA RPL6 RPL27 RPS24 RPS7 HLA-A RPL3 RPL18A RPL11 RPL39 DDX5 PPP2R5C CYBA YWHAZ FTH1 RPS9 H3F3A UBA52 RPL36AL CST7 HLA-C RPS29 NACA HLA-E NEAT1 CXCR4 RPL29 LYST DEK ARID4B ARGLU1 ITGA4 PIP4K2A C1ORF21 ARHGDIB EIF4A2 UBC ATRX RPL10A RPL37A SRGN PDCD4 TOMM7 RPL9 S100A6 CD44 PIK3R1 HMGB1 APOBEC3G RPS20 ARPC2 LBH CD247 SYNE1 GPBP1 NKG7 CDC42SE2 UBXN1 RPS13 RBM26 CD37 PNN KIF2A ITM2B ATG12 SP100 NRDC HNRNPA3 RPL24 KTN1 CD8A EEF2 GIMAP4 THRAP3 TERF2IP BRWD1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL13 RPL10 TPT1 RPS3 IL7R RPL28 RPS12 RPS19 RPL30 RPL14 RPL3 FTH1 TMSB4X RPS27 RPL11 RPS14 RPS15 HLA-C RPS7 PTMA RPL9 HLA-A RPL13A RPL39 RPS3A RPS23 HLA-B RPL18A RPS6 RPL37 RPL6 RPS24 RPL23A RPS15A RPL29 RPS13 RPL24 LTB RPL37A ACTB UBA52 RPS21 SEPT7 CHD3 RPL23 RPS29 RPS27L HLA-E RPS9 EEF1D RPL22 RPL36 RPL31 SF3B2 NACA CYBA AC025164.1 S100A6 RPL5 HLA-F NKTR RPL36AL PTP4A2 RPS4Y1 PTPRC HNRNPU GCC2 GIMAP7 RORA HNRNPA2B1 ATF7IP2 ARPC2 GBP5 EIF4B NEAT1 ATP5IF1 SRRM2 CALM1 CXCR4 SERF2 PRPF40A UBB ODF2L CST7 TOX4 KTN1 RBM25 CORO1A RSL24D1 HINT1 RPL27 RBM39 LBH LCP1 CD81 WAS BPTF ITM2B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TMSB4X RPL13 RPS12 RPS27 RPS19 PTMA RPL10 TPT1 RPL13A HLA-B RPS14 HLA-A RPS3A RPS3 RPS23 RPL11 RPL37 RPL3 RPL28 SEPT7 RPL6 RPS15 RPL39 RPS24 RPL23A RPS7 IL7R RPS9 RPS6 CXCR4 PTPRC RPL14 RPS15A RPL24 RPL36 CST7 UBA52 ATP5F1E FTH1 HLA-C RPL27 RPS13 RPL9 CD3E RPS29 KLRC2 RPL5 SERF2 CYBA NKG7 RPL37A ACTB SYNE2 ANXA1 GIMAP7 RPL29 DDX5 CALM1 HSP90AA1 YWHAZ RPL30 RPL18A ITM2B PPP2R5C NACA RPL38 DOCK8 SMAP1 HNRNPU NCL IL32 RBM39 RARRES3 GTF2I RPS20 ZBTB38 LAPTM5 PSIP1 TOMM7 C1ORF21 RASGRP1 EIF3G SSR2 HLA-E CLDND1 PRMT2 PIK3R1 RPSA MIGA1 TMEM160 PFDN5 DDX17 PAK2 UFC1 LBH RNF213 RPS21 H3F3B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPS12 RPL13 RPL28 RPL10 TMSB4X RPS14 RPL13A RPS27 RPL30 RPL3 RPS3 RPS19 RPS23 RPL39 RPS6 RPL37 RPL11 RPS3A RPS15A RPL5 IL7R RPS15 RPS7 S100A4 RPL14 VIM RPS13 RPL23A RPL18A RPS21 RPL9 LTB NEAT1 RPS9 RPL37A RPL6 HLA-B PTPRC NACA UBA52 RPS20 RPL29 RPSA RPL10A ACTB SYNE2 RPL24 RPS24 RPL38 PTMA UQCRB RPL23 HSP90AB1 ITM2B RPL27 RPL31 EEF1D HLA-A HINT1 NCL RPL36 AHNAK RPS29 ANXA1 DDX5 HLA-C CAST EEF2 S100A10 EZR HNRNPA2B1 NPM1 HSP90AA1 IL32 KIAA1551 CFL1 NAP1L1 FYB1 FAM107B KLF6 RPL22 PDCD4 HMGB1 BIRC3 EIF1 ENO1 TPM3 LDHB MRPS6 GAPDH C12ORF57 EMP3 TOMM7 HNRNPK NIPBL SARAF NOP53\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPLP1 RPS19 RPL13 RPL28 RPS14 HLA-B RPS12 RPS27 RPS3A RPL23A RPL37 PTMA RPL10 RPL18A TPT1 RPL30 RPS3 RPL3 RPS13 HLA-A RPS23 CLDND1 RPL37A RPL11 NEAT1 RPS15A GAPDH CD3G VIM PPP1R14B DDX5 SEPT7 RPL13A RPL6 RPL39 PTPRC RPL14 RPL24 SERF2 LDHA UBA52 FAM107B RPL29 HINT1 CD2 RPS21 RPS29 CALR UBXN4 FTH1 C9ORF78 ITM2B CFL1 RPS7 RPS15 RPL9 CYBA HLA-C CPNE3 RPS9 RBPJ SLFN5 GNAS RPL27 ATP5MF RPL5 CXCR3 KIAA1551 RPL4 FKBP2 CXCR4 BTF3 RPS6 DDX24 RPL23 RPL10A RABAC1 EMP3 LAPTM5 H3F3A NDUFA2 CLEC2D C1ORF21 PLP2 PRKDC CMC1 NOL7 RPS24 BTN3A2 HMGB1 TAGLN2 RPS20 CCNI MRPS6 RPL36AL NAA35 RAP1B OST4\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 RPLP1 IL7R TPT1 TMSB4X RPS12 RPS14 RPL28 RPL10 RPS15A RPS3A RPS27 HLA-B RPS19 RPL30 RPS15 RPL11 RPL13A RPL39 RPL14 RPL18A S100A6 VIM RPS13 RPL24 RPS23 PTPRC RPL3 RPS3 RPL37A RPS24 RPL31 RPL29 RPS29 RPS6 RPL37 FTH1 NACA H3F3A RPL9 PTMA RPS20 S100A11 UBA52 RPS9 GAPDH HLA-C HLA-A NEAT1 IL32 PNRC1 PDCD4 RPL38 ITM2B RPS7 IQGAP2 RPL6 RPL36 KIAA1551 PPP2R5C UBC ANXA1 LTB CDC42SE2 LDHA XRCC5 AC008105.3 SP100 SARAF RPL23A FYN RPL23 EIF3E RPSA UBXN1 MACF1 MPHOSPH8 INPP4A HNRNPA2B1 DNAJC1 SERF2 POU2F2 CORO1A CXCR4 RPL27 CYBA LBH S100A4 APOBEC3G ZFP36L1 ARPC2 RHOA LUZP1 BUB3 RPL5 HNRNPA3 HMGB1 UQCRB RPS21\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPL13 RPLP1 RPS19 RPS27 RPL10 RPS12 PTPRC RPL28 RPS14 RPS3 HLA-B TPT1 HLA-A RPL3 RPS9 RPL11 RPS3A RPL30 RPL23A RPS23 RPS15A RPS24 S100A4 NKG7 KIAA1551 RPS21 RPS7 RPL13A RPL18A RABAC1 RPS6 RPS20 APOBEC3G RPL14 CD3G RPS15 SEPT7 RORA S100A6 ARPC2 RPL29 RPL9 RPS13 PFDN5 RPL31 RPL6 RPL23 IL32 LBH HLA-C RPL39 NEAT1 GMFG LDHA RPS29 UBA52 GIMAP7 TROVE2 RPL27 TRG-AS1 KLRD1 HSP90AA1 PTMA ARGLU1 ATP5F1E ANXA1 SYNE2 GAPDH KTN1 FGFBP2 WBP11 RPL10A PNISR RPL24 ARL6IP5 PSMA7 S100A11 SERF2 RPL37 CST7 BPTF RPL38 RPL37A UBC EMP3 TGFBR2 KLF6 ATRX STAT3 TAX1BP1 MAP2K2 FAM50A VIM BIN2 SET MSN PPIB YWHAB\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPLP1 RPL10 RPS19 RPS12 RPL13 TPT1 HLA-B RPS27 RPS3 RPL28 RPL39 RPS7 IL32 HLA-A RPL18A RPL11 RPS3A RPL13A RPS15A RPL30 PTMA PTPRC RPL14 CALM1 RPL37 RPS29 RPL37A RPS24 SYNE2 RPS14 RPL5 RPL3 RPS23 RPL23A ACTB RPL6 RPL29 NKG7 S100A6 SRGN RPL23 RPS6 S100A10 ATP5F1E CD2 CD3D SEPT7 RPSA EIF1 HLA-C CD8A ARHGDIB RPS15 SERF2 NACA RPL22 RPS13 RPL10A CD8B COTL1 BCL2 RPL36 PPIA YBX1 VIM HSP90AA1 XRCC5 IFI16 H3F3A GAPDH UQCRB MYL12A S100A4 CFL1 NOP53 RPL27 MSL3 TXNIP EIF3E ABRACL FAM107B HLA-E ITM2B RPS21 CD3G RPS4Y1 ANXA1 ITGA4 RPS9 CYBA TNIP3 GIMAP7 TMEM223 HINT1 CLDND1 HNRNPA2B1 RPS20 FYB1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS12 RPLP1 RPL10 TPT1 RPL13 RPS14 TMSB4X RPL28 LTB VIM RPL13A RPS6 RPL18A RPS27 RPS3 RPS19 RPS3A PTMA RPL5 HSP90AB1 RPL30 RPL3 RPS15A RPS24 RPS13 RPL37A RPS20 RPL23A RPS7 RPS23 RPL14 S100A4 RPS15 S100A6 RPL39 ACTB RPL6 RPL9 RPL29 RPS9 EMP3 RPSA RPS21 RPL37 IL32 RPL23 RPL11 RPL36 HLA-B CALM1 HSP90AA1 RPL10A UBA52 RPL22 RPL27 RPS29 NACA RPL31 HINT1 RPL38 PFDN5 PPIA ATP5F1E S100A11 SEPT7 H3F3A CAST RPL4 S100A10 CFL1 NCL PSMA7 YWHAZ SERF2 RPL24 YBX1 ARPC2 ENO1 SLC25A6 EIF1 MYL12A UBC GAPDH H3F3B RABAC1 HNRNPA2B1 YWHAB CCNI DDX5 RPL36AL PABPC1 HNRNPA3 NPM1 CDC42 NKG7 KIAA1551 PGK1 TPM3 PRRC2C\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS19 TPT1 RPS27 RPL10 RPS23 TMSB4X RPS15A RPS3A RPLP1 RPL13 RPL30 RPL18A RPL28 RPS14 RPS12 RPS3 RPL29 RPL23A RPL13A RPS24 HLA-B IL7R RPS15 RPS9 RPL37 RPL3 RPS13 UBA52 RPL5 RPS7 RPL11 PTMA RPS29 RPL6 SEPT7 CST7 FYN PTPRC HLA-A HLA-C NKG7 NACA RPS20 RPL37A RPL24 RPL39 CYBA HLA-E CD3E RPL14 RPL36AL SYNE2 S100A4 HMGB1 RPL38 DDX5 RPS21 AES RPL9 RPL10A CD3G PFDN5 GIMAP7 CD2 ACTB YWHAQ SRRM2 CXCR4 MYL12A S100A6 EEF1D TPM3 RPL23 TBCA PNISR RPL31 CD3D ARGLU1 DDX17 CAST EVL ARHGDIB KMT2A PNN UBC SRSF11 FGFBP2 TRGC2 NCL TXNIP BTF3 EIF4A2 LAPTM5 MYL12B RPSA SRSF4 ITM2B ZEB2 STAT3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X GNLY RPLP1 RPL10 RPL13 TPT1 RPS3 RPS27 RPS19 RPS14 HLA-B RPL28 RPS12 RPL37A UBA52 RPS24 RPL23A RPL30 RPS23 PTMA RPS3A IL32 RPL37 RPS15 S100A6 PTPRC RPL24 RPL6 RPL11 RPS15A HLA-A RPL18A RPS7 RPL22 RPS6 NEAT1 RPSA H3F3A NACA HLA-C RPL3 GIMAP7 CFL1 S100A4 TCF25 CAST SERF2 VIM CST7 PIK3R1 RPS20 RPL13A RPL31 GAPDH GTF3A CALM1 HSP90AB1 NKG7 RPS13 TMPO RPL5 RPS21 PYHIN1 TXNIP NCL EEF1D RPL14 PNRC1 RPL39 YWHAB LUC7L3 HLA-E RARRES3 SAP18 H3F3B DDX17 S100A10 RIPOR2 TLN1 ITM2B LCK UQCRB SH3KBP1 CMC1 SEPT7 GIMAP4 PABPC1 CXCR4 MBP PNN RPL36 KIAA1551 HMGB1 EMP3 FYB1 RPL36AL GZMA CD3G ADAM10\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS12 TPT1 RPLP1 RPL13 FTH1 RPL10 TMSB4X RPS3A RPS3 RPL11 RPS14 RPL28 RPS27 RPS23 RPL30 RPL13A RPS19 RPS15A RPL3 RPL14 HLA-B RPL6 RPL37A RPL37 RPS6 RPL39 RPL18A RPL10A RPS15 RPS21 NACA RPS9 PTPRC RPS13 RPS20 RPL29 S100A4 HLA-A RPL5 UBC RPS29 EIF1 ITM2B RPS7 RPL22 RPL38 VIM S100A6 PTMA EEF1D CALM1 TIGIT RPL36 RPL9 CYBA RPS24 UBA52 ANXA1 RPL36AL PIK3R1 NEAT1 YWHAB HLA-C EIF4B RPL23 IL7R RPL24 RPSA FYN OST4 RPL23A HINT1 CD2 ATP5MG SERF2 DDX17 RPL27 SARAF RARRES3 SRGN GAPDH PNRC1 ARHGDIB PFDN5 H3F3A CST7 HSP90AA1 NOP53 RNF19A APBB1IP LCP1 DDX5 EMP3 NR3C1 ZFAS1 RPL31 COX7C RPL4 S100A10\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X TPT1 RPL13 RPL10 RPS19 ACTB RPS12 RPS14 IL32 RPS3A LTB RPL30 RPLP1 RPL28 RPL13A RPS27 RPS3 RPS7 RPL3 HLA-B RPL14 RPS13 UBA52 RPS6 RPS23 RPS9 RPL11 HLA-C RPS15A RPS24 RPL6 RPL36 RPL37A HLA-A RPS21 RPS15 S100A4 RPL39 CYBA RPL29 RPL18A S100A6 PTPRC RPL22 PTMA NACA HLA-E RPS20 RPS29 RPL27 RPL9 EIF1 SERF2 CFL1 RPL38 HSP90AB1 RPL23A STAT1 RPL37 IFITM2 CALM1 ATP5F1E KIAA1551 ISG15 SON HLA-F PABPC1 CD48 YWHAZ PPIA RPL10A RPL5 HNRNPA2B1 STK17A HINT1 CALR UBB FTH1 RPSA GAPDH CORO1A PSME1 GIMAP7 XAF1 ZNF217 FXYD5 CD2 GADD45GIP1 NCL CYSLTR1 RPL24 RPL31 SAMD9 TRGC2 ENO1 TAF15 CDC42 PSMA7 SSB\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 TPT1 RPL13 IL7R RPL28 RPL10 RPS27 RPS14 RPL18A RPS3 RPS23 RPL3 RPL14 RPL30 RPS3A RPS19 TMSB4X RPL37 RPS7 RPL13A RPL11 RPL39 RPL9 HSP90AA1 RPL29 RPL37A RPL24 RPL5 RPL6 UBA52 RPL23A RPL10A RPS29 HLA-C RPS15A RPSA PTPRC RPS15 RPS13 FTH1 HLA-B CALM1 HLA-A HMGB1 RPS21 RPS20 PTMA RPL36 PFDN5 RPS6 RPL27 NACA RPL38 ITM2B H3F3A AKAP9 RPS24 STK4 GAPDH HNRNPU SP100 PDCD4 TMBIM6 UBC ETS1 RORA GZMA GNAI2 HSP90AB1 S100A4 ATP5F1E UQCRB TOMM7 CST7 RPL22 RPS9 CNOT4 MPHOSPH8 DDX5 AHNAK AMPD3 OST4 LDHA SYNE2 RPS6KB1 CD3E MGAT4A TRGC1 ODF2L CD44 IL32 SREK1 PCM1 STK17A ARHGDIB COX7C TNRC6B MYH9\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X HLA-A RPS19 HLA-B RPLP1 TPT1 RPL10 RPL13 RPS3 GNLY RPS27 PTMA RPL28 S100A4 RPL30 RPS14 RPS7 RPL11 VIM RPS12 RPS15A RPS3A RPL18A RPL29 RPS20 ARL6IP5 NACA RPL37 RPS6 HLA-C RPL14 RPS21 PSMA7 RPS23 RPL3 PRRC2C PCNX4 MSN PTPRC RPL13A CD3D GAPDH RPS15 EIF1 HNRNPA2B1 DNAJC8 RPL23A HLA-E RPL5 CYBA ITM2B HMGB1 CFLAR FTH1 MBP CD8A RPL27 UBA52 RPS13 XAF1 BCLAF1 HINT1 RNF213 KIAA1551 CD44 UTRN RPS29 RPS24 SERF2 SON PNRC1 SP100 CST7 RPL9 APOBEC3G DDX5 PPP1R14B STK4 NFKB1 GIMAP7 IFIH1 CYTIP HNRNPU H3F3A YWHAZ UBC TMEM245 EPB41 RPS9 IL32 ARPC5 IKZF3 HLA-F CMC1 NDUFA1 SEPT7 S100A6 EEF1D SAMD9L\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS3A RPS19 RPS14 RPS3 RPS27 RPS24 RPL10 TMSB4X RPL30 RPS12 RPL14 TPT1 HLA-A RPL13A RPL23A HLA-B PTPRC RPL13 RPS23 RPL18A RPL3 RPL22 RPL39 RPL28 PTMA RPS7 HLA-C FTH1 IL7R RPL29 RPS15 RPL24 RPL37A RPL37 CD3D PYHIN1 AES CIRBP RPL38 IL32 S100A4 CST7 RPS20 CD2 RPS21 UBA52 RPS9 YWHAB RPS15A MORF4L1 RPL11 UBB CXCR4 RPS13 RPL36 RPSA HLA-E EIF1 GIMAP7 CD8A RPL6 BTF3 FAM107B ALOX5AP TPM3 KLF6 RPS29 EMP3 ARL6IP5 TXNIP NKG7 CORO1A RARRES3 EEF1D NACA RPL9 ITM2B RPL36AL LBH H3F3A RPS6 PRMT2 RBM39 AKAP9 TRGC2 CDC42EP3 RSRP1 RPL10A MYCBP2 PNISR PPIA SARAF HSP90AA1 RPL23 PRRC2C HNRNPF TAF7 KLF13\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPL13 TPT1 RPLP1 TMSB4X RPL28 RPS12 RPS27 RPS14 RPL30 RPS15A RPS3 RPL11 RPL10 RPL13A RPL18A RPS3A RPS23 RPS15 RPS6 IL7R RPS7 FTH1 RPL37 RPL14 RPL3 RPL6 RPL37A RPS13 RPS19 HLA-A RPS20 RPL39 PTMA UBA52 HLA-C RPL10A RPS21 RPL29 LTB RPS9 RPL38 RPS24 RPL23A IL32 RPL5 RPL23 HLA-B RPL36 PABPC1 GAPDH H3F3A RPL27 RPS29 RPSA ACTB RPL22 ARL4C EMP3 ARL6IP5 GIMAP7 RPL31 RPL36AL EIF3D BTF3 RPL9 GNAS HMGB1 FXYD5 CXCR4 CFL1 RPL24 PTPRC NBN AC008105.3 JAK1 SMCHD1 CD3E SAMD3 SERF2 CD3D COX6B1 EIF3K PAIP2 TMBIM6 EIF5B CYBA ATP5F1D PNISR LYAR SON BIN2 CLEC2D S100A4 TOMM7 PIK3R1 KMT2E NCL HDGFL3 EEF1D\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPLP1 RPS12 RPL10 TPT1 RPL28 RPS27 RPS19 RPS14 RPL13 RPL30 RPL6 RPL3 RPS3A HLA-B RPS3 RPL18A RPS15A HLA-A RPS13 RPL39 RPS6 RPS23 RPS15 RPL13A RPL14 RPS7 RPL5 RPL23A RPL11 HLA-C RPS20 PTMA RPL9 RPL29 RPS9 RPS21 RPL38 IL32 RPL24 UBA52 RPL37 PTPRC ACTB RPSA SEPT7 EIF1 SERF2 CST7 ARHGDIB RPL10A RPS4Y1 GIMAP7 GZMA VIM ANXA1 RPL36 GAPDH H3F3B RPL36AL NKG7 CLDND1 S100A6 BTF3 RPS24 NACA IL7R HNRNPA2B1 HMGB1 UBC ATP5F1E RPS29 RPL23 GIMAP4 MRPS6 CD2 H3F3A KLF6 RPL37A ANP32B EEF1D ARPC2 SLC25A6 LAPTM5 MYL12B EZR CD99 KIAA1551 SUMO2 UBB HSP90AB1 PFDN5 RPL27 EMP3 ITM2B HINT1 OST4 YWHAB TXNIP\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPL13 TMSB4X RPS12 RPS27 RPS3 RPL30 RPL10 RPL28 RPL13A RPS19 RPS3A RPS6 RPS14 RPS23 RPS7 RPS15A RPL11 RPS24 RPL3 PTMA RPL37 RPL14 RPL23A RPS20 RPL38 RPL29 HLA-A RPL18A RPL31 HLA-B GAPDH RPS9 RPL37A RPL5 HLA-C CXCR4 RPS13 RPL39 RPL9 RPL6 UBA52 RPS15 RPS29 HMGB1 PTPRC NEAT1 RPL36 SPN BTF3 CLEC2D NKG7 KIAA1551 FYN RPS21 HSP90AA1 RPL24 S100A4 RABAC1 ARL6IP5 GBP4 CST7 STK4 NOP53 RPL36AL EEF1D PLEK AKAP13 SKP1 DDX17 FNBP4 PPIA APOBEC3G UBC TRIR NCL NACA EIF3A CHURC1 IL32 TOMM7 PNRC1 S100A6 NCBP3 PFDN5 EIF1 CD2 SEPT7 NFKBIA SLFN12L BTN3A2 DOCK8 FKBP2 RBM6 MBP SERF2 LBR RPSA\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TMSB4X RPL10 RPS12 RPL13 TPT1 RPS19 RPS27 RPS14 RPS3 RPL30 RPL13A RPL28 RPS7 RPS23 RPL11 RPL3 NEAT1 RPS21 HLA-B RPS15A RPL18A PTMA PTPRC RPS3A RPL9 RPL23A HLA-C RPS6 RPS13 RPL5 RPL14 RPL37 RPL37A RPS9 HLA-A RPS15 RPS24 RPL39 RPL6 CD2 RPL29 NACA HSP90AA1 RPL27 VIM IL32 UBA52 SEPT7 RPL24 RPS29 RPSA RNF213 IL7R ACTB S100A4 EMP3 CD3D HSP90AB1 ANXA1 KIAA1551 S100A6 RPL36 H3F3B GIMAP7 KLRD1 PSMB9 PTP4A2 PSMA7 EIF1 GAPDH PRPF38B MRPS6 PNN RPL36AL IFI16 KTN1 YBX1 YWHAZ PRRC2C GBP4 HNRNPA2B1 LYAR CST7 CALM1 COX7C ARL4C CFL1 PARP14 RPL4 FTH1 CORO1A SRRM2 GNLY SP100 NKG7 MYL12A TPM3 ISG20\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 IL7R RPLP1 TPT1 RPL13 RPL10 RPS14 RPS12 TMSB4X RPS19 RPL28 RPS27 RPS3 RPL13A RPS23 HLA-B RPS24 RPL6 RPL9 RPL39 RPL23A S100A4 RPS6 HLA-C RPL14 RPS3A RPL11 RPS15 RPL30 RPL3 RPS7 RPS20 GAPDH PTPRC PTMA RPL36 RPS21 RPL18A ACTB EEF1D PABPC1 RPL24 RPS15A HLA-A RPS29 NEAT1 RPL29 RPL37 RPL5 KIAA1551 TXNIP CYBA FTH1 JAK1 PPIA RPL38 SERF2 BTF3 RPL37A RPL27 CST7 RPL36AL EMP3 RPL23 RPS13 RPSA HINT1 IL32 LCP1 RPL4 UBA52 AKAP13 RPS9 LTB GIMAP7 EIF5B HSP90AA1 CD48 KIF20B SLC38A2 ARGLU1 PHACTR2 SEPT7 PCM1 GOLGA4 PAG1 H3F3A NACA PSIP1 MYL12B COX7C ZBTB7A ITM2B RIPOR2 SPCS3 VIM RPS6KA3 GPX4 RPL31 PNRC1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS12 TMSB4X RPS19 RPL13 RPS27 RPS15A RPS23 RPS7 RPL10 TPT1 RPL14 GNLY RPS3 RPL28 RPL39 RPS3A RPL11 RPL30 HLA-A RPS15 HLA-B RPL37 RPS14 RPS6 RPL6 RPL23A RPL29 RPL3 RPL18A RPL24 RPL37A RPL13A RPL5 RPS9 HLA-C RPS13 RPS24 RPL36 UBA52 S100A4 RPS21 NKG7 PPIA RPL27 YBX1 NACA CALM1 RPS29 MSN RPSA UBC PTPRC PRF1 RPS20 GAPDH AES CD3G CYBA RPL10A PNISR EMP3 RPL31 COX7C S100A10 WDR60 CLEC2D ZNF644 IL32 N4BP2L2 SP110 RIPOR2 ATP5F1E PYHIN1 HNRNPA3 CD74 KIAA1551 CALCOCO1 VIM BTN3A2 COPB1 DRAP1 RUNX3 JUND CST7 CCT6A MMP24OS PNRC1 FTH1 BOD1L1 CAPZB EEF1D PCMTD1 CAST SNRPD2 PTMA CD3E GPR174 HNRNPU\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 TMSB4X RPS14 TPT1 RPL28 RPS3 RPS19 RPS27 RPL13 RPL13A RPS3A RPL30 RPS12 RPL14 PTPRC RPS15 NKG7 RPS23 RPS15A RPL37A RPL39 RPL11 RPL23A RPL6 HLA-A RPL37 RPL18A RPS7 HLA-B RPL24 RPS29 RPL36AL RPS9 PTMA RPL5 NACA UBA52 RPS21 RPSA SEPT7 RPS20 RPS6 RPL10A RPS24 HLA-E BTF3 RPL29 RPL3 SLFN5 GIMAP4 CYBA IL32 KLRC2 RSRP1 EIF1 CMC1 EIF3A RPL38 ITM2B RPL4 FBXO22 CST7 C1ORF21 RPL9 MSN IL7R RTF1 VPS28 C12ORF75 HLA-C LBH EMP3 LYST HNRNPU YWHAZ HMGB1 UBE2H H3F3A ATP5F1E STK4 ACTB ARF6 RPL22 PRPF38B AC022075.1 TTPAL RIPOR2 N4BP2L2 CD3D FUS LMO4 PTGES3 SRSF7 SERF2 PPIG HNRNPK HINT1 CNBP\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 RPS12 TPT1 RPL13 FTH1 RPS14 TMSB4X IL7R RPS3A RPL11 RPL28 RPS3 RPS23 RPS15A RPS19 HLA-B RPL6 RPS15 RPL39 RPL13A RPS24 RPL23A NACA RPL3 RPS13 RPL14 RPL37A RPL29 RPL36 HLA-A RPL30 RPS27 PTMA RPS20 RPL9 ACTB RPL5 RPL27 RPS21 RPS7 RPL18A RPL24 RPL22 S100A4 RPL37 PFDN5 CYBA RPSA UBC EIF1 NEAT1 HLA-C UBA52 RPL10A HMGB1 SYNE2 SEPT7 RPS9 VIM PPP1R14B NKG7 RPL23 EEF1D HNRNPC RPL36AL HSP90AB1 RPL38 TXNIP RPS29 GZMA CD3E TNFAIP3 H3F3A MYL12A ANXA1 JAK1 ITM2B RPL31 RPS6 LDHA FXYD5 LCP1 SERBP1 SLC25A3 CXCR4 NCL YWHAB HINT1 EIF4B OFD1 EIF3G GNLY LTB HNRNPA2B1 CLEC2B CFL1 GAPDH HNRNPA3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS12 TMSB4X RPL13 HLA-B RPS3 HLA-A RPL3 TPT1 RPL10 NKG7 RPS3A RPL13A RPS14 PTMA RPS19 RPS27 RPL28 HLA-C RPLP1 RPL18A RPS6 RPL14 RPS15A RPL11 RPS24 RPL23A RPS23 RPS7 PTPRC HSP90AA1 RPS29 RPL30 CALR CFL1 UBA52 RPL24 HSP90AB1 RPL38 IL32 CALM1 RPL27 YWHAB EMP3 GNLY H3F3B FGFBP2 CYBA HLA-E RPS20 HINT1 RPL22 RPL29 RPL36 CD3G RPS15 RPS9 TXNIP ACTB RPL37 RPL6 APOBEC3G SRRM2 CCL4 C12ORF57 VIM RPL5 GNAI2 SET S100A10 RPL39 ANXA1 S1PR4 HNRNPU SRGN MIER1 CD81 CST7 RPL23 ANKRD11 UBC RPL9 RBM39 EIF3F PFDN5 SSX2IP ITM2C ITM2B SP110 ASH1L ATP5MF DOCK8 HNRNPAB SERBP1 NACA CCDC12 EEF2 CKAP5 PPP1R14B SF1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPL10 RPLP1 RPL13 TPT1 RPS27 RPS12 RPS3 RPL30 RPS15A RPS23 IL7R RPS14 PTMA RPS19 RPL39 RPS3A RPL13A RPS24 RPL28 RPL3 HLA-A RPL37 RPL5 RPL37A RPS20 RPS21 PTPRC RPL6 UBA52 GNLY RPL14 HLA-B RPL27 RPS7 HNRNPA2B1 RPS15 RPL23A RPS13 MBP RPL18A RPL11 RPS6 ARL4C RPL29 RPL36 LYST RPS29 FTH1 RPL10A AAK1 HSP90AA1 UBB CCNI ATP5F1E RPL24 AKAP13 HLA-C SERF2 RPS9 DNAJC1 PNISR EZR RPL9 DDX46 PTGES3 HNRNPU ARID5B PURA NEAT1 EIF1 SET RHOH TBC1D2B SSB SEPT7 ACTB LUC7L3 GNAI2 RNF219 RPL22 NFAT5 AFTPH PNN VIM EMP3 NOP53 YY1 H3F3A EEF1D SEPT6 JAK1 JAML PPP2R5C YBX1 CALM1 GIMAP4 SUMO2 RTRAF\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPL10 RPLP1 RPS12 RPL13 TMSB4X RPL13A RPS3 RPS14 RPL28 RPL39 RPS3A RPL30 RPS23 RPS6 RPS13 RPL11 RPL18A RPL3 RPS27 RPS15A RPS19 RPL6 IL32 LTB RPL29 RPS24 RPL9 HLA-B RPL37A RPL14 RPL37 RPL23A RPSA S100A6 HLA-A RPS15 RPS9 NACA UBA52 RPL5 PTMA RPL38 RPL10A RPL27 S100A4 RPL22 GBP4 HLA-C RPL23 PTPRC RPS29 IL7R RPS21 RPL24 RPL36 RPS7 BTF3 HINT1 ACTB ATP5F1E LDHB COX7C RPS20 GAPDH GBP1 RPL31 ANXA1 PPIA SERF2 PFDN5 GTF3A GIMAP4 NUCB2 EIF3E HNRNPU MRPS6 ARL4C RPL36AL LYAR CALR EPB41 IKZF2 CD3E NPM1 PRRC2C FXYD5 STAT1 TOMM7 CORO1A CALM1 RNF213 CDC42 EIF1 FGFR1OP2 TNRC6B UBC BAZ1A CD3D\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TMSB4X RPS19 RPS14 RPL10 RPL13 IL7R PTMA HLA-B TPT1 RPS12 RPS27 RPL28 RPS15A S100A4 PTPRC RPL13A HLA-A RPL11 FTH1 HLA-C RPS15 IL32 S100A6 RPL37 RPS23 RPL39 RPL30 RPS13 GBP5 RPL9 RPL14 RPS29 RPL37A HSP90AB1 RPL18A RPL23A RPL27 RPS24 RPS20 NACA RPS7 PNRC1 SRGN HLA-F RPL3 ITM2B UBA52 RPS9 RPL29 CYBA VIM CD2 RPS3A RPL38 NPM1 GIMAP7 TPM3 LTB RPL36 ANXA1 RABAC1 RPL24 RPL10A RPS6 BOD1L1 ATP5F1E HNRNPA3 HNRNPA2B1 HSP90AA1 PIP4K2A RPS21 RPL5 NEAT1 PBXIP1 LYSMD2 ALOX5AP PSME1 HLA-E RPS27L JAML TPR CEBPZ ANKRD11 TMBIM6 IKZF3 RPL6 CDC42SE2 SEPT7 ARPC2 CALM1 EVL APOL3 SUMO2 COX6B1 JAK1 BIRC3 RPSA SARAF\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPLP1 RPS12 RPL13 RPS27 TPT1 RPS19 RPS3 RPS3A RPS14 RPL10 PTPRC RPL11 NKG7 RPS7 RPL14 HLA-B RPL37 RPS15A RPS23 RPL5 RPS6 RPL28 RPL30 HLA-A RPL29 RPL9 RPL6 RPS29 RPS24 PTMA CD2 RPS13 HLA-C UBC CALM1 RPL18A RPS21 RPS9 RPL3 CST7 IL32 RPS15 CASP8 ARL6IP5 RPL39 H3F3A RPL13A STK17A GIMAP7 RPL37A GNAS ACTB PRRC2C SET DDX5 EPB41 S100A6 RPL24 RPL23A NR3C1 SF1 EMP3 RPL22 ANXA1 RPL23 RPL10A PYHIN1 RPL38 TOMM7 LRPAP1 IL7R EIF1 EIF5 CMC1 PSMD8 GZMA C4ORF3 COX7C HLA-F LCP1 RBM8A SERF2 GPX4 GIMAP4 DDX17 C1ORF21 TIGIT MRPS6 CD84 RFC1 ATRX GAPDH CD3G RABAC1 MYL12B FYB1 CYBA HNRNPK\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TMSB4X TPT1 RPL10 RPS14 RPS12 RPL13 RPS27 RPL28 RPS19 RPS3 RPS3A IL7R RPL3 RPS23 RPL6 RPL30 S100A6 RPL23A RPL18A PTMA RPS15A RPL37 HLA-B RPSA RPL14 RPL39 RPS7 S100A4 RPL37A RPS6 NACA RPL9 RPS9 RPL5 RPL29 RPS21 LTB RPS20 RPL13A RPL10A RPL11 NKG7 RPL24 DDX5 RPL22 ARL4C RPS24 CALM1 RPS15 RPS13 RPL23 EZR PTPRC HLA-C YBX1 UBA52 UBB S100A10 H3F3A EMP3 VIM IL32 FTH1 TXNIP YWHAZ HLA-A PABPC1 NOP53 SEPT7 SYNE2 RPL38 ATM NCL RPL36 RPL31 CD3D RPL27 RPS29 H3F3B ACTB GAPDH CYBA EIF1 S100A11 HSP90AA1 ANXA1 GOLGA4 SERF2 HMGN3 TPM3 ENO1 NPM1 ATP5MC2 EIF3E RPL4 JAML EEF1D SLFN5\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPS12 RPS3 RPL10 PTMA RPS19 RPL30 RPS14 RPL3 RPL13 TPT1 RPLP1 RPS27 RPS23 RPS24 RPS13 HLA-A RPS7 ACTB HLA-B RPS15A RPL5 RPL28 RPL6 RPL37 RPS3A RPL18A CXCR4 RPL29 RPS29 IL7R RPL37A RPL14 RPL23A RPL11 ATP5F1E H3F3A EEF1D NACA RPL39 TRGC2 RPL9 RPS20 RPS15 GIMAP7 UBA52 RPL27 RPL4 RPS21 KIAA1551 RPL36 CD3D CD74 RPL13A HNRNPA2B1 RPL24 CST7 IL32 SP110 RPL31 RPL10A FTH1 EOMES EIF1 HLA-E UQCRB CHD4 PTPRC SERF2 SYNE2 HLA-C UBE2I SCAF11 PFDN5 SUMO2 TMBIM6 HSP90AB1 SKP1 RPS27L SET RPL36AL GNAS ARPC2 DDX24 PPIB PPP2R5C CCNI HNRNPDL ARL6IP5 CD2 CYLD PNISR CD99 MYCBP2 LAPTM5 SLC25A3 SON PARK7 SH3KBP1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
[
{
"content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.",
"role": "system"
},
{
"content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPLP1 RPL10 RPS12 RPL13 RPS27 RPL13A RPS14 RPS3A RPS15A RPL28 RPL30 RPS23 RPS3 RPL11 RPS6 RPS19 TMSB4X RPL3 RPL37A RPL18A RPL37 RPL14 RPL29 RPS21 RPL9 RPL39 RPL5 RPS15 RPS20 RPL6 RPS7 RPS13 RPS9 RPL23A RPL10A RPL31 RPS24 UBA52 RPS29 RPL23 RPL24 RPSA RPL36 PTMA NACA VIM HLA-B HLA-A LTB RPL27 IL7R RPL22 RPL38 PTPRC ACTB SYNE2 RPL4 PABPC1 HINT1 BTF3 EIF1 ITM2B GAPDH IL32 NAP1L1 HSP90AB1 SET STAT1 EEF1D PFDN5 GIMAP1 YBX1 SLC25A6 ANXA1 RPL36AL GBP5 KIF2A STK17A CD2 UQCRB PRPF40A SARAF TOMM7 S100A4 SEPT6 GIMAP4 DDX5 CAST CFL1 OST4 RNF213 LDHA PNISR CD3D ARL6IP5 ZFAS1 MYL12B LDHB\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.",
"role": "user"
},
{
"content": "Effector CD8+ T",
"role": "assistant"
}
] |
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