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[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 FTH1 RPL13 TPT1 RPL13A RPS3A RPL10 RPL18A RPS12 TMSB4X RPS19 HLA-B RPS29 RPS27 RPL29 RPS15A RPS24 RPS3 RPL11 RPL30 RPL28 PTPRC SARAF RPS14 RPL23 HLA-A PTMA HLA-C RPS7 RPL14 RPL5 FYB1 RPL6 RPL37 PPP2R5C RPL36 IL7R RPL9 HSP90AA1 UBA52 RPS6 RPS15 CLEC2D RPS13 RPL3 RPL24 ANXA1 PIK3R1 RPL27 CALM1 RPL10A GIMAP7 RPL23A YWHAB HNRNPA3 ARPC2 RPL37A RIPOR2 SRRM2 RPL4 STK4 DDX5 LRRFIP2 NEAT1 LUC7L3 HLA-E UBC TGOLN2 ANP32B NACA RPS23 CLDND1 H3F3B SMCHD1 SERF2 PCM1 AC025164.1 TAF1D PNISR RPL39 ZNF292 HNRNPU SP3 GHET1 NCL DDX46 ITGA4 DEK PCBP2 SRSF5 GAPDH HMGB1 DNAJB6 ARID5B JMJD1C LPXN RPL31 SF1 NDUFA12\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 CXCL5 VIM TPT1 IL1B THBS1 TMSB4X TYROBP PTMA S100A11 CXCL3 NFKBIA S100A6 CD44 NEAT1 S100A10 FCER1G CD300E PKM ANXA5 H3F3B H3F3A ACTB MT2A MT1X HLA-B CD14 CXCL8 DYNLL1 RPL28 SRGN PID1 FOS RPL9 HIF1A PRDX1 MARCKSL1 APLP2 ATP6V0B EIF1 GAPDH SLC7A11 ATP5F1E CTSZ LIMS1 ANPEP UBA52 RPL37 ATP13A3 HNRNPU MSN DDX5 C15ORF48 SERF2 CYBA HSP90AA1 GPX4 LAPTM5 RPL13 PABPC1 RPLP1 CFL1 ADSS RPS3 LYZ RPL10 INSIG1 PFDN5 ITGB1 SRRM2 TLN1 ACSL4 RPL6 RPS15 DOCK5 RPL36AL RPS12 RPL11 ENG RPS6 PFKFB3 GNG11 SLC4A7 COX6A1 LCP1 HNRNPA2B1 PRPF40A PLAUR SQSTM1 PSAP RPS24 UBC IQGAP1 LGALS3 ATP6V0D1 SUB1 TCF25 YBX1 VAPA\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 TMSB4X S100A9 ACTB MT2A CYP1B1 ANXA5 VCAN TYROBP H3F3A TPT1 S100A11 THBS1 S100A6 S100A10 NEAT1 FCER1G CXCL5 LYZ NCF1 S100A4 SERF2 MAFB C15ORF48 ANPEP GAPDH NPC2 PKM ATP5F1E CYBA MXD1 AIF1 LAPTM5 ANXA1 CD44 HLA-B CALM1 UBC IL1B ANXA2 TXNIP ARPC2 PSAP MMP9 SDCBP SOD2 H3F3B CAPZA2 RAC1 LCP1 CFL1 SLC39A8 SLC43A2 DOCK4 DMXL2 UBE2D3 C1ORF122 AP1S2 RPL28 NCOA4 PDE4DIP CSTB HLA-A PSMB1 TACC1 HMGB1 TPM3 CD14 BAZ1A EIF1 ARHGAP18 RPL36AL DHX29 FLNA CDC42 FUCA1 ATP6V0B TAGLN2 CTSS CSF1R LIMS1 EEF1D RPS15 OLR1 ENG DDX5 TPM4 RBPJ CYSTM1 FAM49B EML4 NAP1L1 PLEKHO1 SCAF11 TIPARP PSTPIP2 PNRC1 SLC7A11 UNC93B1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 MT2A CXCL5 TPT1 CXCL8 MT1H RPLP1 RPS12 NEAT1 RPL13 IL1B RPL10 VIM TYROBP TMSB4X RPL28 RPS14 S100A6 FCER1G LYZ H3F3A PTMA RPL30 CYBA SRGN HLA-B ANXA5 RPL11 RPS19 RPS27 RPL9 ANXA1 HLA-A RPS15 ACTB RPL39 MT1F RPS23 GAPDH S100A11 RPL37 CD14 MT1E RPS3A MT1X SOD2 RPS15A RPL14 CD44 RPS3 IL7R NACA SERF2 RPL18A RPS21 RPS7 RPS24 RPL3 ARPC5 C15ORF48 LAPTM5 RPL23A PFDN5 RPL37A RPL6 ATP5F1E RPS20 RPS13 RPL23 RPS9 RPL36 RPL13A S100A10 EREG ARPC2 NAMPT HLA-C MARCKS UBA52 HMGB1 ANXA2 APLP2 TYMP RPL22 SERPINB2 RPL24 PTPRC S100A4 TMEM50A ATP6V0B CYP1B1 HLA-E BASP1 S100A9 PSMA7 CTSS GSTP1 IDO1 LTB\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS19 TPT1 RPL13 RPL10 RPLP1 RPS27 RPS13 TMSB4X RPL29 PTMA RPS14 RPS3A RPL14 RPL39 RPL13A RPS12 RPS15A RPL30 RPL28 RPL9 RPL23A RPS23 RPL18A RPS7 RPS24 RPL37A RPL23 RPL27 RPL24 RPL3 RPSA RPS15 RPS29 RPS20 HSP90AA1 NACA UBA52 RPL36 RPL31 RPS27L RPS21 RPL5 SARAF TRIR EIF1 RPL6 DDX5 RPL11 HNRNPA3 RPL22 HSP90AB1 PPIA CLEC2D H3F3A RPL37 ACTR2 PSMA7 HMGB1 SERBP1 PFDN5 TMEM59 HNRNPU PTPRC ACTB SLC25A5 RPS3 TAX1BP1 GIMAP4 TUBB4B GNAS GSTO1 RPL38 UQCRB EIF4G2 ATP6V1G1 YWHAZ MYCBP2 SEPT6 EEF2 SF3B2 RBM8A YWHAB PRR13 ARL4C PNISR RPL36AL IL7R RPL10A TOMM7 HNRNPA2B1 FTH1 NCOR1 HNRNPK NCL FGFR1OP2 HIST1H4C RRP7A ATF4 RAN\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 LYZ MT2A C15ORF48 TPT1 NEAT1 CYP1B1 TMSB4X S100A11 ANXA5 VIM ACTB TYROBP CXCL8 CYBA RPLP1 IL1B MT1X RPL28 RPL10 SERF2 S100A9 LAPTM5 CD44 UBA52 MT1E LCP1 EMP3 ARPC2 FCER1G NCF1 RPS12 HLA-B S100A10 FBP1 TGFB1 ATP5F1E KYNU RPL13 RPS27 GAPDH SLC11A1 H3F3A RPS24 HSP90AA1 INSIG1 EIF1 TPM3 RPS19 ARPC5 PID1 S100A6 NPC2 CTSZ PFDN5 LIMS1 FPR3 RPL23 NFKBIA SRGN PSAP MT1F GNG5 RPS7 LGALS3 ANXA2 RPL11 PTMA PKM GRB2 HNRNPA2B1 OLR1 RPS23 RPS3 CFL1 CYP27A1 MT1M PTPRE ACTR3 RPS13 RPL39 RPL6 C1ORF122 COTL1 SPI1 PDE4DIP RHOA SLC7A11 ELOB BACH1 COX6A1 MMP9 METTL9 UBB CD53 DYNLL1 SDCBP SMIM25 RPS15\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 TPT1 S100A6 RPS27 CXCL5 RPLP1 VIM RPL10 RPL13 SERPINB2 MALAT1 TMSB4X RPS14 RPS12 THBS1 PTMA CCL2 RPL28 RPS19 RPL30 CYP1B1 RPL6 RPL13A S100A4 HLA-B RPS3A RPS9 RPL3 RPS6 RPL14 RPS15 EIF1 RPL18A RPS7 ATP5F1E RPL5 RPL37 ACTB H3F3A IL7R CCDC88A S100A11 ANXA5 RPL10A FUCA1 NEAT1 RPS23 STAT1 RPL37A NAP1L1 PRRC2C CALM1 RPS13 RPL38 CFL1 RPL36 HNRNPA2B1 RPL39 RPL23A CTSB CD44 EEF1D MARCKS TAGLN2 LCP1 C15ORF48 RPS20 S100A9 SERF2 YWHAZ RPS3 GNAS ACTR2 IL32 TPM3 HMGB1 ANXA1 NDUFA4 SRGN LIMS1 HINT1 HSP90AA1 ZEB2 JAK1 RPS24 TYROBP SOD2 RPL11 S100A10 GPX4 RPL9 DAD1 KYNU MAT2B UBA52 CAST TOMM7 UBB TXN RPL22\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 LYZ CXCL8 TPT1 S100A6 RPLP1 RPL10 TMSB4X IL1B S100A9 RPL13 EREG HLA-B NEAT1 RPL28 RPS19 RPS12 S100A11 S100A10 VIM RPS27 RPS3A RPL39 RPL18A LTB RPS14 S100A4 C15ORF48 PTMA RPS23 CD14 CCL2 RPL13A RPS24 RPL30 ACTB SERF2 GAPDH FCER1G RPS15 RPS9 RPS15A ANXA5 HLA-C CYBA RPS3 RPL9 RPS21 SRGN RPL23 ARPC2 CD44 RPS7 KYNU RPL11 CFL1 RPL3 RPS20 IL32 HLA-A RPL36 RPS6 TYROBP HSP90AA1 RPL37A H3F3A MRPS6 PKM VCAN EMP3 RPL29 ISG15 HSP90AB1 RPL23A LAPTM5 NFKBIA HIF1A RPS13 RPL37 UBA52 RPL6 RNF213 PTPRC LCP1 RPL5 MYL12A PRDX1 RPL38 ATP5F1E ANXA2 CYP27A1 RPL10A NACA ANXA1 CTSS ATP6V0B HLA-E EIF1 PFDN5\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 TMSB4X TPT1 ACTB S100A9 RPLP1 RPS12 RPL10 S100A11 LTB LYZ RPL28 S100A6 HLA-B RPL13 RPS27 MT2A IL32 TYROBP C15ORF48 RPS15A HLA-A RPS23 RPL30 RPS14 RPL9 VCAN RPS3A RPL11 H3F3A RPL39 FCER1G RPL18A RPL13A RPS7 PTMA S100A4 RPS13 RPS19 RPS3 RPS24 MT1X RPL37A HNRNPA2B1 SRGN RPS15 RPL23A RPS9 ANXA5 RPS6 RPL23 RPL29 NACA HSP90AA1 CYP1B1 RPS29 DDX5 RPS20 SERF2 HLA-C RPL6 UBA52 PFDN5 H3F3B ARPC2 CFL1 EIF1 DYNLL1 IFNGR1 GNAS ATP5F1E NEAT1 LAPTM5 CD44 LCP1 EMP3 HSP90AB1 RPL37 RAC1 CD2 RPL36AL RPL38 RPL3 RPL14 S100A10 VIM RPS21 CALM1 RNF213 HINT1 PKM RPL27 RPL24 CYBA ARL6IP5 RPL5 YWHAZ COX7C KMT2E\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 HLA-DRA NEAT1 CYP1B1 ACTB S100A9 TPT1 HLA-DRB1 LYZ S100A11 MMP9 CD74 FCER1G MRC1 TYROBP TMSB4X VIM S100A6 CD14 HLA-B CYBA CXCL5 PTPRE C15ORF48 TXNIP ANXA5 H3F3A EREG ARPC2 CALR SRGN HLA-DPA1 SERF2 CTSB EIF1 CFL1 HBEGF ARPC5 HLA-DQA1 S100A4 AIF1 LCP1 ANXA2 NPC2 FCGR2A S100A10 FBP1 NFKBIA TYMP HLA-DQB1 PDIA3 TPM3 RBPJ GAPDH PLEKHO1 SLC7A11 CTSS VMP1 IL7R DDX5 PKM CTSH PTPRC CTSZ HLA-DMA CD44 UBC IL3RA RPL36AL CXCL8 ZFP36L1 CXCL16 RPS9 ITGB2 RHOA CD53 GSN SDC2 PLA2G7 LGALS3 ATP5F1E YWHAZ LAPTM5 ATP6V0B SLC11A1 PTMA FKBP2 RPL28 TPM4 PPIB PFDN5 ACTR3 PLAUR AP2S1 SPI1 TLN1 LIMS1 GRB2 C1ORF122\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 CCL2 CXCL5 CXCL8 S100A6 TPT1 TMSB4X MT2A CD14 S100A11 HIF1A CXCL1 SRGN GAPDH NFKBIA IL1B VCAN TYROBP EIF1 VIM NAMPT NEAT1 S100A10 CD44 HLA-C S100A9 NPC2 ANXA5 TYMP H3F3A LAPTM5 DYNLL1 FCER1G ATP5F1E RPLP1 ACTB UBA52 C15ORF48 CD300E H3F3B STAT1 BACH1 SOD2 PID1 RPS13 SDC2 RPL10 LYZ RPL13A HLA-B RPL36AL OLR1 RPL28 SPI1 EMP3 CYTIP RPL11 SON PKM CXCL3 ACTR3 ADSS APLP2 MAFB EEF2 HSP90AA1 EFHD2 CCDC88A TCF25 SDCBP ANPEP SLC3A2 CTSS SERF2 ATP6V0B LCP1 RPS3 MMP19 COX6B1 LIMS1 PFDN5 MARCKSL1 S100A4 HLA-A HNRNPA2B1 AP1S2 ARPC5 EMILIN2 CTSZ CCL3 ANXA2 RPL13 RPL14 CARD16 NCL VASP REL HIPK2 SRRM2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 HLA-DRA ACTB S100A9 HLA-DRB1 NEAT1 CYP1B1 FCER1G IL1B S100A11 TYROBP MT2A VIM CD74 HLA-B SRGN S100A6 C15ORF48 EIF1 HLA-DPA1 TPT1 ANXA5 IL3RA NPC2 TMSB4X CTSS UBC GAPDH HLA-E ARPC2 INHBA PRDX1 CD53 AIF1 EMP3 PLAUR CYBA LGALS3 SOD2 ATP6V0B CLEC4E CALR H3F3A CD44 CXCL8 ARPC5 ALOX5AP SERF2 CTSB HLA-C S100A10 WARS YWHAB HLA-DQA1 CTSZ PTPRE HLA-DQB1 ATP6V0E1 IL4I1 PSAP CD40 PLA2G7 IL19 DDX5 ANXA2 RBPJ HLA-DMA TPM3 PPIF TALDO1 CALM1 HSP90AA1 MRC1 TNFAIP8 TYMP HLA-A REEP5 IFI16 CDKN1A MYL12B ACTR2 PTPRC STAT1 SPI1 LCP1 CSTB ITM2B GNAS BAZ1A H2AFY CXCL16 LYZ GLUL ACTR3 PLEKHO1 ITGB2 SERP1 BID LAPTM5\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 CXCL5 THBS1 S100A6 TPT1 TYROBP NEAT1 ACTB PTMA TMSB4X SERF2 S100A11 FCER1G SRGN VIM ANXA5 RPL13 RPL10 CALM1 ATP5F1E H3F3A MMP9 ARPC2 S100A10 S100A4 EMP3 GAPDH SPI1 H3F3B RPS12 RPS3A RPL28 RPS20 HLA-B RPLP1 RALA PKM RPS15 PRDX1 RPS19 CCNI EIF4G2 FYB1 HSP90AB1 ATP13A3 TALDO1 RPS23 RPS15A PID1 RPS24 ELOB UBA52 RPL37A ANXA2 SLC4A7 AP1S2 SLC7A11 RPL24 VMP1 PLEKHO1 SUB1 RPL14 GNAI2 RPL13A NAMPT ACTR2 CTSZ KYNU LIMS1 EIF1 RPL10A CD14 HSP90AA1 TLN1 CYBA MTDH RPL36AL RPL11 RPS14 TPM3 RPL18A DEK HMGB1 RPS13 CDC42 INSIG1 RPS6 YWHAZ CXCL1 RPS27 IQGAP1 RPL30 C1ORF122 RPL23 CXCL8 ENG TGFBI ATP6V0B RPS7\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 CXCL8 CCL2 MALAT1 CXCL5 MT2A FCER1G CYP1B1 MMP9 S100A11 IL1B S100A9 VIM CXCL1 ACTB C15ORF48 ANXA5 CYBA CXCL3 LGALS3 MT1H CTSL CSTB TPT1 FBP1 GLRX TYROBP SERF2 HLA-B TMSB4X VCAN S100A10 RPL10 H3F3A ARPC2 SERPINB2 NEAT1 RPLP1 RPS27 ARPC5 RPS9 SLC7A11 CALM1 RPL28 HSP90B1 NAMPT PRDX1 RAC1 ATP5F1E GAPDH SRGN EIF1 FLNA SERP1 SDF2L1 RPL11 ALOX5AP CFL1 CTSZ CD48 RPS13 TLN1 EMP3 SLC3A2 RPL9 RPS19 TXN LCP1 TPM3 CCL3 RPS20 CD14 SPI1 GSTO1 PTMA RPS15 MRC1 PPIB PTPRE NPC2 HLA-C ATP6V0B MRPS6 HNRNPA2B1 SEC61G PFDN5 TSPO HSPA5 MT1X CD44 CALR RPL3 RPL6 ACTR3 MT1F COTL1 HSP90AA1 CDC37 TYMP PSMA7\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 S100A9 RPL10 VIM RPS14 TPT1 RPS12 RPL13 RPL28 C15ORF48 RPL30 RPLP1 RPS3A RPS27 RPS23 RPS6 RPL11 RPL13A RPL3 CYP1B1 NEAT1 HLA-B RPS13 RPS3 S100A11 RPL29 RPL18A RPL9 PTMA RPL39 RPS15A RPL37 TMSB4X RPS21 ACTB ANXA5 IL1B RPS15 RPS19 H3F3A S100A10 RPL10A RPS9 TXN SRGN TALDO1 RPL36 RPL22 RPS7 RPL23A UBA52 HLA-C ARPC2 RPS29 SERF2 RPS20 PFDN5 RPL14 RPL37A TYROBP C1ORF122 RPSA RPL5 LYZ H3F3B NACA RPS24 RPL6 GPX4 DYNLL1 RPL24 RPL38 NFKBIA FCER1G RPL27 RPL23 NCF1 UBC GAPDH HLA-A CD14 RPL31 EREG GNAS PTPRC HINT1 ATP5F1E CYBA EEF2 GNAI2 UQCRB CALM1 TPM3 ANXA2 RAC1 HSP90AB1 SLC7A11 SARAF PSMA7\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 TMSB4X MALAT1 S100A9 TPT1 S100A6 LYZ ACTB S100A10 FCER1G PTMA NEAT1 TYROBP MT2A S100A11 S100A4 RPLP1 RPL28 RPL10 VIM CYBA RPL13 RPS15A RPS15 SERF2 CYP1B1 RPS3A RPL23 SRGN LCP1 MMP9 RPS24 ANXA5 CTSZ H3F3A ARPC2 HLA-B RPS14 MARCKSL1 PKM NACA C15ORF48 ATP6V0B RPS3 ATP5F1E RPL6 CFL1 MT1F RPS9 LAPTM5 RPL37A RPS27 H3F3B LGALS3 HMGB1 AP1S2 HLA-C SLC7A11 KYNU TALDO1 SPI1 RPL13A MT1E ANXA2 RPL29 GSTP1 RPL30 RPL37 ARPC5 DYNLL1 UBA52 GAPDH PID1 EIF1 MT1X ZFAND5 CXCL5 RPL9 HINT1 RPS19 RAC1 CD44 CD14 CKLF RPS13 ARL6IP5 MSN LIMS1 PFDN5 NPC2 RPL18A DDX17 GPX4 ATP6V0E1 RPL11 PSAP GSTO1 PTPRC GNAS RPS12\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 THBS1 SERPINB2 NEAT1 S100A9 TPT1 SOD2 CXCL5 TYROBP S100A6 FCER1G ANXA5 S100A11 CD14 S100A10 SLC7A11 CCL2 SRGN VIM CD300E ACTB VCAN CYP1B1 H3F3A NPC2 C5AR1 TMSB4X CCL4 CCL4L2 CTSL DDX5 SERF2 H3F3B FUCA1 APLP2 CAPZA2 GPX4 CFL1 ZEB2 SERP1 GAPDH SLC43A2 OLR1 LGALS3 DMXL2 ACTR3 CALR HNRNPA2B1 CXCL8 RPL28 YWHAB LCP1 ARPC2 PKM TLN1 ATP6V0E1 CD44 ANXA2 ARHGAP18 IL1B ATP13A3 NCOA4 RAC1 YBX1 BRI3 SKIL ARPC5 REL EIF1 HLA-B C15ORF48 DDX17 TMBIM6 KYNU AIF1 ACTR2 SPI1 MARCKSL1 TLR2 TALDO1 SQSTM1 CYBA JUND MAFB NINJ1 SDCBP UPP1 PSMA7 PSAP LAPTM5 SMAP2 TAX1BP1 CTSZ GRB2 RAP1B LIMS1 GNG5 LRRFIP1 ASAP1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 LYZ TPT1 S100A9 IL1B RPLP1 RPS12 CYP1B1 RPS3A RPL13 RPL10 S100A11 MT2A RPS14 FCER1G RPL28 TMSB4X RPL30 NEAT1 RPS23 CXCL8 RPS27 RPL13A C15ORF48 S100A6 ACTB CYBA RPL11 TYROBP RPS19 RPS15A RPS3 RPS13 RPL18A S100A10 H3F3A RPL39 VIM SERF2 HLA-B RPL5 TALDO1 RPL23 RPL37 RPS6 RPL9 ANXA5 RPL3 RPS20 RPS24 CD14 RPS15 RPS9 MMP9 NACA UBA52 RPL24 RPL36 PID1 PTPRC LCP1 CALM1 ARPC2 RPL6 EIF1 RPL22 ARPC5 H3F3B COTL1 RPL37A CCNI MT1X SRGN RPL23A KYNU RPL14 NPC2 RPL29 METTL9 RPL31 HSP90AA1 RPL38 PTMA RPS7 RPS21 HLA-C ATP5F1E SARAF MARCKS RPSA RPS29 CD44 RPL27 RPL36AL LGALS3 TYMP CKLF ACTR3 SRRM2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 CXCL5 MT2A CCL2 VIM S100A6 GBP1 TPT1 ACTB S100A9 S100A11 FCER1G STAT1 ANXA5 TYROBP S100A4 C15ORF48 SOD2 GAPDH LYZ NEAT1 EIF1 TNFAIP2 CYBA S100A10 CTSZ MT1X IDO1 HLA-B SRGN PDE4DIP SERF2 PARP14 VCAN TYMP ATP5F1E HNRNPA2B1 CFL1 EMP3 CD44 PKM CCL4 C1ORF122 MT1H IL1B MARCKS RAC1 TNFAIP8 CXCL8 RPL28 RPLP1 LCP1 RPL10 GBP5 ARPC2 RPS13 TMSB4X PTPRC ANXA2 KYNU HLA-A CD14 PSTPIP2 ACSL1 ACTR3 DNAJA1 MAFB ANXA1 RPS20 LAP3 TPM3 PTMA FYB1 GK BACH1 CYP1B1 RPL13 HLA-C H3F3A RPS14 THBS1 RPS12 YBX1 RPS9 RNF213 APOL6 YWHAZ H3F3B TLN1 RPS27 C3AR1 CXCL1 TNIP1 PID1 YWHAB ANPEP CTSS TXNIP RPL6\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 MT2A NEAT1 S100A9 IL1B TPT1 TYROBP ACTB C15ORF48 SOD2 S100A11 S100A6 STAT1 HLA-B CYP1B1 H3F3A FCER1G CCL2 MT1X ANXA5 ARPC2 LYZ SERF2 CFL1 RPLP1 CYBA RAC1 VIM TMSB4X EIF1 SAMSN1 KYNU CD300E CTSZ CD14 NFKBIA SRGN CTSS CXCL5 PKM PTMA NPC2 DDX5 ACTR3 TXN TLN1 SLC7A11 RPL28 HLA-A HNRNPA2B1 GRB2 EPB41L3 SDCBP PTPRE CTSB PLEKHO1 MT1E NFE2L2 HLA-C HSP90AA1 RPS27 YWHAZ TAX1BP1 PID1 LYN RHOA MT1F C1ORF122 SDC2 FYB1 H3F3B ARPC5 RNF213 NCF1 SKIL CYP27A1 ANXA2 GBP1 GPX4 CSTB ATP5F1E ITM2B PPP1R18 TPM3 RPS9 HNRNPM MARCKS S100A10 FCN1 LAPTM5 TNFAIP6 SPI1 RPL13A ATP6V0E1 PSAP ACTR2 NACA CHCHD2 PEA15\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 TPT1 RPL13 RPL10 RPS12 RPLP1 RPS3A RPL30 RPS14 RPS27 CYP1B1 RPS6 RPL13A RPL18A RPS23 RPL28 LYZ RPS19 RPL37 SLC7A11 RPS15A TMSB4X NEAT1 RPS20 RPL23 S100A11 RPL11 RPS13 PTMA S100A9 EIF1 RPL39 RPS15 RPS3 RPL9 RPL36 RPS9 HLA-B RPL37A RPS7 RPL23A RPL5 RPL3 S100A6 RPL14 RPL29 C15ORF48 VIM RPS21 RPL24 RPL22 UBA52 HSP90AA1 RPL6 H3F3A PPIF RPL27 PABPC1 ANXA5 RPS29 VCAN RPSA HSP90AB1 RPL10A SRGN RPL31 PFDN5 RPL36AL TYROBP NACA GAPDH RPL38 EEF1D CD14 CCNI PNRC1 S100A10 ATP5F1E SERF2 RPS24 GPX4 PTPRC ACTB NAP1L1 BZW1 SPI1 TOMM7 PTP4A2 HLA-C BRI3 MPHOSPH8 UBC LMNA IL32 PTPRE COX7C LGALS3 HLA-A SLC25A6\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 CXCL5 SERPINB2 CXCL8 RPS12 TPT1 CCL2 RPL10 RPL13 RPLP1 NEAT1 RPS14 RPL28 RPL13A RPL30 RPL11 RPS27 RPS3A RPS3 HLA-B MMP9 RPS20 RPS23 RPL18A RPL14 RPS15A RPL3 RPL37 RPL39 RPS15 RPS13 VCAN RPS6 TMSB4X RPL6 RPL9 RPS29 RPS19 RPS21 RPSA RPS9 RPL23A PTMA RPL23 RPL37A RPS7 HNRNPA2B1 RPS24 NPC2 CXCL3 UBA52 RPL5 LTB CD44 IL1B MRC1 PTPRC ACTB RPL27 NACA RPL29 RPL36 ITM2B FTH1 TGOLN2 SLC7A11 RPL31 CCL3 STAT1 RPL10A EREG RPL24 GIMAP7 VIM NAP1L1 CALR PTGS2 RPL38 NPM1 RPL22 CXCL1 EIF1 HLA-C TLR2 BTF3 EMP3 LDHB S100A6 PDIA3 IKZF1 CYBA CYP1B1 ZEB2 C5AR1 TMBIM6 ARPC2 APLP2 HLA-E DMXL2 MYL12B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 CYP1B1 TPT1 VIM C15ORF48 RPLP1 NEAT1 ANXA5 KYNU HLA-B SLC7A11 SOD2 CXCL8 PTMA TYROBP TXNRD1 S100A6 CD44 TMSB4X SRGN SMAP2 NAMPT RPL28 TXN HSP90AA1 TALDO1 RPL10 EIF1 RGCC MRPS6 LGALS3 INSIG1 BACH1 S100A11 YBX1 MARCKS RPS27 S100A10 GAPDH HSP90AB1 CHD4 H3F3A PFDN5 ATP5F1E CSTB ARPC5 LYZ PKM CYBA SERF2 ARPC2 RPS14 BID STAT1 RPS9 CYTIP C1ORF122 RPL13 PLEK JUND RPL13A PEA15 DNAJB6 TAGLN2 RBPJ RPS24 FCER1G RPS7 PTPRE RPL36 RAP1B UBA52 PRDX1 ISCU PLEKHO1 APOL6 TNFRSF1B YWHAZ SH3GLB1 RHOA LCP1 HLA-A TGFB1 ACTB DDX5 HSPH1 SDCBP RPS19 S100A4 CPEB4 MBNL1 SPI1 UBE2D3 BPTF TMEM123 SFPQ PTGES3 PAK2 CCNI\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 RPLP1 TPT1 CYP1B1 RPL28 RPS12 RPL10 RPS14 RPL13 SRGN C15ORF48 S100A11 SERPINB2 NEAT1 CCL2 EIF1 RPS27 S100A9 RPL30 RPL13A PTMA TMSB4X CXCL8 RPS15A RPS13 RPS24 HLA-E HLA-C HLA-B PTPRC PNRC1 EMP3 RPS7 RPS3A ARPC2 S100A10 RPS19 RPL39 PSMB9 VCAN THBS1 RPL14 RPL36AL LGALS3 ACTB RNF213 ANXA5 UBA52 H3F3A RPL29 VIM RPS15 SERF2 SLC7A11 JARID2 HNRNPA2B1 GAPDH ZFAS1 PFDN5 TYROBP UBB NACA H3F3B MRPS6 GPX4 TRGC2 KTN1 RPS3 CD14 RPS21 TXNIP PPIF BZW1 TPM3 TXN UBE2D3 CCNI RPL38 JUND NAMPT HSP90AB1 DNAJA1 RPL18A MAP3K8 RPL5 RPL11 RPS6 ATP5F1E KIAA1551 N4BP2L2 RPL37A RPS23 RPL9 SEPT7 HLA-A CST7 POLR2L SQSTM1 EIF5\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 CXCL5 S100A6 THBS1 TPT1 VIM NEAT1 S100A10 S100A11 ANXA5 S100A4 CALM1 CD14 ACTB CXCL8 SERF2 SERPINB2 ANXA1 PTMA TYROBP FCER1G ARPC5 EIF1 HLA-B NAMPT TMSB4X CYBA MRPS6 RPL28 RAC1 GAPDH H3F3A PKM RPLP1 RPS24 RPS27 TALDO1 KYNU ANXA2 SPI1 H3F3B EMP3 PRDX1 YBX1 SRGN UBA52 ATP5F1E TYMP RPS15 ATP13A3 RPL6 CFL1 SLC7A11 PFDN5 SH3KBP1 RPL10 TXN GNAI2 CYP1B1 IL1B PID1 CARD16 TMBIM6 ACTR2 GPX4 ATP6V0E1 LDHA ATP6V0B SDCBP EREG VCAN RPL13 DEK TPM3 ANPEP HMGA1 PPP1R14B MARCKSL1 YWHAZ CD300E HNRNPA2B1 SKP1 CD44 DDX5 LIMS1 RPS7 LRRFIP1 HINT1 HLA-C UBC RPS19 MGST1 ARPC2 HNRNPU HIF1A PTPRE RTN4 RPL37 HLA-A\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 CXCL8 FTH1 IL1B TPT1 EIF1 HLA-DRA CCL2 RPLP1 S100A11 C15ORF48 VIM RPS3A SERPINB2 H3F3B RPL28 HLA-A RPL11 SRGN MIR3945HG ANKRD22 GBP5 HLA-B RPS12 HLA-C CD14 CTSS IDO1 TMBIM6 RPS27 SLC3A2 UPP1 NFKBIA GBP1 HSP90AA1 GAPDH EMP3 RPS14 SOD2 RPS19 CD74 RPL13 LYZ GPX4 ANXA5 PLAUR RPL6 GNG5 TXN TYROBP CD53 RPL10 ATP6V0B MMP9 EIF5 RPS3 S100A6 RPS23 CD44 LAPTM5 TGFB1 SLC25A37 RALA PTMA ZFAS1 WARS CYP1B1 UBE2D3 UBA52 RPL29 UBB H3F3A RPS13 UBC LACTB S100A9 RPL9 CD69 PNRC1 SLC2A3 TYMP S100A10 NAMPT CYBA PARP14 STAT1 PLEK RPS24 DEK TMSB4X KYNU RPS15A HLA-E NFE2L2 ISG15 RBPJ RPL23A PSMA7 PRELID1 RPS6\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 TMSB4X ACTB HLA-B TYROBP S100A6 VIM S100A11 RPLP1 TPT1 S100A4 RPL13 PTMA RPL28 RPS14 RPL10 S100A10 IL32 RPS12 IL1B ANXA5 FCER1G LYZ H3F3A RPS27 SRGN RPS3A BIRC3 CXCL5 RPL29 ANXA1 HLA-A EIF1 RPL30 RPL11 RPS23 NEAT1 RPS6 TPM3 RPL5 PSMA7 PFDN5 RPL23A SERF2 RPL13A PRDX1 PKM RPS15 RPS7 RPS15A RPS9 HSP90AB1 CALM1 CCL2 HLA-DRA CD74 LTB RPL18A PLEK ANXA2 RPS3 TMEM50A RPL3 YWHAB GAPDH RPS20 RPL14 RPS24 RPS19 YBX1 TYMP PTPRE CD44 ARPC2 RPL9 UBC C15ORF48 HLA-C CTSZ ATP5F1E RPL23 NDUFV2 PTPRC HSP90AA1 ATP6V0B STAT1 PNRC1 HNRNPA2B1 BRI3 COX5B COX7C RPSA LIMS1 CFL1 BID NPM1 H3F3B NFKBIA ACTR3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 TPT1 RPLP1 CXCL8 CYP1B1 MT2A RPL10 NEAT1 RPL13 IL1B S100A11 RPS12 TYROBP RPL30 LYZ TMSB4X CXCL5 EREG RPS27 RPL28 RPS19 ANXA5 RPS6 VIM FCER1G RPL11 HLA-B RPL13A S100A9 RPS14 RPS15A SERF2 S100A6 RPS3 RPS23 C15ORF48 RPL5 ACTB RPS15 PKM RPS3A PTMA S100A10 RPS7 RPS13 SLC7A11 CALM1 RPL39 RPS9 RPL9 MMP9 ARPC5 H3F3A CD14 RPL18A RPL23 ARPC2 RPS21 RPL37 THBS1 GAPDH RPL29 HLA-A KYNU RPL3 HLA-C RPL14 RPS24 RPL23A LIMS1 HNRNPA2B1 VCAN UBA52 RPS20 RPL24 NACA MRPS6 PTPRE ANXA1 RPS29 PFDN5 OLR1 ATP5F1E PTPRC GIMAP7 CD44 SDC2 RPSA SRGN STAT1 PID1 GNG5 PDIA3 CYBA UBC RPL37A RPL31 RPL6 ACTR3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 S100A9 MALAT1 LYZ S100A11 VCAN S100A6 ACTB TPT1 FCER1G TYROBP ANXA5 TMSB4X S100A10 IL1B H3F3A CD14 NEAT1 CYBA C15ORF48 SRGN GAPDH HLA-B CYP1B1 SERF2 ARPC5 HLA-A STAT1 CXCL5 NPC2 VIM MARCKSL1 PID1 SDCBP BRI3 H3F3B SPI1 NFKBIA PTPRC EIF1 LCP1 FUCA1 CFL1 COTL1 ACTR2 CD44 VMP1 SOD2 MMP9 FCGRT RPL28 CDC42 PKM PTPRE ARPC2 RHOA ALOX5AP CTSS CTSZ LAPTM5 PFDN5 FCN1 HLA-E JUND TYMP CALM1 RPLP1 ORAI2 GRB2 PNRC1 ARHGDIB CYP27A1 ATP6V0B ARL6IP5 IQGAP1 APLP2 PTPN12 ENG HLA-C GLRX CXCL8 EFHD2 DDX5 DYNLL1 RPS9 CLEC7A NCF1 RPS27 SQSTM1 ATP6V0E1 C1ORF122 RPL36 SMIM25 YWHAB PDIA3 HSP90AA1 CYTIP LIMS1 TALDO1 UBB\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 MT2A S100A6 NEAT1 S100A9 EREG ACTB SRGN VIM TPT1 CXCL8 LYZ CXCL3 S100A11 TYROBP TMSB4X MMP9 FCER1G HSP90B1 S100A10 H3F3A IL1B PTMA ANXA5 HLA-B CALM1 S100A4 EIF1 SOD2 GAPDH RPL28 STAT1 NPC2 MAFB CTSZ SLC7A11 EMP3 SERF2 HSPA5 CD14 PID1 NFXL1 ARPC2 RPL10 PKM PFDN5 MT1X CD44 FN1 RPLP1 MT1F TYMP ANPEP ATP5F1E MRPS6 VCAN CEP170 LIMS1 RPL23 LAPTM5 CALR PSAP C15ORF48 NFKBIA MARCKSL1 ATP6V0B RPS9 PPIB YBX1 RPL11 H3F3B TGFBI CTSS TPM4 SDF2L1 RPS3A RAC1 ANXA1 RPS19 GBP1 ACTR3 TPM3 CFL1 FUCA1 YWHAZ HLA-A THBS1 FPR3 INSIG1 ATP6V0E1 UBA52 PDIA3 PNRC1 TALDO1 TMBIM6 CKLF APLP2 RPS27 SUMO2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 TMSB4X TPT1 RPLP1 CXCL5 S100A6 RPS27 RPL13 RPS12 ACTB RPL10 RPS23 RPL37 MT2A RPS14 PTMA RPL28 H3F3A RPL11 RPS3A LAPTM5 NEAT1 RPS15 S100A11 RPL18A HLA-B RPL9 S100A10 RPS15A HLA-A RPL30 ATP5F1E CALM1 VIM SERF2 RPL37A SOD2 NACA TYROBP MT1X ARPC2 HNRNPA2B1 RPS7 RPS29 RPS19 RPS21 RPS6 RPL38 RPS3 RPL10A PFDN5 SLC7A11 RPL23A RPL3 RPL27 GAPDH PID1 RPSA RPL13A RPL24 PKM PPP2R5C H3F3B RPL14 RPL6 HSP90AA1 RPL23 SQSTM1 MBNL1 ATP13A3 RPL39 CTSZ SON UBB RPL29 RPS13 EMP3 APLP2 SARAF RPL22 RPS20 MRPS6 RPL36 RPL5 RPS9 TOMM7 ANPEP SEPT7 HNRNPU RPS24 ANXA5 PTPRC GBP2 KYNU FPR3 GNAI2 HMGB1 EIF1 DDX5\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 RPL10 RPS12 TPT1 RPLP1 RPL13 RPL28 RPS23 RPS14 TMSB4X RPL30 RPL3 RPS6 RPS27 RPL11 RPS15A RPL14 RPS3 RPL13A RPL18A RPS3A IL32 RPS19 ACTB S100A11 RPS13 LYZ RPS21 RPS24 RPL29 RPL23A RPS9 RPL37 TYROBP RPL24 S100A9 RPL6 RPL9 HLA-B RPS15 RPL39 RPS7 RPL5 UBA52 RPSA PTMA RPL37A IL7R VIM S100A6 RPL36 C15ORF48 HINT1 RPS20 NACA GBP5 S100A4 RPL23 RPL38 S100A10 SERF2 RPL27 CYP1B1 H3F3A RPL22 RPS29 RPL10A ARPC5 LTB OLR1 ATP5F1E PTPRC CYBA AC020656.1 YBX1 HSP90AA1 RPL4 SET RPL36AL PKM TOMM7 PFDN5 ANXA5 SDC2 EIF1 CD44 ATP5MG MMP9 LDHA LCP1 OST4 HLA-A DYNLL1 GAPDH DDX5 ANPEP EDF1 TRIR ARPC2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 TPT1 TXN SRGN VIM C15ORF48 CXCL8 TXNIP S100A11 S100A6 HLA-B RPLP1 GBP1 EIF1 RPL28 CYBA IL1B PLEK RPS9 RPL13 TYROBP RPS12 CCL2 RPS19 CXCL9 H3F3A VCAN S100A10 HLA-A GBP5 S100A9 ANXA5 CD14 ZFAS1 RPS3A NEAT1 TYMP UBA52 SDCBP PNRC1 RPS27 HSP90AA1 HLA-C RPL10 GBP4 TMSB4X PPIF SERF2 RPS24 RPL9 WARS SOD2 CSF2RB ARPC2 PFDN5 LYZ ANXA1 H3F3B RNF213 LGALS3 RALA PARP14 CD44 HLA-E CCNI JUND ATF4 RPS13 RPL11 RPL22 APOL6 CYP1B1 RGCC PKM GNG5 HSP90AB1 S100A4 RHOA RPS29 RPS6 NAMPT ACTB HINT1 SLC7A11 PLSCR1 RPL37 SLC3A2 RPL18A SMIM25 TNFRSF1A FCER1G PSAP SARAF RPL30 CDKN1A GPX4 RPL38 RPS3 RPS14\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 RPLP1 CXCL8 TPT1 C15ORF48 TMSB4X RPS12 CYP1B1 RPL10 LGALS3 RPS14 S100A11 S100A6 NEAT1 RPL30 RPS27 S100A9 HLA-B RPL28 H3F3B THBS1 RPL11 RPS20 SRGN RPS23 PTMA ATP5F1E CYBA RPS19 NFKBIA VIM RPL13 PTPRC RPS3 RPS24 RPS15A RPS15 RPL14 HLA-A TYROBP HLA-C EIF1 JUND SLC7A11 IL7R H3F3A ARPC2 PTPRE RPS9 NACA SON PSAP EMP3 RPL37A RPL37 ATP6V0B RPS21 TALDO1 RPS3A UBB S100A10 PNRC1 SERF2 RNF213 TXN MARCKSL1 DDX5 PARP14 CTSB COX7C SRRM2 PFDN5 UBA52 RPL29 GBP1 ARRB2 PSME1 S100A4 RPS29 ATP5MG ARPC5 WARS RPS13 RPL27 ACTB RPL6 ANXA5 RPS7 RAC1 MYL12A TYMP FAM107B SQSTM1 DYNLT1 PRF1 DDX17 YY1 SEPT7 IL1B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 TPT1 CXCL5 RPS12 RPL13 RPLP1 TMSB4X RPL10 VIM RPS27 RPS14 CYP1B1 S100A6 SERPINB2 RPL13A RPL28 IL7R THBS1 RPS23 RPS3 RPL37A RPS19 RPS3A ACTB S100A9 RPS6 RPS9 RPL9 RPL3 RPS20 CCL2 UBA52 RPL23A RPS7 RPL30 RPL27 RPS15A RPS13 RPL11 RPL18A CFL1 RPS24 RPL39 RPSA RPS15 CD44 FUCA1 S100A4 CALM1 PTMA HLA-B NEAT1 ANXA5 RPL5 RPL22 H3F3A TYROBP RPL24 RPL38 MARCKS RPL29 RPL6 SOD2 ATP5F1E STAT1 IL32 HNRNPA2B1 FCER1G RPS29 PDE4DIP CTSB GAPDH ARPC2 YWHAB LTB YWHAZ PTPRC SRGN HSP90AA1 S100A11 RPL31 PFDN5 EIF1 TPM3 LCP1 ANXA2 SON CXCL8 LYZ RPL23 BRI3 ITM2B ACTR3 RPL37 MYL12A MAFB SERF2 SDCBP DYNLL1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 TPT1 TMSB4X NEAT1 C15ORF48 TYROBP S100A11 HLA-DRA ACTB CD74 H3F3A ANXA5 SERF2 CXCL8 PTMA HLA-B S100A6 PRDX1 LYZ SRGN TXN FCER1G RPLP1 RPL10 HLA-DPA1 HLA-DQB1 NCF1 PNRC1 CYBA EIF1 HLA-DRB1 RPS19 GBP1 UBA52 ATP5F1E RPS9 LGALS3 CST3 RPS27 EMP3 RPS23 HSPA5 RPL30 PFDN5 CALR ARL6IP5 STAT1 BID ZFP36L1 ARPC5 ITGB2 DEK RPS24 HLA-C HSP90B1 ARPC2 TFEC TALDO1 IL1B SLAMF7 YWHAZ RPL18A RPL29 CCNI PLEKHO1 LCP1 HSP90AA1 VIM PLA2G7 TNFAIP8 RPS20 RAC1 TPM3 SLC43A2 PRELID1 RPS14 CD44 KYNU RPL13A RPL28 SMIM25 RPL6 WARS CHCHD2 MBD2 CFL1 ATP6V0E1 RPS12 DDX5 CYP1B1 NPC2 TGFB1 PTPRE GNG5 CTSS NFE2L2 HLA-A CD84 TMEM176B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 HLA-DRA CXCL8 NEAT1 MMP9 HLA-DRB1 CXCL5 INHBA CYP1B1 CD74 HSP90B1 HLA-B SLC7A11 HSPA5 EREG SLC11A1 HLA-A LYZ SERPINB2 PDIA3 HLA-DPA1 CALR IL3RA CYBA PDIA6 CXCL3 ITGAX HLA-C STAT1 DDX5 FCER1G HLA-DQB1 ZFYVE16 SRGN CANX HYOU1 DNAJC3 PSAP NCOR1 MRC1 HLA-DQA1 GPAT3 PPIB CTSS ARHGAP10 FAM133B ZNF430 CEP350 ANKRD11 KYNU SLC3A2 CKLF CD44 HLA-E TMBIM6 TLK1 ASAP1 PTPRE MIA3 AKAP13 SSR3 CHST11 TRAM1 CCL24 AKIRIN2 SETX ATP1B3 SEC11A ANPEP REL HIF1A ACTR2 OS9 BCAP31 CD53 ATP6AP2 KDM5A MRPS6 CTSL USP47 TGOLN2 PARP14 SDF2L1 LUC7L3 FAR1 EDEM3 STT3B KIAA1551 JARID2 NUMB ZNF26 FUS CBL SDF2 ARHGAP26 ENG ENTPD4 VMP1 CCDC47 CXCL1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 CYP1B1 MALAT1 TPT1 RPLP1 TXNRD1 SLC7A11 VCAN PPIF EIF1 S100A11 RPL28 SRGN TYROBP RPS12 ANXA5 RPL30 S100A10 RPL18A CYBA TXN UBA52 LGALS3 RPS27 CDK5RAP2 HSP90B1 CYP27A1 RPS20 PRDX1 PNRC1 RPS15 PTMA YBX1 RPS14 HSP90AA1 DDX5 SERF2 RPL10 RPL9 ARPC2 ACTB SLC3A2 ZFAS1 CCNI RPL13 RPL11 HLA-B GLS RPS9 ATP5F1E LYZ RPL13A PLAUR HSPA5 RPL36 RPS13 RPS19 RPS24 CALR C15ORF48 JUND KYNU H3F3B INSIG1 RPS7 ATP6V0B TMEM123 RPL4 ASPH TNPO1 SERPINB2 H3F3A RGCC CD44 CD164 PFDN5 IL1RN CTSB EIF5 RPL39 S100A9 PDIA3 PABPC1 SET NAMPT PRRC2C ADIPOR1 CSNK1A1 DDX3Y HSP90AB1 POLR2L IQGAP1 HIPK2 HNRNPA2B1 SLC2A3 VASP CDV3 ADGRE2 HBEGF HLA-E\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 S100A9 MALAT1 MT2A CXCL5 CXCL8 CXCL1 IL1B CXCL3 HLA-DRA ACTB LYZ TPT1 FCER1G SRGN TYROBP NEAT1 S100A11 HLA-B S100A10 CD14 EREG MAFB ANXA5 FN1 HLA-C GLRX S100A6 MMP9 CD74 VIM CYBA H3F3A HLA-DRB1 TMSB4X GBP1 NCF1 ARPC2 MT1X GAPDH SDC2 SLC39A8 MXD1 MT1M HLA-A NAMPT CFL1 MT1F C15ORF48 RPL28 C5AR1 LCP1 H3F3B MYL12A LAPTM5 PID1 FCN1 NPC2 HLA-DPA1 MT1E NFKBIA EMP3 SLC7A11 CTSL SERF2 ATP6V0B HSP90B1 PTPRC AP1S2 CALR ITM2B TLN1 CXCL2 MYL12B RPL10 RPLP1 HLA-DQB1 SOD2 DOCK10 UBA52 LRRK2 ATP5F1E PLAUR ANPEP RPS20 H2AFY YWHAB CAP1 PKM RNF149 CTSS SERPINA1 ARHGAP18 MRPS6 ACTR2 ACTR3 EIF1 TYMP CTSZ ARPC5\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 TPT1 RPLP1 RPS12 RPL13 CYP1B1 RPS19 RPS27 RPL10 RPL28 RPS3A RPS14 RPL13A SLC7A11 RPS13 RPS23 RPS20 RPL9 RPS6 RPL29 RPL30 CXCL8 RPS24 RPS15 RPL18A RPS3 RPS21 RPS15A TMSB4X RPL37 TXN RPL11 RPL37A C15ORF48 PNRC1 RPL3 RPS7 HLA-B RPL27 STAT1 HLA-A EIF1 RPL6 RPL23A PTMA RPL23 RPL36 S100A11 RPL14 RPL39 RPL31 LTB NACA GPX4 HLA-C RPS9 UBA52 RPL24 VIM RPS29 RPL5 PTPRC SRGN RPL10A HSP90AA1 CYBA ZFAS1 RPL4 SARAF ATP5F1E SERF2 RPSA ANXA5 HINT1 NFKBIA PFDN5 HIF1A TYROBP CD3D YBX1 CSF2RA HNRNPA2B1 KTN1 NDUFA2 NEAT1 PLEKHO1 TGFB1 ITM2B TOMM7 EMP3 TMEM123 RPL38 NAMPT GBP4 GBP5 FNDC3A JAK1 SFPQ ARPC2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 TMSB4X ACTB S100A6 MT2A PTMA VIM TYROBP HLA-B FCER1G S100A4 HLA-DPA1 S100A10 HLA-DRB1 RPL10 S100A11 ANXA5 HLA-DRA HLA-C ATP5F1E C15ORF48 RPLP1 CD74 HSP90AB1 MT1H GPX4 RPS12 TPT1 C1ORF122 RPS9 LGALS3 UBA52 PRDX1 SRGN CFL1 RPS20 MT1X CYP1B1 SERF2 RPL13 ANXA2 RPS24 RPS6 RPL11 RPS19 ARPC2 EIF1 CYBA TYMP UBC HSP90AA1 YBX1 CALR NACA RPS7 RPS3A RPL28 RPL18A CTSZ AIF1 TXN PKM RPL13A RPS27 RPL3 RPL39 HLA-A RPL38 DYNLL1 RPL10A PFDN5 ARHGDIB LYZ ACTR3 TPM3 RPS29 RPS23 GAPDH CTSS RPS15 HLA-DQA1 LCP1 GBP1 H3F3A TXNIP RPL30 RPL5 RPS14 COTL1 RPL37 RPL6 RPS15A ANXA1 HLA-DQB1 GSTP1 STAT1 IL3RA PTPRE PSMA7\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 CXCL8 IL1B MALAT1 CXCL5 S100A9 NEAT1 FCER1G VIM CYP1B1 S100A11 ANXA5 CCL3 TPT1 TYROBP CXCL3 LYZ IL1A CSTB MT2A SERPINB2 SRGN SLC7A11 HLA-B ACTB IL1RN ARPC2 EIF1 C15ORF48 SERF2 HSP90AA1 MMP9 SLC11A1 HLA-DRA INHBA TXNIP N4BP1 TALDO1 MRPS6 RPL10 ARPC5 ATP13A3 SOD2 PKM PLA2G7 HBEGF CYBA CD44 CTSL NFE2L2 GLRX CFLAR HIF1A SDC2 CXCL1 PTPRE EREG PFDN5 ATP6V0B TMSB4X UPP1 ALOX5AP MCEMP1 ANXA2 TPM3 PTPN12 CCL4 CD53 FBP1 ITGAX GNG5 ATP5F1E OST4 MRC1 S100A10 YWHAZ CCL3L1 RAPGEF1 PTMA GAPDH CALM1 PRDX1 PSMB3 SERPINA1 ACTR3 AP2S1 RBPJ LGALS3 UBA52 PLAUR ITM2B SPI1 COX5B H3F3B CTSB OLR1 BACH1 TXN PSMA7 HLA-E\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 TMSB4X ACTB S100A11 S100A4 TYROBP PTMA C15ORF48 LGALS3 RPL10 HLA-DRB1 HLA-DRA HLA-B VIM TPT1 S100A6 RPS19 CD74 PRDX1 FCER1G RPLP1 CSTB HSP90AB1 EIF1 HLA-DPA1 RPS9 ARPC5 CYBA H3F3A RPL28 ANXA5 PLEK TYMP YBX1 GBP5 RPL3 ARPC2 RPS14 HSP90AA1 RPL30 NFKBIA UBA52 GBP1 RPS20 SOD2 RPL13 LYSMD2 RPS12 GNG5 PFDN5 RPS27 PSMB9 SERF2 CFL1 ATP5F1E SPI1 LCP1 CTSS PRELID1 RPL6 HLA-C RPL23 TXN PLEKHO1 CD81 GPX4 FBP1 NDUFA4 RPS23 RPL18A RPL39 RPL11 CALR CYP1B1 RPS7 DNAJA1 FCER2 H3F3B RPS24 JUND PTPRE RPS29 IL1B IL1RN RPS15 PSAP PKM LYN AKAP9 LINC02345 RPS6 VAMP8 TPM3 PSMA7 ATP6V0B PABPC1 COTL1 ACTR3 PDIA3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 TPT1 RPLP1 RPS12 RPS14 RPL13 RPS15A RPS3A PNRC1 RPL10 RPS27 TMSB4X RPL11 RPS13 RPL39 EIF1 RPS3 RPL30 RPS19 HLA-B PTMA SRGN SLC7A11 CYP1B1 C15ORF48 RPL18A RPS15 RPS23 RPL13A RPL9 RPL28 RPL14 CXCL8 RPS9 RPL5 RPL23 RPS24 RPS6 RPL37A VCAN RPL37 EMP3 S100A11 RPL24 RPS7 ZFAS1 NACA UBA52 HLA-A H3F3B RPS29 HLA-DRA SLC25A37 VIM RPL22 NEAT1 RPL29 RPL3 H3F3A RPL38 PPIF S100A10 PFDN5 CD14 RPS21 HLA-E RPSA TYROBP NAMPT PABPC1 PTGES3 S100A6 TOP1 RPL6 CD3D RPL36 UPP1 CDV3 LAPTM5 RPL31 LTB CTSL CD3E DDX5 HSP90AA1 RPS20 XAF1 TOMM7 OSM LGALS3 NAP1L1 TRIB3 MAP3K2 MAFB TXN PTPRC HLA-C RPL27 IL7R\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 CCL2 TPT1 RPS12 RPL10 RPLP1 RPL13 NEAT1 VIM RPS14 S100A11 RPL28 RPS3A S100A6 RPS24 RPS15A RPL30 RPS3 FCER1G RPS27 CYP1B1 RPL11 RPL13A RPS23 RPL39 RPS13 RPL18A RPS19 LYZ TMSB4X STAT1 RPL3 SERF2 EIF1 HLA-B C15ORF48 PTMA RPS15 IL1B ACTB RPS6 H3F3A RPL14 RPL29 NACA RPL10A UBA52 RPS7 S100A10 HLA-DRA RPL9 RPS9 RPL36 RPL5 RPL37 HINT1 ATP5F1E RPL24 TYMP RPS29 TYROBP ARPC2 RPL6 CTSB LGALS3 S100A9 HSP90AA1 HLA-C ATP6V0B RPL22 CYBA BTF3 ANXA5 RPS20 RPL27 SDCBP CD74 RPS27L HLA-DRB1 UBC RPS21 RPL36AL ETS2 RPL37A S100A4 RNF213 RGS10 CSTB CD14 MRPS6 RPL23A SLC7A11 BRI3 ARPC5 PFDN5 SOD2 RPL23 RGCC CCL3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: FTH1 MALAT1 S100A9 FCER1G ACTB CYP1B1 NEAT1 S100A11 VIM TYROBP TMSB4X HLA-B LYZ H3F3A TPT1 STAT1 H3F3B CALM1 MRC1 MMP9 ANXA5 SRGN SERF2 CSTB CYBA S100A6 ARHGAP18 HSP90B1 RPL10 NPC2 DYNLL1 ARPC2 C1ORF122 CALR TPM3 RAC1 HLA-DRA HLA-DRB1 CXCL8 C15ORF48 CTSS CD44 SLC7A11 SLC11A1 PTPRE GPX4 ATP6V0B FPR3 FBP1 ANXA2 CFL1 IL1B DAB2 S100A10 AIF1 GSN EMP3 ATP6V1G1 HLA-E CD74 GSTO1 HLA-A CTSB LCP1 SGK3 AP1S2 ACTR3 CSF1R CTSL SLC43A2 TNFRSF1B RGCC GAPDH TXN RNF213 PDIA3 LILRB2 SDCBP TYMP SOD2 VMP1 ACTR2 ZEB2 PTMA RPL28 IQGAP1 PPIB BRI3 PLXDC2 PFDN5 ITGB2 LIMS1 PDE4DIP YWHAZ SDC2 PID1 ATP13A3 ITGB1 TLN1 BID\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TMSB4X RPS27 RPS12 RPL28 RPL13 RPL10 HLA-B RPS19 TPT1 RPL13A IL7R RPL30 RPS3A RPS14 RPS3 RPL14 HLA-A RPL11 RPL39 RPS15 RPS21 PTPRC RPL37 RPL9 RPS15A RPS6 UBA52 CST7 CXCR4 RPL23A RPS20 RPL3 CD2 RPL6 SEPT7 GAPDH RPL24 HLA-C RPS24 PNISR TNFAIP3 CYBA ANXA1 RPL36 UBC DDX5 RPL18A RPL31 RPL10A RPSA EML4 VIM RPS9 RPS29 FYN RPL37A PRPF4B IL32 RPL38 CLDND1 MBNL1 HSP90AA1 RPS7 GBP5 RBM39 GSTP1 NUB1 COPS9 ATP5MG ARPC5 FOXP1 RABAC1 EIF1 ARPC2 RNASEH2B PFDN5 TOMM7 STK17A RPS23 RPL22 PTMA EIF3G SERF2 SOD1 IQGAP2 HINT1 NACA SLFN5 GNAS MSI2 CD81 NDUFV2 EIF2S2 ATP6V1G1 S100A6 CEP170 PRPF40A DDX17\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 ACTB FABP5 NEAT1 IL1RN TXNRD1 HLA-B TPT1 TYROBP LCP1 S100A11 LGALS3 SRGN TMSB4X H3F3A FCER1G RPL10 ANXA1 TXN ANXA5 CYP1B1 MFSD12 PFDN5 H3F3B PTPRE GNG5 S100A6 HLA-C CCL24 RPLP1 PTMA RPS19 SERF2 RGCC GAPDH TLN1 RPS27 ARID5B FLNA RPL6 CFL1 GCLC PLEKHO1 CCL22 GSN HOPX ATF3 NPC2 SMIM25 LYZ SDC2 SLC43A2 S100A4 ATP5F1E TALDO1 RPS14 EMP3 LIMS1 SLC7A11 GLIPR1 GPX4 JUND HSP90AB1 ARPC2 GPAT3 PLA2G7 INSIG1 TPM3 RPL36AL TXNIP DDX5 RPL30 CALM1 CD9 ITGB2 CD53 RPL37 LSP1 AIF1 ITGB1 RPL28 PKM ARPC5 HLA-E RAP1B LAPTM5 CALR RPS6KA1 GSTO1 RPL24 CYBA RPS3A ATP6AP2 RPL39 BCAP31 C15ORF48 UBC TGFB1 EIF1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 TPT1 GNLY LYZ S100A9 CYP1B1 TMSB4X RPL28 PTMA MT2A MMP9 RPL10 LCP1 RPLP1 TYROBP ACTB MT1H RPS14 ZFP36L1 RPS3 MT1X RPL13 RPS3A RPL23 VIM RPS15A ANXA5 RPS19 S100A11 NEAT1 HLA-B RPS24 RPL30 FBP1 HSP90AB1 H3F3B RPL37 RPS27 RPL18A YBX1 RPS15 MRC1 PTPRE RPL9 RPL14 SLC7A11 RPS23 RPL39 DDX5 RPL13A HSP90AA1 GSN HLA-A RPS13 LRRFIP1 RPS7 INSIG1 PKM CTSS MT1E SERF2 RPS12 ZEB2 S100A10 RPS9 EIF1 CXCL5 SLC44A1 COTL1 RPL3 PABPC1 RPL36 GNAS PID1 H3F3A RPL29 TYMP RPL11 RPL5 GIMAP7 ATP5F1E SERBP1 GPX4 UBA52 SRRM2 FCER1G PAK2 RPS20 TLN1 VCP ARHGDIB NKTR HNRNPA3 NKG7 RPL6 CYBA TPR PTPRC HSP90B1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 FTH1 CXCL5 CXCL8 S100A11 SERPINB2 S100A6 TYROBP CCL2 S100A10 ACTB CD14 CALM1 FCER1G SRGN VIM CTSL TMSB4X SERF2 TPT1 PRDX1 H3F3A HLA-B ANXA2 MRPS6 LAPTM5 EREG DYNLL1 ANXA5 GAPDH SDC2 NEAT1 EMP3 ARPC2 ANXA1 H3F3B CD300E AP1S2 ATP5F1E ATP6V0B C15ORF48 CTSZ MMP9 LMNA TYMP PKM RPL10 MAFB CFL1 CXCL1 NFKBIA ANPEP HLA-E CALR SQLE TPM3 JARID2 MARCKSL1 PTMA DDX5 C5AR1 PLP2 MYL12B CYBA ATP13A3 COTL1 PID1 RPLP1 SPI1 EIF1 NPC2 INSIG1 TALDO1 CD44 PFDN5 GRB2 TUBA1C CYP1B1 IL1B BZW1 CD53 HMGB1 IQGAP1 PHLDA1 HNRNPA2B1 PSMD8 TMBIM6 TLN1 MSN PSMA7 CHCHD2 COX7A2 ENG MMP19 OST4 HLA-C COX6A1 UQCRB UBA52 RPL30\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "Monocytes", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPS14 RPS12 RPL10 GNLY RPL13 RPL30 RPS19 TMSB4X RPS23 TPT1 RPS3 RPS27 RPL11 RPL5 RPS3A HLA-A RPL3 RPL18A IL7R RPL13A RPS15 EIF1 RPL23A RPL29 NACA RPL28 HLA-B RPL37A RPL6 RPS13 RPS6 APOBEC3G HLA-C RPL14 RPS7 EEF1D UBA52 RPL36 RPS24 EMP3 RPS15A ITM2B PTMA RPL9 RPS21 NCL RPL36AL GIMAP7 S100A6 H3F3B CALM1 CST7 S100A4 RPL27 PDE3B NFKBIA ARL4C RPL37 IL32 H3F3A GAPDH RPS20 ALOX5AP RPL39 TYROBP RPL10A RPS4Y1 DDX24 S100A10 EEF2 CD2 HLA-E RPS29 CALR ZBTB7A CLEC2B NCOR1 ARL6IP5 ANP32E KIAA1551 FTH1 SNRPD2 KDM2A RORA FIP1L1 NR3C1 PTPRC KLRC1 RPL4 HIF1A RPL22 PFDN5 NKG7 RPL24 RNF44 GOLGA4 RTKN2 TRAM1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X TPT1 RPL10 RPLP1 RPS14 RPS19 RPS3 HLA-A RPS3A HLA-B RPL28 RPS15A RPS27 RPL30 RPS23 RPS12 RPL14 RPL13 NKG7 HLA-C RPL11 RPL18A CALM1 GZMA RPS13 RPL13A RPL6 RPL5 SRGN GIMAP7 PTMA RPS21 HNRNPU RPS6 RPL23A STK17A PTPRC RPSA RPL37 ACTB ATM RPL39 SEPT7 RPS7 LRRFIP1 EFHD2 ATP5MC2 NACA RPL3 COX6B1 RPL23 NR3C1 HLA-E RPL24 PIK3R1 RPS15 UBA52 RPL37A RPS20 ACTR3 MYCBP2 RPS24 HNRNPA2B1 CAST FAM129A MORF4L1 RAP1B HMGB1 CYBA PNRC1 RPL9 RPL22 TYROBP NEAT1 KLRF1 WASF2 DAZAP2 RPL38 PYHIN1 CDKN1B STXBP3 SYNRG RHOF EEF1D COX7C MRPL22 ATP5F1D PRPF40A IER5 RPS29 ARPC2 PTGDR S100A10 AOAH DEK RPL31 RARRES3 VPS28\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TXNIP HLA-B NKG7 RPLP1 TMSB4X RPL13 HLA-A HLA-C CYBA RPL11 ARPC2 UBC RPS19 PTPRC RPL10 RPS7 H3F3B RPS15A RPS27 TPT1 PTMA SEPT7 CST7 H3F3A ZEB2 RPS3A CD247 RAP1B PNRC1 RPS12 RPL24 RPS6 RPL37 FGFBP2 RPS15 YWHAZ EMP3 RBM39 RPS23 AKR1C3 RPL30 EVL RPS3 RPL36AL RPL5 RPL27 CLEC2B PYHIN1 RPL29 RPS13 PNISR GTF3C1 S100A6 CD53 SAMD9 NACA BTF3 SP100 RPL6 EIF3A ARL4C RPL28 BZW1 CALM1 CAST HLA-E RPL13A RTN4 HNRNPA2B1 SUMO2 ACTB EIF5 RPS14 S100A4 CFL1 RPS27L OPTN UBA52 RBM17 FERMT3 C1ORF21 SRRM1 CDC42SE2 FCER1G DDX5 TPR RPL37A RAC2 CELF2 VPS4B CX3CR1 FGD3 HSP90AA1 MBP PTP4A2 DDX17 RIPOR2 C1ORF162\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: GNLY MALAT1 TMSB4X RPLP1 PTMA ACTB NKG7 HLA-A RPL10 RPS12 RPS19 HSP90AB1 HLA-B RPL13 RPL28 TPT1 RPL23A CALR RPS3A RPL37 RPS3 RPS15 CTSW RPL13A RPS24 RPS9 RPL6 RPS27 RPS23 RPL3 RPL11 RPL39 RPL10A RPL37A RPS14 RPL30 PPIA GAPDH PPIB RPS7 RPS15A HOPX RPSA RPL29 RPL18A HLA-C RPL9 VIM ARPC2 UBC IL32 SERF2 RPS13 YWHAB RPS6 RPS29 SEPT7 UBA52 RPL14 CYBA CFL1 HNRNPA2B1 ATP5F1E HMGB1 YBX1 RPS20 SRGN UBB PDIA3 GZMM HSP90AA1 PDIA6 COX6B1 IFITM2 RPS21 KLRD1 HSPA5 FCER1G CHCHD2 H3F3B HINT1 OST4 H3F3A MSN RPL22 MYL12B SDF2L1 TNFSF10 ATP5MC2 EFHD2 GZMA EMP3 TUBB FTH1 GNAS RPL24 PSMA7 TLN1 APOBEC3G ISG15\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X HLA-B RPL10 TPT1 HLA-C CCL4 RPS3A IL32 RPS12 RPLP1 JUND NKG7 RPL37A HLA-A RPL28 RPS6 RPL30 RPL6 RPS19 RPL13A STAT1 DDX5 PTMA PTPRC NACA RPS3 JAK1 RPS23 RPS27 NEAT1 GBP5 FTH1 RPL37 RPL5 LYST CREM NFKB1 UBB RPL13 DDX24 PNRC1 RPS24 RPS9 SRGN MSN PYHIN1 SLFN5 HMGB1 RPL14 H3F3B TNFAIP3 RPS13 CCND2 MORF4L1 RPL3 CNOT2 YWHAZ RPL11 PRF1 RPS15 RPS14 FCER1G RAP1B HNRNPU GADD45B UBA52 RPL10A KLRD1 BPTF NFKB2 RPS7 GNAS RBBP6 RPS21 KIAA1551 IKZF2 SON RPL23 RPL27 CHCHD2 UBC NFKBIA SRRM2 GNG2 SRSF7 REL RPL24 PFDN5 RPL29 H3F3A SRSF3 BOD1L1 WAC APOL6 HNRNPA2B1 SLC25A3 RPL18A MYL12B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY RPLP1 TMSB4X TPT1 RPL10 HLA-B NKG7 RPS24 PTMA RPS27 RPS15A RPL13 S100A4 RPS14 RPS3 RPL14 CST7 RPS7 RPS12 RPL30 RPL13A RPL37 RPS3A CYBA RPL23A GIMAP7 RPL11 TXNIP RPL28 KIAA1551 RPL6 RPS21 RPL37A KLRD1 PTPRC UBC HLA-C HLA-A UBA52 PRELID1 RPS15 NR3C1 ALOX5AP RPS19 SEPT7 HLA-E SRRM2 GAPDH RPL18A RPL3 CALM1 RPS9 RPS23 SET HMGB1 N4BP2L2 NEAT1 APOBEC3G JAK1 CTSW PFDN5 RPL38 FYB1 TPM3 DDX46 GIGYF2 RPL36AL CD247 SP100 RPL39 CXCR4 RPS6 ARID5B AKNA CFDP1 SP140L RPL29 AC245297.3 TYROBP GNAS RPS20 EEF2 NACA LAPTM5 RPL22 GADD45GIP1 GNAI2 ASH1L PAK2 LDHA RPL23 VEZF1 PRPF4B DDX6 RPL24 DDX24 H3F3B CFLAR NCL\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X TPT1 HLA-B RPLP1 NKG7 PTMA RPS3 RPL10 PTPRC H3F3A GIMAP7 HLA-C RPS19 RPL13 RPL37 ACTB ARL4C RPL14 RPL3 ARPC2 CCPG1 CFL1 RPL23A RPS3A RPL5 HINT1 RPL28 RPS24 RPL11 AES JAK1 DOCK8 SERF2 GZMA KLRD1 DDX5 NEAT1 SLFN5 UBC RBM39 HIST1H1D CYBA KANSL1 RPS13 REL CTSW TRIR RPS9 KMT2E RPS14 RPS12 EEF1D IL7R RSRP1 CMC1 RPL30 TLN1 MRPS6 CXCR4 EFR3A SRGN HNRNPU UBE2I RPL13A CCL4 PLAC8 TXNIP RPL18A NCOR1 PDE4D ELOB ZNF507 ABHD17A MXD4 SUN2 FUBP1 EP300 CORO1A EVL MYL12B CAST MSN MBP PYHIN1 PIK3R1 LDHA RSBN1L TYROBP HNRNPD SCAF11 MAX ITGB1 RPL6 LCP1 IARS2 AKNA MYL12A KIAA2026\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPLP1 HLA-B RPL10 TPT1 PTMA GNLY RPS3 HLA-A RPS12 RPS14 RPS3A RPL11 RPS9 RPS23 RPS19 PTPRC ACTB RPL13A CST7 RPS27 RPS15 RPS13 HLA-C RPL13 RPS24 IL7R RPL3 RPL28 PNRC1 RPS15A RPL23A RPL18A RPS21 RPS7 S100A6 RPL39 RPL37A EMP3 KLRD1 H3F3A NEAT1 S100A4 HSP90AA1 ARPC2 NKG7 RPL6 RPL29 HLA-E RPL14 CALM1 RPS29 HNRNPA2B1 RPL30 RARRES3 RPL5 RPS6 CYBA RPL24 HMGB1 UBA52 HINT1 CCNI SEPT7 LBH H3F3B KIAA1551 EEF1D DDX5 RPL9 NR3C1 TIGIT NACA IQGAP1 KTN1 GZMM BTN3A2 CDC42SE2 RPS20 XRCC5 YWHAB PNISR RPL27 KMT2A RPL37 SF3B1 GAPDH RPL22 ARL4C UBC STK17A CXCR4 PTPN7 APOBEC3G IFI16 TNFSF14 EML4 LCP2 SRRM2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X HLA-B NKG7 HLA-A RPS23 RPL11 RPLP1 CST7 HLA-C IL32 TPT1 RPS14 RPL10 RPL28 RPS12 HLA-E PRF1 RPL23A RPL29 RPS15A GZMA HOPX HNRNPA2B1 RPL13A CYBA SYNE2 UBC ARL4C TXNIP RPS13 RPL14 MYOM2 MYL12A RPS19 FTH1 N4BP2L2 RPS21 TYROBP UBB PCNX4 ATP5F1E TNFSF10 UBA52 HINT1 EMP3 PTPRC JAK1 FGFBP2 PRRC2C PRMT2 HLA-F EIF1 COMMD6 CDV3 RPS3A RPL13 MSN CDC42 SON PNRC1 MPHOSPH8 SERF2 RPS27 CFL1 RPL6 TAF7 GIMAP7 GBP1 GOLGB1 NEAT1 CD53 HMGB1 SQSTM1 RPL5 CLEC2B HSP90AB1 GBP2 RPL39 DDX5 SRRM1 WASF2 S100A6 HSP90B1 ATP5MPL LUC7L3 RNF213 EEF2 RPL37A RBM39 CDC26 FCER1G RAC2 OST4 PIK3R1 ABCF1 HNRNPF PTMA ZNF428\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS19 TMSB4X TPT1 RPS27 RPS12 RPLP1 RPS6 RPS3A RPL13 PTMA RPS14 RPL28 GNLY RPS13 RPL3 RPL10 RPS23 RPL5 RPL11 RPL30 RPL6 RPL37 RPS24 KIAA1551 RPS15A RPL23A RPS9 RPL14 RPS3 PTPRC ITM2B HLA-A NKG7 RPL13A UBC RPL36AL HLA-C RPL10A RPL18A RPL39 HLA-B RPL22 PYHIN1 RPS20 HNRNPA2B1 RPL9 GIMAP7 TYROBP RPL4 NACA ETS1 TXNIP RPL36 DDX5 UBA52 RPL37A NEAT1 RPS7 PRDM2 CALM1 CST7 UBB RPS15 YWHAZ IL32 RPSA FYN TCF25 OST4 SERBP1 AK9 STK4 KLRC1 STK38 RPS4Y1 CD48 PRRC2C RPL24 EIF1 CELF2 FGFBP2 EEF1D H3F3A ZNF638 ANKRD11 ARPC2 GOLGA4 RPL31 TRANK1 RPS21 PMEPA1 BCLAF1 SETX RPL38 EIF4A2 PIN4 IDS SH2D2A RASAL3\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X HLA-B IL32 ISG15 RPLP1 PTMA RPS27 RPS12 ISG20 MX1 RPS3 HLA-C RPS19 TPT1 HLA-A RPL11 RARRES3 RPS23 RPL14 RPS6 H3F3B PTPRC RPL30 SAMHD1 RPL37 HINT1 RPL23A RPL13 RPS24 GBP1 RNF213 RPL10 DDX5 STAT1 PARP14 NKG7 SERF2 NACA RPL13A RPL28 RPS3A TNFSF10 MYL12A EIF1 EVL RSAD2 RPS21 GZMA TPM3 HLA-E FCER1G RPS15A RPS14 RPL37A CTSW IKZF3 HMGB1 MSN DNAJC8 ITM2B GBP4 SP100 HERC5 APOBEC3G HNRNPA2B1 FAM133B ALOX5AP DRAP1 RPL10A RPL36AL TXNIP UTRN RPL29 RPL3 PFDN5 ACTB TAX1BP1 PPIB CST7 SLFN5 HNRNPD XRCC5 ATP5F1E RPL27 CTSC SAMD9 ARL6IP5 TOMM7 NCL SAMD9L CALR SMARCA5 CCNI CMC1 PPP1R18 LCP1 GPBP1 EIF2AK2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X TPT1 PTMA IL32 ACTB RPL13 RPL10 RPS3A RPS3 RPS19 RPL30 RPS15A RPS14 RPS12 HLA-B RPLP1 HLA-A RPS27 HSP90AA1 RPL28 HLA-C NKG7 RPS24 RPS15 NCL VIM RPS23 RPL23A RPS21 UBA52 RPL11 RPL18A RPL3 HOPX LTB NACA RPS6 RPL6 PPP1R14B BOD1L1 UBC GIMAP4 HNRNPA2B1 TRIR LCP1 RPL37A APOBEC3G DDX5 RPL38 HSP90AB1 CD2 RPS7 BTN3A2 ARPC2 PNRC1 RPS20 PRRC2C RPL27 RPL13A RPL37 ATRX HUWE1 EIF1 MACF1 GOLGB1 RNF213 RPS29 CHD4 RPL9 STK17B RPL36 GIMAP7 CFL1 PFDN5 BZW1 CTSW FTH1 TYROBP RPL24 SCAF11 FEZ1 LRRFIP1 KMT2E RPL5 GBP2 SERF2 ITM2B RPSA KLRC1 HIF1A PSMA7 POU2F2 MYL12A HLA-E BIRC3 HNRNPA3 SRSF4 ISCU\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY RPLP1 TPT1 TMSB4X RPL10 RPS19 RPS27 RPS15A RPS3 RPS14 RPL13 NEAT1 RPS24 NKG7 RPS3A RPS15 KLRD1 RPS12 PTPRC RPL29 RPL11 RPL6 RPL28 RPL14 HLA-B RPS6 RPL30 RPL23A RPL39 RPL37 RPS23 HNRNPA2B1 RPL18A RPL3 RPL13A RPS7 NACA ARPC2 RPS29 RPL36 HMGB1 MSN RPL5 PRF1 PDE4D EMP3 RPS21 VAMP8 PTMA PNN OGT COL4A3BP UBA52 PTP4A2 SEPT7 IQGAP1 NCL CYBA ARL4C RPL10A HLA-E RPSA TENT4B RPS13 HLA-F H3F3A PRPF4B NUB1 APOBEC3G CST7 PPP2R2A CYTIP EEF2 BTF3 RPL9 PNRC1 XRCC5 BTN3A2 S100A4 GAPDH LSM8 LCOR TGFBR3 PLEK RPL37A CAST NR3C1 TXNIP STK17A RPL24 DTHD1 SON DHX36 RPL36AL GIMAP4 RPS20 MYBL1 GLIPR1 PPIA\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 RPS12 RPL13 TMSB4X TPT1 RPS3 RPS19 GNLY RPS3A RPL28 S100A6 RPS23 RPS14 RPS27 HLA-B RPS24 RPL30 RPL11 RPL23A RPL37 HLA-A RPSA RPL18A RPS13 RPL3 GAPDH IL7R RPL14 RPS29 RPS21 RPS15 NACA NKG7 RPL5 RPS7 DDX5 PFDN5 RPL6 RPS15A UBA52 RPL10A VIM RPS20 RPS6 UBC CALM1 CYBA RPL9 H3F3A RPL29 RPL36 RPS9 SEPT7 HMGB1 PPIB RPL39 RPL13A FTH1 PTMA ALOX5AP RPL37A S100A4 ITM2B CFL1 RPL24 APOBEC3G PNN PPP1R14B DDX17 COX7C CAST S100A11 CLDND1 PTPRC HNRNPU ATP5MD ARL4C BTF3 NEAT1 ISCU CD3G MTDH EMP3 SON CST7 PHLDA1 S100A10 CDC42 ATP5F1E ACTB TOMM7 MYL12B RPL22 RPL36AL CD99 H3F3B CKLF EIF1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 RPLP1 TMSB4X RPS14 RPS27 RPL10 RPL13 HLA-B RPS3 RPS12 RPL13A RPS19 RPL30 RPL28 PTPRC RPS3A RPS23 RPS24 RPS15A RPL23A NKG7 RPS15 HLA-C S100A6 RPL37A RPL3 RPL24 HLA-A RPL14 HINT1 ACTB HNRNPA2B1 NEAT1 GIMAP4 RPS13 CST7 ARPC2 RPS6 RPL18A RPS9 RPS21 GIMAP7 RPL39 IL32 RPL6 RPS7 ITM2B NACA RPL29 EIF1 UBA52 RPL37 RNF213 PTMA DDX5 RPL10A RPL22 PNRC1 MYBL1 RPL5 SRRM2 PRRC2C LBH RPL27 RPS20 CALM1 GBP5 RPL38 PPIB ANXA1 EEF1D HLA-E SYNE2 RORA RPS29 GAPDH HSP90AB1 RPSA IRF2 RPL23 MSN BTF3 STK4 COX7C RAB8B ANP32E EML4 PPP2R5C FTH1 PLEK LRRFIP1 RPL9 MYL12B ATRX NFAT5 SERF2 GBP2 GOLGB1 GBP1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TPT1 TMSB4X RPLP1 RPL13 RPS14 RPL10 NEAT1 RPS3 RPL30 HLA-B RPS19 RPL11 RPL14 KLRD1 HLA-A RPS12 RPS3A RPL13A CYBA RPL24 ITM2B RPS24 RPL28 GZMA PTMA HLA-C HNRNPU PTPRC KMT2E RPS15A FTH1 HNRNPA2B1 RPS15 DDX5 UBB SERF2 NACA CDC42SE2 HSP90AA1 SLFN12L FAM107B CST7 COX8A CD247 LCK IQGAP2 PRF1 DDX24 PIK3R1 UBC RPL23A MYBL1 RPL5 CEP78 RPL37A HINT1 RPS20 RPL18A TMPO PPM1K ACIN1 SRGN GNG5 RPL36AL RPS7 N4BP2L2 RPL29 RPL3 H3F3A STK4 RPS21 ACTB RPS23 RPL9 UBA52 H3F3B JAK1 CD74 TXNIP RPS27 RPL37 STK17A TUT4 GAPDH CALM1 RPS13 CCL4 ARID4B CCT3 ATRX RPL23 ANKRD11 YWHAZ TERF2IP FLNA NCOR1 DDX17 WDR83OS\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X GNLY ACTB HLA-B HLA-A RPL10 NKG7 TPT1 PTMA GBP5 HLA-C RPLP1 RPS19 GBP1 HLA-E RPS27 TNFSF10 CCL4 MYL12A RPL13 EMP3 GBP4 RPS12 GIMAP7 NFKBIA ARPC2 HINT1 RPL18A GZMA CFL1 RPL23A RPS24 RPL11 PKM RPL30 RPL14 KLRD1 CD74 TNFRSF4 EIF1 EIF5A RPL36AL ARPC5L ATP5F1E PTPRC CORO1A RPS3A JUND UBB NACA EFHD2 RPS15 PRRC2C GAPDH UBA52 CTSW CALM1 PRF1 IRF2 RPS7 RPS15A YWHAB RPS14 RPL6 CST7 XBP1 RAC2 RPL37A RPS23 PSME1 RPS13 RPL13A TYMP SKP1 RPL9 LCP1 COX8A CD53 GSTP1 HSP90AA1 HAPLN3 SNX6 RPL28 HNRNPA2B1 CYBA SUB1 RPL39 PLEK POMP LTB RPS9 UBC H3F3B PPIA RPL3 NEAT1 SOD1 GIMAP4 RPS29\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPL10 RPS3 TPT1 HLA-A HLA-B RPL30 GIMAP7 RPS12 RPL13A TXNIP RPS14 RPS27 NKG7 RPS19 RPL13 RPS6 RPLP1 RPL14 RPL6 RPL11 FTH1 RPL5 RPS13 RPL29 RPS3A H3F3A GNLY RPS23 UBA52 PTMA GZMA RPL37 RPL28 HLA-C ARPC2 RPL23A HMGN1 RPS24 RPS15 RPL38 RPL37A RPL3 BIN2 TFDP2 S100A4 CST7 AKAP9 MYL12B SERF2 ATP5F1E RPS7 NEAT1 ARL6IP5 LINC00861 UFC1 RHOA NACA ITGA4 RPSA KLRF1 RPL24 RPL27 PSMA7 ADRM1 DHX29 TOMM7 MRPL20 MPHOSPH8 SYNE1 SEPT7 RPS15A HSP90AA1 RPS20 KIAA1551 RPL23 KLRC1 PRRC2C TTC9C RPL36 RPS21 NCOR1 GIMAP2 CAST KMT2E MYL12A SNRPB RPL22 ARPC5 NDUFS5 MYCBP2 SMARCA5 WIPI2 PTPRC EIF1 KTN1 H3F3B STK38 RAB11A\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X HLA-B TPT1 RPLP1 NKG7 RPL13 RPL37 CCL4 RPS3 RPS19 RPS12 RPL30 PTPRC HLA-A PTMA RPL18A HLA-C RPS3A RPL10 RPS13 PNRC1 RPS15 RPS24 RPS27 RPL11 RPS15A RPL29 RPL3 RPL28 ARL4C RPS14 RPS23 RPL23A RPS9 UBA52 SET RPL23 HNRNPA2B1 EIF1 RPS7 PRF1 RPL13A RPL9 RPL27 RPL14 DDX5 UBB CFL1 ITM2B TXNIP NEAT1 MRPS6 HNRNPU PDIA3 HLA-E ADAM10 JUND RPL37A SYNE2 LCP1 KLRD1 CST7 CFLAR HMGB1 SRRM2 RPL6 RUNX3 CALR ACTR2 ROCK1 DDX17 YTHDC1 FYN FYB1 ACTB NACA CALM1 SON EMP3 STK4 CDC42 H3F3A MACF1 FCER1G CIR1 YBX1 RPS6 HINT1 RPSA OST4 TMPO RPL5 HSP90AA1 ZBTB7A BRK1 SERBP1 KLRC1 PPIA\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TPT1 RPLP1 RPS19 RPL10 HLA-B RPL13 RPS27 NEAT1 TMSB4X HLA-C RPL18A RPS3 NKG7 RPL13A RPS3A RPS15A PRF1 RPL5 RPL28 RPL23A RPS24 RPS23 RPS29 RPS9 HSP90AB1 RPL30 RPS12 HLA-A HNRNPA2B1 RPS20 SYNE2 RPL11 EIF1 RPS14 ITM2B RPS6 FTH1 PNRC1 RPS15 CST7 GAPDH UBC KLRD1 UTRN RPS7 HSP90AA1 STK4 RPL9 RPL37 USP8 RPS13 GIMAP7 RPL6 SORL1 ZFAS1 NSRP1 GBP4 TXNIP PTMA C12ORF75 RAP1B PRRC2C SP110 CTSC GOLGA4 RPL29 NUCKS1 PTPRC SRRM2 S100A4 EIF4G2 RPL36AL SEPT7 RBM33 CAST RPL24 TOMM7 TMPO ARL4C JAK1 DDX46 BTF3 RBM39 PNISR NCL PYHIN1 RPL3 ARPC2 RPS27L RPL37A RPS21 ZNF91 ZEB2 ODF2L PPP1R18 MYBL1 RPL14 EIF3K\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 GNLY TMSB4X RPLP1 RPL10 CXCR4 RPL28 RPS3 PTMA RPL29 GAPDH HLA-B RPS6 RPL13 RPL6 RPS24 ANXA1 RPL37A RPS12 RPL14 CST7 HMGB1 RPS19 PTPRC RPS14 KLRD1 RPS23 RPL38 UBA52 RPS20 RPS15A RPS3A RPL18A RPS27 RPL30 NKG7 HLA-A RPL13A GNAS SH2D2A UQCRB SARAF RPL36AL RPL22 RPL36 ARPC5 RPS7 RPL5 RPL24 IFT57 UBB RPS13 RPL3 UBC CD247 ARL4C H3F3B GZMA NOP53 RPS15 RPL9 PSMA7 RARRES3 BZW1 S100A6 RPL37 TYROBP CNBP ANAPC16 CALM1 ACTB HSP90AA1 LYN RAC2 CLEC2B YWHAB LSM6 BTG3 MRPS6 ITM2B RPS9 CLTA COX6C CHST12 HLA-C CYBA GYPC RPS21 JAK1 SUMO2 RPL31 NDUFS7 HLA-E SERF2 MXRA7 RPL23A METAP2 TOX RPL11\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X RPL10 RPLP1 RPL13 TPT1 RPS19 NKG7 RPS14 HLA-B RPL13A RPL23A RPL30 RPS27 RPS6 TYROBP RPL3 RPS3 RPL28 RPS7 SYNE2 RPS3A RPL37A PTMA HLA-A RPS15A RPL37 PTPRC RPS24 EMP3 HLA-C CYBA RPS23 RPS12 CST7 S100A4 RPL18A RPL24 RPS13 EFHD2 RPL29 SEPT7 RPS29 RPL39 OPTN NEAT1 DDX5 RPS15 IKZF3 MYOM2 LTB CAST PRMT2 SET PRRC2C KLRD1 RPL14 PRF1 NFKBIA TXNIP CFL1 H3F3B SERF2 PNRC1 RPS9 RPL23 HLA-E MPHOSPH8 UBA52 H3F3A RPL5 SLFN5 ATRX RPL36AL PTPRE SON RPL6 FCER1G RAP1B TRIR HNRNPA3 RPS20 MSN UBB RPS21 COX7C PIP4K2A ACAP1 RPL9 MBP MYH9 RAC2 NEMF SF3B1 ATP5MF ITGAL SERBP1 RPL27 APOBEC3G\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X RPL10 RPS3 HLA-B RPLP1 RPL28 RPL13 TPT1 RPL30 RPS14 RPL18A HLA-C HLA-A RPS19 RPS15A RPS6 PTMA NKG7 CALM1 GIMAP7 RPL3 RPL29 RPS12 RPS3A NFKBIA RPL24 RPL9 RPS15 EMP3 HSP90AA1 CYBA UBC RPS20 RPL6 AES S100A4 RPL14 RAP1B CFL1 RPL23A RPS24 TXNIP ITM2B MYL12A PRF1 RPS23 RPS7 ATP6V1G1 TES SCAF11 S100A6 ARL6IP5 GNAI2 FTH1 RPL36AL XRCC5 OPTN SOD1 GZMA RPS9 KLF6 PPIA PTPRC NCL STMN1 PIM1 BTN3A2 RPL27 ARPC2 TYROBP CST7 EIF1 PSMA7 EVL SMARCA5 TAPBP RBL2 RPL39 TOMM7 NRBF2 SARAF MYL12B NEAT1 BROX VAPA RPS13 NAP1L1 TRIR RHOA ANXA1 PLAC8 ATP5MG IFITM2 KLRD1 HLA-E RPL13A STK17A RHOC\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPS19 GNLY TMSB4X RPLP1 NEAT1 RPL10 RPS27 HLA-A PTMA RPL28 RPS3 TPT1 RPL13A RPL13 CMC1 ACTB RPS24 RPL36 GIMAP7 RPS15A PTPRC ITM2B RPS14 RPS15 PYHIN1 HLA-B RPS7 RPL37 PNISR FCER1G H3F3A RPL30 KLRD1 RPS23 EVL STK4 RPS3A CLEC2B CST7 HLA-E RPL24 SP100 LCP1 RPS12 RPL11 FYN STK17A NKG7 NACA PIK3R1 JAK1 RPL23A COX7A2 RPSA RABAC1 APOBEC3G RPL37A RPS13 TYROBP HSP90AA1 SRGN ALOX5AP RPL10A SNRPD2 RPL18A KMT2E MYCBP2 RPL29 RPL6 IL32 PNRC1 CALM1 HAVCR2 RAC1 MYL12B CD81 PSME1 RPL5 EIF1 CYBA RARRES3 KIAA1551 ZRANB2 UBA52 EFHD2 MBP MSN SCAF11 YWHAB RPL23 PPIA REST RPL27 ORMDL1 RPS6 SET EEF2 RSRP1 SRSF11\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X GNLY RPLP1 PTMA TPT1 HLA-B CYBA PTPRC RPL13A RPS12 NKG7 HNRNPA2B1 TXNIP RPS14 OPTN RPL13 RPL10 RPS3 RPS3A RPS27 RPL14 HMGB1 RPL6 CST7 RBM39 HLA-A ATM SYNE1 RPS24 NACA RPL11 TYROBP CLEC2B RPS7 RPS13 RPL29 GIMAP7 RPS6 ITM2B RPL23A GOLGB1 KLRD1 PRDM2 NR3C1 UBA52 RPL24 HSP90AA1 SKIL SF3B1 ARL4C PSME1 ARPC5 RPS19 RPL18A RPS23 RPL30 HLA-C PNRC1 RPL3 SERF2 PSMA1 SETD2 DNAJB6 CFL1 RPL39 MSN DNAJA1 UBC LUC7L3 CXCR4 GZMM RPL37 KANSL1 ACTR2 METAP1 S100A6 CAST FAM49B USP7 SLFN5 HLA-F RFC1 DDX17 C1ORF21 RPS15 EFHD2 SKAP1 DNAJC8 RPS15A SPEN FNBP4 VIM CCL4 RPL28 RPS9 ACAP2 SEPT7 ACTR6 CD53\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X RPL10 RPLP1 RPL30 RPS12 RPS19 RPS27 HLA-B PTPRC NEAT1 RPL29 RPL13 ACTB TPT1 PTMA RPS14 RPL13A RPL28 S100A4 RPS24 RPL37A HLA-C CALM1 RPS23 RPL14 RPL5 GAPDH RPS15 RPS9 RPS15A RPL6 ABCF1 KIAA1551 RPL18A RPL11 RPL36AL MYOM2 VIM RPS3A RPL3 SUMO2 H3F3B CYBA CD247 RPS20 RPS3 KMT2A RPS13 SRRM2 HNRNPA2B1 UBC KLF13 ARPC2 RPL36 RPL27 DEF6 PITPNC1 SF3B2 PSMA7 EEF1D HNRNPU PKM PPP3CA EFHD2 IFITM2 RPSA HLA-A ATP5F1E UBXN1 PSMD12 SON RPS21 YY1 UBR2 NACA PFDN5 UBA52 ATP5IF1 MACF1 SLFN13 NSD1 DDX17 TGFB1 UTRN DDX5 MYH9 DDX46 SET ZRANB2 LCP1 SKIL DEK NAP1L1 RALBP1 RPL23A HINT1 HLA-E RORA\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 TMSB4X GNLY RPL10 RPS19 RPS14 RPS3 RPL13 RPS3A RPS12 RPL30 RPS27 RPL3 ACTB RPL13A RPS23 RPS15A RPL6 RPL28 RPL29 HLA-B RPL11 RPL18A NACA RPS9 RPS15 PTPRC RPL39 RPL14 CXCR4 RPS21 PTMA RPS6 SLC25A6 SH2D2A CYBA NKG7 RPL9 RPS24 TYROBP RPL23A RPS7 RPSA RPS13 UBA52 PIK3R1 NFKBIA HOPX SEPT7 GAPDH EEF1D SNX6 STK4 RPL5 RARRES3 HINT1 TXNIP N4BP2L2 RPL37 STK17B RPS29 XRCC5 RPL38 JAK1 ISG20 LYST COX7C RAB11B CD96 CD247 RPL22 ADSS MYBL1 TRIM56 ITGB2 RPL37A MYL12B CST7 MT2A GPRIN3 N4BP2L1 PFDN5 GZMA RORA KTN1 VPS28 RAC2 PNRC1 RPL36AL BPTF HLA-E HLA-A NCL RPS20 CTR9 IFI16 KATNA1 TNRC6B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X RPLP1 RPL13 TPT1 RPS12 HLA-B RPL10 NKG7 RPL28 HOPX HLA-A RPS27 RPL30 RPL9 RPS3A RPS24 RPS23 CAST RPS19 RPS14 RPS6 RPL11 PTMA NEAT1 RPL6 RPL18A TXNIP RPL13A HSP90AA1 HLA-E RPL3 RPS7 SEPT7 RPL5 RPL14 MYBL1 RPS15 RPL37 HLA-C GOLGB1 ACTB CST7 H3F3A GNPTAB APOBEC3G ARPC2 HNRNPA2B1 SYNE2 S100A6 LUC7L3 TYROBP RAP1A UBA52 RPL36AL TLN1 MYL12A HSP90AB1 RPL37A SET SERF2 GSTP1 ITM2B HMGB1 PNRC1 NPM1 BIRC3 CTSW RPSA RPS9 RPS20 CFL1 CHCHD2 SMCHD1 HNRNPK NR3C1 PLEK HINT1 CYBA HNRNPU PTPRC CD247 CDC42 UBB PAK2 LITAF IGF2R COX7C LBH CALM1 LCP1 PNN ELF1 GNAL CTSC RAMP1 SRRM2 AKAP13 NACA\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X GNLY RPLP1 TPT1 RPL10 RPS19 NEAT1 HLA-B RPS27 RPS14 RPL13 RPS12 PTMA RPL30 RPL18A RPL28 RPS3 RPS24 RPS3A NKG7 KLRD1 CFL1 ARPC2 RPS23 RPL13A RPL37 HLA-A PRF1 RPL36AL GNG2 TCF25 H3F3A GIMAP7 MYO1F RPS15 DDX17 RBM39 TXNIP RPL14 RPL37A PARP14 UBA52 NR3C1 CLEC2B RNF213 RPL38 CD247 HLA-C RPL6 ACTB GZMA ITM2B RPL29 RPL11 HLA-E NACA TYROBP SERF2 LEPROTL1 PDIA3 PTPRC TLN1 AC245297.3 FMNL1 CXCR4 CCSER2 SLCO3A1 TOMM7 HLA-F ARL4C CLIC3 GSTP1 CST7 STK4 MIER1 KLRF1 DDX46 RPS15A SEPT7 EFHD2 RPS7 RPL5 IVNS1ABP DYNLL1 ZBTB44 RORA GPX4 SP100 CYBA PRRC2C RPS9 KMT2E GAPDH RPL9 BPTF SH2D2A LDHA RPL27 CFLAR\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TPT1 TMSB4X RPLP1 RPS14 RPL10 RPL13 RPS12 RPS19 HLA-B RPL37 RPS3 ANXA1 RPS15A RPL23A RPL14 RPS27 RPL29 RPS3A RPS13 KLRD1 PTMA RPS23 S100A4 RPL18A HOPX UBA52 RPL39 RPL11 RPL6 RPS7 STK17A CD2 CALM1 RPL30 RPL9 RPL3 RPL13A RPL36 RPL31 PNRC1 SET IFITM2 NCL HLA-A SON MSN RPL27 SEPT7 GIMAP7 PARP14 RPS6 UBC YBX1 RPL28 CST7 RPS15 TPR HLA-E MYBL1 SRGN RPL36AL RPS20 PTPRC EIF1 SUMO2 ARPC2 FYN IFI44L ISG20 SRPK2 RPS9 XBP1 KLRG1 S100A11 PPIA KLRC1 ARL4C CALR HSP90AB1 LCP1 HLA-C RPL5 PSMA7 HNRNPA3 HINT1 KMT2E LINC00861 JUND AKNA JAK1 KIAA1551 TYROBP NACA NFKBIA RPL24 AC245297.3 IL2RB TAX1BP1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY RPLP1 PTMA TPT1 TMSB4X RPL10 RPS19 RPL13 RPS12 RPS27 HSP90AB1 RPL28 CD2 RPL3 HLA-B HLA-A RPS7 RPS14 RPL13A GAPDH RPL11 NKG7 IL32 RPL30 RPS3A RPS23 RPL37 RPS3 RPS24 KLRD1 RPL6 RPS6 RPL5 RPL23A RPL18A RPL10A RPS13 NPM1 RPS15A RPS15 TNFSF10 VIM RPSA HSP90AA1 YBX1 RPL14 HNRNPA2B1 KLRC1 HLA-C ACTB LDHA ATP5F1E RPL9 AHI1 RPL37A RPL22 NACA RPS9 EIF1 ARL4C RPL39 RPL27 APOBEC3G PPIA HNRNPU SERF2 GPX4 UBB UBA52 EMP3 GIMAP7 CALM1 RPL29 DEK NCL SRGN RPL4 SLC25A6 FTH1 TNFRSF18 CDK6 FABP5 RPL24 CLEC2B RPL36AL UBC H3F3A HNRNPA3 PSMA7 RPS21 MSN RPL36 PGGT1B GSTP1 PTPRC TYROBP CTSW GNAS DDX17\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X HLA-B NEAT1 PTMA HLA-A NKG7 RPLP1 HNRNPA2B1 MRPS6 RPL10 TXNIP RPS19 MYBL1 SRGN H3F3B RPL28 UBB RPL6 RPS15A KLRC1 TPT1 MSN RPL36AL HSP90AA1 ITM2B PNN TLN1 CMC1 HLA-E PSMA7 CYBA SRRM2 GZMA PTPRC S100A10 JAK1 TPM3 HLA-C RPL13A BCLAF1 SEPT7 STK17A PHF3 PRF1 DDX5 ANXA1 DNAJC8 H3F3A CHCHD2 RPS12 EIF1 ATP5F1E CST7 FTH1 RPL13 PLEK SLC38A2 IKZF1 SELENOW SEPT6 GIMAP7 RPS3 RALBP1 SRPK2 NCL RPL30 EIF5 RORA PLAC8 RAC1 STK4 LUZP1 PNISR RPS15 RPS24 BTN3A2 SUN2 DDX17 SETX KLRF1 PIP4K2A PCNT COX7C ATM UBC OTUD6B-AS1 DNAJA1 CSK PDE4D FAM107B TUT4 FKBP2 SF3B1 IFITM2 RPL37 ATP2B4 ELOB PYHIN1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X TPT1 PTMA TYROBP HLA-B RPLP1 RPS14 RPS27 CCL4 RPS19 RPS3 RPL28 PTPRC HLA-A NKG7 TXNIP RPL10 RPS12 RPL13 RPL6 HLA-C RPL30 RPL37 RPS15A RPS3A CST7 RPL37A HLA-E RPS6 CYBA RPL11 MYL12A S100A4 ARPC2 FCER1G CAST FGFR1OP2 CCNI SYNE2 GZMA PRF1 LBH RPS23 SERF2 OST4 RPL14 IQGAP2 ARL4C GTF3A UBA52 RPL13A CD74 RPS21 GIMAP7 APOBEC3G RPS24 SET STAT4 ITM2B FTH1 IKZF3 JAK1 RPL39 EMP3 KLRD1 HMGB1 MYBL1 CSNK1A1 RPL18A RPL36 RPL38 AES CTSW RNF213 RARRES3 RPSA GNPTAB RPL10A HNRNPA2B1 CAMLG RPL22 SLC38A2 H3F3A EIF5A PSME1 PYHIN1 CLEC2B RPS7 SRSF5 PARK7 XRCC5 UBC PRELID1 EIF1 PSMD8 HERC1 MSN HIPK2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X GNLY RPLP1 TPT1 RPS27 RPL13 RPS14 RPL30 NKG7 RPS12 RPS3 RPL28 RPL14 RPS19 RPL27 PTMA RPL10 RPS6 RPS23 RPS24 SERF2 HLA-A KLRD1 ITM2B RPS3A RPS15A RPS13 CXCR4 PRRC2C HLA-B RPL36AL RPS29 RPL18A RPL29 UBA52 S100A4 RPL13A HLA-C PNRC1 RPL6 GIMAP7 RPS9 JAK1 PTPRC RPL11 RPS7 H3F3B HOPX UBC RPL37A GBP5 SEPT7 RPL5 PAXX RPS15 RPS20 RPL39 CFL1 RPL37 RAC1 NCK1 DDX46 BOD1L1 MSN STX16 ARL4C H3F3A ATP5F1E MRPS6 APMAP SON RPL10A RPL24 NACA HLA-E MRFAP1 SRGN RPS21 SUMO2 LSP1 CHCHD2 RPL23A KLRC1 PRF1 IFI16 RPL3 EIF4A2 CXXC5 DYRK2 LUC7L3 CYCS AKAP13 SP3 CCDC66 CDC37L1 DSTN C9ORF16 FLOT2 C19ORF25\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TPT1 TMSB4X GNLY RPLP1 RPL10 RPL13 RPS14 RPS27 RPS19 RPS12 RPS3 RPS3A RPL30 RPL13A HLA-B PTMA RPS21 RPS15 RPL3 RPL28 RPS15A HLA-A RPL18A RPS6 NKG7 RPL24 ITM2B RPL37 RPS7 RPS23 FTH1 UBA52 RPS24 RPL14 RPL23A CXCR4 PTPRC KLRD1 RPS9 TXNIP CALM1 GIMAP7 RPL29 ACTB RPL39 ATM RPL10A RPL5 RPSA RPL31 HNRNPA2B1 ATP8A1 CST7 RBM39 SRGN RPL11 PNRC1 RPL6 DDX17 RPL9 HLA-E KLRC1 RORA RPS29 SON UQCRB HMGB1 CD247 PAK2 RPL36 HSP90B1 BBX PFDN5 UBC SEPT7 PIK3R1 H3F3A TRIR JAK1 RPS13 KMT2E HLA-C RPL22 HNRNPA3 RPL37A FGFR1OP2 SRP72 BTN3A2 ACTR3 RPS20 TOMM7 H3F3B DNAJC8 EEF1D DDX46 IL18RAP NCL MPLKIP YWHAZ\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TPT1 RPL13 RPS12 TMSB4X RPL10 RPS3A RPS14 RPS15A RPL3 RPL18A RPS23 RPL30 RPL28 RPS27 RPL11 RPS19 RPL37 RPS3 RPL13A RPL39 RPS6 RPL14 HLA-B RPS15 RPL29 RPL9 RPS7 PTMA RPL6 RPL24 RPSA RPS24 LTB RPS13 RPL27 RPL10A RPS21 NACA RPL37A RPS9 UBA52 RPL5 HLA-A RPL23A RPL22 RPS29 FTH1 H3F3A RPS20 HLA-C RPL36 EIF1 RPL38 HSP90AA1 IL7R ACTB RPL23 CD3D GIMAP7 PNRC1 SARAF COX7C HLA-E PTPRC SEPT7 SLC25A3 STK17A SERF2 ITM2B GNLY LEPROTL1 ARID5B EEF1D TOMM7 UQCRB JUND ATP5F1E YWHAB IL32 UBC PPIA BTF3 CALM1 SAP18 CD2 RPL31 YBX1 CMC1 FYN SUMO2 ATP6V0E1 UBB PFDN5 PSMA7 GIMAP4 CLEC2B PRPF38B MYL12B\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY RPLP1 TPT1 TMSB4X RPS3 RPS27 RPL10 RPS12 HLA-B RPS3A HLA-A RPS15A RPL13 RPL13A RPS14 RPL14 S100A4 NKG7 RPS19 RPL28 RPL39 IL32 RPL30 RPS23 RPL18A RPL3 RPL11 PTMA RPL6 RPS24 HLA-C VIM RPL37 S100A6 RPSA RPL24 PTPRC RPS15 ARPC2 RPL23A RPS21 RPL37A RPS6 CD3G RPL9 ACTB RPL29 CCL4 ARL4C UBA52 PFDN5 MYL12B FTH1 ITM2B MBP RPL36AL HLA-E CALM1 RPL23 RPS7 RPS20 UBC NACA TLN1 HMGB1 S100A10 RPL38 BIRC3 CAST RORA APOBEC3G RPS9 CD3E EMP3 COMMD6 RPS13 CFL1 SON KIAA1551 SERF2 CST7 KANSL1 SP100 HSP90AB1 TC2N PNRC1 CTSW CCNI NUCKS1 JAK1 RPL36 PRF1 KLRC1 HOPX ANXA1 STK4 CD226 PKM EEF1D\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X HLA-A RPLP1 HLA-B RPS19 FTH1 TPT1 RPL28 RPS12 RPS3A PTMA TXNIP RPL13 RPL30 RPS23 RPL10 RPS27 CD247 RPS14 RPS24 RPL11 RPL24 RPS3 PTPRC HP1BP3 RPL23A TAX1BP1 RPL39 GIMAP7 S100A4 RPL3 RPS20 RPL37 MPHOSPH8 RPL37A UBA52 RPS7 MACF1 PNRC1 HLA-E STK4 MBP CASP8 RPL31 UBB CCDC12 YWHAB RPS15A SYNE2 NEAT1 ATM H3F3A LCP1 RPL6 CREBRF CAST SON RPL13A ERN1 HSP90AA1 ACTR2 RPL5 PSME1 CALM1 SLFN5 CYBA PRF1 LBH EEF1D RPS6 EIF1 KLF13 RPL29 RPS9 KAT6B JAK1 PCGF5 ABAT RPL10A CMIP HNRNPDL SRSF5 N4BP2L2 ATP5MG ATP5IF1 ARPC2 RNPS1 CLINT1 ATP5PF FYN IQGAP1 ATP5F1E BTN3A2 CCL4 PAIP2 RPL18A RPS21 ARL4C\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 TMSB4X RPS12 RPLP1 RPL10 TPT1 RPS19 RPL13 RPS23 RPL28 RPS14 RPS27 RPS3 RPL30 RPL29 RPS7 RPL5 RPS21 RPS3A CD2 RPL39 RPL13A RPL37 RPS6 IL32 RPL37A ACTB GAPDH HLA-B RPS9 RPS15A RPL14 RPL18A PTMA PPP1R14B RPL23A RPL11 BIRC3 RPS20 SLFN5 VIM RPL27 RPS24 RPS15 RPS29 RPL6 RPS13 PFDN5 NKG7 UBC HLA-C RPSA RPL24 RPL9 S100A6 CYBA RPL36AL PAXX PTGES3 NACA S100A4 SP100 HLA-A HSP90AA1 NEAT1 HNRNPA2B1 SYNE2 PTPRC RPL31 HSP90AB1 SRGN CLDND1 STK4 TBL1XR1 APOBEC3G IL7R SERBP1 YWHAZ CXCR4 JAK1 ITM2B LCP1 NPM1 RPL3 EEF1D NCL MRPS6 NDUFA1 RPL23 PABPC1 SCAF11 RGCC PAK2 PRPF8 RPS4Y1 H3F3A TOMM20 STK17A UBE2D3 N4BP1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X RPS19 RPLP1 RPS15A RPS3 TPT1 RPL29 RPS27 RPL13 RPL10 RPS24 RPL28 RPS3A RPL6 RPS14 NKG7 RPS6 HLA-B RPL14 CCL4 RPL36 RPL13A RPS12 RPS15 PTMA RPL3 CST7 RPS23 RPL11 HLA-A ISG15 RPS21 RPL24 RPL37A PNRC1 RPL30 RPS9 TOMM7 HLA-C RPL37 RPS4Y1 S100A4 CYBA RPL9 EEF1D CD48 UBA52 ACTB SRGN HLA-E H3F3A GAPDH MSN RPL36AL RPL39 PARP14 GIMAP7 RPS7 FAM200B CFL1 GZMA GBP5 RAD21 TNIP1 GMFG RPS20 JAK1 HNRNPA2B1 EPSTI1 TM9SF3 BAG1 UBC ISG20 ALOX5AP CALM1 IKZF3 SERF2 RPL31 SON TYROBP PRRC2C PRF1 IRF2 RARRES3 STX6 RPL18A RPL23A ARL6IP5 FTH1 RBPJ BIN2 CALR DGKD ARHGAP25 RNF213 IQGAP1 HIF1A DDX3Y\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY RPLP1 TPT1 RPS24 TMSB4X RPS3 RPS15A RPL30 RPS14 RPL13 RPS12 RPL10 RPS23 RPL37 RPS19 S100A4 RPL5 RPL29 RPS27 RPL28 RPS7 RPL6 HLA-C HLA-B RPL14 PTMA IL32 NKG7 SEPT7 HLA-A NACA RPL24 DDX5 RPL11 RPS3A SYNE2 CCL4 PTPRC RPL39 RPL3 PNRC1 RPS15 ZEB2 RPL4 GBP5 RPS9 RPS20 UBA52 RPL13A ATP5MG RPL9 KIAA1551 EEF2 NR3C1 FTH1 ARL4C RPS6 RPL23A FNBP1 RPS13 ACTB RPL37A EIF3K RPL18A APOBEC3G RNF213 HSP90AA1 NFKBIA ARL6IP5 GBP1 ATRX EIF1 PRELID1 RPL27 SERF2 ZC3HAV1 AKAP13 IER5 BRD7 PRF1 ZBTB1 TYROBP ASH1L CFL1 JAK1 CAST MYL12A SH2D2A LUC7L3 NCL KLRC1 CFAP97 RBM39 TAF7 TRIR CD247 GBP4 GAPDH SNRPG\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X RPLP1 HLA-B RPS19 TPT1 NEAT1 RPL30 S100A4 RPL14 HLA-C RPL13 RPL28 RPS27 RPS14 DDX5 CFL1 RPS12 HLA-A H3F3A RPS21 SEPT7 NACA RPSA HNRNPU RPL18A IL32 NFKBIA SYNE2 RPL37 ITM2B RPL10 RPL11 NKG7 RPS23 MRPS6 RPL37A ARAP2 EMP3 TXNIP UBC ARL4C PTMA HNRNPA2B1 ANXA1 RPS6 NCL S100A6 RPL23A SLFN5 RPS3 RPS7 STK17A SUMO2 RSRP1 RNF213 RPL9 LUC7L3 RPL6 RPS15 EIF3K ZFP36L1 CST7 MYO1F DDX17 CAST RPS15A CD53 GOLGA4 H3F3B CD247 RAP1B TLN1 TGOLN2 YBX1 BTF3 MYL12B DEK SRRM2 RORA UBA52 NAP1L1 ARID4A RAB8B COG2 EVL PRF1 CD37 PRPF40A SET EIF4G2 RPL36 HLA-E SON UBA6 UQCRB RPL23 MAN1A1 RPL31\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X RPLP1 RPS3A RPS27 RPS19 RPS3 HLA-B RPL28 RPL30 NEAT1 RPL10 KLRD1 TPT1 PTMA RPL37 RPS14 DDX5 RPL14 HLA-A CD247 RPS23 LCP1 RPS24 SYNE2 RPL6 GZMA RPS15A RPL24 CCL4 UTRN PTPRC NKG7 RPL11 HLA-F HLA-C RPL3 UBA52 MBP RPL29 MYL12A RPL27 RPL18A RPL13 RPS12 H3F3A RPL5 PRF1 RPL13A TCF25 HNRNPU SEPT6 NKTR FTH1 ACTB IQGAP1 CD69 SLFN5 RPS7 H3F3B ITM2B ZRANB2 HP1BP3 RPL22 CHST12 RPL37A RPS13 SORL1 RPS9 RBM6 ARL4C HLA-E RPL38 RPL23A RPS15 JAK1 RPS6 DDX46 MSN VPS28 RPL36 CALM1 TXNIP PRMT2 PYHIN1 PLEK GZMM KIAA2026 EIF1 RPS29 HNRNPA2B1 EEF1D CD46 RPS4Y1 SEPT7 AOAH ARID1B NOP53 RBL1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: GNLY TMSB4X TPT1 RPLP1 HLA-B RPS19 RPS3 RPS12 RPS14 RPL13 RPS3A PTMA RPL10 TXNIP RPS27 GIMAP7 RPS15A RPS23 MALAT1 RPL6 RPS24 HLA-A RPL29 RPS6 NACA RPL3 UBA52 IFITM2 RPL37 CST7 RPL30 RPL9 RPL13A FCER1G PTPRC RPL14 SEPT7 SARAF RPL36AL PPP1R2 RPL11 RPS9 PNRC1 RPL24 SON CALM1 GAPDH FYB1 JAK1 TYROBP EIF4A2 H3F3A RPL37A ANXA1 SERBP1 NCL SSR2 RPL23 HLA-C RPS7 GZMA PRRC2C SRSF4 DNAJA1 NKG7 C1QBP HNRNPA2B1 GLRX CD2 SET PTPN4 EIF5 MYL12A KLRD1 ATP5MG HLA-E VASP KLF6 EIF5A HOPX RPS20 RPL10A PAK2 CALR RPL5 NDUFA1 EIF3K UBB PRF1 STK17A RNF213 CD247 HSP90AA1 FTH1 RPS21 AES RPS15 HNRNPH1 PHF20L1 SPN\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY RPLP1 TMSB4X TPT1 RPL10 RPS12 RPL28 RPL13 RPS19 RPL13A RPS27 RPS14 RPL11 PTMA RPL18A HLA-B ACTB RPS15 RPS7 RPS3 RPS15A RPS6 RPL14 RPS3A NKG7 RPS23 RPS24 RPL3 CFL1 RPS29 RPS21 HLA-A NACA RPL9 NEAT1 RPL30 RPL6 RPS13 H3F3A RPL24 RPL23A RPL39 RPSA RPL27 RPL37A BTF3 GZMA CD2 RPL29 RPL23 UBA52 HLA-C IL32 APOBEC3G ARL4C CYBA KLRC1 ATP5MG MYL12A S100A6 RPS20 SERF2 RPL37 PSMB9 HMGB1 VIM RPL38 ARAP2 RPL36AL RPL5 CALM1 GPRIN3 CALR ALOX5AP SEPT7 HNRNPA2B1 U2SURP TPM3 COPB1 N4BP2L2 ARPC2 PPIA CXCR4 HLA-F LTB H3F3B NCL MRPS6 ATRX CD48 HSP90AB1 EPC1 PARP14 CDC42 DHX9 CLEC2B MACF1 NT5C2 CTSW\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: GNLY MALAT1 TMSB4X HLA-A ACTB RPLP1 HLA-C RPL13 PTMA PTPRC RPL10 GBP1 HLA-B IL32 TPT1 RPL28 RPS3A RPS23 RPS15A NKG7 CST7 RPS24 TNFSF10 GIMAP7 RPS14 EIF1 RPS15 RPL30 RPS12 RPL24 RPL6 APOBEC3G S100A4 DNAJA1 NACA RPS6 STK17A RPS3 GZMA GBP5 FCER1G RPS27 RPS9 RPL13A RARRES3 MYL12A NFKBIA HLA-E RPL23A CALR TYROBP RPL11 CYBA JUND RAMP1 SERF2 UBA52 RPL14 RPS20 EFHD2 GAPDH RPL5 IFITM3 ISG20 RPL37A RAP1B PFDN5 HSP90AA1 TYMP RPL29 ARL6IP5 HLA-F HINT1 NFKB1 PSME1 FEZ1 SFPQ PRPF38B PSMA7 TOMM7 COX7C RAB27A CTSW PRF1 MYBL1 HSP90AB1 RPL36AL NEAT1 ITM2B CFL1 KLRD1 ISG15 RPL10A BTF3 H3F3A ADGRE5 ZFAND6 SRPRA PPIA GBP2\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TMSB4X RPL10 RPS19 TPT1 CCL4 RPL13 RPS27 RPS12 RPS23 RPL30 IL7R RPS3A RPS14 RPL28 RPS3 GNLY HLA-B RPL11 RPL18A IL32 RPL13A PTMA RPS7 RPL37 RPL3 RPS15A RPS24 UBA52 RPL9 HLA-A RPS13 NACA RPS15 RPS21 S100A4 HMGB1 RPS6 RPL6 RPL23A RPL14 GIMAP7 RPL27 RPL24 NKG7 RPSA ITM2B CALM1 RPL29 CST7 RPL39 HLA-C ARL4C H3F3A LTB FTH1 RPL36 RPS29 RPS20 CCL3 PNRC1 PTPRC AES CCL4L2 SRGN RPL5 TXNIP CYBA SEPT7 JAK1 HLA-E RPS9 LCP1 RPL31 YBX1 PRRC2C RPL38 S100A10 ELF1 RPL23 KLRD1 MYL12A HNRNPA2B1 RPL37A S100A6 EEF1D CD247 RPL22 DDX5 AKAP9 GNAS SF3B1 ATP5MG ARPC2 ARHGDIB PPP2R5C PFDN5 NCOR1 CYLD\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 RPL10 TPT1 PTMA RPL13 RPL11 RPS23 PTPRC RPS19 RPL13A RPS12 RPL3 RPS27 RPL6 RPS3 RPL28 RPS3A RPS15A RPS6 RPL30 RPS14 RPL29 HLA-A RPS13 RPS20 RPL9 TMSB4X RPS21 KLRD1 RPS9 RPL14 RPL23A RPL10A DDX5 RPL37A HNRNPU NACA RPL37 RPL23 RPS15 H3F3A RPL5 RPL18A H3F3B RPS29 TNFRSF18 AKAP13 HLA-B RPL39 HNRNPA2B1 KIAA1551 PNRC1 ACTB JUND LYST CLEC2D RPL38 ITGA4 MARCKSL1 PPIA HLA-C CLEC2B MBNL1 RPS24 CFL1 SMAP2 MYL12A ATRX EEF1D SKP1 CREM GBP5 PRKCH PABPC1 UBB S100A4 RPL27 KMT2E IRF2 RPL31 CHD4 CCDC69 KMT2C RPL24 HNRNPDL ANAPC5 CCNI NCL HSP90AB1 MSN FTH1 RPSA CFLAR FYB1 CD3G TNFRSF4 ANKRD28 ZC3H13 TOMM7\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 RPLP1 TMSB4X HLA-B RPL10 GNLY NKG7 PTPRC RPS3 RPS27 PTMA RPS12 RPS19 RPL11 RPS14 RPL13 RPS3A RPL23A TPT1 GZMA RPS23 PRF1 TXNIP RPL37 RPS6 RPL18A CST7 RPS20 H3F3A RPSA RPS15A RPL9 HLA-A UBA52 FGFBP2 RPL13A RPL27 CYBA RPL28 RPL14 RPS24 RPL10A SRGN HLA-E CD247 SP100 RPS9 RPS21 HLA-C RPS15 RPS13 FTH1 KLRD1 RPL29 RPL36AL FYN CAST ITM2B COX7C HIPK2 NCL UPP1 STK17A RPL3 HMGB1 HNRNPU MYL12A PLEK SUB1 S100A4 RPL5 RPL22 RPS7 C4ORF3 IQGAP1 RNF213 PIM1 PNRC1 PCBP2 RPL39 TMED9 SH3GLB1 RPL30 RPL37A UBC CLEC2B MGAT4A GMFG GIMAP7 TCF25 EEF1D GNAI3 DYNLL1 TAGLN2 CCNI SMARCA5 JMJD1C CHCHD2 ZEB2 PLEKHO1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]
[ { "content": "You are an expert who knows a lot about single cell biology and genomics and will help me solve a series of tasks related to single cell data analysis.", "role": "system" }, { "content": "Below is a list of {gene_names} ordered by descending expression level in a single-cell CITE-seq sample. Your task is to select one cell type to which this cell most likely belongs from the following candidate cell types: {cell_types}. Make your choice in format 'Final Answer: Prediction'.\n{gene_names}: MALAT1 GNLY TMSB4X NEAT1 NKG7 HLA-B RPLP1 RPS27 TPT1 RPL10 RPS19 RPS12 HSP90AA1 RPL5 CALM1 SYNE2 TXNIP RPS23 S100A4 RPL13 HLA-C UBC RPS15 RPS14 PTPRC RPS3A RPS20 CST7 RPS7 RPS15A DDX17 H3F3A RPL29 PSME1 ACTB EMP3 PTMA RPL13A RPS9 RPL30 CAST RPL6 RPL18A GIMAP7 S100A6 MYH9 KLRD1 CYBA SAMD9 RPL11 SUMO2 CFLAR VPS13C BAX HNRNPA2B1 HOPX SEPT7 RPS24 SF3B1 RPL37 FYN EIF1 PRF1 NCL GOLGA4 CD99 IL10RA RPL28 FYB1 HMGB1 RPL9 AKAP9 TYROBP PTPN4 GZMA ANP32A NFKBIA ARAP2 ATP5F1E IQGAP1 APOBEC3G GLIPR1 MTSS1 RAB29 CX3CR1 NUCB2 HLA-E HSP90AB1 RPL14 NDUFA1 NPM1 HLA-A SERF2 SLAMF6 BIRC6 SRSF7 MYBL1 RPL3 RPL37A LCP1\n{cell_types}: 'Naive CD4+ T', 'Effector CD4+ T', 'Naive CD8+ T', 'NK', 'Effector CD8+ T', 'B', 'Monocytes'.", "role": "user" }, { "content": "NK", "role": "assistant" } ]

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