Datasets:
LiteFold
/
GO

Dataset card Data Studio Files
xet
 Community
go_id
string
go_numeric_id
int64
name
string
namespace
string
definition
string
definition_xrefs
list
comment
string
synonyms
list
synonym_scopes
list
alt_ids
list
subsets
list
xrefs
list
is_a_ids
list
relationship_edges
list
relationship_types
list
relationship_target_ids
list
parent_ids
list
intersection_of
list
union_of
list
disjoint_from
list
replaced_by
list
consider
list
property_values
list
created_by
string
creation_date
string
is_obsolete
bool
in_go_basic
bool
split_bucket
int64
GO:0003351
3,351
epithelial cilium movement involved in extracellular fluid movement
biological_process
The directed, self-propelled movement of cilia of epithelial cells. Depending on the type of cell, there may be one or many cilia per cell. This movement is usually coordinated between many epithelial cells, and serves to move extracellular fluid.
[ "GOC:dph", "GOC:krc" ]
null
[ "cilium movement involved in fluid flow", "epithelial cilium beating" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[ "GO:0003341", "GO:0006858", "GO:0099111" ]
[]
[]
[]
[ "GO:0003341", "GO:0006858", "GO:0099111" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17181\" xsd:anyURI" ]
dph
2009-12-03T10:08:25Z
false
true
8
GO:0003352
3,352
regulation of cilium movement
biological_process
Any process that modulates the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium.
[ "GOC:dph" ]
Note that we deem cilium and microtubule-based flagellum to be equivalent.
[ "regulation of flagellar movement", "regulation of flagellum movement", "regulation of microtubule-based flagellum movement" ]
[ "RELATED", "RELATED", "EXACT" ]
[ "GO:1900172" ]
[]
[]
[ "GO:0060632" ]
[ "regulates GO:0003341" ]
[ "regulates" ]
[ "GO:0003341" ]
[ "GO:0003341", "GO:0060632" ]
[ "GO:0065007", "regulates GO:0003341" ]
[]
[]
[]
[]
[]
dph
2009-12-03T10:12:00Z
false
true
5
GO:0003353
3,353
positive regulation of cilium movement
biological_process
Any process that increases the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium.
[ "GOC:dph" ]
Note that we deem cilium and microtubule-based flagellum to be equivalent.
[ "positive regulation of flagellar movement", "positive regulation of flagellum movement", "positive regulation of microtubule-based flagellum movement" ]
[ "RELATED", "RELATED", "EXACT" ]
[ "GO:1900174" ]
[]
[]
[ "GO:0003352", "GO:0048522" ]
[ "positively_regulates GO:0003341" ]
[ "positively_regulates" ]
[ "GO:0003341" ]
[ "GO:0003341", "GO:0003352", "GO:0048522" ]
[ "GO:0065007", "positively_regulates GO:0003341" ]
[]
[]
[]
[]
[]
dph
2009-12-03T10:16:10Z
false
true
6
GO:0003354
3,354
negative regulation of cilium movement
biological_process
Any process that decreases the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium.
[ "GOC:dph" ]
Note that we deem cilium and microtubule-based flagellum to be equivalent.
[ "negative regulation of flagellum movement", "negative regulation of microtubule-based flagellum movement" ]
[ "RELATED", "EXACT" ]
[ "GO:1900173" ]
[]
[]
[ "GO:0003352", "GO:0048523" ]
[ "negatively_regulates GO:0003341" ]
[ "negatively_regulates" ]
[ "GO:0003341" ]
[ "GO:0003341", "GO:0003352", "GO:0048523" ]
[ "GO:0065007", "negatively_regulates GO:0003341" ]
[]
[]
[]
[]
[]
dph
2009-12-03T10:17:47Z
false
true
9
GO:0003355
3,355
cilium movement involved in otolith formation
biological_process
The directed, self-propelled movement of cilia of inner ear epithelial cells, resulting the aggregation of otolith seed particles.
[ "GOC:dph", "GOC:krc", "PMID:19043402" ]
null
[]
[]
[]
[]
[]
[ "GO:0003351" ]
[ "part_of GO:0032475" ]
[ "part_of" ]
[ "GO:0032475" ]
[ "GO:0003351", "GO:0032475" ]
[ "GO:0003341", "part_of GO:0032475" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17181\" xsd:anyURI" ]
dph
2009-12-03T10:21:08Z
false
true
3
GO:0003356
3,356
regulation of cilium beat frequency
biological_process
Any process that modulates the frequency of cilium movement, the directed, self-propelled movement of a cilium.
[ "GOC:dph" ]
Note that we deem cilium and microtubule-based flagellum to be equivalent.
[ "regulation of flagellum beat frequency", "regulation of microtubule-based flagellum beat frequency" ]
[ "RELATED", "EXACT" ]
[ "GO:0036144" ]
[]
[]
[ "GO:0003352" ]
[]
[]
[]
[ "GO:0003352" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-03T10:27:12Z
false
true
4
GO:0003357
3,357
noradrenergic neuron differentiation
biological_process
The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron, a neuron that secretes noradrenaline.
[ "GOC:dph" ]
null
[ "norepinephrine secreting neuron differentiation" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0030182" ]
[]
[]
[]
[ "GO:0030182" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-03T10:34:30Z
false
true
1
GO:0003358
3,358
noradrenergic neuron development
biological_process
The process whose specific outcome is the progression of a noradrenergic neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.
[ "GOC:dph" ]
null
[ "norepinephrine secreting neuron development" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0048666" ]
[ "part_of GO:0003357" ]
[ "part_of" ]
[ "GO:0003357" ]
[ "GO:0003357", "GO:0048666" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-03T10:38:37Z
false
true
3
GO:0003359
3,359
noradrenergic neuron fate commitment
biological_process
The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron.
[ "GOC:dph" ]
null
[ "norepinephrine secreting neuron fate commitment" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0048663" ]
[ "part_of GO:0003357" ]
[ "part_of" ]
[ "GO:0003357" ]
[ "GO:0003357", "GO:0048663" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-03T10:41:08Z
false
true
7
GO:0003361
3,361
obsolete noradrenergic neuron differentiation involved in brainstem development
biological_process
OBSOLETE. The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron that is part of the brainstem.
[ "GOC:dph" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31306\" xsd:anyURI" ]
dph
2009-12-03T10:53:30Z
true
true
8
GO:0003362
3,362
obsolete noradrenergic neuron fate commitment involved in brainstem development
biological_process
OBSOLETE. The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron that is part of the brainstem.
[ "GOC:dph" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003359", "GO:0003360" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-03T10:56:16Z
true
true
7
GO:0003363
3,363
lamellipodium assembly involved in ameboidal cell migration
biological_process
Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell that contributes to the directed self propelled movement of a cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0030032" ]
[ "part_of GO:0001667" ]
[ "part_of" ]
[ "GO:0001667" ]
[ "GO:0001667", "GO:0030032" ]
[ "GO:0030032", "part_of GO:0001667" ]
[]
[]
[]
[]
[]
dph
2009-12-08T04:38:04Z
false
true
9
GO:0003364
3,364
obsolete lamellipodium assembly involved in mesendodermal cell migration
biological_process
OBSOLETE. Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell that contributes to the directed self-propelled movement of a mesendodermal cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0030032", "GO:0090134" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-08T04:46:39Z
true
true
6
GO:0003365
3,365
establishment of cell polarity involved in ameboidal cell migration
biological_process
The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0030010" ]
[ "part_of GO:0001667" ]
[ "part_of" ]
[ "GO:0001667" ]
[ "GO:0001667", "GO:0030010" ]
[ "GO:0030010", "part_of GO:0001667" ]
[]
[]
[]
[]
[]
dph
2009-12-08T04:50:41Z
false
true
6
GO:0003366
3,366
cell-matrix adhesion involved in ameboidal cell migration
biological_process
The binding of a cell to the extracellular matrix that contributes to the directed movement of an ameboid cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0007160" ]
[ "part_of GO:0001667" ]
[ "part_of" ]
[ "GO:0001667" ]
[ "GO:0001667", "GO:0007160" ]
[ "GO:0007160", "part_of GO:0001667" ]
[]
[]
[]
[]
[]
dph
2009-12-08T04:54:33Z
false
true
3
GO:0003367
3,367
cell-cell adhesion involved in ameboidal cell migration
biological_process
The attachment of one ameboid cell to another that contributes to the establishment of cell polarity that is part of the directed movement of one of the cells.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0098609" ]
[ "part_of GO:0003365" ]
[ "part_of" ]
[ "GO:0003365" ]
[ "GO:0003365", "GO:0098609" ]
[ "GO:0098609", "part_of GO:0003365" ]
[]
[]
[]
[]
[]
dph
2009-12-08T05:15:49Z
false
true
3
GO:0003368
3,368
obsolete cell-matrix adhesion involved in mesendodermal cell migration
biological_process
OBSOLETE. The binding of a cell to the extracellular matrix that contributes to the directed movement of a mesendodermal cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0007160", "GO:0090134" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-08T05:26:12Z
true
true
7
GO:0003369
3,369
establishment of cell polarity involved in mesendodermal cell migration
biological_process
The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of a mesendodermal cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0003379" ]
[ "part_of GO:0090134" ]
[ "part_of" ]
[ "GO:0090134" ]
[ "GO:0003379", "GO:0090134" ]
[ "GO:0030010", "part_of GO:0090134" ]
[]
[]
[]
[]
[]
dph
2009-12-08T05:31:51Z
false
true
7
GO:0003370
3,370
cell-cell adhesion involved in mesendodermal cell migration
biological_process
The attachment of mesendodermal cells to each other that contributes to the establishment of cell polarity that is part of the directed movement of the cells of the mesendoderm.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0003367", "GO:0070586" ]
[ "part_of GO:0003369" ]
[ "part_of" ]
[ "GO:0003369" ]
[ "GO:0003367", "GO:0003369", "GO:0070586" ]
[ "GO:0098609", "part_of GO:0003369" ]
[]
[]
[]
[]
[]
dph
2009-12-08T05:33:51Z
false
true
4
GO:0003371
3,371
establishment or maintenance of cytoskeleton polarity involved in ameboidal cell migration
biological_process
Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0030952" ]
[ "part_of GO:0003365" ]
[ "part_of" ]
[ "GO:0003365" ]
[ "GO:0003365", "GO:0030952" ]
[ "GO:0030952", "part_of GO:0001667" ]
[]
[]
[]
[]
[]
dph
2009-12-08T05:42:46Z
false
true
7
GO:0003372
3,372
obsolete establishment or maintenance of cytoskeleton polarity involved in mesendodermal cell migration
biological_process
OBSOLETE. Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating mesendodermal cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0030952", "GO:0090134" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-08T05:46:23Z
true
true
9
GO:0003373
3,373
obsolete dynamin family protein polymerization involved in membrane fission
biological_process
OBSOLETE. The process of creating dynamin family protein polymers, compounds composed of a large number of dynamin family protein monomers. Dynamin family protein polymers form around lipid tubes and contribute to membrane fission.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25181\" xsd:anyURI" ]
dph
2009-12-09T04:55:16Z
true
true
4
GO:0003374
3,374
obsolete dynamin family protein polymerization involved in mitochondrial fission
biological_process
OBSOLETE. The process of creating dynamin protein family polymers, compounds composed of a large number of dynamin family monomers around a lipid tube of a dividing mitochondrion. Dynamin polymers form around lipid tubes and contribute to membrane fission.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24439\" xsd:anyURI" ]
dph
2009-12-09T05:39:52Z
true
true
6
GO:0003375
3,375
obsolete regulation of dynamin family protein polymerization involved in membrane fission
biological_process
OBSOLETE. Any process that modulates the rate, frequency, or extent of dynamin family protein polymerization involved in mitochondrial fission.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25181\" xsd:anyURI" ]
dph
2009-12-09T05:50:15Z
true
true
5
GO:0003376
3,376
sphingosine-1-phosphate receptor signaling pathway
biological_process
A G protein-coupled receptor signaling pathway initiated by sphingosine-1-phosphate binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.
[ "GOC:ascb_2009", "GOC:signaling", "PMID:14592418", "PMID:22001186" ]
null
[ "S1P receptor signaling pathway", "S1P signaling pathway", "S1P-activated G-protein coupled receptor signaling pathway", "S1P-activated GPCR signaling pathway", "S1P-stimulated signal transduction pathway", "sphingolipid signaling pathway", "sphingolipid signalling pathway" ]
[ "EXACT", "RELATED", "EXACT", "EXACT", "EXACT", "BROAD", "BROAD" ]
[ "GO:0001789" ]
[]
[]
[ "GO:0007186", "GO:0090520" ]
[]
[]
[]
[ "GO:0007186", "GO:0090520" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15822\" xsd:anyURI" ]
dph
2009-12-09T06:30:12Z
false
true
9
GO:0003377
3,377
obsolete regulation of apoptosis by sphingosine-1-phosphate signaling pathway
biological_process
OBSOLETE. A sphingosine-1-phosphate signaling pathway that modulates the rate, frequency, or extent of apoptosis.
[ "GOC:ascb_2009", "GOC:dph", "GOC:signaling", "GOC:tb" ]
The reason for obsoletion is that this term represents a GO-CAM model.
[ "regulation of apoptosis by sphingolipid signaling pathway", "regulation of apoptosis by sphingolipid signalling pathway" ]
[ "BROAD", "BROAD" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
dph
2009-12-09T06:32:22Z
true
true
7
GO:0003378
3,378
obsolete regulation of inflammatory response by sphingosine-1-phosphate signaling pathway
biological_process
OBSOLETE. A sphingosine-1-phosphate signaling pathway that modulates the rate, frequency, or extent of the inflammatory response.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
The reason for obsoletion is that this term represents a GO-CAM model.
[ "regulation of inflammatory response by sphingolipid signaling pathway", "regulation of inflammatory response by sphingolipid signalling pathway" ]
[ "BROAD", "BROAD" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
dph
2009-12-09T06:38:06Z
true
true
2
GO:0003380
3,380
establishment or maintenance of cytoskeleton polarity involved in gastrulation
biological_process
Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell taking part in gastrulation.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0003371" ]
[ "part_of GO:0003379" ]
[ "part_of" ]
[ "GO:0003379" ]
[ "GO:0003371", "GO:0003379" ]
[ "GO:0030952", "part_of GO:0007369" ]
[]
[]
[]
[]
[]
dph
2009-12-09T07:10:57Z
false
true
4
GO:0003381
3,381
epithelial cell morphogenesis involved in gastrulation
biological_process
The change in form that occurs when an epithelial cell progresses from it initial formation to its mature state, contributing to the process of gastrulation.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0003382" ]
[ "part_of GO:0007369" ]
[ "part_of" ]
[ "GO:0007369" ]
[ "GO:0003382", "GO:0007369" ]
[ "GO:0003382", "part_of GO:0007369" ]
[]
[]
[]
[]
[]
dph
2009-12-09T07:18:53Z
false
true
3
GO:0003382
3,382
epithelial cell morphogenesis
biological_process
The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0000902" ]
[ "part_of GO:0002064" ]
[ "part_of" ]
[ "GO:0002064" ]
[ "GO:0000902", "GO:0002064" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-09T07:21:06Z
false
true
4
GO:0003383
3,383
apical constriction
biological_process
The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0070252" ]
[ "part_of GO:0003382" ]
[ "part_of" ]
[ "GO:0003382" ]
[ "GO:0003382", "GO:0070252" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-09T07:30:34Z
false
true
8
GO:0003384
3,384
apical constriction involved in gastrulation
biological_process
The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell, contributing to the process of gastrulation.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0003383" ]
[ "part_of GO:0003381" ]
[ "part_of" ]
[ "GO:0003381" ]
[ "GO:0003381", "GO:0003383" ]
[ "GO:0003383", "part_of GO:0007369" ]
[]
[]
[]
[]
[]
dph
2009-12-09T07:35:38Z
false
true
7
GO:0003385
3,385
obsolete cell-cell signaling involved in amphid sensory organ development
biological_process
OBSOLETE. Any process that mediates the transfer of information from one cell to another and contributes to the progression of an amphid sensory organ over time, from its formation to the mature state.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[ "cell-cell signalling involved in amphid sensory organ development" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25766\" xsd:anyURI" ]
dph
2009-12-09T08:55:37Z
true
true
6
GO:0003386
3,386
amphid sensory organ development
biological_process
The progression of the amphid sensory organ over time, from its formation to the mature structure. Amphid sensory organs are the sensory organs of nematodes.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0007423" ]
[]
[]
[]
[ "GO:0007423" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-09T09:09:20Z
false
true
3
GO:0003387
3,387
neuron differentiation involved in amphid sensory organ development
biological_process
The process in which a relatively unspecialized cell acquires specialized features of a neuron that contributes to the progression of the amphid sensory gland.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0030182" ]
[ "part_of GO:0003386" ]
[ "part_of" ]
[ "GO:0003386" ]
[ "GO:0003386", "GO:0030182" ]
[ "GO:0030182", "part_of GO:0003386" ]
[]
[]
[]
[]
[]
dph
2009-12-09T09:15:00Z
false
true
4
GO:0003388
3,388
neuron development involved in amphid sensory organ development
biological_process
The process whose specific outcome is the progression of a neuron over time, that contributes to the development of the amphid sensory organ.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0048666" ]
[ "part_of GO:0003387" ]
[ "part_of" ]
[ "GO:0003387" ]
[ "GO:0003387", "GO:0048666" ]
[ "GO:0048666", "part_of GO:0003386" ]
[]
[]
[]
[]
[]
dph
2009-12-09T09:18:06Z
false
true
7
GO:0003389
3,389
retrograde extension
biological_process
The progression of a neuronal projection over time by the attachment of a part of the cell to an anchor and the subsequent migration of the cell body away from the anchor point.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0031175" ]
[]
[]
[]
[ "GO:0031175" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-09T09:22:03Z
false
true
7
GO:0003390
3,390
dendrite development by retrograde extension
biological_process
The progression of a dendrite over time by the attachment of a part of the neuron to an anchor and the subsequent migration of the cell body away from the anchor point.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[ "dendrite retrograde extension" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0003389", "GO:0016358" ]
[]
[]
[]
[ "GO:0003389", "GO:0016358" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-09T09:25:24Z
false
true
1
GO:0003391
3,391
amphid sensory organ dendrite retrograde extension
biological_process
The progression of an amphid sensory organ's neuronal dendrite over time by the attachment of a part of the cell to an anchor and the subsequent migration of the cell body away from the anchor point.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0003390" ]
[ "part_of GO:0003388" ]
[ "part_of" ]
[ "GO:0003388" ]
[ "GO:0003388", "GO:0003390" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-09T09:28:27Z
false
true
7
GO:0003392
3,392
obsolete cell adhesion involved in retrograde extension
biological_process
OBSOLETE. The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31330\" xsd:anyURI" ]
dph
2009-12-09T09:32:06Z
true
true
7
GO:0003393
3,393
obsolete neuron migration involved in retrograde extension
biological_process
OBSOLETE. The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31330\" xsd:anyURI" ]
dph
2009-12-09T09:36:03Z
true
true
1
GO:0003394
3,394
obsolete cell adhesion involved in dendrite retrograde extension
biological_process
OBSOLETE. The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension of a dendrite.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31330\" xsd:anyURI" ]
dph
2009-12-09T09:42:09Z
true
true
4
GO:0003395
3,395
obsolete neuron migration involved in dendrite retrograde extension
biological_process
OBSOLETE. The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31330\" xsd:anyURI" ]
dph
2009-12-09T09:44:24Z
true
true
6
GO:0003396
3,396
obsolete cell adhesion involved in amphid sensory organ dendrite retrograde extension
biological_process
OBSOLETE. The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite in a neuron of the amphid sensory organ.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003391", "GO:0007155" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-09T09:50:18Z
true
true
3
GO:0003397
3,397
obsolete neuron migration involved in amphid sensory organ dendrite retrograde extension
biological_process
OBSOLETE. The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite of a neuron in the amphid sensory organ.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0001764", "GO:0003391" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-09T09:52:18Z
true
true
1
GO:0003398
3,398
glial cell differentiation involved in amphid sensory organ development
biological_process
The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the amphid sensory organ.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0010001" ]
[ "part_of GO:0003386" ]
[ "part_of" ]
[ "GO:0003386" ]
[ "GO:0003386", "GO:0010001" ]
[ "GO:0010001", "part_of GO:0003386" ]
[]
[]
[]
[]
[]
dph
2009-12-09T09:55:27Z
false
true
9
GO:0003399
3,399
cytoneme morphogenesis
biological_process
The process in which the anatomical structures of a cytoneme are shaped. A cytoneme is a long, thin and polarized actin-based cytoplasmic extension that projects from a cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0120039" ]
[]
[]
[]
[ "GO:0120039" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-09T10:03:32Z
false
true
8
GO:0003400
3,400
regulation of COPII vesicle coating
biological_process
Any process that modulates the rate, frequency, or extent of the addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.
[ "GOC:ascb_2009", "GOC:dph", "GOC:jp", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0033043", "GO:0043254" ]
[ "regulates GO:0048208" ]
[ "regulates" ]
[ "GO:0048208" ]
[ "GO:0033043", "GO:0043254", "GO:0048208" ]
[ "GO:0065007", "regulates GO:0048208" ]
[]
[]
[]
[]
[]
dph
2009-12-17T08:38:14Z
false
true
3
GO:0003401
3,401
axis elongation
biological_process
The developmental growth that results in the elongation of a line that defines polarity or symmetry in an anatomical structure.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[ "elongation of an axis" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0060560" ]
[]
[]
[]
[ "GO:0060560" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-21T01:12:15Z
false
true
8
GO:0003402
3,402
obsolete planar cell polarity pathway involved in axis elongation
biological_process
OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal to modulate cytoskeletal elements and control cell polarity that contributes to axis elongation.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
The reason for obsoletion is that this term should be captured using GO-CAM or extensions.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28548\" xsd:anyURI" ]
dph
2009-12-21T01:22:11Z
true
true
5
GO:0003403
3,403
optic vesicle formation
biological_process
The developmental process pertaining to the initial formation of the optic vesicle from the lateral wall of the forebrain. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that ...
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0048646" ]
[ "part_of GO:0003404", "part_of GO:0060900" ]
[ "part_of", "part_of" ]
[ "GO:0003404", "GO:0060900" ]
[ "GO:0003404", "GO:0048646", "GO:0060900" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-21T01:42:37Z
false
true
9
GO:0003404
3,404
optic vesicle morphogenesis
biological_process
The developmental process pertaining to the formation and shaping of the optic vesicle. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup...
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0048598", "GO:0048729" ]
[ "part_of GO:0048596" ]
[ "part_of" ]
[ "GO:0048596" ]
[ "GO:0048596", "GO:0048598", "GO:0048729" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-21T01:54:34Z
false
true
9
GO:0003405
3,405
optic vesicle elongation
biological_process
The developmental growth that results in the lengthening of the optic vesicle in the posterior direction.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0060560" ]
[ "part_of GO:0003404" ]
[ "part_of" ]
[ "GO:0003404" ]
[ "GO:0003404", "GO:0060560" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-21T01:59:50Z
false
true
1
GO:0003406
3,406
retinal pigment epithelium development
biological_process
The progression of the retinal pigment epithelium over time, from its initial formation to the mature structure. The retinal pigment epithelium is the melanin-containing layer of cells between the retina and the choroid that absorbs scattered and reflected light and removes waste products produced by the photoreceptor ...
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[ "RPE development" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0060429" ]
[ "part_of GO:0060041" ]
[ "part_of" ]
[ "GO:0060041" ]
[ "GO:0060041", "GO:0060429" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-21T02:04:27Z
false
true
4
GO:0003408
3,408
optic cup formation involved in camera-type eye development
biological_process
The developmental process pertaining to the initial formation of the optic cup, a two-walled vesicle formed from the optic vesicle.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0048646" ]
[ "part_of GO:0002072" ]
[ "part_of" ]
[ "GO:0002072" ]
[ "GO:0002072", "GO:0048646" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-21T02:37:12Z
false
true
6
GO:0003409
3,409
optic cup structural organization
biological_process
The process that contributes to creating the structural organization of the optic cup. This process pertains to the physical shaping of the rudimentary structure.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[ "optic cup structural organisation" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0048532" ]
[ "part_of GO:0002072" ]
[ "part_of" ]
[ "GO:0002072" ]
[ "GO:0002072", "GO:0048532" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-21T02:44:20Z
false
true
7
GO:0003410
3,410
anterior rotation of the optic cup
biological_process
A 90 degree-rotation of the optic cup resulting in its alignment with the anterior-posterior body axis.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0048856" ]
[ "part_of GO:0043010" ]
[ "part_of" ]
[ "GO:0043010" ]
[ "GO:0043010", "GO:0048856" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-21T02:49:48Z
false
true
2
GO:0003411
3,411
obsolete cell motility involved in camera-type eye morphogenesis
biological_process
OBSOLETE. Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another and contributes to the physical shaping or formation of the camera-type eye.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0048593", "GO:0048870" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-21T03:04:27Z
true
true
8
GO:0003412
3,412
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis
biological_process
The specification and formation of the apicobasal polarity of an epithelial cell that contributes to the shaping of a camera-type eye.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0045198" ]
[ "part_of GO:0048593" ]
[ "part_of" ]
[ "GO:0048593" ]
[ "GO:0045198", "GO:0048593" ]
[ "GO:0045198", "part_of GO:0048593" ]
[]
[]
[]
[]
[]
dph
2009-12-21T03:09:23Z
false
true
4
GO:0003413
3,413
chondrocyte differentiation involved in endochondral bone morphogenesis
biological_process
The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0002062" ]
[ "part_of GO:0060351" ]
[ "part_of" ]
[ "GO:0060351" ]
[ "GO:0002062", "GO:0060351" ]
[ "GO:0002062", "part_of GO:0060350" ]
[]
[]
[]
[]
[]
dph
2009-12-22T08:39:58Z
false
true
8
GO:0003415
3,415
chondrocyte hypertrophy
biological_process
The growth of a chondrocyte, where growth contributes to the progression of the chondrocyte over time.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0048588" ]
[ "part_of GO:0002063" ]
[ "part_of" ]
[ "GO:0002063" ]
[ "GO:0002063", "GO:0048588" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T08:48:44Z
false
true
2
GO:0003416
3,416
endochondral bone growth
biological_process
The increase in size or mass of an endochondral bone that contributes to the shaping of the bone.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0098868" ]
[]
[]
[]
[ "GO:0098868" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T08:52:55Z
false
true
4
GO:0003417
3,417
growth plate cartilage development
biological_process
The process whose specific outcome is the progression of the cartilage that will provide a scaffold for mineralization of endochondral bones as they elongate or grow.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0060351", "GO:0061448" ]
[ "part_of GO:0003416" ]
[ "part_of" ]
[ "GO:0003416" ]
[ "GO:0003416", "GO:0060351", "GO:0061448" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T08:57:42Z
false
true
7
GO:0003418
3,418
growth plate cartilage chondrocyte differentiation
biological_process
The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the growth of a bone. A chondrocyte is a polymorphic cell that forms cartilage.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0003413" ]
[ "part_of GO:0003417" ]
[ "part_of" ]
[ "GO:0003417" ]
[ "GO:0003413", "GO:0003417" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T09:00:56Z
false
true
6
GO:0003419
3,419
growth plate cartilage chondrocyte proliferation
biological_process
The multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0008283" ]
[ "part_of GO:0003417" ]
[ "part_of" ]
[ "GO:0003417" ]
[ "GO:0003417", "GO:0008283" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T09:02:51Z
false
true
2
GO:0003420
3,420
regulation of growth plate cartilage chondrocyte proliferation
biological_process
Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0042127" ]
[ "regulates GO:0003419" ]
[ "regulates" ]
[ "GO:0003419" ]
[ "GO:0003419", "GO:0042127" ]
[ "GO:0065007", "regulates GO:0003419" ]
[]
[]
[]
[]
[]
dph
2009-12-22T09:07:40Z
false
true
8
GO:0003421
3,421
growth plate cartilage axis specification
biological_process
The establishment, maintenance and elaboration of the columnar cartilage along the axis of a long bone that contributes to bone growth.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[ "growth plate cartilage axis determination" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0009798" ]
[ "part_of GO:0003422" ]
[ "part_of" ]
[ "GO:0003422" ]
[ "GO:0003422", "GO:0009798" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T09:16:33Z
false
true
2
GO:0003422
3,422
growth plate cartilage morphogenesis
biological_process
The process in which the anatomical structures of growth plate cartilage are generated and organized.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0060536" ]
[ "part_of GO:0003417" ]
[ "part_of" ]
[ "GO:0003417" ]
[ "GO:0003417", "GO:0060536" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T09:21:30Z
false
true
9
GO:0003423
3,423
growth plate cartilage chondrocyte division
biological_process
The process resulting in the oriented physical partitioning and separation of a chondrocytes in the growth plate.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0051301" ]
[ "part_of GO:0003419" ]
[ "part_of" ]
[ "GO:0003419" ]
[ "GO:0003419", "GO:0051301" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T09:55:51Z
false
true
1
GO:0003424
3,424
obsolete establishment of cell polarity involved in growth plate cartilage chondrocyte division
biological_process
OBSOLETE. The cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization that results in the directional division of a growth plate cartilage chondrocyte.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[ "growth plate cartilage chondrocyte polarization" ]
[ "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31306\" xsd:anyURI" ]
dph
2009-12-22T10:18:10Z
true
true
4
GO:0003425
3,425
obsolete establishment of mitotic spindle orientation involved in growth plate cartilage chondrocyte division
biological_process
OBSOLETE. A cell cycle process that sets the alignment of mitotic spindle relative to other cellular structures and contributes to oriented chondrocyte division in the growth plate.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003423", "GO:0051294" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-22T10:36:36Z
true
true
4
GO:0003426
3,426
obsolete obsolete cytoskeleton polarization involved in growth plate cartilage chondrocyte division
biological_process
OBSOLETE. OBSOLETE. A process that is carried out at the cellular level which results in the polarization of cytoskeletal structures in a growth plate cartilage chondrocyte. This process results in the oriented division of the cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31306\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31330\" xsd:anyURI" ]
dph
2009-12-22T11:38:22Z
true
true
4
GO:0003427
3,427
obsolete regulation of cytoskeleton polarization involved in growth plate cartilage chondrocyte division
biological_process
OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell that modulates the rate, frequency, or extent of the polarization of cytoskeletal structures in a growth plate cartilage chondrocyte. This process results in the oriented division of the cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[ "regulation of cytoskeleton polarization involved in growth plate cartilage chondrocyte division by planar cell polarity pathway" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-22T11:43:29Z
true
true
9
GO:0003429
3,429
growth plate cartilage chondrocyte morphogenesis
biological_process
The process in which the structures of a chondrocyte in the growth plate cartilage are generated and organized.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0003422", "GO:0090171" ]
[ "part_of GO:0003418" ]
[ "part_of" ]
[ "GO:0003418" ]
[ "GO:0003418", "GO:0003422", "GO:0090171" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T12:22:24Z
false
true
5
GO:0003430
3,430
growth plate cartilage chondrocyte growth
biological_process
The growth of a growth plate cartilage chondrocyte, where growth contributes to the progression of the chondrocyte over time from one condition to another.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[ "growth plate cartilage chondrocyte hypertrophy" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0003415", "GO:0060560" ]
[ "part_of GO:0003431" ]
[ "part_of" ]
[ "GO:0003431" ]
[ "GO:0003415", "GO:0003431", "GO:0060560" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T12:29:19Z
false
true
9
GO:0003431
3,431
growth plate cartilage chondrocyte development
biological_process
The progression of a growth plate cartilage chondrocyte over time from after its fate commitment to the mature cell.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0003433" ]
[ "part_of GO:0003418" ]
[ "part_of" ]
[ "GO:0003418" ]
[ "GO:0003418", "GO:0003433" ]
[]
[]
[]
[]
[]
[]
dph
2009-12-22T12:32:49Z
false
true
6
GO:0003433
3,433
chondrocyte development involved in endochondral bone morphogenesis
biological_process
The progression of a chondrocyte over time from after its commitment to its mature state where the chondrocyte will contribute to the shaping of an endochondral bone.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0002063" ]
[ "part_of GO:0003413" ]
[ "part_of" ]
[ "GO:0003413" ]
[ "GO:0002063", "GO:0003413" ]
[ "GO:0002063", "part_of GO:0060350" ]
[]
[]
[]
[]
[]
dph
2009-12-22T12:42:44Z
false
true
3
GO:0003434
3,434
obsolete BMP signaling pathway involved in growth plate cartilage chondrocyte development
biological_process
OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the progression of a growth plate cartilage chondrocyte over time.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it represents a GO-CAM model.
[ "BMP signalling pathway involved in growth plate cartilage chondrocyte development" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003431", "GO:0030509" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25535\" xsd:anyURI" ]
dph
2009-12-22T12:50:17Z
true
true
6
GO:0003435
3,435
obsolete smoothened signaling pathway involved in growth plate cartilage chondrocyte development
biological_process
OBSOLETE. The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened that contributes to the progression of a growth plate cartilage chondrocyte over time.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it represents a GO-CAM model.
[ "hedgehog signaling pathway involved in growth plate cartilage chondrocyte development", "hh signaling pathway involved in growth plate cartilage chondrocyte development", "smoothened signalling pathway involved in growth plate cartilage chondrocyte development" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25766\" xsd:anyURI" ]
dph
2009-12-22T01:02:42Z
true
true
7
GO:0003436
3,436
obsolete regulation of cell adhesion involved in growth plate cartilage morphogenesis
biological_process
OBSOLETE. Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix and contributes to the shaping of the growth plate cartilage of an endochondral bone.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003422", "GO:0030155" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-22T01:28:15Z
true
true
4
GO:0003437
3,437
obsolete regulation of cell communication involved in growth plate cartilage morphogenesis
biological_process
OBSOLETE. Any process that modulates the frequency, rate or extent of cell communication that contributes to the shaping of the growth plate cartilage.
[ "GOC:ascb_2009", "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003422", "GO:0010646" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
dph
2009-12-22T01:34:24Z
true
true
8
GO:0003673
3,673
obsolete Gene_Ontology
biological_process
OBSOLETE. A controlled vocabulary that can be applied to all organisms even as knowledge of gene and protein roles in cells is accumulating and changing. GO provides three structured networks of defined terms to describe gene product attributes.
[ "GOC:curators" ]
This term was made obsolete because more specific terms were created.
[ "Gene_Ontology" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
null
null
true
true
5
GO:0003674
3,674
molecular_function
molecular_function
A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
[ "GOC:pdt" ]
Note that, in addition to forming the root of the molecular function ontology, this term is recommended for the annotation of gene products whose molecular function is unknown. When this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotate...
[ "molecular function" ]
[ "EXACT" ]
[ "GO:0005554" ]
[ "goslim_candida", "goslim_chembl", "goslim_metagenomics", "goslim_pir", "goslim_plant", "goslim_yeast" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0003675
3,675
obsolete protein
cellular_component
OBSOLETE. (Was not defined before being made obsolete).
[ "GOC:ai" ]
Note that this term was deleted from GO and was restored to the ontology in Feb 2003 to ensure that the ID is not reused.
[ "protein" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
null
null
true
true
1
GO:0003676
3,676
nucleic acid binding
molecular_function
Binding to a nucleic acid.
[ "GOC:jl" ]
null
[ "base pairing" ]
[ "NARROW" ]
[ "GO:0000496" ]
[ "goslim_chembl", "goslim_metagenomics", "goslim_pir", "goslim_plant" ]
[]
[ "GO:0005488" ]
[]
[]
[]
[ "GO:0005488" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0003677
3,677
DNA binding
molecular_function
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
[ "GOC:dph", "GOC:jl", "GOC:tb", "GOC:vw" ]
null
[ "microtubule/chromatin interaction", "plasmid binding", "structure specific DNA binding", "structure-specific DNA binding" ]
[ "RELATED", "NARROW", "RELATED", "RELATED" ]
[ "GO:0043566" ]
[ "goslim_agr", "goslim_candida", "goslim_chembl", "goslim_drosophila", "goslim_euk_cellular_processes_ribbon", "goslim_flybase_ribbon", "goslim_generic", "goslim_mouse", "goslim_plant", "goslim_plant_ribbon", "goslim_prokaryote", "goslim_prokaryote_ribbon", "goslim_yeast" ]
[]
[ "GO:0003676" ]
[]
[]
[]
[ "GO:0003676" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0003678
3,678
DNA helicase activity
molecular_function
Unwinding of a DNA helix, driven by ATP hydrolysis.
[ "GOC:jl" ]
null
[ "ATP-dependent DNA helicase activity" ]
[ "EXACT" ]
[ "GO:0003679", "GO:0004003" ]
[]
[ "EC:3.6.4.12", "Reactome:R-HSA-5693589 \"D-loop dissociation and strand annealing\"" ]
[ "GO:0004386", "GO:0008094" ]
[]
[]
[]
[ "GO:0004386", "GO:0008094" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:3.6.4.12", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23533\" xsd:anyURI" ]
null
null
false
true
9
GO:0003681
3,681
bent DNA binding
molecular_function
Binding to DNA in a bent conformation.
[ "GOC:jl", "PMID:12627977" ]
null
[]
[]
[]
[]
[]
[ "GO:0003677" ]
[]
[]
[]
[ "GO:0003677" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0003682
3,682
chromatin binding
molecular_function
Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
[ "GOC:jl", "ISBN:0198506732", "PMID:20404130" ]
null
[ "lamin/chromatin binding", "microtubule/chromatin interaction", "nuclear membrane vesicle binding to chromatin" ]
[ "NARROW", "NARROW", "NARROW" ]
[]
[ "goslim_chembl", "goslim_drosophila", "goslim_pir", "goslim_plant", "goslim_yeast" ]
[]
[ "GO:0005488" ]
[]
[]
[]
[ "GO:0005488" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0003683
3,683
obsolete lamin/chromatin binding
molecular_function
OBSOLETE. (Was not defined before being made obsolete).
[ "GOC:ai" ]
This term was made obsolete because it represents two functions.
[ "lamin/chromatin binding" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003682", "GO:0005521" ]
[]
null
null
true
true
1
GO:0003684
3,684
damaged DNA binding
molecular_function
Binding to damaged DNA.
[ "GOC:jl" ]
null
[ "DNA repair enzyme", "DNA repair protein" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[ "GO:0003677" ]
[]
[]
[]
[ "GO:0003677" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0003685
3,685
obsolete DNA repair protein
molecular_function
OBSOLETE. (Was not defined before being made obsolete).
[ "GOC:elh" ]
This term was made obsolete because it includes a process term.
[ "DNA repair protein" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003684" ]
[]
null
null
true
true
5
GO:0003687
3,687
obsolete DNA replication factor
molecular_function
OBSOLETE. (Was not defined before being made obsolete).
[ "GOC:jl" ]
This term was made obsolete because it does not represent a true molecular function.
[ "DNA replication factor" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006260" ]
[]
null
null
true
true
3
GO:0003688
3,688
DNA replication origin binding
molecular_function
Binding to a DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally.
[ "GOC:curators" ]
null
[ "ARS binding" ]
[ "NARROW" ]
[]
[]
[]
[ "GO:1990837" ]
[]
[]
[]
[ "GO:1990837" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0003689
3,689
DNA clamp loader activity
molecular_function
Facilitating the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex, driven by ATP hydrolysis.
[ "GOC:mah", "GOC:vw", "PMID:16082778" ]
null
[ "DNA clamp loading ATPase activity", "DNA-protein loading ATPase activity", "PCNA loading activity", "PCNA loading complex activity", "protein-DNA loading ATPase activity" ]
[ "EXACT", "RELATED", "NARROW", "NARROW", "RELATED" ]
[ "GO:0033170" ]
[]
[ "Reactome:R-HSA-174439 \"Loading of PCNA - Sliding Clamp Formation on the C-strand of the telomere\"", "Reactome:R-HSA-176264 \"Recruitment of the Rad9-Hus1-Rad1 complex to DNA\"" ]
[ "GO:0008094" ]
[ "has_part GO:0003677" ]
[ "has_part" ]
[ "GO:0003677" ]
[ "GO:0003677", "GO:0008094" ]
[]
[]
[]
[]
[]
[ "skos:broadMatch RHEA:13065", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28520\" xsd:anyURI" ]
null
null
false
true
2
GO:0003690
3,690
double-stranded DNA binding
molecular_function
Binding to double-stranded DNA.
[ "GOC:elh", "GOC:vw" ]
null
[ "dsDNA binding" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0003677" ]
[]
[]
[]
[ "GO:0003677" ]
[]
[]
[ "GO:0003697" ]
[]
[]
[]
null
null
false
true
7
GO:0003691
3,691
double-stranded telomeric DNA binding
molecular_function
Binding to double-stranded telomere-associated DNA.
[ "GOC:jl", "ISBN:0321000382" ]
null
[]
[]
[]
[]
[]
[ "GO:0003690", "GO:0042162" ]
[]
[]
[]
[ "GO:0003690", "GO:0042162" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0003692
3,692
left-handed Z-DNA binding
molecular_function
Binding to DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags.
[ "ISBN:0716720094" ]
null
[]
[]
[]
[]
[]
[ "GO:0003690" ]
[]
[]
[]
[ "GO:0003690" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0003693
3,693
P-element binding
molecular_function
Binding to a P-element, a class of Drosophila transposon responsible for hybrid dysgenesis.
[ "GOC:jl", "PMID:9440262" ]
null
[]
[]
[]
[]
[]
[ "GO:1990837" ]
[]
[]
[]
[ "GO:1990837" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0003694
3,694
obsolete plasmid binding
molecular_function
OBSOLETE. Interacting selectively with a plasmid, an extrachromosomal genetic element usually characterized as a covalently continuous double stranded DNA molecule found in bacteria and some other microorganisms.
[ "ISBN:0198506732" ]
This term was made obsolete because it refers to component information.
[ "plasmid binding", "plasmid-associated protein" ]
[ "EXACT", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003677", "GO:0005727" ]
[]
null
null
true
true
7