LiteFold/GO · Datasets at Hugging Face

GO:0090678

90,678

cell dedifferentiation involved in phenotypic switching

biological_process

A cell dedifferentiation process that is a part of a reversible switch of a cell from one cell type or form to another, at a frequency above the expected frequency for somatic mutations.

[ "GOC:curators" ]

null

[]

[ "GO:0043697" ]

[ "part_of GO:0090677" ]

[ "part_of" ]

[ "GO:0090677" ]

[ "GO:0043697", "GO:0090677" ]

[]

tb

2016-04-28T17:32:40Z

false

true

1

GO:0090679

90,679

cell differentiation involved in phenotypic switching

biological_process

A cell differentiation process that is a part of a reversible switch of a cell from one cell type or form to another, at a frequency above the expected frequency for somatic mutations.

[ "GOC:curators" ]

null

[]

[ "GO:0030154" ]

[ "part_of GO:0090677" ]

[ "part_of" ]

[ "GO:0090677" ]

[ "GO:0030154", "GO:0090677" ]

[ "GO:0030154", "part_of GO:0090677" ]

[]

tb

2016-04-28T17:32:40Z

false

true

5

GO:0090680

90,680

viral release via disruption of host outer membrane

biological_process

The dissemination of mature viral particles from a host cell via the destabilization of the cell outer membrane.

[ "PMID:17900620" ]

null

[ "disruption by virus of host outer membrane" ]

[ "RELATED" ]

[]

[ "GO:0044659" ]

[ "has_part GO:0051673" ]

[ "has_part" ]

[ "GO:0051673" ]

[ "GO:0044659", "GO:0051673" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24077\" xsd:anyURI" ]

tb

2016-05-04T15:52:02Z

false

true

8

GO:0090682

90,682

GPCR bitter taste receptor activity

molecular_function

A G protein-coupled receptor activity that is responsible for the sense of bitter taste.

[ "GOC:hat", "GOC:tb" ]

null

[ "G protein-coupled receptor bitter taste receptor activity", "G-protein coupled receptor bitter taste receptor activity" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0033038", "GO:0090681" ]

[]

[ "GO:0033038", "GO:0090681" ]

[]

tb

2016-05-20T15:49:18Z

false

true

9

GO:0090683

90,683

GPCR sweet taste receptor activity

molecular_function

A G protein-coupled receptor activity that is responsible for the sense of sweet taste.

[ "GOC:hat", "GOC:tb" ]

null

[ "G-protein coupled receptor sweet taste receptor activity" ]

[ "EXACT" ]

[]

[ "GO:0033041", "GO:0090681" ]

[]

[ "GO:0033041", "GO:0090681" ]

[]

tb

2016-05-20T15:49:18Z

false

true

1

GO:0090684

90,684

contact chemoreceptor activity

molecular_function

A non-GPCR transmembrane signaling receptor activity that is responsible for contact chemoreception.

[ "GOC:hat", "GOC:tb" ]

null

[ "contact chemosensation receptor activity" ]

[ "EXACT" ]

[]

[ "GO:0008527" ]

[]

[ "GO:0008527" ]

[]

tb

2016-05-20T15:53:01Z

false

true

7

GO:0090685

90,685

RNA localization to nucleus

biological_process

A macromolecular localization process in which RNA is transported to and maintained in a location within the nucleus.

[ "GOC:mah", "PMID:26305931" ]

null

[ "RNA localisation to nucleus" ]

[ "EXACT" ]

[]

[ "GO:0006403" ]

[]

[ "GO:0006403" ]

[]

tb

2016-07-19T17:00:49Z

false

true

8

GO:0090686

90,686

glycine betaine-activated nonselective monoatomic cation channel activity

molecular_function

Enables the transmembrane transfer of a monoatomic cation by a channel that opens when glycine betaine has been bound by the channel complex or one of its constituent parts.

[ "GOC:kmv", "PMID:24212673" ]

null

[ "glycine betaine-activated nonselective monovalent cation channel activity" ]

[ "RELATED" ]

[]

[ "GO:0099094" ]

[]

[ "GO:0099094" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/12497\" xsd:anyURI" ]

tb

2016-07-20T16:29:01Z

false

true

6

GO:0090687

90,687

activation of meiosis I spindle assembly checkpoint

biological_process

Any process that starts the inactive process of a meiosis I cell cycle spindle assembly checkpoint.

[ "GOC:mah" ]

null

[]

[ "GO:1905326" ]

[]

[ "GO:1905326" ]

[]

tb

2016-07-20T16:49:17Z

false

true

4

GO:0090688

90,688

cleavage furrow rim

cellular_component

The part of the cleavage furrow closest to the cell surface.

[ "GOC:vw", "PMID:27082518" ]

null

[]

[ "GO:0110165" ]

[ "part_of GO:0032154" ]

[ "part_of" ]

[ "GO:0032154" ]

[ "GO:0032154", "GO:0110165" ]

[]

tb

2016-07-26T16:00:10Z

false

true

6

GO:0090689

90,689

cleavage furrow leading edge

cellular_component

The 'trough' of the cleavage furrow. This is the part of the cleavage furrow closest to the contractile ring.

[ "GOC:vw", "PMID:27082518" ]

null

[]

[ "GO:0110165" ]

[ "part_of GO:0032154" ]

[ "part_of" ]

[ "GO:0032154" ]

[ "GO:0032154", "GO:0110165" ]

[]

tb

2016-07-26T16:00:10Z

false

true

8

GO:0090690

90,690

obsolete heteroreceptor complex

cellular_component

OBSOLETE. A receptor complex that consists of two or more different receptor complexes that individually undergo combination with a hormone, neurotransmitter, drug or intracellular messenger. The formation of the higher level complex initiates a change in cell function.

[ "GOC:pad", "GOC:PARL", "PMID:22035699", "PMID:24157794" ]

This term was obsoleted as it was created in error.

[]

tb

2016-08-24T09:47:15Z

true

4

GO:0090691

90,691

formation of plant organ boundary

biological_process

The regionalization process that specifies plant organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues.

[ "GOC:tb" ]

null

[]

[ "GO:0048859" ]

[]

[ "GO:0048859" ]

[]

tb

2016-08-24T10:16:28Z

false

true

3

GO:0090692

90,692

mitochondrial membrane scission site

cellular_component

The site on the mitochondrial membrane where the separation of a single continuous mitochondrial membrane into two membranes occurs as a final step in mitochondrial fission.

[ "GOC:bc", "GOC:PARL", "PMID:26618722" ]

null

[]

[ "GO:0110165" ]

[ "part_of GO:0031966" ]

[ "part_of" ]

[ "GO:0031966" ]

[ "GO:0031966", "GO:0110165" ]

[]

tb

2016-08-24T10:46:09Z

false

true

9

GO:0090693

90,693

plant organ senescence

biological_process

A plant organ developmental process during which a plant dismantles cellular components to reclaim the cellular building blocks and nutrients that have been deposited in the plant organs during growth.

[ "GOC:tb", "PMID:17177638", "PMID:34938309" ]

null

[]

[ "GO:0032502" ]

[ "part_of GO:0099402" ]

[ "part_of" ]

[ "GO:0099402" ]

[ "GO:0032502", "GO:0099402" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22725\" xsd:anyURI" ]

tb

2016-08-24T10:50:29Z

false

true

4

GO:0090694

90,694

Scc2-Scc4 cohesin loading complex

cellular_component

A eukaryotically conserved heterodimeric protein complex (comprising adherin and the chromatid cohesion factor MAU2/Scc4/Ssl3) required for the loading of a cohesin, complex onto DNA.

[ "GOC:vw", "PMID:24291789" ]

null

[ "Mis4-Ssl3 cohesin loading complex" ]

[ "EXACT" ]

[]

[ "GO:0032116" ]

[]

[ "GO:0032116" ]

[]

tb

2016-08-24T17:09:11Z

false

true

3

GO:0090695

90,695

Wpl/Pds5 cohesin loading/unloading complex

cellular_component

A eukaryotically conserved heterodimeric protein complex (comprising Wings apart-like protein and the Pds5 Armadillo repeat cohesin associated protein) involved in the loading and unloading of a cohesin complex onto DNA.

[ "GOC:vw", "PMID:26687354" ]

null

[]

[ "GO:0032116" ]

[]

[ "GO:0032116" ]

[]

tb

2016-08-24T17:09:11Z

false

true

7

GO:0090696

90,696

post-embryonic plant organ development

biological_process

Development, taking place during the post-embryonic phase of a plant tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly o...

[ "GOC:tb" ]

null

[]

[ "GO:0009791", "GO:0099402" ]

[]

[ "GO:0009791", "GO:0099402" ]

[]

tb

2016-08-25T16:35:55Z

false

true

8

GO:0090697

90,697

post-embryonic plant organ morphogenesis

biological_process

Morphogenesis, during the post-embryonic phase, of a plant tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as lo...

[ "GOC:tb" ]

null

[]

[ "GO:0090698", "GO:1905392" ]

[ "part_of GO:0090696" ]

[ "part_of" ]

[ "GO:0090696" ]

[ "GO:0090696", "GO:0090698", "GO:1905392" ]

[]

tb

2016-08-25T17:04:35Z

false

true

4

GO:0090700

90,700

maintenance of plant organ identity

biological_process

The process in which the identity of a plant organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.

[ "GOC:tb", "PMID:9090883" ]

null

[]

[ "GO:0045596" ]

[ "part_of GO:0099402" ]

[ "part_of" ]

[ "GO:0099402" ]

[ "GO:0045596", "GO:0099402" ]

[]

tb

2016-08-29T15:01:08Z

false

true

3

GO:0090701

90,701

specification of plant organ identity

biological_process

The regionalization process in which the identity of a plant organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.

[ "GOC:tb" ]

null

[]

[ "GO:0003002" ]

[ "part_of GO:1905393" ]

[ "part_of" ]

[ "GO:1905393" ]

[ "GO:0003002", "GO:1905393" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28016\" xsd:anyURI" ]

tb

2016-08-29T15:09:18Z

false

true

1

GO:0090703

90,703

obsolete triplex DNA unwinding

biological_process

OBSOLETE. The process by which a three-stranded D-loop DNA is unwound or 'melted'.

[ "PMID:26503245" ]

This term was made obsolete because it was created in error.

[]

tb

2016-09-20T16:37:15Z

true

6

GO:0090704

90,704

nicotinate-O-glucosyltransferase activity

molecular_function

Catalysis of the reaction: nicotinate + UDP-D-glucose = O-D-glucosylnicotinate + UDP.

[ "GOC:tb", "PMID:26116607" ]

null

[]

[ "GO:0035251" ]

[]

[ "GO:0035251" ]

[]

tb

2016-09-21T12:46:21Z

false

true

3

GO:0090705

90,705

trichome papilla

cellular_component

A plant cell papilla that is part of a trichome cell.

[ "GOC:tb", "PMID:24014871" ]

Part of trichome cell (PO:0008030).

[]

[ "GO:0090395" ]

[]

[ "GO:0090395" ]

[]

tb

2016-09-26T12:49:36Z

false

true

6

GO:0090706

90,706

specification of plant organ position

biological_process

The regionalization process in which information that determines the correct position at which plant organ primordia are formed is generated and perceived resulting in correct positioning of the new plant organ.

[ "GOC:tb", "PMID:9611175" ]

null

[]

[ "GO:0003002" ]

[ "part_of GO:1905392" ]

[ "part_of" ]

[ "GO:1905392" ]

[ "GO:0003002", "GO:1905392" ]

[]

tb

2016-10-05T12:33:21Z

false

true

2

GO:0090707

90,707

establishment of plant organ orientation

biological_process

The process that determines the orientation of a plant organ or tissue with reference to an axis.

[ "GOC:tb" ]

null

[]

[ "GO:0048560" ]

[ "part_of GO:1905392" ]

[ "part_of" ]

[ "GO:1905392" ]

[ "GO:0048560", "GO:1905392" ]

[]

tb

2016-10-05T12:42:47Z

false

true

6

GO:0090708

90,708

specification of plant organ axis polarity

biological_process

The process in which the polarity of a plant organ axis is specified.

[ "GOC:tb" ]

null

[]

[ "GO:0065001" ]

[ "part_of GO:1905392" ]

[ "part_of" ]

[ "GO:1905392" ]

[ "GO:0065001", "GO:1905392" ]

[]

tb

2016-10-05T12:47:11Z

false

true

6

GO:0090709

90,709

regulation of timing of plant organ formation

biological_process

Any process that modulates the rate, frequency or extent of plant organ formation at a consistent predetermined time point during development.

[ "GOC:tb" ]

null

[]

[ "GO:0040034", "GO:1905428" ]

[]

[ "GO:0040034", "GO:1905428" ]

[]

tb

2016-10-05T12:49:58Z

false

true

4

GO:0090711

90,711

FMN hydrolase activity

molecular_function

Catalysis of the reaction: FMN + H2O = phosphate + riboflavin.

[ "PMID:16183635", "RHEA:35587" ]

null

[ "FMN phosphatase" ]

[ "EXACT" ]

[]

[ "EC:3.1.3.102", "MetaCyc:RXN0-5187", "RHEA:35587" ]

[ "GO:0016791" ]

[]

[ "GO:0016791" ]

[]

[ "skos:exactMatch EC:3.1.3.102", "skos:exactMatch RHEA:35587", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27934\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

tb

2016-10-21T16:27:34Z

false

true

9

GO:0090712

90,712

basal pole of outer hair cell

cellular_component

The end of the outer hair cell which receives and transmits neural signals.

[ "GOC:sl", "PMID:12845523" ]

null

[]

[ "GO:0060187" ]

[]

[ "GO:0060187" ]

[]

tb

2016-11-01T12:57:03Z

false

true

6

GO:0090713

90,713

immunological memory process

biological_process

Any process of the immune system that can contribute to the formation of immunological memory or an immune response based upon activation of immunological memory.

[ "GOC:add", "PMID:26086132", "PMID:26831526" ]

null

[]

[ "GO:0002376" ]

[ "part_of GO:0006955" ]

[ "part_of" ]

[ "GO:0006955" ]

[ "GO:0002376", "GO:0006955" ]

[]

tb

2016-11-11T12:20:30Z

false

true

3

GO:0090714

90,714

innate immunity memory response

biological_process

An immune response mediated by the innate immune system and directed against a previously encountered immunologic stimulus, being quicker and quantitatively better compared with the initial response to that stimulus.

[ "GOC:add", "PMID:26086132" ]

null

[]

[ "GO:0045087", "GO:0090713" ]

[]

[ "GO:0045087", "GO:0090713" ]

[]

tb

2016-11-11T12:23:03Z

false

true

2

GO:0090716

90,716

adaptive immune memory response

biological_process

An immune response directed against a previously encountered antigen, being quicker and quantitatively better compared with the primary response.

[ "GOC:add", "PMID:26831526" ]

null

[]

[ "GO:0002250", "GO:0090713" ]

[]

[ "GO:0002250", "GO:0090713" ]

[]

tb

2016-11-11T12:32:42Z

false

true

8

GO:0090717

90,717

adaptive immune memory response involving T cells and B cells

biological_process

An immune response mediated by reactivated memory T cells and B cells and directed against a previously encountered antigen, being quicker and quantitatively better compared with the primary response.

[ "GOC:add", "PMID:26831526" ]

null

[]

[ "GO:0002460", "GO:0090716" ]

[]

[ "GO:0002460", "GO:0090716" ]

[]

tb

2016-11-11T12:35:19Z

false

true

4

GO:0090719

90,719

adaptive immune effector response involving T cells and B lineage cells

biological_process

An adaptive immune effector response involving T cells and B lineage cells. In the case of B lineage cells, the effector cells are the antibody secreting plasma cells whereas for T cells the effector cells may be helper T cells or cytotoxic T cells.

[ "GOC:add", "ISBN:1405196831" ]

null

[]

[ "GO:0002460", "GO:0090718" ]

[]

[ "GO:0002460", "GO:0090718" ]

[]

tb

2016-11-11T12:43:26Z

false

true

8

GO:0090721

90,721

primary adaptive immune response involving T cells and B cells

biological_process

An adaptive immune response mediated by naive T or B cells against an antigen not previously encountered by immune system.

[ "GOC:add", "PMID:26831526" ]

null

[]

[ "GO:0002460", "GO:0090720" ]

[]

[ "GO:0002460", "GO:0090720" ]

[]

tb

2016-11-11T12:46:29Z

false

true

4

GO:0090723

90,723

obsolete growth cone part

cellular_component

OBSOLETE. Any constituent part of a growth cone, the migrating motile tip of a growing nerve cell axon or dendrite.

[ "GOC:sl", "GOC:tb" ]

null

[]

[ "GO:0030426" ]

[]

tb

2016-11-18T09:36:19Z

true

9

GO:0090724

90,724

central region of growth cone

cellular_component

The center of the migrating motile tip of a growing nerve cell axon or dendrite.

[ "GOC:sl", "PMID:16260607" ]

null

[]

[ "GO:0110165" ]

[ "part_of GO:0030426" ]

[ "part_of" ]

[ "GO:0030426" ]

[ "GO:0030426", "GO:0110165" ]

[]

tb

2016-11-18T12:44:25Z

false

true

1

GO:0090725

90,725

peripheral region of growth cone

cellular_component

The non-central region or periphery of the migrating motile tip of a growing nerve cell axon or dendrite.

[ "GOC:sl", "PMID:16260607" ]

null

[]

[ "GO:0110165" ]

[ "part_of GO:0030426" ]

[ "part_of" ]

[ "GO:0030426" ]

[ "GO:0030426", "GO:0110165" ]

[]

tb

2016-11-18T12:44:25Z

false

true

4

GO:0090726

90,726

cortical dynamic polarity patch

cellular_component

A region of the cell cortex that contains a higher concentration of growth polarity factors than the surrounding cortex and that changes position over time. An example is found in fission yeast cells during early mating, in which the GTPase Cdc42 dynamically to discrete zones within the cortex prior to shmoo formation.

[ "GOC:mah", "PMID:23200991" ]

null

[ "dynamic polarity patch at the cell cortex" ]

[ "EXACT" ]

[]

[ "GO:0110165" ]

[ "part_of GO:0005938" ]

[ "part_of" ]

[ "GO:0005938" ]

[ "GO:0005938", "GO:0110165" ]

[]

tb

2016-11-22T16:17:02Z

false

true

5

GO:0090727

90,727

positive regulation of brood size

biological_process

Any process that increases brood size. Brood size is the number of progeny that survive embryogenesis and are cared for at one time.

[ "GOC:rz" ]

null

[]

[ "GO:0065007" ]

[]

[ "GO:0065007" ]

[]

tb

2016-12-19T15:07:32Z

false

true

4

GO:0090728

90,728

negative regulation of brood size

biological_process

Any process that decreases brood size. Brood size is the number of progeny that survive embryogenesis and are cared for at one time.

[ "GOC:rz" ]

null

[]

[ "GO:0065007" ]

[]

[ "GO:0065007" ]

[]

tb

2016-12-19T15:07:32Z

false

true

5

GO:0090729

90,729

toxin activity

molecular_function

Interacting selectively with one or more biological molecules in another (target) organism, initiating pathogenesis (leading to an abnormal, generally detrimental state) in the target organism. The activity should refer to an evolved function of the active gene product, i.e. one that was selected for. Examples include ...

[ "GOC:pt" ]

null

[ "toxin receptor binding" ]

[ "EXACT" ]

[ "GO:0050827" ]

[ "goslim_generic", "goslim_prokaryote", "goslim_prokaryote_ribbon" ]

[ "Wikipedia:Toxin" ]

[ "GO:0003674" ]

[ "part_of GO:0035821" ]

[ "part_of" ]

[ "GO:0035821" ]

[ "GO:0003674", "GO:0035821" ]

[]

tb

2016-12-19T15:23:27Z

false

true

1

GO:0090730

90,730

Las1 complex

cellular_component

A four subunit complex, that comprises all the necessary RNA processing enzymes (endonuclease, polynucleotide kinase, and exonuclease) to mediate 'cistronic rRNA transcript ITS2 (internal transcribed spacer) cleavage' (GO:0000448).

[ "GOC:vw", "PMID:26638174" ]

null

[ "Las1-Grc3-Rat1-Rai1" ]

[ "NARROW" ]

[]

[ "GO:1902555", "GO:1902911", "GO:1905354" ]

[ "part_of GO:0005829" ]

[ "part_of" ]

[ "GO:0005829" ]

[ "GO:0005829", "GO:1902555", "GO:1902911", "GO:1905354" ]

[]

tb

2017-01-05T16:51:46Z

false

true

2

GO:0090731

90,731

cellular response to very-low-density lipoprotein particle stimulus

biological_process

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very-low-density lipoprotein particle stimulus.

[ "GOC:aruk", "GOC:bc" ]

null

[ "cellular response to VLDL particle stimulus" ]

[ "EXACT" ]

[]

[ "GO:0055094", "GO:0071402" ]

[]

[ "GO:0055094", "GO:0071402" ]

[]

tb

2017-01-31T17:10:08Z

false

true

3

GO:0090732

90,732

cofilin-actin rod

cellular_component

A cellular structure consisting of parallel, hexagonally arranged actin tubules, comprising filamentous actin and disulfide cross-linked cofilin multimers.

[ "GOC:sl", "PMID:22573689", "PMID:24760020" ]

null

[]

[ "GO:0031002" ]

[]

[ "GO:0031002" ]

[]

tb

2017-01-31T17:44:04Z

false

true

4

GO:0090733

90,733

tenascin complex

cellular_component

A homotrimeric or homohexameric extracellular matrix complex involved in cell adhesion and cell migration. In mammals, four complexes exist: Tenascin-C, Tenascin-N (also known as Tenascin-W), Tenascin-X and Tenascin-R.

[ "PMID:10842355", "PMID:11731446", "PMID:12845616", "PMID:17909022", "PMID:23658023" ]

null

[ "Tenascin-C", "Tenascin-N", "Tenascin-R", "Tenascin-W", "Tenascin-X" ]

[ "NARROW", "NARROW", "NARROW", "NARROW", "NARROW" ]

[]

[ "GO:0098637", "GO:0140392" ]

[ "part_of GO:0140149" ]

[ "part_of" ]

[ "GO:0140149" ]

[ "GO:0098637", "GO:0140149", "GO:0140392" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31064\" xsd:anyURI" ]

tb

2017-02-01T16:29:55Z

false

true

4

GO:0090735

90,735

DNA repair complex assembly

biological_process

The aggregation, arrangement and bonding together of a set of components to form a DNA repair complex.

[ "GOC:pg", "PMID:27113759", "PMID:27233470" ]

null

[]

[ "GO:0065003" ]

[]

[ "GO:0065003" ]

[]

tb

2017-02-06T16:42:27Z

false

true

7

GO:0090736

90,736

MATH domain binding

molecular_function

Binding to a meprin and TRAF homology (MATH) domain.

[ "InterPro:IPR002083", "PMID:22621901" ]

null

[]

[ "GO:0019904" ]

[]

[ "GO:0019904" ]

[]

tb

2017-02-06T17:08:28Z

false

true

1

GO:0090740

90,740

obsolete integral component of pigment granule membrane

cellular_component

OBSOLETE. The component of the pigment granule membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

[ "PMID:11294610" ]

This term was obsoleted because it represents protein topology, not a cellular component.

[]

[ "GO:0090741" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23424\" xsd:anyURI" ]

tb

2017-05-16T17:48:35Z

true

1

GO:0090741

90,741

pigment granule membrane

cellular_component

Any membrane that is part of a pigment granule.

[ "PMID:11294610" ]

null

[]

[ "GO:0030659", "GO:0098588" ]

[ "part_of GO:0048770" ]

[ "part_of" ]

[ "GO:0048770" ]

[ "GO:0030659", "GO:0048770", "GO:0098588" ]

[]

tb

2017-05-16T22:33:39Z

false

true

7

GO:0093001

93,001

glycolysis from storage polysaccharide through glucose-1-phosphate

biological_process

The chemical reactions and pathways resulting in the breakdown of a storage polysaccharide into pyruvate through a glucose-1-phosphate intermediate, with the concomitant production of a small amount of ATP and the reduction of NAD to NADH.

[ "GOC:dph", "GOC:glycolysis" ]

null

[]

[ "GO:0000272", "GO:0061622" ]

[]

[ "GO:0000272", "GO:0061622" ]

[]

null

false

true

4

GO:0093002

93,002

response to nematicide

biological_process

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nematicide stimulus. Nematicides are chemicals used to kill nematodes.

[ "GOC:kvm", "PMID:22301316" ]

null

[ "response to antihelmintic", "response to nematocide" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0009636" ]

[]

[ "GO:0009636" ]

[]

null

false

true

3

GO:0095500

95,500

acetylcholine receptor signaling pathway

biological_process

The series of molecular signals generated as a consequence of an acetylcholine receptor binding to one of its physiological ligands.

[ "GOC:mah" ]

null

[ "acetylcholine receptor signalling pathway" ]

[ "EXACT" ]

[]

[ "GO:0098926" ]

[ "has_part GO:0015464", "part_of GO:1905145" ]

[ "has_part", "part_of" ]

[ "GO:0015464", "GO:1905145" ]

[ "GO:0015464", "GO:0098926", "GO:1905145" ]

[]

null

false

true

3

GO:0097001

97,001

ceramide binding

molecular_function

Binding to a ceramide, a class of lipids composed of sphingosine linked to a fatty acid. Ceramides are a major component of cell membranes.

[ "GOC:sart" ]

null

[]

[ "GO:0046625" ]

[]

[ "GO:0046625" ]

[]

pr

2011-03-09T11:34:09Z

false

true

7

GO:0097002

97,002

mitochondrial inner boundary membrane

cellular_component

The portion of the mitochondrial inner membrane that is not invaginated to form cristae. The inner boundary membrane lies parallel to the outer membrane.

[ "GOC:mcc", "PMID:16054341", "PMID:19019989" ]

null

[ "inner bounding mitochondrial membrane" ]

[ "EXACT" ]

[]

[ "NIF_Subcellular:sao18461326" ]

[ "GO:0110165" ]

[ "part_of GO:0005743" ]

[ "part_of" ]

[ "GO:0005743" ]

[ "GO:0005743", "GO:0110165" ]

[]

pr

2011-03-10T04:11:50Z

false

true

2

GO:0097003

97,003

adipokinetic hormone receptor activity

molecular_function

Combining with an adipokinetic hormone to initiate a change in cell activity. Adipokinetic hormones (AKHs) are protein or peptide hormones that are important for sugar and fat homeostasis in metazoa. In insects, they mobilize sugar and lipids from the insect fat body during energy-requiring activities such as flight an...

[ "GOC:sart", "PMID:11904407" ]

null

[ "AKH receptor activity" ]

[ "EXACT" ]

[]

[ "GO:0016500" ]

[ "has_part GO:0055100", "has_part GO:0097004" ]

[ "has_part", "has_part" ]

[ "GO:0055100", "GO:0097004" ]

[ "GO:0016500", "GO:0055100", "GO:0097004" ]

[]

pr

2011-03-14T10:24:08Z

false

true

9

GO:0097004

97,004

adipokinetic hormone binding

molecular_function

Binding to an adipokinetic hormone. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.

[ "GOC:sart", "PMID:11904407" ]

null

[ "AKH binding" ]

[ "EXACT" ]

[]

[ "GO:0017046" ]

[]

[ "GO:0017046" ]

[]

pr

2011-03-14T12:50:02Z

false

true

3

GO:0097006

97,006

regulation of plasma lipoprotein particle levels

biological_process

Any process involved in the maintenance of internal levels of plasma lipoprotein particles within an organism.

[ "GOC:BHF" ]

null

[ "plasma lipoprotein particle homeostasis" ]

[ "NARROW" ]

[]

[ "GO:0050789" ]

[]

[ "GO:0050789" ]

[]

pr

2011-03-15T09:52:53Z

false

true

1

GO:0097007

97,007

4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity

molecular_function

Catalysis of the reaction: (EE)-geranyllinalool + NADPH + O2 = 4,8,12-trimethyl-1,3,7,11-tridecatetraene + NADP+ + 2 H2O. It is unknown whether this reaction proceeds by the direct release of the 4-carbon compound but-1-en-3-one, or whether the substrate is first degraded to C18-farnesylacetone and then cleaved to prod...

[ "GOC:kad", "MetaCyc:RXN-8620", "PMID:21088219" ]

null

[ "4,8,12-trimethyl-1,3,7,11-tridecatetraene synthase activity", "TMTT synthase activity" ]

[ "EXACT", "EXACT" ]

[]

[ "MetaCyc:RXN-8620", "RHEA:13545" ]

[ "GO:0016709" ]

[]

[ "GO:0016709" ]

[]

[ "skos:exactMatch RHEA:13545", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

pr

2011-03-16T04:37:20Z

false

true

6

GO:0097008

97,008

(3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity

molecular_function

Catalysis of the reaction: (E)-nerolidol + NADPH + O2 = (3E)-4,8-dimethylnona-1,3,7-triene + NADP+ + 2 H2O. It is unknown whether this reaction proceeds by the direct release of the 4-carbon compound but-1-en-3-one, or whether the substrate is first degraded to C11-geranylacetone and then cleaved to produce (3E)-4,8-di...

[ "GOC:kad", "MetaCyc:RXN-8619", "PMID:21088219" ]

null

[ "(3E)-4,8-dimethylnona-1,3,7-triene synthase activity", "DNMT synthase activity" ]

[ "EXACT", "RELATED" ]

[]

[ "MetaCyc:RXN-8619" ]

[ "GO:0016709" ]

[]

[ "GO:0016709" ]

[]

pr

2011-03-17T10:38:01Z

false

true

4

GO:0097009

97,009

energy homeostasis

biological_process

Any process involved in the balance between food intake (energy input) and energy expenditure.

[ "GOC:yaf", "PMID:15919751" ]

null

[ "negative regulation of energy homeostasis", "positive regulation of energy homeostasis", "regulation of energy homeostasis" ]

[ "RELATED", "RELATED", "RELATED" ]

[ "GO:2000505", "GO:2000506", "GO:2000507" ]

[]

[ "GO:0048871" ]

[]

[ "GO:0048871" ]

[]

pr

2011-03-21T10:52:44Z

false

true

9

GO:0097010

97,010

eukaryotic translation initiation factor 4F complex assembly

biological_process

The aggregation, arrangement and bonding together of a set of components to form the eukaryotic translation initiation factor 4F complex.

[ "GOC:BHF", "GOC:ebc", "PMID:18337562" ]

null

[ "eIF-4F assembly", "eIF4F assembly" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0065003" ]

[]

[ "GO:0065003" ]

[]

pr

2011-03-21T04:19:26Z

false

true

4

GO:0097011

97,011

cellular response to granulocyte macrophage colony-stimulating factor stimulus

biological_process

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte macrophage colony-stimulating factor stimulus.

[ "GOC:BHF", "GOC:ebc", "PMID:7901744" ]

null

[ "cellular response to GM-CSF stimulus" ]

[ "EXACT" ]

[]

[ "GO:0071345", "GO:0097012" ]

[]

[ "GO:0071345", "GO:0097012" ]

[]

pr

2011-03-21T05:25:06Z

false

true

2

GO:0097012

97,012

response to granulocyte macrophage colony-stimulating factor

biological_process

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte macrophage colony-stimulating factor stimulus.

[ "GOC:pr" ]

null

[ "response to GM-CSF", "response to granulocyte macrophage colony-stimulating factor stimulus" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0034097" ]

[]

[ "GO:0034097" ]

[]

pr

2011-03-22T01:12:15Z

false

true

9

GO:0097013

97,013

phagocytic vesicle lumen

cellular_component

The volume enclosed by the membrane of a phagocytic vesicle.

[ "GOC:rs" ]

null

[]

[ "GO:0071682" ]

[ "part_of GO:0045335" ]

[ "part_of" ]

[ "GO:0045335" ]

[ "GO:0045335", "GO:0071682" ]

[ "GO:0031974", "part_of GO:0045335" ]

[]

pr

2011-03-22T01:44:47Z

false

true

1

GO:0097014

97,014

ciliary plasm

cellular_component

All of the contents of a cilium, excluding the plasma membrane surrounding the cilium.

[ "GOC:BHF", "GOC:cilia", "GOC:dos", "PMID:17895364" ]

Note that we deem cilium and microtubule-based flagellum to be equivalent. Also, researchers consider the composition of both the plasm and the membrane of the cilium to be detectably different from that in the non-ciliary cytosol and plasma membrane (e.g. in terms of calcium ion concentration, membrane lipid compositi...

[ "cilial cytoplasm", "ciliary cytoplasm", "cilium cytoplasm", "cilium plasm", "microtubule-based flagellar cytoplasm", "microtubule-based flagellar matrix", "microtubule-based flagellum cytoplasm", "microtubule-based flagellum matrix" ]

[ "RELATED", "RELATED", "RELATED", "EXACT", "RELATED", "NARROW", "RELATED", "NARROW" ]

[]

[ "GO:0005737" ]

[ "part_of GO:0005929" ]

[ "part_of" ]

[ "GO:0005929" ]

[ "GO:0005737", "GO:0005929" ]

[ "GO:0005737", "part_of GO:0005929" ]

[]

pr

2011-03-23T01:52:31Z

false

true

7

GO:0097015

97,015

obsolete bacterial-type flagellar cytoplasm

cellular_component

OBSOLETE. All of the contents of a bacterial-type flagellum, excluding the plasma membrane surrounding the flagellum.

[ "GOC:BHF" ]

The reason for obsoletion is that this term describes a cellular component that does not exist.

[ "bacterial-type flagellum cytoplasm" ]

[ "EXACT" ]

[]

pr

2011-03-23T01:59:44Z

true

5

GO:0097017

97,017

renal protein absorption

biological_process

A renal system process in which proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686).

[ "GOC:yaf", "PMID:18431508" ]

null

[]

[ "GO:0070293" ]

[]

[ "GO:0070293" ]

[]

pr

2011-03-23T03:13:04Z

false

true

9

GO:0097018

97,018

renal albumin absorption

biological_process

A renal system process in which albumin is taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron.

[ "GOC:yaf", "PMID:18431508" ]

null

[]

[ "GO:0097017" ]

[]

[ "GO:0097017" ]

[]

pr

2011-03-23T03:15:04Z

false

true

4

GO:0097019

97,019

obsolete neurotransmitter receptor catabolic process

biological_process

OBSOLETE. The chemical reactions and pathways resulting in the breakdown of neurotransmitter receptors.

[ "GOC:kmv" ]

The reason for obsoletion is that 'neurotransmitter' is unnecessary grouping in the metabolism branch of the ontology, and it creates true path violations.

[ "neurotransmitter receptor breakdown", "neurotransmitter receptor catabolism", "neurotransmitter receptor degradation" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25736\" xsd:anyURI" ]

pr

2011-03-23T04:16:11Z

true

4

GO:0097020

97,020

COPII receptor activity

molecular_function

Binding specifically to a substance (cargo) to deliver it to a COPII transport vesicle. Cargo receptors span a membrane (either the plasma membrane or a vesicle membrane), binding simultaneously to cargo molecules and coat adaptors, to efficiently recruit soluble proteins to nascent vesicles.

[ "GOC:rb", "PMID:16957051", "PMID:20236934" ]

null

[]

[ "GO:0038024" ]

[]

[ "GO:0038024" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20002\" xsd:anyURI" ]

pr

2011-03-24T04:19:55Z

false

true

5

GO:0097021

97,021

lymphocyte migration into lymphoid organs

biological_process

The movement of a lymphocyte within the lymphatic system into lymphoid organs such as lymph nodes, spleen or Peyer's patches, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.

[ "GOC:BHF", "GOC:pr", "PMID:18379575" ]

null

[ "lymphocyte homing" ]

[ "NARROW" ]

[]

[ "GO:0072676" ]

[]

[ "GO:0072676" ]

[]

pr

2011-03-29T04:26:08Z

false

true

1

GO:0097022

97,022

lymphocyte migration into lymph node

biological_process

The movement of a lymphocyte within the lymphatic system into a lymph node, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.

[ "GOC:BHF", "GOC:pr", "PMID:18379575" ]

null

[ "lymphocyte homing" ]

[ "EXACT" ]

[]

[ "GO:0097021" ]

[]

[ "GO:0097021" ]

[]

pr

2011-03-29T04:29:27Z

false

true

1

GO:0097023

97,023

fructose 6-phosphate aldolase activity

molecular_function

Catalysis of the reaction: D-fructose-6-phosphate = dihydroxyacetone + D-glyceraldehyde-3-phosphate.

[ "GOC:imk", "PMID:11120740", "PMID:21290439" ]

null

[]

[ "RHEA:28002" ]

[ "GO:0016832" ]

[]

[ "GO:0016832" ]

[]

[ "skos:exactMatch RHEA:28002", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

pr

2011-03-29T04:54:05Z

false

true

4

GO:0097025

97,025

MPP7-DLG1-LIN7 complex

cellular_component

A heterotrimeric protein complex formed by the association of MMP7, DLG1 and either LIN7A or LIN7C; regulates the stability and localization of DLG1 to cell junctions.

[ "GOC:BHF", "PMID:17237226" ]

null

[]

[ "GO:0098797" ]

[ "part_of GO:0005912" ]

[ "part_of" ]

[ "GO:0005912" ]

[ "GO:0005912", "GO:0098797" ]

[]

pr

2011-03-30T05:03:33Z

false

true

2

GO:0097026

97,026

dendritic cell dendrite assembly

biological_process

Formation of dendrites, branched cellular projections (or cytoplasmic extension) that are extended from the surface of a dendritic immune cell, and which enable the cell to sample luminal pathogens and increase the surface area for antigen presentation to T cells.

[ "CL:0000451", "GOC:BHF", "PMID:12200351" ]

Note that dendrites of dendritic cells should not be confused with neuronal cell dendrites, which process electrical signals.

[ "dendritic extension" ]

[ "BROAD" ]

[]

[ "GO:0120031" ]

[]

[ "GO:0120031" ]

[]

pr

2011-03-31T04:52:53Z

false

true

9

GO:0097028

97,028

dendritic cell differentiation

biological_process

The process in which a precursor cell type acquires the specialized features of a dendritic cell. A dendritic cell is a leukocyte of dendritic lineage specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.

[ "CL:0000451", "GOC:pr" ]

Note that immunologists typically use the word 'maturation' to refer to dendritic cells undergoing the process that GO describes as 'cell differentiation'.

[]

[ "GO:1903131" ]

[]

[ "GO:1903131" ]

[]

pr

2011-04-01T10:08:42Z

false

true

3

GO:0097029

97,029

mature conventional dendritic cell differentiation

biological_process

The process in which antigen-activated dendritic cells acquire the specialized features of a mature conventional dendritic cell. Mature conventional dendritic cells upregulate the surface expression of MHC molecules, chemokine receptors and adhesion molecules, and increase the number of dendrites (cytoplasmic protrusio...

[ "GOC:BHF", "PMID:15845453" ]

Note that immunologists typically use the word 'maturation' to refer to dendritic cells undergoing the process that GO describes as 'cell differentiation'.

[]

[ "GO:0002573", "GO:0097028" ]

[]

[ "GO:0002573", "GO:0097028" ]

[]

pr

2011-04-01T10:10:22Z

false

true

2

GO:0097030

97,030

CENP-A containing nucleosome binding

molecular_function

Binding to a centromere-specific nucleosome, a form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3).

[ "GOC:jp", "PMID:21412236" ]

null

[ "centromere-specific nucleosome binding", "centromeric nucleosome binding" ]

[ "RELATED", "RELATED" ]

[]

[ "GO:0031491" ]

[]

[ "GO:0031491" ]

[]

pr

2011-04-01T03:19:35Z

false

true

7

GO:0097031

97,031

obsolete mitochondrial respiratory chain complex I biogenesis

biological_process

OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex I, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.

[ "GOC:pr" ]

The reason for obsoletion is that 'biogenesis' as related to a protein is translation, and there is no indication that the members of these complexes are synthesized in a particular way. Historically biogenesis terms were created for some processes when the level of a molecule was changed by an unknown mechanism, for i...

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15173\" xsd:anyURI" ]

pr

2011-04-05T02:53:14Z

true

9

GO:0097032

97,032

obsolete mitochondrial respiratory chain complex II biogenesis

biological_process

OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex II, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.

[ "GOC:pr" ]

The reason for obsoletion is that 'biogenesis' as related to a protein is translation, and there is no indication that the members of these complexes are synthesized in a particular way. Historically biogenesis terms were created for some processes when the level of a molecule was changed by an unknown mechanism, for i...

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15173\" xsd:anyURI" ]

pr

2011-04-05T02:57:33Z

true

5

GO:0097033

97,033

obsolete mitochondrial respiratory chain complex III biogenesis

biological_process

OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex III (also known as cytochrome bc(1) complex or ubiquinol-cytochrome c reductase), a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and...

[ "GOC:mcc" ]

The reason for obsoletion is that 'biogenesis' as related to a protein is translation, and there is no indication that the members of these complexes are synthesized in a particular way. Historically biogenesis terms were created for some processes when the level of a molecule was changed by an unknown mechanism, for i...

[ "mitochondrial cytochrome bc(1) complex biogenesis" ]

[ "EXACT" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15173\" xsd:anyURI" ]

pr

2011-04-05T03:00:31Z

true

8

GO:0097034

97,034

obsolete mitochondrial respiratory chain complex IV biogenesis

biological_process

OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex IV (also known as cytochrome c oxidase complex), a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement a...

[ "GOC:mcc" ]

The reason for obsoletion is that 'biogenesis' as related to a protein is translation, and there is no indication that the members of these complexes are synthesized in a particular way. Historically biogenesis terms were created for some processes when the level of a molecule was changed by an unknown mechanism, for i...

[ "mitochondrial cytochrome c oxidase complex biogenesis" ]

[ "EXACT" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15173\" xsd:anyURI" ]

pr

2011-04-05T03:02:54Z

true

6

GO:0097035

97,035

regulation of membrane lipid distribution

biological_process

Any process that modulates the proportions or spatial arrangement of lipids in a cellular membrane.

[ "GOC:mah", "PMID:18441123", "PMID:20823909" ]

null

[]

[ "GO:0061024", "GO:0065008" ]

[]

[ "GO:0061024", "GO:0065008" ]

[]

pr

2011-04-08T02:01:19Z

false

true

7

GO:0097036

97,036

regulation of plasma membrane sterol distribution

biological_process

Any process that modulates the proportions or spatial arrangement of sterols in the plasma membrane.

[ "GOC:mah", "PMID:18441123", "PMID:20823909" ]

null

[]

[ "GO:0007009", "GO:0097035" ]

[]

[ "GO:0007009", "GO:0097035" ]

[]

pr

2011-04-08T02:08:08Z

false

true

3

GO:0097037

97,037

heme export

biological_process

The directed movement of heme out of a cell or organelle.

[ "GOC:lf", "PMID:15369674", "PMID:20610401" ]

null

[]

[ "GO:0015886" ]

[]

[ "GO:0015886" ]

[]

pr

2011-04-11T10:39:22Z

false

true

4

GO:0097038

97,038

perinuclear endoplasmic reticulum

cellular_component

The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes.

[ "GOC:bf", "GOC:mah", "GOC:mcc", "GOC:pr", "GOC:vw" ]

null

[ "perinuclear ER" ]

[ "EXACT" ]

[]

[ "GO:0110165" ]

[ "part_of GO:0005783", "part_of GO:0048471" ]

[ "part_of", "part_of" ]

[ "GO:0005783", "GO:0048471" ]

[ "GO:0005783", "GO:0048471", "GO:0110165" ]

[]

pr

2011-04-12T10:51:05Z

false

true

6

GO:0097039

97,039

protein linear polyubiquitination

biological_process

A protein ubiquitination process in which a linear polymer of ubiquitin, formed by the amino-terminal methionine (M1) of one ubiquitin molecule and by the carboxy-terminal glycine (G76) of the next, is added to a protein.

[ "GOC:jsg", "GOC:sp", "PMID:21455173", "PMID:21455180", "PMID:21455181", "PMID:31998699" ]

null

[ "M1 linkage" ]

[ "NARROW" ]

[]

[ "GO:0000209" ]

[]

[ "GO:0000209" ]

[]

pr

2011-04-13T01:52:51Z

false

true

4

GO:0097040

97,040

phthiocerol biosynthetic process

biological_process

The chemical reactions and pathways resulting in the formation of phthiocerol, a lipid-based 1,3-glycol consisting of (3S,4R)-3-methoxy-4-methylnonacosane having (9R)- and (11S)-hydroxy substituents.

[ "GOC:dph", "GOC:ecd", "PMID:9201977" ]

null

[ "phthiocerol anabolism", "phthiocerol biosynthesis", "phthiocerol formation", "phthiocerol synthesis" ]

[ "EXACT", "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0008610", "GO:0042845" ]

[]

[ "GO:0008610", "GO:0042845" ]

[]

pr

2011-04-15T01:18:17Z

false

true

4

GO:0097042

97,042

obsolete extrinsic component of fungal-type vacuolar membrane

cellular_component

OBSOLETE. The component of a fungal-type vacuolar membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.

[ "GOC:jh", "PMID:21454883" ]

This term was obsoleted because it represents protein topology, not a cellular component.

[ "extrinsic to fungal-type vacuolar membrane" ]

[ "NARROW" ]

[]

[ "GO:0000329" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23424\" xsd:anyURI" ]

pr

2011-04-19T03:42:39Z

true

9

GO:0097044

97,044

obsolete histone H3-K56 acetylation in response to DNA damage

biological_process

OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone as a result of the detection of DNA damage within a cell.

[ "GOC:pr", "GOC:vw", "PMID:18344406" ]

This term was obsoleted because it represents a molecular function and a GO-CAM model.

[]

[ "GO:0140861" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24261\" xsd:anyURI" ]

pr

2011-04-19T05:22:54Z

true

4

GO:0097045

97,045

phosphatidylserine exposure on blood platelet

biological_process

A phospholipid scrambling process that results in the appearance of phosphatidylserine on the surface of activated blood platelets, and triggers the clotting system.

[ "GOC:bf", "GOC:lf", "GOC:pr", "PMID:21107324" ]

null

[]

[ "GO:0017121", "GO:0030194" ]

[]

[ "GO:0017121", "GO:0030194" ]

[]

pr

2011-04-20T12:54:35Z

false

true

3

GO:0097046

97,046

replication fork progression beyond termination site

biological_process

Regulation of DNA replication by a mechanism that allows a DNA replication fork to progress beyond a termination site, which is a region containing fork pausing elements that influence the progression and merging of DNA replication forks.

[ "GOC:bf", "GOC:mcc", "GOC:pr", "PMID:20797631" ]

null

[]

[ "GO:2000621" ]

[]

[ "GO:2000621" ]

[]

pr

2011-05-03T03:34:01Z

false

true

9

GO:0097047

97,047

DNA replication termination region

cellular_component

A chromosomal region that contains fork pausing elements influencing the progression and merging of DNA replication forks.

[ "GOC:mcc", "GOC:pr", "PMID:20797631" ]

null

[ "TER" ]

[ "EXACT" ]

[]

[ "GO:0110165" ]

[ "part_of GO:0005694" ]

[ "part_of" ]

[ "GO:0005694" ]

[ "GO:0005694", "GO:0110165" ]

[]

pr

2011-05-03T03:38:40Z

false

true

7

GO:0097048

97,048

dendritic cell apoptotic process

biological_process

Any apoptotic process in a dendritic cell, a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.

[ "CL:0000451", "GOC:BHF", "GOC:mtg_apoptosis", "PMID:15059845" ]

null

[ "dendritic cell apoptosis" ]

[ "NARROW" ]

[]

[ "GO:0071887" ]

[]

[ "GO:0071887" ]

[]

pr

2011-05-04T02:18:59Z

false

true

2

GO:0097049

97,049

motor neuron apoptotic process

biological_process

Any apoptotic process in a motor neuron, an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.

[ "CL:0000100", "GOC:BHF", "GOC:mtg_apoptosis", "PMID:14523086" ]

null

[ "motoneuron apoptosis", "motor neuron apoptosis" ]

[ "EXACT", "NARROW" ]

[]

[ "GO:0051402" ]

[]

[ "GO:0051402" ]

[]

pr

2011-05-04T02:21:43Z

false

true

5

GO:0097050

97,050

type B pancreatic cell apoptotic process

biological_process

Any apoptotic process in a type B pancreatic cell, a cell located towards center of the islets of Langerhans that secretes insulin.

[ "CL:0000169", "GOC:BHF", "GOC:mtg_apoptosis", "PMID:16087305" ]

null

[ "pancreatic B cell apoptosis", "pancreatic beta cell apoptosis", "type B pancreatic cell apoptosis" ]

[ "EXACT", "EXACT", "NARROW" ]

[]

[ "GO:1904019" ]

[]

[ "GO:1904019" ]

[]

pr

2011-05-04T02:24:38Z

false

true

6

GO:0097051

97,051

establishment of protein localization to endoplasmic reticulum membrane

biological_process

The directed movement of a protein to a specific location in the endoplasmic reticulum membrane.

[ "GOC:rb", "PMID:9388185" ]

null

[ "establishment of protein localisation in endoplasmic reticulum membrane", "establishment of protein localization in endoplasmic reticulum membrane" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0072599", "GO:0090150" ]

[]

[ "GO:0072599", "GO:0090150" ]

[]

pr

2011-05-04T05:55:26Z

false

true

4

GO:0097052

97,052

obsolete L-kynurenine metabolic process

biological_process

OBSOLETE. The chemical reactions and pathways involving L-kynurenine, the L-enantiomer of the amino acid kynurenine (3-(2-aminobenzoyl)-alanine).

[ "GOC:yaf" ]

This term was obsoleted because it is an unnecessary grouping term.

[ "L-kynurenine metabolism" ]

[ "EXACT" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31172\" xsd:anyURI" ]

pr

2011-05-24T03:28:44Z

true

7