LiteFold/GO · Datasets at Hugging Face

GO:1990852

1,990,852

protein transport along microtubule to spindle pole body

biological_process

The directed movement of a protein along a microtubule to the spindle pole body, mediated by motor proteins.

[ "PMID:25987607" ]

null

[]

[ "GO:0071989", "GO:0098840" ]

[]

[ "GO:0071989", "GO:0098840" ]

[]

vw

2015-09-15T11:09:54Z

false

true

6

GO:1990854

1,990,854

vacuole-ER tethering

biological_process

The attachment of a lytic vacuole to the endoplasmic reticulum, which may facilitate exchange of metabolites between the organelles.

[ "PMID:26283797" ]

null

[ "vacuole-endoplasmic reticulum attachment", "vacuole-endoplasmic reticulum tethering", "vacuole-ER attachment" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0016043", "GO:0051685", "GO:0140056", "GO:1990849" ]

[]

[ "GO:0016043", "GO:0051685", "GO:0140056", "GO:1990849" ]

[]

mcc

2015-09-15T18:50:04Z

false

true

3

GO:1990855

1,990,855

obsolete myo-inositol import across plasma membrane

biological_process

OBSOLETE. The directed movement of myo-inositol from outside of a cell into the intracellular region of a cell across the plasma membrane.

[ "PMID:9560432" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[]

al

2015-09-17T16:52:32Z

true

7

GO:1990856

1,990,856

methionyl-initiator methionine tRNA binding

molecular_function

Binding to methionine-initiator methionine tRNA.

[ "GOC:hjd", "ISBN:9781555810733" ]

An example of this is eukaryotic initiation factor 2 complex, which binds the methionyl-initiator methionine tRNA during ternary complex formation. The non-acylated tRNA is not bound.

[]

[ "GO:0000049" ]

[]

[ "GO:0000049" ]

[]

hjd

2015-09-18T16:56:59Z

false

true

1

GO:1990857

1,990,857

obsolete APC-Fzr1/Mfr1 complex

cellular_component

OBSOLETE. An anaphase promoting complex bound to an activator in the Fzr1 (human)/Mfr1 (pombe) family.

[ "PMID:11493649" ]

This term was made obsolete because it is too fine-grained for GO.

[]

[ "GO:0005680" ]

[]

al

2015-09-22T13:29:11Z

true

5

GO:1990858

1,990,858

cellular response to lectin

biological_process

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lectin stimulus. A lectin is a carbohydrate-binding protein, highly specific for binding sugar moieties.

[ "PMID:25996210", "PMID:26306444" ]

This term refers to endogenous (evolved) responses to lectins (endogenous or exogenous), it does not cover the events that happen due to lectin toxicity.

[]

[ "GO:1990840" ]

[]

[ "GO:1990840" ]

[]

sl

2015-09-24T15:34:42Z

false

true

7

GO:1990859

1,990,859

cellular response to endothelin

biological_process

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an endothelin stimulus. Endothelin is any of three secretory vasoconstrictive peptides (endothelin-1, -2, -3).

[ "PMID:16365184" ]

null

[]

[ "GO:0071375", "GO:1990839" ]

[]

[ "GO:0071375", "GO:1990839" ]

[]

sl

2015-09-24T15:39:48Z

false

true

5

GO:1990860

1,990,860

Pho85-Pho80 CDK-cyclin complex

cellular_component

A cyclin dependent kinase (CDK) complex that contains a kinase subunit and a regulatory cyclin subunit. An example of this complex in budding yeast S. cerevisiae consists of the Pho85 kinase and the Pho80 cyclin.

[ "GOC:rb", "PMID:8108735" ]

null

[]

[ "GO:0000307" ]

[]

[ "GO:0000307" ]

[]

rb

2015-09-24T17:53:50Z

false

true

4

GO:1990861

1,990,861

Ubp3-Bre5 deubiquitination complex

cellular_component

A protein complex that cleaves ubiquitin from specific substrates. In the budding yeast Saccharomyces cerevisiae, this complex consists of Ubp3p and Bre5p.

[ "GOC:rb", "PMID:12778054", "PMID:18391941" ]

null

[ "Ubp3-Bre5 ubiquitin protease complex" ]

[ "EXACT" ]

[]

[ "GO:1905368" ]

[]

[ "GO:1905368" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27929\" xsd:anyURI" ]

rb

2015-09-24T17:56:53Z

false

true

9

GO:1990862

1,990,862

nuclear membrane complex Bqt3-Bqt4

cellular_component

A protein complex that resides in the inner nuclear membrane and anchors telomeres to the nuclear envelope. In fission yeast, it is composed of Bqt3 and Bqt4.

[ "PMID:19948484" ]

null

[]

[ "GO:0098796", "GO:0140513" ]

[ "part_of GO:0005637" ]

[ "part_of" ]

[ "GO:0005637" ]

[ "GO:0005637", "GO:0098796", "GO:0140513" ]

[]

al

2015-09-25T12:14:28Z

false

true

3

GO:1990863

1,990,863

acinar cell proliferation

biological_process

The multiplication or reproduction of acinar cells, resulting in the expansion of a cell population. An acinar cell is a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini (singular acinus).

[ "PMID:9788538" ]

null

[ "acinic cell proliferation", "acinous cell proliferation" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0050673" ]

[]

[ "GO:0050673" ]

[]

sl

2015-09-25T14:26:09Z

false

true

3

GO:1990864

1,990,864

response to growth hormone-releasing hormone

biological_process

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone-releasing hormone stimulus. Growth hormone-releasing hormone regulates the release of growth hormone, as well as some pancreatic ...

[ "PMID:7720628" ]

null

[ "response to GHRF", "response to GRF", "response to growth hormone-releasing factor", "response to sermorelin", "response to somatocrinin", "response to somatoliberin", "response to somatorelin" ]

[ "EXACT", "EXACT", "EXACT", "RELATED", "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0009725" ]

[]

[ "GO:0009725" ]

[]

sl

2015-09-25T14:45:31Z

false

true

6

GO:1990866

1,990,866

obsolete response to sustained hypoxia

biological_process

OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sustained stimulus indicating lowered oxygen tension.

[ "PMID:24055447" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[]

sl

2015-09-25T15:18:11Z

true

9

GO:1990867

1,990,867

response to gastrin

biological_process

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gastrin stimulus.

[ "PMID:10348814" ]

null

[]

[ "GO:0043434" ]

[]

[ "GO:0043434" ]

[]

sl

2015-09-25T16:22:39Z

false

true

2

GO:1990869

1,990,869

cellular response to chemokine

biological_process

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.

[ "PMID:11113082" ]

null

[]

[ "GO:0071345", "GO:1990868" ]

[]

[ "GO:0071345", "GO:1990868" ]

[]

sl

2015-09-25T16:39:55Z

false

true

9

GO:1990870

1,990,870

obsolete protein fibril

cellular_component

OBSOLETE. A polymer of proteins that form a fine fiber.

[ "PMID:12764608" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[]

sl

2015-09-25T17:05:32Z

true

7

GO:1990871

1,990,871

Vma12-Vma22 assembly complex

cellular_component

A protein complex that is involved in the assembly of the V-ATPase complex. In the budding yeast Saccharomyces cerevisiae, this complex consists of Vma12p and Vma22p.

[ "GOC:rb", "PMID:9660861" ]

null

[]

[ "GO:0032991" ]

[]

[ "GO:0032991" ]

[]

rb

2015-09-28T19:03:28Z

false

true

7

GO:1990872

1,990,872

obsolete negative regulation of sterol import by negative regulation of transcription from RNA polymerase II promoter

biological_process

OBSOLETE. Any process that decreases the frequency, rate or extent of sterol import, by down regulation of transcription from an RNA polymerase II promoter.

[ "GOC:rb", "PMID:19793923" ]

This term was obsoleted because it represents a GO-CAM model.

[ "negative regulation of sterol import by activation of transcription from RNA polymerase II promoter", "negative regulation of sterol import by negative regulation of transcription from Pol II promoter", "negative regulation of sterol import by stimulation of transcription from RNA polymerase II promoter", "n...

[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]

[]

rb

2015-09-28T21:22:23Z

true

1

GO:1990873

1,990,873

obsolete intrinsic component of plasma membrane of cell tip

cellular_component

OBSOLETE. The component of the plasma membrane surrounding the cell tip consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the plasma membrane surrounding the cell tip or some other covalently attached group such as a GPI anchor that ...

[ "PMID:20624220" ]

This term was obsoleted because it represents protein topology, not a cellular component.

[]

[ "GO:0031520" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23424\" xsd:anyURI" ]

al

2015-09-29T10:06:25Z

true

3

GO:1990874

1,990,874

vascular associated smooth muscle cell proliferation

biological_process

The multiplication or reproduction of vascular smooth muscle cells, resulting in the expansion of a cell population. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.

[ "PMID:23246467" ]

null

[ "vascular smooth muscle cell proliferation", "VSMC proliferation" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0048659" ]

[]

[ "GO:0048659" ]

[]

sl

2015-09-29T16:34:59Z

false

true

5

GO:1990875

1,990,875

nucleoplasmic side of nuclear pore

cellular_component

The side of the nuclear pore complex (NPC) that faces the nucleoplasm.

[ "PMID:8422679" ]

null

[ "nucleoplasmic side of NPC", "nucleoplasmic side of nuclear pore complex", "nucleoplasmic side of nucleopore" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0110165" ]

[ "part_of GO:0005643" ]

[ "part_of" ]

[ "GO:0005643" ]

[ "GO:0005643", "GO:0110165" ]

[]

sl

2015-10-01T21:32:22Z

false

true

3

GO:1990876

1,990,876

cytoplasmic side of nuclear pore

cellular_component

The side of the nuclear pore complex (NPC) that faces the cytoplasm.

[ "PMID:8422679" ]

null

[ "cytoplasmic side of NPC", "cytoplasmic side of nuclear pore complex", "cytoplasmic side of nucleopore" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0110165" ]

[ "part_of GO:0005643" ]

[ "part_of" ]

[ "GO:0005643" ]

[ "GO:0005643", "GO:0110165" ]

[]

sl

2015-10-01T21:47:54Z

false

true

2

GO:1990877

1,990,877

FNIP-folliculin RagC/D GAP

cellular_component

A heterodimeric complex that functions as a GTPase-Activating Protein (GAP) Complex for members of the Rag family of GTPases. In the budding yeast, this complex contains Lst4 and Lst7, while the orthologous mammalian complex contains follicular (FLCN) and either follicular interacting protein 1 (FNIP1) or FNIP2.

[ "GOC:rn", "PMID:24095279", "PMID:26387955", "PMID:34805795" ]

null

[ "BFC complex", "FLCN-FNIP1 complex", "FLCN-FNIP2 complex", "FNIP-Folliculin RagC/D GAP complex", "Lst4-Lst7 complex" ]

[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:1902773" ]

[]

[ "GO:1902773" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22426\" xsd:anyURI" ]

rb

2015-10-01T22:44:58Z

false

true

1

GO:1990878

1,990,878

cellular response to gastrin

biological_process

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gastrin stimulus.

[ "PMID:10348814" ]

null

[]

[ "GO:0071375", "GO:1990867" ]

[]

[ "GO:0071375", "GO:1990867" ]

[]

sl

2015-10-07T17:38:14Z

false

true

4

GO:1990879

1,990,879

CST complex

cellular_component

A complex formed by the association of Cdc13 (CTC1 in mammals) with Stn1 in yeast (OBFC1 in mammals) and Ten1 protein (also TEN1 in mammals) with single-stranded telomeric DNA. The CST complex plays a role in telomere protection.

[ "GOC:BHF", "GOC:BHF_telomere", "GOC:nc", "PMID:19854130", "PMID:22965356" ]

null

[ "Cdc13-Stn1-Ten1 complex", "CTC1-OBFC1-TEN1 complex" ]

[ "NARROW", "NARROW" ]

[]

[ "GO:0000783" ]

[]

[ "GO:0000783" ]

[]

nc

2015-10-20T13:51:07Z

false

true

1

GO:1990880

1,990,880

cellular detoxification of copper ion

biological_process

Any process that reduces or removes the toxicity of copper ions in a cell. These include transport of copper cations away from sensitive areas and to compartments or complexes whose purpose is sequestration.

[ "PMID:10369673" ]

null

[]

[ "GO:0010273", "GO:0140961" ]

[ "part_of GO:0071280" ]

[ "part_of" ]

[ "GO:0071280" ]

[ "GO:0010273", "GO:0071280", "GO:0140961" ]

[]

al

2015-10-21T14:34:40Z

false

true

8

GO:1990881

1,990,881

obsolete negative regulation of transcription from RNA polymerase II promoter in response to DNA damage

biological_process

OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of DNA damage.

[ "PMID:26150418" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[ "down regulation of transcription from RNA polymerase II promoter in response to DNA damage", "down-regulation of transcription from RNA polymerase II promoter in response to DNA damage", "downregulation of transcription from RNA polymerase II promoter in response to DNA damage", "inhibition of transcription ...

[ "EXACT", "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0000122", "GO:0006974" ]

[]

mcc

2015-10-28T13:02:18Z

true

3

GO:1990882

1,990,882

rRNA acetylation

biological_process

The modification of rRNA structure by addition of an acetyl group to rRNA. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.

[ "PMID:25402480" ]

null

[]

[ "GO:0000154", "GO:1990884" ]

[]

[ "GO:0000154", "GO:1990884" ]

[]

al

2015-10-28T13:24:58Z

false

true

4

GO:1990883

1,990,883

18S rRNA cytidine N-acetyltransferase activity

molecular_function

Catalysis of the reaction: a cytidine in 18S rRNA + acetyl-CoA + ATP + H2O = an N(4)-acetylcytidine in 18S rRNA + ADP + phosphate + CoA + H+.

[ "PMID:25402480", "RHEA:51424" ]

null

[]

[ "RHEA:51424" ]

[ "GO:0008080", "GO:0140102" ]

[]

[ "GO:0008080", "GO:0140102" ]

[]

[ "skos:exactMatch RHEA:51424", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29506\" xsd:anyURI" ]

al

2015-10-28T13:27:35Z

false

true

4

GO:1990884

1,990,884

RNA acetylation

biological_process

The posttranscriptional addition of one or more acetyl groups to specific residues in an RNA molecule.

[ "PMID:25402480" ]

null

[]

[ "GO:0009451" ]

[]

[ "GO:0009451" ]

[]

mah

2015-10-28T16:28:08Z

false

true

6

GO:1990887

1,990,887

obsolete 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol O-methyltransferase activity

molecular_function

OBSOLETE. Catalysis of the reaction: 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol + S-adenosyl-L-methionine = ubiquinol-n + S-adenosyl-L-homocysteine + H+.

[ "PMID:10419476" ]

This term was obsoleted because it represents the same reaction as 3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity ; GO:0010420.

[]

[ "GO:0010420" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26632\" xsd:anyURI" ]

sl

2015-10-28T22:17:54Z

true

2

GO:1990888

1,990,888

2-polyprenyl-6-hydroxyphenol O-methyltransferase activity

molecular_function

Catalysis of the reaction: 2-polyprenyl-6-hydroxyphenol + S-adenosyl-L-methionine = 2-polyprenyl-6-methoxyphenol + S-adenosyl-L-homocysteine + H+.

[ "PMID:10419476" ]

null

[]

[ "GO:0008171" ]

[]

[ "GO:0008171" ]

[]

sl

2015-10-28T22:31:13Z

false

true

1

GO:1990889

1,990,889

histone H4K20me3 reader activity

molecular_function

A histone reader that recognizes a histone H4 trimethylated at lysine 20.

[ "PMID:20943666", "PMID:22150589" ]

Note that the residue position corresponds to the canonical human H4 histone (UniProtKB:P02309); this residue is conserved across all eukaryotes. Note that the initiation methionine is cleaved, so the first residue is S1.

[ "H4K20me3 modified histone binding" ]

[ "NARROW" ]

[]

[ "GO:0140008" ]

[]

[ "GO:0140008" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29730\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30578\" xsd:anyURI" ]

al

2015-10-30T15:43:09Z

false

true

7

GO:1990890

1,990,890

netrin receptor binding

molecular_function

Binding to a netrin receptor.

[ "GOC:kmv", "PMID:8861902", "PMID:9126742" ]

null

[]

[ "GO:0005102" ]

[ "part_of GO:0038007" ]

[ "part_of" ]

[ "GO:0038007" ]

[ "GO:0005102", "GO:0038007" ]

[]

kmv

2015-11-02T22:56:07Z

false

true

9

GO:1990891

1,990,891

mitotic sister chromatid arm separation

biological_process

The cell cycle process in which sister chromatid arms are physically detached from each other during mitosis.

[ "PMID:21633354" ]

null

[]

[ "GO:1903047" ]

[ "part_of GO:0051306" ]

[ "part_of" ]

[ "GO:0051306" ]

[ "GO:0051306", "GO:1903047" ]

[]

mah

2015-11-03T14:01:16Z

false

true

3

GO:1990892

1,990,892

mitotic chromosome arm condensation

biological_process

The cell cycle process in which chromosome arm chromatin structure is compacted prior to and during mitosis in eukaryotic cells.

[ "PMID:21633354" ]

null

[]

[ "GO:0007076" ]

[]

[ "GO:0007076" ]

[]

vw

2015-11-03T14:16:59Z

false

true

7

GO:1990893

1,990,893

mitotic chromosome centromere condensation

biological_process

The cell cycle process in which centromere chromatin structure is compacted prior to and during mitosis.

[ "PMID:21633354" ]

null

[ "mitotic chromosome condensation at kinetochore" ]

[ "EXACT" ]

[]

[ "GO:0007076" ]

[]

[ "GO:0007076" ]

[]

vw

2015-11-03T14:26:29Z

false

true

9

GO:1990894

1,990,894

obsolete positive regulation of induction of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter

biological_process

OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of induction of conjugation with cellular fusion.

[ "PMID:22144909" ]

This term was obsoleted during the TG review process. It should have been created using a template.

[]

al

2015-11-04T20:25:21Z

true

9

GO:1990895

1,990,895

regulation of protein localization to cell cortex of cell tip

biological_process

Any process that modulates the frequency, rate or extent of protein localization to cell cortex of cell tip.

[ "GOC:vw", "PMID:26150232" ]

null

[]

[ "GO:1903066", "GO:1904776" ]

[ "regulates GO:1990896" ]

[ "regulates" ]

[ "GO:1990896" ]

[ "GO:1903066", "GO:1904776", "GO:1990896" ]

[ "GO:0065007", "regulates GO:1990896" ]

[]

vw

2015-11-04T21:53:15Z

false

true

5

GO:1990896

1,990,896

protein localization to cell cortex of cell tip

biological_process

A process in which a protein is transported to, or maintained in, the cell cortex of the cell tip.

[ "PMID:26150232" ]

null

[]

[ "GO:0072697", "GO:1990151" ]

[]

[ "GO:0072697", "GO:1990151" ]

[]

vw

2015-11-05T08:41:49Z

false

true

9

GO:1990897

1,990,897

obsolete CTDK-1 complex

cellular_component

OBSOLETE. A protein complex that phosphorylates serine 2 residues in the CTD domain of productively elongating large subunits of DNA-directed RNA polymerase II, holoenzyme. In S. cerevisiae this complex consists of CTK1/CTK2/CTK3, in S. pombe Lsk1/Lsc1/Lsg1. Human CTK1 homologs include CDK12/13.

[ "PMID:20952539", "PMID:24879308" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[]

al

2015-11-06T01:57:32Z

true

5

GO:1990898

1,990,898

obsolete meiotic DNA double-strand break clipping

biological_process

OBSOLETE. The process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis. Proteins involved in this process include the MRX/MRN complex and Sae2/Ctp1/RBBP8(CtIP).

[ "PMID:26130711" ]

This term was obsoleted because it represents a molecular function.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24639\" xsd:anyURI" ]

al

2015-11-10T17:12:27Z

true

1

GO:1990899

1,990,899

obsolete meiotic DNA double-strand break resectioning

biological_process

OBSOLETE. The process following clipping in double-strand break processing of SPO11 induced breaks, where long-tract single-stranded 3'-end DNA is generated from naked (SPO11 has been removed) 5' ends.

[ "PMID:26130711" ]

This term was obsoleted because it represents a molecular function.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24639\" xsd:anyURI" ]

al

2015-11-10T17:23:07Z

true

2

GO:1990900

1,990,900

ciliary pocket collar

cellular_component

A constriction site at the junction of the plasma, flagellar and flagellar pocket membranes where the flagellum emerges from the cell body. Observed in some unicellular eukaryotic species such as Chlamydomonas, Giardia and Trypanosoma.

[ "GOC:giardia", "PMID:18462016", "PMID:19806154" ]

Note that a 'flagellar collar' is described in Choanoflagellates, but this is different from the ciliary pocket collar found e.g. in Giardia; in Choanoflagellates, a single apical flagellum is surrounded by a collar of 30-40 microvilli.

[ "cilium pocket collar", "flagellar collar", "flagellar pocket collar", "flagellar pore", "flagellum pocket collar", "FPC" ]

[ "EXACT", "RELATED", "EXACT", "RELATED", "EXACT", "RELATED" ]

[]

[ "GO:0110165" ]

[ "part_of GO:0020016" ]

[ "part_of" ]

[ "GO:0020016" ]

[ "GO:0020016", "GO:0110165" ]

[]

pr

2015-11-17T14:43:55Z

false

true

7

GO:1990901

1,990,901

old cell pole

cellular_component

The cell pole distal from the most recent cell division.

[ "GOC:jh2", "PMID:10231492", "PMID:8226658" ]

null

[]

[ "GO:0060187" ]

[]

[ "GO:0060187" ]

[]

pr

2015-11-17T16:42:16Z

false

true

3

GO:1990902

1,990,902

new cell pole

cellular_component

The cell pole proximal to the most recent cell division.

[ "GOC:jh2", "PMID:10231492", "PMID:8226658" ]

null

[]

[ "GO:0060187" ]

[]

[ "GO:0060187" ]

[]

pr

2015-11-17T16:44:53Z

false

true

1

GO:1990904

1,990,904

ribonucleoprotein complex

cellular_component

A macromolecular complex that contains both RNA and protein molecules.

[ "GOC:krc", "GOC:vesicles" ]

null

[ "extracellular ribonucleoprotein complex", "intracellular ribonucleoprotein complex", "protein-RNA complex", "RNA-protein complex", "RNP" ]

[ "NARROW", "NARROW", "EXACT", "EXACT", "EXACT" ]

[ "GO:0030529", "GO:1990903" ]

[ "goslim_pir" ]

[ "Wikipedia:Ribonucleoprotein" ]

[ "GO:0032991" ]

[]

[ "GO:0032991" ]

[]

pr

2015-11-19T12:26:37Z

false

true

6

GO:1990906

1,990,906

accessory outer segment

cellular_component

A cilium-like cell projection emanating from the inner segment and running alongside the outer segment of photoreceptors.

[ "GOC:dph", "PMID:25125189" ]

null

[]

[ "GO:0043005" ]

[]

[ "GO:0043005" ]

[]

dph

2015-11-24T13:56:06Z

false

true

7

GO:1990907

1,990,907

beta-catenin-TCF complex

cellular_component

A protein complex that contains beta-catenin and a member of the T-cell factor (TCF)/lymphoid enhancer binding factor (LEF) family of transcription factors.

[ "GOC:bf", "GOC:PARL", "PMID:11751639", "PMID:16936075", "PMID:20123964", "PMID:21075118", "PMID:9419974" ]

null

[ "beta-catenin/LEF complex", "beta-catenin/lymphoid enhancer binding factor complex", "beta-catenin/T-cell factor complex" ]

[ "NARROW", "RELATED", "RELATED" ]

[]

[ "GO:0090575" ]

[]

[ "GO:0090575" ]

[]

bf

2015-12-01T16:32:44Z

false

true

2

GO:1990908

1,990,908

obsolete Lys63-specific zinc metallopeptidase deubiquitinase activity

molecular_function

OBSOLETE. Hydrolysis of Lys63-Linked ubiquitin unit(s) from a ubiquitinated protein by a mechanism where zinc acts as the nucleophile.

[ "PMID:26368668" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[]

al

2015-12-03T14:25:04Z

true

2

GO:1990909

1,990,909

Wnt signalosome

cellular_component

A multiprotein protein complex containing membrane-localized Wnt receptors and cytosolic protein complexes, which is capable of transmitting the Wnt signal. Contains at least a Wnt protein, LRP5 or LRP6, a member of the Frizzled (Fz) family, Axin and and a Dishevelled (DVL) protein.

[ "GOC:bf", "GOC:PARL", "PMID:22899650", "PMID:25336320" ]

Within the Wnt signalosome, beta-catenin phosphorylation is inhibited through internalization of the signalosome complex, resulting in the sequestration of GSK3-beta into multi-vesicular bodies. No longer phosphorylated and targeted for degradation, beta-catenin is free to enter the nucleus and modulate downstream tran...

[ "LRP5/6 signalosome", "LRP6 signalosome", "Wnt signalosome complex", "Wnt-LRP5/6 signalosome" ]

[ "EXACT", "NARROW", "EXACT", "EXACT" ]

[]

[ "GO:0032991" ]

[ "has_part GO:1990851" ]

[ "has_part" ]

[ "GO:1990851" ]

[ "GO:0032991", "GO:1990851" ]

[]

bf

2015-12-07T14:04:23Z

false

true

2

GO:1990910

1,990,910

response to hypobaric hypoxia

biological_process

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension combined with low atmospheric pressure. Hypoxia is defined as a decline in O2 levels below normoxic l...

[ "PMID:24590457" ]

null

[]

[ "GO:0001666" ]

[]

[ "GO:0001666" ]

[]

sl

2015-12-07T19:34:14Z

false

true

1

GO:1990912

1,990,912

obsolete response to microwave radiation

biological_process

OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a microwave radiation stimulus.

[ "PMID:21241601" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[]

sl

2015-12-07T21:25:08Z

true

4

GO:1990913

1,990,913

sperm head plasma membrane

cellular_component

The plasma membrane that is part of the head section of a sperm cell.

[ "PMID:24478030" ]

null

[]

[ "GO:0098590" ]

[ "part_of GO:0061827", "part_of GO:0097524" ]

[ "part_of", "part_of" ]

[ "GO:0061827", "GO:0097524" ]

[ "GO:0061827", "GO:0097524", "GO:0098590" ]

[ "GO:0098590", "part_of GO:0061827" ]

[]

sl

2015-12-07T23:14:04Z

false

true

5

GO:1990914

1,990,914

obsolete integral component of periplasmic side of plasma membrane

cellular_component

OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the periplasmic side of the membrane.

[ "GOC:bhm", "PMID:15919996" ]

This term was obsoleted because it represents protein topology, not a cellular component.

[]

[ "GO:0098567" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23424\" xsd:anyURI" ]

bhm

2015-12-09T14:38:57Z

true

5

GO:1990915

1,990,915

structural constituent of ascospore wall

molecular_function

The action of a molecule that contributes to the structural integrity of an ascospore wall.

[ "PMID:24623719" ]

null

[]

[ "GO:0005199" ]

[ "occurs_in GO:0005619" ]

[ "occurs_in" ]

[ "GO:0005619" ]

[ "GO:0005199", "GO:0005619" ]

[ "GO:0005198", "occurs_in GO:0005619" ]

[]

al

2015-12-09T19:04:53Z

false

true

5

GO:1990916

1,990,916

Isp3 layer of spore wall

cellular_component

The outermost layers of the spore wall, as described in Schizosaccharomyces pombe.

[ "PMID:24623719" ]

null

[]

[ "GO:0110165" ]

[ "part_of GO:0005619" ]

[ "part_of" ]

[ "GO:0005619" ]

[ "GO:0005619", "GO:0110165" ]

[]

al

2015-12-09T19:07:23Z

false

true

2

GO:1990918

1,990,918

double-strand break repair involved in meiotic recombination

biological_process

The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix that contributes to reciprocal meiotic recombination.

[ "GOC:mah", "PMID:15238514" ]

null

[]

[ "GO:0006302", "GO:1903046" ]

[ "part_of GO:0007131" ]

[ "part_of" ]

[ "GO:0007131" ]

[ "GO:0006302", "GO:0007131", "GO:1903046" ]

[]

al

2015-12-11T01:01:14Z

false

true

7

GO:1990919

1,990,919

proteasome-nuclear membrane anchor activity

molecular_function

The binding activity of a molecule that brings together a proteasome complex and a nuclear inner membrane, to maintain the nuclear membrane localization of the proteasome.

[ "PMID:16096059" ]

null

[ "nuclear membrane proteasome adaptor", "nuclear membrane proteasome anchor", "nuclear membrane proteasome tether", "nuclear membrane proteasome tether activity", "nuclear membrane-proteasome anchor activity", "nuclear membrane-proteasome tether activity", "tethering factor for nuclear proteasome" ]

[ "RELATED", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "RELATED" ]

[]

[ "GO:0043495" ]

[]

[ "GO:0043495" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19119\" xsd:anyURI" ]

vw

2015-12-14T14:01:45Z

false

true

8

GO:1990921

1,990,921

obsolete proteasome localization to nuclear periphery

biological_process

OBSOLETE. A process in which a proteasome is transported to, or maintained in, a location within the nuclear periphery.

[ "PMID:16096059" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[ "proteasome localisation to nuclear periphery" ]

[ "EXACT" ]

[]

mah

2015-12-15T12:02:31Z

true

4

GO:1990922

1,990,922

hepatic stellate cell proliferation

biological_process

The multiplication or reproduction of hepatic stellate cells, resulting in the expansion of a hepatic stellate cell population. Hepatic stellate cells are found in the perisinusoidal space of the liver, and are capable of multiple roles including storage of retinol, presentation of antigen to T cells (including CD1d-re...

[ "GOC:sl", "PMID:15358192", "PMID:18466260" ]

null

[ "hepatic perisinusoidal cell proliferation", "Ito cell proliferation", "perisinusoidal cell proliferation" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0048144" ]

[]

[ "GO:0048144" ]

[]

sl

2016-01-13T23:12:57Z

false

true

5

GO:1990923

1,990,923

PET complex

cellular_component

A protein complex that is composed of at least EXD1, TDRD12 and some PIWI protein. The complex is required for MILI slicing-triggered biogenesis and loading of MIWI2 piRNAs.

[ "PMID:26669262" ]

null

[]

[ "GO:0032991" ]

[]

[ "GO:0032991" ]

[]

sp

2016-01-14T02:19:39Z

false

true

7

GO:1990924

1,990,924

obsolete amphisome membrane

cellular_component

OBSOLETE. The lipid bilayer surrounding the amphisome and separating its contents from the cell cytoplasm.

[ "GOC:bhm", "PMID:17984323" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[ "amphisomal membrane" ]

[ "EXACT" ]

[]

bhm

2016-01-27T13:58:16Z

true

2

GO:1990926

1,990,926

short-term synaptic potentiation

biological_process

The process by which synaptic transmission, induced by the arrival of a spike (action potential) at a synapse, acts to increase the amount of neurotransmitter released in response to the arrival of subsequent spikes. This effect is seen when a train of closely space spikes arrives at a synapse with a low initial releas...

[ "GOC:dos", "GOC:sp", "ISBN:9780071120005", "PMID:11826273", "PMID:26738595" ]

The mechanism of short term potentiation is thought to be either increased influx of calcium into the presynapse (Zucker and Regeh, 2002 PMID:11826273) increased sensitivity to calcium (Jackman et al., 2016 PMID:26738595) or both.

[ "synaptic facilitation" ]

[ "EXACT" ]

[]

[ "GO:0048167" ]

[]

[ "GO:0048167" ]

[]

sp

2016-02-12T13:17:18Z

false

true

9

GO:1990927

1,990,927

calcium ion regulated lysosome exocytosis

biological_process

The process of secretion by a cell that results in the release of intracellular molecules contained within a lysosome by fusion of the vesicle with the plasma membrane of a cell, induced by a rise in cytosolic calcium-ion levels.

[ "PMID:10725327", "PMID:11511344" ]

null

[]

[ "GO:0017156" ]

[]

[ "GO:0017156" ]

[]

sp

2016-02-16T14:19:44Z

false

true

9

GO:1990928

1,990,928

response to amino acid starvation

biological_process

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of amino acids.

[ "PMID:7765311" ]

null

[]

[ "GO:0042594" ]

[]

[ "GO:0042594" ]

[]

sl

2016-02-18T00:18:23Z

false

true

9

GO:1990929

1,990,929

sulfoquinovosidase activity

molecular_function

Catalysis of the reaction: a 6-sulfo-alpha-D-quinovosyldiacylglycerol + H2O = 6-sulfo-alpha-D-quinovose + a 1,2-diacyl-sn-glycerol.

[ "PMID:26878550", "RHEA:49452" ]

null

[]

[ "EC:3.2.1.199", "MetaCyc:RXN-17700", "RHEA:49452" ]

[ "GO:0004553" ]

[]

[ "GO:0004553" ]

[]

[ "skos:exactMatch EC:3.2.1.199", "skos:exactMatch MetaCyc:RXN-17700", "skos:exactMatch RHEA:49452", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30910\" xsd:anyURI" ]

tb

2016-02-19T01:18:37Z

false

true

6

GO:1990930

1,990,930

mRNA N1-methyladenosine dioxygenase activity

molecular_function

Catalysis of the oxidative demethylation of N1-methyladenosine RNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N1-methyladenosine as formaldehyde.

[ "PMID:26863196", "PMID:26863410" ]

null

[ "RNA N(1)-methyladenosine dioxygenase activity", "RNA N1-methyladenosine dioxygenase activity" ]

[ "RELATED", "RELATED" ]

[]

[ "EC:1.14.11.54", "RHEA:49516" ]

[ "GO:0035515" ]

[]

[ "GO:0035515" ]

[]

[ "skos:exactMatch EC:1.14.11.54", "skos:exactMatch RHEA:49516", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/21812\" xsd:anyURI" ]

sp

2016-03-10T08:06:47Z

false

true

5

GO:1990931

1,990,931

mRNA N6-methyladenosine dioxygenase activity

molecular_function

Catalysis of the oxidative demethylation of N6-methyladenosine RNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N6-methyladenosine as formaldehyde.

[ "PMID:22002720", "PMID:26458103" ]

null

[ "mRNA N(6)-methyladenine demethylase", "mRNA N(6)-methyladenosine dioxygenase activity", "RNA N6-methyladenosine dioxygenase activity" ]

[ "EXACT", "EXACT", "RELATED" ]

[]

[ "EC:1.14.11.53", "RHEA:49520" ]

[ "GO:0035515" ]

[]

[ "GO:0035515" ]

[]

[ "skos:exactMatch EC:1.14.11.53", "skos:exactMatch RHEA:49520", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/21812\" xsd:anyURI" ]

sp

2016-03-10T08:10:10Z

false

true

5

GO:1990932

1,990,932

5.8S rRNA binding

molecular_function

Binding to 5.8S ribosomal RNA, a eukaryotic ribosomal RNA which forms a complex with 28S RNA.

[ "PMID:11716358", "PMID:15527424" ]

null

[]

[ "GO:0019843" ]

[]

[ "GO:0019843" ]

[]

sl

2016-03-14T20:25:41Z

false

true

2

GO:1990933

1,990,933

microtubule cytoskeleton attachment to nuclear envelope

biological_process

A process in which the microtubule cytoskeleton is attached to the nuclear envelope.

[ "PMID:14655046", "PMID:20507227" ]

null

[]

[ "GO:0000226" ]

[]

[ "GO:0000226" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23114\" xsd:anyURI" ]

vw

2016-03-17T08:32:37Z

false

true

7

GO:1990934

1,990,934

nucleolus-like body

cellular_component

A nuclear compartment containing significant amounts of non-nucleolar, spliceosomal components. It is commonly found in germinal vesicle (GV) stage oocytes, and is similar to both nucleoli and sphere organelles.

[ "PMID:26226217", "PMID:9021878" ]

null

[ "compact nucleolus", "NLB" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0043232" ]

[ "part_of GO:0031981" ]

[ "part_of" ]

[ "GO:0031981" ]

[ "GO:0031981", "GO:0043232" ]

[]

sl

2016-03-21T21:28:14Z

false

true

2

GO:1990935

1,990,935

splicing factor binding

molecular_function

Binding to a protein involved in the process of removing sections of the primary RNA transcript to form the mature form of the RNA.

[ "PMID:11118435" ]

null

[]

[ "GO:0005515" ]

[]

[ "GO:0005515" ]

[]

sl

2016-03-21T21:57:20Z

false

true

3

GO:1990936

1,990,936

vascular associated smooth muscle cell dedifferentiation

biological_process

The process in which a vascular smooth muscle cell (a non-striated, elongated, spindle-shaped cell found lining the blood vessels) loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, thes...

[ "GOC:BHF", "GOC:BHF_miRNA", "GOC:rph", "PMID:19088079" ]

null

[ "vascular smooth muscle cell dedifferentiation" ]

[ "EXACT" ]

[]

[ "GO:0090678" ]

[]

[ "GO:0090678" ]

[]

tb

2016-03-22T20:25:11Z

false

true

8

GO:1990937

1,990,937

obsolete xylan acetylation

biological_process

OBSOLETE. The addition of one or more acetyl groups to a xylan molecule.

[ "PMID:26745802" ]

The reason for obsoletion is that the term represents a molecular function.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30530\" xsd:anyURI" ]

tb

2016-03-30T22:10:22Z

true

3

GO:1990938

1,990,938

peptidyl-aspartic acid autophosphorylation

biological_process

The phosphorylation by a protein of one or more of its own aspartate amino acid residues, or an aspartate residue on an identical protein.

[ "GOC:bf", "GOC:PARL", "PMID:26134396" ]

null

[ "aspartyl autophosphorylation", "peptidyl-aspartate autophosphorylation" ]

[ "EXACT", "EXACT" ]

[]

[ "gocheck_obsoletion_candidate" ]

[]

[ "GO:0018217", "GO:0046777" ]

[]

[ "GO:0018217", "GO:0046777" ]

[]

bf

2016-04-04T10:49:53Z

false

true

8

GO:1990940

1,990,940

obsolete microtubule sliding involved in mitotic spindle elongation

biological_process

OBSOLETE. The movement of one microtubule along another microtubule involved in mitotic spindle elongation.

[ "PMID:19686686" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[]

vw

2016-04-04T11:06:41Z

true

8

GO:1990941

1,990,941

mitotic spindle kinetochore microtubule

cellular_component

Any of the mitotic spindle microtubules that attach to the kinetochores of chromosomes by their plus ends, and maneuver the chromosomes during mitotic chromosome segregation.

[ "PMID:18256284" ]

null

[]

[ "GO:0005828", "GO:1990498" ]

[]

[ "GO:0005828", "GO:1990498" ]

[]

vw

2016-04-06T13:31:38Z

false

true

9

GO:1990943

1,990,943

obsolete mating type region replication fork barrier binding

molecular_function

OBSOLETE. Binding to the replication fork barrier found in the mating type region of fission yeast.

[ "PMID:18723894" ]

This term was obsoleted because it represents a precomposed term.

[ "RTS1 barrier binding", "RTS1 element binding" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0031634" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31529\" xsd:anyURI" ]

mah

2016-04-06T16:08:43Z

true

3

GO:1990947

1,990,947

exit from meiosis

biological_process

Any process involved in the progression from anaphase/telophase of meiosis II to the creation of end products of meiosis, in which ploidy is reduced by half.

[ "PMID:21389117" ]

null

[ "meiotic exit" ]

[ "EXACT" ]

[]

[ "GO:0044771" ]

[]

[ "GO:0044771" ]

[]

vw

2016-04-21T14:14:15Z

false

true

8

GO:1990949

1,990,949

metaphase/anaphase transition of meiosis I

biological_process

The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis I.

[ "ISBN:0815316194" ]

null

[ "first meiotic metaphase/anaphase transition", "meiosis I metaphase/anaphase transition" ]

[ "RELATED", "EXACT" ]

[]

[ "GO:0044785", "GO:0061982" ]

[]

[ "GO:0044785", "GO:0061982" ]

[]

mah

2016-04-25T15:27:32Z

false

true

5

GO:1990950

1,990,950

metaphase/anaphase transition of meiosis II

biological_process

The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis II.

[ "ISBN:0815316194" ]

null

[ "meiosis II metaphase/anaphase transition", "second meiotic metaphase/anaphase transition" ]

[ "EXACT", "RELATED" ]

[]

[ "GO:0044785", "GO:0061983" ]

[]

[ "GO:0044785", "GO:0061983" ]

[]

mah

2016-04-25T15:28:51Z

false

true

8

GO:1990951

1,990,951

obsolete manchette assembly

biological_process

OBSOLETE. The assembly and organization of the manchette, a tubular array of microtubules, possibly also containing actin filaments, that extends from the perinuclear ring surrounding the spermatid nucleus to the flagellar axoneme.

[ "GOC:krc", "PMID:22319670", "PMID:24440897", "PMID:26792866" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[]

krc

2016-05-11T00:05:35Z

true

5

GO:1990952

1,990,952

obsolete manchette disassembly

biological_process

OBSOLETE. A cellular process that results in the breakdown of a manchette.

[ "GOC:krc", "PMID:22319670", "PMID:24440897", "PMID:26792866" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[ "manchette clearance" ]

[ "EXACT" ]

[]

krc

2016-05-11T00:14:16Z

true

3

GO:1990953

1,990,953

intramanchette transport

biological_process

The movement of vesicles and protein complexes carried out by molecular motors, kinesins and dynein, along the microtubule tracks within the manchette and by myosin along actin filaments.

[ "GOC:krc", "PMID:22319670", "PMID:24440897", "PMID:26792866" ]

null

[ "IMT" ]

[ "RELATED" ]

[]

[ "GO:0031503", "GO:0098840" ]

[ "occurs_in GO:0002177", "part_of GO:0007286" ]

[ "occurs_in", "part_of" ]

[ "GO:0002177", "GO:0007286" ]

[ "GO:0002177", "GO:0007286", "GO:0031503", "GO:0098840" ]

[]

krc

2016-05-11T00:17:56Z

false

true

6

GO:1990955

1,990,955

G-rich single-stranded DNA binding

molecular_function

Binding to G-rich, single-stranded DNA.

[ "GOC:hjd", "PMID:8493094" ]

null

[]

[ "GO:0003697" ]

[]

[ "GO:0003697" ]

[]

hjd

2016-05-13T17:44:28Z

false

true

6

GO:1990956

1,990,956

fibroblast chemotaxis

biological_process

The directed movement of a fibroblast guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).

[ "GOC:dph", "PMID:8760137" ]

null

[]

[ "GO:0060326" ]

[]

[ "GO:0060326" ]

[]

dph

2016-06-02T19:54:19Z

false

true

9

GO:1990957

1,990,957

NPHP complex

cellular_component

A protein complex that is located at the ciliary transition zone and consists of the NPHP4 and NPHP1 proteins. It acts as an organiser of the transition zone inner structure, specifically the Y-shaped links, in conjunction with the MKS complex. It is involved in ciliary protein trafficking and is required for correct f...

[ "GOC:cilia", "PMID:18337471", "PMID:21422230", "PMID:21498478", "PMID:21555462", "PMID:25150219" ]

Although there is some evidence, it's still unclear if the MKS and NPHP complexes are constituent parts of the ciliary Y-shaped links or are simply responsible for aligning and attaching the Y-shaped links to the cilium membrane and axoneme.

[ "NPHP module" ]

[ "EXACT" ]

[]

[ "GO:0032991" ]

[ "part_of GO:0035869" ]

[ "part_of" ]

[ "GO:0035869" ]

[ "GO:0032991", "GO:0035869" ]

[]

pr

2016-06-06T10:59:45Z

false

true

5

GO:1990958

1,990,958

obsolete response to thyrotropin-releasing hormone

biological_process

OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyrotropin-releasing hormone (TRH) stimulus. TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.

[ "PMID:21382270" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[ "response to TRH" ]

[ "RELATED" ]

[]

sl

2016-06-06T21:07:34Z

true

8

GO:1990959

1,990,959

eosinophil homeostasis

biological_process

The process of regulating the proliferation and elimination of eosinophils such that the total number of eosinophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.

[ "PMID:10606160" ]

null

[ "eosinocyte homeostasis", "eosinophilic granulocyte homeostasis", "eosinophilic leucocyte homeostasis", "eosinophilic leukocyte homeostasis" ]

[ "EXACT", "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0001776", "GO:0002262" ]

[]

[ "GO:0001776", "GO:0002262" ]

[]

sl

2016-06-06T22:34:31Z

false

true

4

GO:1990960

1,990,960

basophil homeostasis

biological_process

The process of regulating the proliferation and elimination of basophils such that the total number of basophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.

[ "PMID:10606160" ]

null

[ "basophilic leucocyte homeostasis" ]

[ "EXACT" ]

[]

[ "GO:0001776", "GO:0002262" ]

[]

[ "GO:0001776", "GO:0002262" ]

[]

sl

2016-06-06T22:38:22Z

false

true

7

GO:1990961

1,990,961

xenobiotic detoxification by transmembrane export across the plasma membrane

biological_process

A process that reduces or removes the toxicity of a xenobiotic by exporting it outside the cell.

[ "PMID:28355133" ]

null

[ "drug transmembrane export" ]

[ "NARROW" ]

[]

[ "GO:0046618", "GO:0140115" ]

[ "part_of GO:0098754" ]

[ "part_of" ]

[ "GO:0098754" ]

[ "GO:0046618", "GO:0098754", "GO:0140115" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17141\" xsd:anyURI" ]

sl

2016-06-06T23:47:22Z

false

true

7

GO:1990962

1,990,962

xenobiotic transport across blood-brain barrier

biological_process

The directed movement of a xenobiotic through the blood-brain barrier.

[ "PMID:25053619" ]

null

[ "drug transport across blood-brain barrier" ]

[ "RELATED" ]

[]

[ "GO:0042908", "GO:0150104" ]

[]

[ "GO:0042908", "GO:0150104" ]

[]

sl

2016-06-07T17:39:33Z

false

true

8

GO:1990963

1,990,963

establishment of blood-retinal barrier

biological_process

Establishment of the barrier between the blood and the retina. The blood-retinal barrier is located at two levels, forming an outer barrier in the retinal pigment epithelium and an inner barrier in the endothelial membrane of the retinal vessels. Both these membranes have tight junctions of the 'nonleaky' type.

[ "PMID:25053619" ]

null

[ "establishment of blood-retina barrier", "establishment of BRB" ]

[ "EXACT", "RELATED" ]

[]

[ "GO:0048468" ]

[]

[ "GO:0048468" ]

[]

sl

2016-06-07T21:17:55Z

false

true

5

GO:1990964

1,990,964

actin cytoskeleton-regulatory complex

cellular_component

A protein complex probably required for the internalization of endosomes during actin-coupled endocytosis. Links the site of endocytosis to the cell membrane-associated actin cytoskeleton, coordinating ARP2/3 stimulation at the later stages of endocytosis. Present in the late endocytic coat.

[ "GOC:bhm", "PMID:10594004", "PMID:11739778" ]

An example of this is Pan1 in Saccharomyces cerevisiae (UniProt ID P32521) in PMID:10594004 (inferred from direct assay).

[]

[ "GO:0032991" ]

[]

[ "GO:0032991" ]

[]

bhm

2016-06-09T12:18:30Z

false

true

8

GO:1990965

1,990,965

cytosylglucuronate decarboxylase activity

molecular_function

Catalysis of the reaction: cytosylglucuronic acid + H+ = cytosylarabinopyranose + CO2.

[ "GOC:pr", "GOC:tb", "PMID:23874663" ]

This enzymatic activity was shown to be involved in the bacterial blasticidin S biosynthetic pathway.

[]

[ "GO:0016831" ]

[]

[ "GO:0016831" ]

[]

pr

2016-06-09T13:05:27Z

false

true

6

GO:1990966

1,990,966

ATP generation from poly-ADP-D-ribose

biological_process

The process of generating ATP in the nucleus from poly-ADP-D-ribose. Nuclear ATP generation is required for extensive chromatin remodeling events that are energy-consuming.

[ "PMID:27257257" ]

null

[]

[ "GO:0043170", "GO:0046034" ]

[]

[ "GO:0043170", "GO:0046034" ]

[]

sp

2016-06-16T09:41:35Z

false

true

8

GO:1990967

1,990,967

obsolete multi-organism toxin transport

biological_process

OBSOLETE. The directed movement of a toxin into, out of or within a cell, or between cells where two or more organisms of the same or different species are involved.

[ "GOC:bf", "GOC:PARL", "PMID:18191792", "PMID:22042847" ]

This term was obsoleted because there is no evidence that this process exists.

[ "typhoid toxin transport" ]

[ "NARROW" ]

[]

bf

2016-06-21T09:01:39Z

true

8

GO:1990968

1,990,968

modulation by host of RNA binding by virus

biological_process

A process in which a host organism modulates the frequency, rate or extent of a viral gene product binding to RNA.

[ "GOC:bf", "GOC:PARL", "PMID:25116364" ]

Note that the bound RNA may originate from the virus or another organism, including the host.

[ "modulation by host of viral protein:RNA interaction" ]

[ "RELATED" ]

[]

[ "gocheck_do_not_annotate" ]

[]

[ "GO:0044868" ]

[]

[ "GO:0044868" ]

[]

bf

2016-06-21T11:56:10Z

false

true

3

GO:1990969

1,990,969

obsolete modulation by host of viral RNA-binding transcription factor activity

biological_process

OBSOLETE. A process in which a host organism modulates the frequency, rate or extent of the activity of a viral RNA-binding transcription factor.

[ "GOC:bf", "GOC:PARL", "PMID:25116364" ]

This term was obsoleted because it represents a molecular function.

[ "modulation by host of viral Tat activity" ]

[ "NARROW" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29205\" xsd:anyURI" ]

bf

2016-06-21T12:12:31Z

true

6