PMCID string | Sentences string | ner list |
|---|---|---|
PMC10055960 | Complex 6 showed an increased cytotoxicity when compared to the precursor ligand 2 in the A2780 and OVCAR-3 cell lines, but an overall lower activity when compared to cisplatin. | [
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PMC11116779 | Since the side scatter indicates the internal complexity, i.e., the granularity of the cells, we studied the internalization of PS-NPs in A549 cells by TEM, confirming the internalization by target cells. | [
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PMC5600151 | PPI dendrimers can be based on a 1,4-diaminobutane (DAB) core, but can also be synthesized from an ethylenediamine nucleus and other core molecules by a double Michael addition reaction. | [
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PMC11462673 | Analysis of the GEO dataset GSE13159 unveiled a notably elevated mRNA expression of LDB1 in T-ALL patients compared to bone marrow samples from healthy donors (Fig. 1A). | [
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PMC10671321 | Can asymmetric forms including ColQ1a p.E428HfsX58 be secreted? | [
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PMC9960565 | = 4598.51, m/z found = 4597.5 [M+2H] C238H482N90O92Pt16. | [
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PMC11756937 | In the current study, we included AP staining, viral genome and transgene detection, SA expression of stem cell markers and cytogenomics as direct measures of reprogramming success. | [
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PMC9429973 | We also propose miR-9 as a predictive ABCB1-related biomarker that could be helpful in identifying ABCB1-resistant AML phenotype. | [
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PMC11711935 | PubMed was searched for literature on fibroblast factors, hyperpigmentation, and hypopigmentation, and a comprehensive summary and analysis were performed. | [
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PMC11055510 | The cells were then fixed for 15 min in 5 ml of 4 % paraformaldehyde, an appropriate amount of 1X GIMSA dye solution (Solarbio) was applied, and the cells were incubated for 10–30 min at room temperature. | [
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PMC6799808 | Taken together, our findings reveal that GLPT is able to induce caspase-dependent apoptosis through both the mitochondrial and death receptor pathways. | [
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PMC11534035 | In our study, treating A431 and CAL39 cells with the GPER1 agonist G1 induced rapid estrogen effects within the cells. | [
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PMC11747949 | We also assessed changes of CAIX on 143B cells, a key enzyme for cancer cell survival in hypoxia (Pastorekova and Gillies 2019). | [
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PMC11794568 | The most significant difference in CRIP1 expression was from T1-2 to T4 stage tissues. ( | [
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PMC3995603 | The dorsal skin and one ear of each mouse were removed and fixed in 10% (v/v) natural buffered formalin for 24 hr. | [
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PMC9429973 | The Woman trial showed that the antifibrinolytic tranexamic acid (TXA) reduces PPH deaths. | [
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PMC9429973 | C. Sol Reis, D. Duarte, I. Brito, P. Silva Coelho, L. Leite, R. Branca, S. Roncon, C. Pinho Vaz, A. Campos Bone Marrow Transplantation Service; Celular Therapy Service, Instituto Português de Oncologia do Porto IPO-Porto, Porto, Portugal Background: Graft-versus-host disease (GvHD) is a major complication of allogenic stem-cell transplantation. | [
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PMC10988808 | Using Western blot (WB) analysis, we measured the expression levels of CCDC25 and found that its expression was notably lower in tumor tissues compared to the adjacent normal tissues (Fig. 1H, I). | [
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PMC11680982 | Optimization of neratinib dosing for enhanced CDK4/6 inhibitor combined with endocrine therapy efficacy. ( | [
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PMC11592008 | Secondary antibodies: Goat anti-mouse IgG1 human ads-HRP (dilution 1:2000, 1070-05), rabbit anti-goat IgG(H+L)-HRP (dilution 1:2000, 6160-05), and goat anti-rabbit IgG-HRP (1:5000, 4030-05), all from SouthernBiotech, Birmingham, AL, USA). | [
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PMC11406030 | These peptides show potential to be safe treatment options, either alone or in combination with other therapies, for ovarian cancer. | [
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PMC11088135 | Silencing of lncRNA NUTM2A-AS1 enhanced the levels of miR-376a-3p, leading to reduced cell proliferation and increased apoptosis in glioma cells. | [
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PMC11348300 | However, assessing oxygen at the cellular level, where PpIX is situated, presents a significant challenge. | [
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PMC11574029 | Our findings emphasize the critical role of NOTCH3 in the progression of BLCA and propose NOTCH3 as a potential therapeutic target for BLCA. | [
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PMC8357004 | They may play this role by inhibition of the activity of DNMTs and HDACs. | [
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PMC9100622 | Then, we ran bedGraphToBigWig to convert the file to a binary format (BigWig). | [
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PMC11422497 | Upon querying the circBase database, has_circRNA_103870 (circBase ID: hsa_circ_0072805) was identified to be located on chromosome 5:69206201–69,206,389. | [
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PMC11285179 | Each symbol represents data from a replicate. | [
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PMC10758402 | 786-0 were cultured overnight to reach in a confluency next day. | [
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PMC8777939 | Cell invasion was examined using Matrigel-coated transwell plates. | [
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PMC11476222 | This mixture was also analyzed using LC-MS. | [
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PMC6379402 | In this study, our iCells are based on the widely available tissue expression data. | [
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PMC11782508 | Unbound proteins were removed by washing the column with 2-bed volumes of the equilibration buffer. | [
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PMC8806312 | MTNR1B (melatonin receptor 1B) is the membrane receptor of melatonin. | [
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PMC9429973 | These observations suggest that a sustained high level of guanosine caused by forodesine treatment lead to continuous activation of TLR7 signaling, resulting in cytokine production from APCs. | [
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PMC10747139 | RM175 was the first Ru(II) complex reported to have potential for anticancer activity. | [
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PMC11782508 | The antimicrobial potential of purified azurin was assessed qualitatively against Gram-negative bacteria (E. coli and K. pneumoniae) and Gram-positive bacteria (S. aureus and B. subtilis) using well diffusion assay (Fig. 6). | [
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PMC9429973 | Excessive activation or insufficient control of C5 is believed to play a role in the pathogenesis of paroxysmal nocturnal hemoglobinuria (PNH), atypical hemolytic uremic syndrome (aHUS), generalized myasthenia gravis (gMG), and neuromyelitis optical spectrum disorder (NMOSD). | [
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PMC9960565 | Cultures were conducted at 37°C, in a humidified atmosphere of 5% CO2, in 96-well plates (seeding density = 1 × 10 cells/well), using adequate culture media complemented with fetal bovine serum (FBS) 10% (v/v) and antibiotic-antimycotic (AA, 100x solution) 1% (v/v). | [
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PMC10587429 | hCD68+ human macrophages were only shown in tumors from huNSG-SGM3 mice. | [
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PMC11244823 | While these three fragments are all thought to be secreted to the cell culture supernatant during transient expression in transfected cell cultures, the original molecule (gD1_402) will remain predominantly cell-associated, anchored through its transmembrane domain and cytoplasmic tail (see S3 Fig). | [
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PMC11574029 | BLCA cells were co-transfected with the reporter plasmid and either NOTCH3 overexpression plasmid or NOTCH3 small interfering RNAs. | [
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PMC7039683 | All the cell lines used in this study were tested for mycoplasma contamination and authenticated by genetic profiling using polymorphic short tandem repeats. | [
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"All",
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PMC11126803 | Data are presented as mean ± SD. | [
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PMC11746948 | APT2 (encoded by LYPLA2), a known protein acyltransferase (PAT) involved in depalmitoylation, was identified as an interacting partner of GPX4 (Fig. 5a). | [
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PMC10810426 | This supports the observation that APOBEC3G deaminates cytoplasmic reverse transcripts and that cytoplasmic nucleic acid sensors respond to MLV RNA/DNA hybrids and reverse transcribed DNA . | [
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PMC11545737 | Of note, GBP2 ablation was sufficient to prevent pyroptosis triggered by E. coli OMVs but not that triggered by Salmonella OMVs . | [
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PMC2193049 | The eluate was dialysed for 24 h at 4°C against 20 mM Tris–HCl (pH 7.6) and concentrated to 4 mg/ml. | [
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PMC7841067 | Animal procedures were carried out according to a protocol approved by the Institutional Animal Care and Use Committee at Huaihe Hospital of Henan University. | [
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PMC11748335 | Oncogenes are reported to be enriched in BGRDs . | [
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PMC9429973 | Image: Summary/Conclusion: Taken together, we established a multiplex protocol for in vivo therapy trials that allows simultaneous testing of up to 5 PDX samples in competitive in vivo trials. | [
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PMC11021472 | Both shRNAs induced a clear knockdown of the circZDHHC11 transcript levels without affecting the levels of lncZDHHC11 and pcZDHHC11 transcripts (Supplemental Fig. 4 A,B). | [
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PMC11453018 | The ATP assay data are represented as mean ± SEM; p<0.05, by two-way ANOVA. | [
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PMC10578720 | Additionally, it was found that the expression of IL-10 and inhibitory cell surface molecules of monocytes in patients with chronic HBV was significantly higher than in healthy individuals. | [
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PMC11731161 | D The Venn diagram illustrates the overlap between the XPO1 interacting proteins identified by IP-MS and the prediction results obtained from UbiBrowser. | [
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PMC9429973 | No pt had Gr ≥3 CRS or discontinued treatment due to CRS. | [
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PMC11534035 | The cell proliferation in A431 cells treated with G1 showed a dose dependent reduction at the tested concentrations. | [
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PMC11419566 | P. cocos contains polysaccharides, triterpenoids, sterols, and other chemical components. | [
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PMC11655536 | Tumor cells enhance the utilization of glucose, glutamine, and other substances to produce a large amount of lactic acid and H, and MM is no exception . | [
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PMC11746948 | These inhibitors, along with LOC1886 which also binds covalently to C66, induce a conformational alteration in GPX4, leading to its degradation via a mechanism that remains to be elucidated. | [
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PMC11194678 | It was observed that the translation factor poly(A) tail-binding protein C1 (PABPC1) (Passmore and Coller, 2022) and large ribosomal subunit protein L7a (RPL7a) (Hemmerich et al., 1993) were well colocalized with endogenous STAU1 puncta in both HepG2 and COS7 cells (Fig. 3, G and H), indicating that STAU1 condensate promote translation of its target mRNAs by recruiting and enriching multiple components of the translation machinery. | [
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PMC11489175 | ML323 is a USP1 inhibitor that showed interesting antiproliferative activity on ovarian cancer cells by blocking S-phase cell-cycle 121. | [
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PMC11381192 | CCK‐8 assay was conducted to assess the cell viability after stable transfection. | [
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PMC11401350 | This could be explained by fact that the CD4 receptor is upregulated upon TCR stimulation and therefore anti-CD4 CAR binding to the CD4 T cells is more efficient, inducing their elimination more effiently. | [
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PMC11754432 | Punch biopsies (6 mm) were taken, fixed in 4% PFA and paraffin embedded. | [
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PMC11541241 | Previous research showed that nitrogen limitation was proposed to be a decisive signal to promote the expression of pathogen virulence genes (López‐Berges et al., 2010a, 2010b). | [
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PMC6799808 | While it is probable that G. lucidum extracts may impact each of these individual signaling molecules depending on the cell types and/or experimental conditions, it seems more conceivable that G. lucidum extracts may target certain major targets directly, subsequently influencing the abovementioned targets indirectly. | [
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PMC11705862 | To further study the cellular localization of IRIS-1 and 2 in the human brain, we focused on three major cell populations: microglia, astrocytes, and neurons. | [
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PMC11488203 | Eventually, MSC can also fuse with cancer cells in vitro and in vivo by the formation of new cancer hybrid cells displaying increased tumor plasticity associated with completely new tumorigenic and metastatic properties . | [
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PMC11746942 | The primary antibodies used included anti-phospho-STAT3 (Tyr705) (Cell Signaling Technology, 9145), anti-STAT3 (Cell Signaling Technology, 12640), anti-Ki67 (Beyotime, AF1738), anti-Keratin 16 (Santa Cruz Biotechnology, sc-53255), anti-Keratin 17 (Cell Signaling Technology, 12509), and anti-CD130 (Thermo Fisher Scientific, PA5-28932). | [
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PMC9429973 | Myeloid-cell intrinsic circadian clock components control inflammatory cytokine production (Gibbs et al. 2012; Curtis et al. 2015; Bellet et al. 2013), and metabolic inputs influence lethality in response to LPS (Wang et al. 2016; Weis et al. 2017; Traba et al. 2017), but the relative contributions of these inputs to daily changes in sepsis susceptibility are not known. | [
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PMC7802142 | The total protein concentration was determined by BCA protein assay (Pierce, USA). | [
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PMC6160470 | of three individual experiments performed in quadruplicates) on indicated cell lines, along with the calculated ALOGP values for each structure. ( | [
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PMC9429973 | When necessary, the genetic diagnosis of hemoglobinopathies was performed by t-NGS. | [
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PMC10656496 | Treated experimental wells were normalized to untreated wells for a given cell line. | [
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PMC8973725 | The χ test was used to analyze the differences in the expression pattern of RNA between the ccRCC and normal renal tissue groups and the relationship between ZNF677 expression and clinicopathological variables. | [
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PMC11672142 | The EDS detector was a DRY SD30 (JEOL Ltd.). | [
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PMC10170482 | Such models do not account for the additional mechanical cue that arises from 3D culturing itself: pressure of neighboring cells. | [
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PMC8632470 | The materials used were HEK293 cell line (ATCC CRL-1573™), a collection of the Cell and Molecular Biology Laboratory, Faculty of Pharmacy, Universitas Padjadjaran. | [
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PMC11335267 | E-J) Blood glucose levels observed during glucose tolerance tests performed after an overnight fast (E-G) or during insulin tolerance tests performed after a 4-hour fast (H-J) (n = 6 per group). | [
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PMC9739791 | One of the first Pt(IV) prodrugs conjugated with photoactive ligand pyropheophorbide a (PPA), was reported by Wang et al. (Figure 4). | [
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PMC9111184 | Atherosclerosis is the major cause of myocardial infarctions and ischemic strokes. | [
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PMC11473750 | In our studies, immunofluorescence staining showed that RNF121 co-localized preferentially with the GM130 protein in the cis-Golgi network, but minimally with Golgin97 of the trans-Golgi or with protein disulfide isomerase (PDI) of the endoplasmic reticulum (Fig. 2a and Supplementary Fig. S2a), indicating that RNF121WT protein was located on the Golgi complex in neuroblastoma cells. | [
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PMC11678448 | The bacteria were verified through a 16S rRNA PCR. | [
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PMC11088135 | Mechanistic studies have shown that lncRNAs act as sponges for competing endogenous RNAs (ceRNAs), regulating the function of microRNAs (miRNAs), thus forming a complex regulatory network involved in tumour development . | [
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PMC9429973 | Efficacy endpoints include change in lactate dehydrogenase (LDH), transfusion avoidance and hemoglobin stabilization (both assessed in 24-week intervals), and breakthrough hemolysis (BTH). | [
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PMC11777207 | Antibodies that block only PD-L1:CD80 cis interactions are intended to bolster PD-L1:PD-1 signaling while limiting activation of T cells. | [
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PMC11098378 | Recombinant GST-IpaH4 for in vitro experiments was expressed and purified as previously described for other IpaH proteins . | [
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"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Recombinant",
"GST-IpaH4",
"for",
"in",
"vitro",
... |
PMC10900886 | We did not observe VP1 cells in cells inoculated with heat-inactivated virus (Fig. S2). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"We",
"did",
"not",
"observe",
"VP1",
"cells",
"i... |
PMC11748335 | We observe that in cancer cell lines, including those from esophageal and breast cancer, long LOCKs shift from short-PMDs to intermediate-PMDs and long-PMDs. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tok... |
PMC11773391 | Furthermore, the results of MTT assays showed a significant increase in IC50 value in the MGMT OE group compared with that of the control and vector groups (Figure 4C). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11089031 | G The OE of ZNF692 promoted the migration of Caki-1 cells. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O"
],
"tokens": [
"G",
"The",
"OE",
"of",
"ZNF692",
"promoted",
"the",
"migration",
"of",
"Caki... |
PMC11401350 | Bone marrow (BM) was isolated from the tibia of C57BL/6 mice. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O"
],
"tokens": [
"Bone",
"marrow",
"(",
"BM",
")",
"was",
"isolated",
"from",
... |
PMC9429973 | Except from the analysis of gene expression, we performed TCR repertoire analysis using VDJtools, an open-source Java/Groovy-based framework that can analyze immune repertoire sequencing (RepSeq) data and allows applying a diverse set of post-analysis strategies. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11740207 | Research on the HE in human EpibCs, encompassing the processes of SD and AD, remains active. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Research",
"on",
"the",
"HE",
"in",
... |
PMC11767725 | In contrast, rosacea exhibited a weaker association with MetS, with an odds ratio (OR) of 1.56 (95% CI: 0.96–2.52). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9429973 | The statistical difference between groups was performed using log-rank test. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"statistical",
"difference",
"between",
"groups",
"was",
"performed",
"using",
"log-rank",
... |
PMC6684588 | P ≤ 0.001 vs. vehicle-injected muscle by unpaired t-test. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"P",
"≤",
"0.001",
"vs.",
"vehicle-injected",
"muscle",
"by",
"unpaired",
"t-test",
"."
]
}
] |
PMC11473843 | Here we revealed two FAK interactors, extracellular-signal-regulated kinase 5 (ERK5) and cyclin-dependent kinase 5 (CDK5), as key players underlying FAK-mediated maintenance of KRAS mutant NSCLC. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11725127 | In addition to the CETSA results, the drug affinity-responsive target stability assay showed that GA could prevent the pronase-mediated digestion of USP2 in a dose-dependent manner (Supporting Information Fig. S4). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
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