PMCID string | Sentences string | ner list |
|---|---|---|
PMC11656048 | Collectively, our findings indicated that shikonin induced OS cells ferroptosis through Nrf2/xCT/GPX4 regulatory axis, which might shed light on exploiting shikonin as a promising candidate for the future OS therapy. | [
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PMC11746942 | The quantification of S1PR3 protein levels is shown below each blot. | [
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PMC9429973 | At a median follow-up of 25.1 months, D-Vd prolonged PFS versus Vd alone (median: 14.8 vs 6.3 months; hazard ratio [HR], 0.35; 95% confidence interval [CI], 0.24-0.51; P <0.00001). | [
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PMC10761571 | Therefore, triggering the extrinsic apoptosis leads to the initiation of the intrinsic pathway as well . | [
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PMC9545714 | Also, the subject's hair was off their face, jewelry removed, and a black drape used to standardize clothing. | [
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PMC3164356 | WT, wild type; Mut, mutant; Bov, bovine. ( | [
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PMC10093184 | After 21 days of cultivation, distinct colonies of different sizes and cell densities were formed by COS3600B, COS4288, and D-17 cells (Figure 2) . | [
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PMC9429973 | It is imperative that heparin be avoided in these patients. | [
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PMC11453018 | Upon broadening our panel of senescence-related markers, we noted a considerable decrease in LMNB1 expression in all ES cell lines or xenograft tumors treated with iP300w (Figs. 2I and 5B). | [
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PMC11319300 | First, we confirmed that the active enhancer chromatin state that was observed in B cells (Mikulasova et al., 2022) using BLUEPRINT data (Carrillo-de-Santa-Pau et al., 2017) could be validated with other datasets. | [
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PMC11742231 | Extensive experiments and case studies validate its effectiveness in discovering novel miRNA-disease associations. | [
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PMC11644761 | Growing evidence supports the involvement of aberrant DNA methylation in the disruption of key processes such as the development, proliferation, differentiation, and maintenance of oligodendrocyte cells, which are often impaired in neurodegenerative diseases . | [
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PMC11746942 | To identify the specific G protein subtype involved in S1PR3-mediated STAT3 activation, we used inhibitors for Gαi/PKA (H89), Gαq/PLC (U73122), and Gα12/13/RhoA (Rhosin hydrochloride) (Fig. 6D). | [
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PMC8557138 | These tumor PDOs when cultured adjacent to the vascular network showed profound angiogenic response for as long as 22 days. | [
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PMC11300639 | g–i 786-O cells were transfected with the indicated plasmids or siRNAs for 48 h, or treated with Palbociclib (5 μM) for 24 h. Cells were treated with CHX, and cells were collected for western blotting analysis at different time points. | [
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PMC6024716 | The results show that the OAZ1 gene was functionally knocked out in both the 775–1 and 775–3 cell lines. | [
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PMC6024716 | This observation is different from the initial results obtained from the siRNA silencing of the OAZ1 gene, in which there was no increase in luciferase mRNA . | [
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PMC9429973 | The most common grade 3+ AEs and those of special interest were neutropenia (KRd 47%; R 59%), thrombocytopenia (KRd 13%; R 7%), infections (KRd 15%; R 6%), cardiovascular toxicities (KRd 4%, R 5%), and secondary malignancies (KRd 2, R 2). | [
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PMC5035325 | The approach was the combination of the tumor-cell oncosis and antibody dependent cell-mediated cytotoxicity by 14F7 mAb with the inhibition of proliferation, pro-apoptosis effect and the involvement of T cells in the antitumor activity of 7A7 mAb . | [
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PMC11723947 | Naive CD4 T cells isolated from these mice exhibited almost complete deletion of HP1γ, with no compensation by overexpression of the two other HP1 isoforms, the methyltransferases targeting H3K9 or the transcriptional co-repressor TRIM28 (Figure. | [
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PMC7185206 | Cell survival was measured by trypan blue staining. | [
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PMC9429973 | Total cellular RNA was isolated from peripheral blood granulocytes of 141 primary and secondary MF patients and 28 HDs, and we performed Gene expression profiling (GEPs) by microarray platform. | [
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PMC10033453 | A p value of <0.05 was considered statistically significant. | [
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PMC11064533 | We have taken advantage of the unique ability of this strain and characterized it using omics technologies. | [
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PMC11394386 | Finally, PTEN promoter (Supplementary Table S1) was amplified by RT-PCR by standard conditions and then analyzed by electrophoresis on 1.5% agarose gel. | [
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PMC11335267 | Since the effect of D-Trp8-γMSH on food intake is transient and does not last for more than a few hours , and the data in Fig. 8E represent cumulative food intake from the time of agonist administration, the differences observed at 12 h reflect the constitutive decrease in food intake of Alx3-deficient mice as compared... | [
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PMC6617630 | Val cells (THL) showed robust MYC mRNA suppression by I-BET, JQ1, and OTX as compared to that observed in LY1 (DHL) (Fig. 4a, b). | [
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PMC11615101 | The level of α-Taxilin was measured in RA (n = 106), OA (n = 96), HC (n = 30), and SLE (n = 8) patients using an enzyme-linked immunosorbent assay (ELISA) kit (Elabscience, USA), and the level of ACPA in plasma samples in patients with RA (n = 18) was measured using the ACPA ELISA kit (Fine test, USA). | [
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PMC9429973 | Sensitivity to chemoresistance was measured by flow cytometry. | [
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PMC4355729 | In summary, our study suggests that PIK3R1 is down-regulated in RCC, especially in advanced and metastatic RCC. | [
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PMC8633974 | GFP LNP treatment to the cells showed readily detectable GFP expression in both U1 and JLat cell lines affirmed by the shift of population intensities for GFP recorded cells. ( | [
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PMC11531735 | Furthermore, we conducted an in vivo assay employing JIMT-1 cells, which originated from a pleural metastasis in a breast cancer patient clinically resistant to trastuzumab. | [
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PMC11607764 | PTBP1 was overexpressed in renal cell carcinoma clinical tissues and significantly associated with tumor size, pathological metastasis status and 5-year overall and disease-specific survival. | [
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PMC7192625 | Capture Hi-C is a variation of the Hi-C protocol that enables studying interactions involving a set of specific non-abundant regions of the genome, for example gene promoters (8). | [
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PMC9429973 | At diagnosis: median PLAT = 26 G/L [0 to 134 G/L], 31% of p. with bleedings. | [
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PMC8777939 | Conditioned media were collected and mixed with acetone at a 1:4 ratio and then stored at −80 ℃ for 1 h. The mixture was centrifuged at 12,000 rpm for 30 min, and the supernatant was removed and eluted with Pierce IP buffer (Thermo Fisher Scientific). | [
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PMC11544122 | Data were analyzed by one-way ANOVA, followed by Dunnett’s multiple comparison test compared to Con. | [
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PMC11474209 | Disadvantage - The operating procedure is intricate; the expense is considerable. | [
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PMC11741906 | In contrast, survival data for hsa-miR-15b and hsa-miR-625 showed that high expression of these two miRNAs correlates with better overall survival of ovarian cancer patients (Fig. 7). | [
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PMC7185206 | Tumor-derived sPD-L1 induces activated human CD8 + T cell death and competes with PD-(l)1 inhibitors for effect on CD8 + T cells. | [
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PMC9065483 | However, upon addition of gefitinib, the concentration of nuclear phosphorylated STAT1 decreased markedly. | [
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PMC9621239 | A total of 1 × 10 Huh 7 cells stably transfected with Lv-Vector, Lv-HBx-WT, Lv-HBx-SM, Lv-HBx-DM or Lv-TM in 100 μl phosphate buffer solution was independently injected subcutaneously into the right-back of eight nude mice. ( | [
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PMC10759659 | The plausibility of ARID1A as a biomarker was confirmed by Jiang et al. through pan-cancer analysis using an online database . | [
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PMC10728200 | D–F Western blot analysis of the protein levels of Ki-67, KIT, STUB1, GPX4, and 4-HNE in GIST cell xenograft tumor tissues of mice from vehicle (DMSO), IM, RSL3, and combination treatment groups. | [
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PMC11802929 | In Fig. 2c (left) we provide a sequence logo representation of the 9-mer SCTs that were or were not expressed, and those expressed as SCTs that did or did not capture cells (Fig. 2c right). | [
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PMC5311252 | The overlap between the analyses was also not complete as illustrated by E2F1, which was not identified by mass spectrometry. | [
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PMC10154881 | Each oncolytic virus has its own cell tropism that is dependent on its receptor and the characteristics of virus and cancer cells. | [
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PMC11786767 | Regular immunostaining was performed as described previously (50). | [
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PMC9429973 | 6 patients with Ph-positive ALL (75.0%) continued therapy with tyrosine kinase inhibitors (TKI). | [
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PMC11306331 | NIH3T3 and HEK293T cells were obtained from the Lim lab (UCSF) and validated by STR profiling (ATCC). | [
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PMC11683130 | IL-23 plays an significant role in the survival and proliferation of Th17 and Th22, and the Th17 pathway mediated by IL-23 is considered to be the main pathway in psoriasis (13). | [
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PMC11790971 | For each passage, cells were placed in a 96-well plate for imaging (Fig. S3). | [
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PMC11718109 | These vesicles were enriched in neurite varicosities but were much sparser than the other two populations described above. | [
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PMC11740207 | Despite these challenges, recent advancements in sequencing technologies offer promising avenues to overcome the limitations associated with VSELSC isolation and analysis. | [
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PMC3730428 | AT-IAP also induces apoptosis in the breast cancer cell lines EVSA-T and MDA-MB-231, which are sensitive to cIAP1 inhibition (Supplementary Figure 1B). | [
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PMC9822769 | As already reported in the Introduction, molecules with reasonable lipophilicity are generally prone to cross the lipid bilayer membrane by simple energy-independent passive diffusion. | [
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PMC11720107 | In the CACO-2 cell line, extracts from all studied cultivars (Harnaś, Ornak, Violeta, and Morado) similarly decreased both PPARγ and LC3A mRNA and protein expression. | [
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PMC9429973 | Also, COVID-19 infections after vaccine availability were more frequent in unvaccinated pts (37.4 vs. 6.3%, p<0.001). | [
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PMC7887261 | Future extremely large-scale multi-ancestry studies may also provide additional opportunities to assess ancestry-specific predisposing variants, and discover new genetic alterations with relatively large attributable risk for LC. | [
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PMC9429973 | 2-yr RFS was also superior in the LIT with VEN group (62%) as compared with the IC or LIT without VEN groups (54% and 42%, respectively). | [
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PMC11473843 | FAK inhibition in genetically engineered KRAS-driven mouse cancer models led to the regression of lung adenocarcinomas (Konstantinidou et al, 2013). | [
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PMC11737091 | Compared with that in adjacent tissues, DBF4 expression was upregulated in most ccRCC tumor tissues (Fig. 2A, B). | [
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PMC11754784 | The samples were incubated at 37 °C for 3 h. After incubation, the samples were transferred into 1.5 ml tubes and centrifuged for 10 min at 5000 rpm. | [
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PMC10745221 | The leftmost panel shows a Coomassie-stained SDS-PAGE gel. | [
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PMC10142392 | Previous research on this copolymer has demonstrated its ability to generate vesicles, with a controlled drug release up to two weeks . | [
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PMC11394227 | Then, 50 μL of the cleavage supernatant to be measured was added to 40 μL of detection buffer, and 10 μL of Ac-DEVD-ρNA at a concentration of 2 mM was added. | [
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PMC10055960 | In addition, the cell culture media without cells were used as a blank, and wells filled with cell culture media and the serial dilutions of each compound were used as color control; three independent measurements were performed. | [
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PMC11590005 | The campaigns were promoted in social media on relevant national and international dates for the struggle against racial discrimination. | [
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PMC10178190 | HGF is a paracrine growth factor secreted by mesenchymal cells, and it targets primarily epithelial cells , and it exerts its function via its receptor, HGFR or c-MET . | [
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PMC11588008 | After being treated with PD98059, the protein levels of p-ERK and HO-1 in PM + MSC groups tend to decrease (P < 0.05) (Figure 8). | [
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PMC6182045 | While the VRC01 antibody does not directly contact a glycan, improved binding may be partially explained by better accessibility of protein epitopes in the context of smaller glycoforms. | [
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PMC9429973 | In univariate analysis, presence of ASXL1 mutation was associated with favorable response (CR/CRi 83% vs 53%, p=0.01), secondary AML (CR/CRi 49% vs 65%, p=0.09), adverse karyotype (49% vs 67%, p=0.11), presence of TP53 (32% vs 67%, p=0.002) and FLT3-ITD mutations (30% vs 61%; p=0.06) predicted inferior response. | [
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PMC11525293 | ACE2 is a p63 transcriptional target. | [
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PMC4443654 | The scale of TAD organization (median length 880 kb) is below that of the multi-megabase chromatin domains delineating occupancy of A and B nuclear compartments . | [
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PMC11791264 | I, SETD7 OE promoted the proliferation of SKOV3 cells determined by cell counting assay. | [
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PMC10523483 | H1.2 levels in indicated NSCLC cell lines and human lung fibroblast cell line MRC5. ( | [
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PMC11746948 | Statistical analyses: two-way ANOVA with Tukey’s multiple comparisons test for (c, e–g, i); one-way ANOVA with Tukey’s multiple comparisons test for (a, b, k, l, n). | [
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PMC11240052 | Promotion of apoptosis in overexpressed Circ-0008285 ovarian cancer cells To evaluate the role of hsa_circ_0008285 in ovarian cancer cell behavior, SKOV3 and A2780 cell lines were transfected with siRNA targeting circ-0008285. | [
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PMC11541241 | In conclusion, it appears that the FKBP12‐TOR pathway is conserved in all the investigated fungi. | [
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PMC9454178 | Among the genes screened out by ChIP-seq of GIST tumour samples and cell lines, OSR1 was hypothesized to bind to the c-KIT locus by ATAC sequencing . | [
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PMC9429973 | Seventeen CXCR4 variants were identified (several outside the C-terminus of CXCR4) that caused in vitro functional defects resembling those exhibited by known WHIM variants. | [
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PMC9920575 | It has also been reported that cucurbitacins show anticancer activity , via induction of cytochrome-c release, activation of caspase-3 and caspase-9, and apoptosis through the intrinsic pathway , and there are no reports that show that they activate the death receptor of the extrinsic pathway. | [
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PMC11055510 | This unexpected function of IL1RAP confers on Ewing sarcoma cells the ability to maintain and replenish cysteine and GSH pools, even in the presence of limited extracellular cystine uptake, IL1RAP is used as a cytoprotective mechanism during the metastatic cascade. | [
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PMC11541409 | However, it provides preliminary result of targeting the hypermethylation process in SDH-deficient GIST. | [
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PMC11476666 | For treatment, medium was supplemented with different concentration of stilbenes as described. | [
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PMC8358006 | To understand the function of the putative GSD target genes, we analyzed the biological processes and pathways of the genes targeted by GSDs. | [
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PMC11629192 | Pediatric patients (under 18 years old) who were diagnosed with anti-NMDAR encephalitis according to the criteria proposed by Graus et al. and were treated with OFA as a second-line immunotherapy in the Neurology Department of Guangzhou Women and Children's Medical Center, Guangzhou Medical University, were included. | [
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9429973 | Patients were unvaccinated between March 2020 and May 2021, and partially or completely vaccinated between May 2021 and January 2022. | [
{
"tags": [
"O",
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"O",
"O",
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"O",
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"tokens": [
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... |
PMC11627133 | In contrast, small organic fluorophores have been employed for protein visualization through the use of the genetically encodable HaloTag and SNAP‐tag.[ , ] | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tok... |
PMC10588957 | For example, DATS affects tumour development by regulating cell apoptosis (17). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"For",
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"DATS",
"affects",
"tumour",
"development",
... |
PMC5535901 | The results showed that I3C and DIM pretreatment, at higher concentrations of 50 and 10 μM, respectively, significantly increased PMA/ionomycin-induced interleukin-2 (IL-2), interleukin-8 (IL-8) and tumor necrosis factor-α (TNF-α) production, measured by real time polymerase chain reaction (RT-PCR) and enzyme linked im... | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11755519 | In summary, the transfer of substances produced by tumor cells via EVs to the environment influences many stages of tumor progression such as activation of proliferative and angiogenic pathways or modulation of the immune response. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC10728200 | The synergistic effect of the combination treatment was measured using CompuSyn software (Paramus, NJ, USA). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"synergistic",
"effect",
"o... |
PMC11767817 | From an oncological perspective, curcumin offers several therapeutic benefits, and its anticancer potential can be considered from different perspectives. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"From",
"an",
"onc... |
PMC10994876 | After 24, 48, and 72 h of transfection, a colorimetric cell viability assay was performed using the MTS proliferation assay kit (Promega, USA). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11764090 | Phytohormones are signal molecules that comprehensively respond to plant abiotic stress, and their signal transduction mechanism is related to the plant’s response to cold stress. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11681005 | Loci were K‐means clustered according to their epigenetic modification profiles into 10 clusters. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Loci",
"were",
"K‐means",
"clustered",
"according",
"to",
"their",
"epigene... |
PMC9454852 | In fact, there is no efficient therapeutic treatment for malignant pleural mesothelioma (MPM). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"In",
"fact",
",",
"there",
"is",
"no",
"efficien... |
PMC10213199 | Key upregulated genes in the low-conc. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Key",
"upregulated",
"genes",
"in",
"the",
"low-conc",
"."
]
}
] |
PMC10565698 | Circular RNAs (circRNAs) contribute to the pathogenesis of different cancers, but their role in LC is not entirely understood. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Circular",
"... |
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