sha256 stringlengths 64 64 | language stringclasses 27
values | size int32 1 491k | lines int32 1 21.8k | content stringlengths 1 200k |
|---|---|---|---|---|
aa69b1f1972fee34ed4380223a452073394fa589a07cadee4fa3cb5ea1f45f4c | C/C++ | 1,444 | 51 | /***************************************************************************
*
* Author: "Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... |
ace153743ea286603c7f3371ff31cb49ef83ca9d1ec36ae600af0d5f6ceb1a3b | C/C++ | 1,450 | 47 | //********************************************************************************************************************
// Processor.h
//********************************************************************************************************************
#include "FileDataBucket.h"
#include "GeneralOperations.h"
const ... |
221719c9cc7fbc82b3062968c508ff94335b53c22d5f3db668caa85cdcd020fd | C/C++ | 1,454 | 42 | /*
* Copyright (c) Facebook, Inc. and its affiliates.
* All rights reserved.
*
* This source code is licensed under the BSD-style license found in the
* LICENSE file in the root directory of this source tree.
*/
#pragma once
#include <stddef.h>
#include <stdint.h>
#include <qnnpack/common.h>
#include <qnnpack/... |
fdbfa46e66253ef86f5226fab53e35e63ae9c7958b68ec2b40fce306befa621e | C/C++ | 1,454 | 57 | #pragma once
#include <ATen/core/Generator.h>
#include <ATen/detail/AcceleratorHooksInterface.h>
#include <c10/core/Allocator.h>
#include <c10/core/Device.h>
#include <c10/util/Registry.h>
namespace at {
struct TORCH_API HPUHooksInterface : AcceleratorHooksInterface {
~HPUHooksInterface() override = default;
v... |
de7c538add64122944e5f5c3a491289b04964b14f7d61473918ffac42a6db1d2 | C/C++ | 1,457 | 62 | /***************************************************************************
*
* Author: "Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... |
990ed26d375b986f01bd6071176ba44f92e3eac9c19e48ec983e3a03621d6041 | C/C++ | 1,459 | 43 | //********************************************************************************************************************
// Processor.h
//********************************************************************************************************************
#include "FileDataBucket.h"
#include "GeneralOperations.h"
c... |
98294279dae51d2e2c6fc5724ea2455c4b18acfb4afa2226c093589ac28ed20f | C/C++ | 1,461 | 46 | #pragma once
#include <ATen/native/DispatchStub.h>
#include <ATen/OpMathType.h>
#include <ATen/TensorIterator.h>
#include <c10/core/Scalar.h>
namespace at::native {
template <typename scalar_t>
C10_HOST_DEVICE C10_ALWAYS_INLINE bool is_lerp_weight_small(scalar_t weight) {
return std::abs(weight) < scalar_t(0.5);
}... |
a71a4d836c61d7032da96b115ec66a09812745a5f919fbe38cc0601c6ebac1bf | C/C++ | 1,462 | 49 | /***************************************************************************
*
* Author: "Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... |
ee8bae9e090e9269df56a5a91bd7552626c8f177e7c174701de963f06534c48c | C/C++ | 1,467 | 52 | /***************************************************************************
*
* Author: "Jasenko Zivanov & Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* t... |
49351c6fbf2b9172176c7af330db65e8278ee68c0ef7b383258df481cae87811 | C/C++ | 1,468 | 42 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
a47aabb20f98b6f016136d663ad487d25078ace7fc26938a83153674fe743642 | C/C++ | 1,469 | 63 | #ifndef MPSCNNTests_h
#define MPSCNNTests_h
bool test_synchronization();
bool test_copy_nchw_to_metal();
bool test_conv2d();
bool test_depthwiseConv();
bool test_max_pool2d();
bool test_max_pool2d_ceil();
bool test_max_pool2d_padding();
bool test_relu();
bool test_addmm();
bool test_add();
bool test_add_broadcast();
b... |
8ef6026afe38cc305a6b059a88184ef0be8a661a6a0fc22efaaf2357e321b8e4 | C/C++ | 1,485 | 58 | // Original TunableOp is from onnxruntime.
// https://github.com/microsoft/onnxruntime/blob/main/onnxruntime/core/framework/tunable.h
// https://github.com/microsoft/onnxruntime/tree/main/onnxruntime/core/providers/cuda/tunable
// Copyright (c) Microsoft Corporation.
// Licensed under the MIT license.
//
// Adapting Tu... |
9508e489c852fb48545bc5d36ceb934e4b81853d9456e3d1585bb51036e3ebd0 | C/C++ | 1,488 | 39 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
9227c5ed2a91261b3a5c1685e385d70ec3d37affc8bdedd26bedd0fd65ad6c66 | C/C++ | 1,492 | 50 | /***************************************************************************
*
* Author: "Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... |
85d88b02f2896e04a68afb779d67327e7b52e28d4fbd4e098baa12759a0de59d | C/C++ | 1,493 | 45 | #pragma once
#include <c10/macros/Export.h>
#include <c10/core/ScalarType.h>
namespace at::native {
// Quantize a float value into a uint value given scale and zero_point
template <typename T>
TORCH_API T quantize_val(double scale, int64_t zero_point, float value);
// TODO combine this with quantize_val once the nume... |
0785583937907607bb496ccead753891eef06923c3a7f934dc1268bd9f0d77a4 | C/C++ | 1,496 | 43 | #pragma once
#include <c10/core/SafePyObject.h>
#include <c10/macros/Macros.h>
namespace at::impl {
enum TorchFunctionDisabledState { ENABLED, SUBCLASSES_DISABLED, ALL_DISABLED };
struct TORCH_API PythonTorchFunctionTLS {
static void set_disabled_state(TorchFunctionDisabledState disabled_state_);
static TorchFu... |
63c08082ffc7cd6a9727ec2fd1c09d60422a969b931265ff397427c80b573dc2 | C/C++ | 1,497 | 47 | //********************************************************************************************************************
// Processor.h
//********************************************************************************************************************
#include "FileDataBucket.h"
#include "GeneralOperations.h"
... |
5fc7c5a05c3f2c0c2ceff1f0e64d403e54afbeed376a1059846610fd0a5fbe2f | C/C++ | 1,506 | 38 | #pragma once
#include <c10/macros/Macros.h>
#include <string>
#define JITERATOR_HOST_DEVICE C10_HOST_DEVICE
#if defined(_MSC_VER) && defined(__CUDACC__)
// NVRTC on Windows errors if __host__ __device__ attribute is
// present on kernel.
// error: attribute "__host__" does not apply here
// error: attribute "__device_... |
2e8d1cca6dd483cb75d3c73964ff4412f4d8173291b6a2123abe480dadaf77fd | C/C++ | 1,518 | 56 | #pragma once
#include <ATen/native/DispatchStub.h>
namespace c10 {
class Scalar;
}
namespace at {
class Tensor;
struct TensorIterator;
struct TensorIteratorBase;
} // namespace at
namespace at::native {
using reduce_minmax_fn =
void (*)(Tensor&, Tensor&, const Tensor&, int64_t, bool);
using structured_reduce_m... |
d68be6c8fb439279c90ff7587fb438242d0e75f839baea189a9f05e2ba57b14b | C/C++ | 1,523 | 49 | /***************************************************************************
*
* Author: "Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... |
ee876b3442205dff8dec0409984f1db1882b34abdd89a4da5b791740520c890a | C/C++ | 1,527 | 49 | #pragma once
#include <ATen/core/Generator.h>
#include <ATen/core/MT19937RNGEngine.h>
#include <c10/core/GeneratorImpl.h>
#include <optional>
namespace at {
struct TORCH_API CPUGeneratorImpl : public c10::GeneratorImpl {
// Constructors
CPUGeneratorImpl(uint64_t seed_in = default_rng_seed_val);
~CPUGeneratorIm... |
c4d23af4847d296ac10e5ce9e6ef1c388944b9cc619383f845e6c0fdd4ee1494 | C/C++ | 1,532 | 34 | /*
* Copyright (C) 1993 Bernd Feige
* This file is part of avg_q and released under the GPL v3 (see avg_q/COPYING).
*/
/*
* optimize.h defines memory structures that should be able to contain
* whatever is necessary to optimize (find zeros, min values...) an
* n-dimensional function without interfering with possi... |
b23d1650a0ab7e367705298784ccf55d10af25f443e9c8ab442c2919533c6339 | C/C++ | 1,535 | 37 | #pragma once
#include <limits>
#include <c10/util/Exception.h>
namespace at::cuda::detail {
// CUDA: grid stride looping
//
// int64_t _i_n_d_e_x specifically prevents overflow in the loop increment.
// If input.numel() < INT_MAX, _i_n_d_e_x < INT_MAX, except after the final
// iteration of the loop where _i_n_d_e_x... |
8282770d71926334551c5d89cf4046b9f87e953ea1359d4ce2d4f4839895d129 | C/C++ | 1,549 | 68 | /*
* Copyright (c) Facebook, Inc. and its affiliates.
* All rights reserved.
*
* This source code is licensed under the BSD-style license found in the
* LICENSE file in the root directory of this source tree.
*/
#pragma once
#include <algorithm>
#include <cassert>
#include <cstddef>
#include <cstdlib>
#include ... |
14f9ddec4b3ede2e9d9bed4112c53610b50cdf10b654374c230a2847bc7d843b | C/C++ | 1,551 | 48 | //******************************************************************************************************************************************************
// Processor.h
// Author: Kevin Iamiceli
// Modified March 9, 2003
// Version 3.00
//**********************************************************************************... |
b12664f15967ad54097d6a77650f71a357b40eb8b857ffa5b2b5ca8c288747a5 | C/C++ | 1,555 | 37 | // This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
// This program is distributed in the hope that it will be use... |
d5fc15f81da296f685c4f979f9e840dce30c553cb3fe74c12c6c508eccff2fe7 | C/C++ | 1,557 | 54 | #pragma once
#include <ATen/Config.h>
#include <ATen/Tensor.h>
#include <ATen/core/List.h>
#if AT_MKLDNN_ENABLED()
namespace at::native::xpu {
C10_API Tensor convolution_pointwise(
const Tensor& input_t,
const Tensor& weight_t,
const std::optional<Tensor>& bias_opt,
IntArrayRef padding,
IntArrayR... |
fb6f6324b3863b241bde8100f530b954426283e20d060262600a21d46a54597d | C/C++ | 1,560 | 38 | #pragma once
#include <ATen/functorch/Interpreter.h>
namespace at::functorch {
// These are the interpreters for our AD transforms
// (grad, vjp and jvp).
// See NOTE: [functorch interpreter stack] for more details.
struct TORCH_API GradInterpreterPtr {
explicit GradInterpreterPtr(const Interpreter* base): base_(b... |
441469c2b1525f607f0faebea18788fbaa0c8c2d650f78c30985e69942c3d4b1 | C/C++ | 1,562 | 61 | // Copyright © 2022 Apple Inc.
#pragma once
#include <ATen/core/Generator.h>
#include <ATen/core/PhiloxRNGEngine.h>
#include <c10/core/GeneratorImpl.h>
#include <optional>
namespace at {
namespace mps::detail {
constexpr uint32_t PHILOX_STATE_N = 7;
struct rng_data_pod {
std::array<uint32_t, PHILOX_STATE_N> stat... |
43084be3fb89dcd9da4ef5dca010e96be5c2c277aff48558cc6177c96936478f | C/C++ | 1,569 | 54 | #ifndef RELION_H_
#define RELION_H_
//This is a main header - it includes everything else.
#include <external/Healpix_2.15a/arr.h>
#include <external/Healpix_2.15a/cxxutils.h>
#include <external/Healpix_2.15a/datatypes.h>
#include <external/Healpix_2.15a/geom_utils.h>
#include <external/Healpix_2.15a/healpix_base.h>
... |
4468345acf2b3c53b5af43921ec887e40e44178ed9c288dadd91e6206c0f181d | C/C++ | 1,573 | 57 | //********************************************************************************************************************
// Nlx2MatSpikeInclude.h
//********************************************************************************************************************
//#include "mex.h"
//#include <afx.h>
//#include <vector>... |
1458c00aeac3362cc94147d76ce1de35d0afed56e9a8f1a577ea27fb95398808 | C/C++ | 1,577 | 52 | #ifndef LEGACY_OBS_MODEL_H
#define LEGACY_OBS_MODEL_H
#include <src/image.h>
#include <src/fftw.h>
#include <src/complex.h>
#include <src/metadata_table.h>
#include <src/projector.h>
class BackProjector;
class LegacyObservationModel
{
public:
LegacyObservationModel();
LegacyObservationModel(doub... |
d65759b56d6f7a4329d13cdb560f003cefe7ef73c054ecc1428e8e8ca6f4a1cd | C/C++ | 1,584 | 53 | /***************************************************************************
*
* Author: "Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... |
eed7f28f11c357eaf509773248ff28545eb66c35dac50c9b3b4390026322a7f7 | C/C++ | 1,587 | 62 | #ifndef TILE_CTF_COST_H
#define TILE_CTF_COST_H
#include <src/jaz/image/buffered_image.h>
#include "spectral_ctf_cost.h"
class TileCtfCost : public DifferentiableOptimization
{
public:
/*typedef enum
{
PerFrame = 0,
PerTile = 1
}
Mode;
typedef enum
{
Defocus = 0,
Astigmati... |
0bb2db863d322a64978b2b3b588363a8a2e4595947f316b7a1440635127e541e | C/C++ | 1,595 | 75 | /*
* Copyright (c) Meta Platforms, Inc. and affiliates.
* All rights reserved.
*
* This source code is licensed under the BSD-style license found in the
* LICENSE file in the root directory of this source tree.
*/
// work around CK assuming only a single FP8 interpretation at a time
#if defined(__gfx942__) && __... |
2c08b8ecf6e924652fa12dd339b340cc0de6ce429b442b3c980d175ae4cf2413 | C/C++ | 1,595 | 53 | #pragma once
#include <ATen/Tensor.h>
#include <c10/core/Scalar.h>
#ifndef AT_PER_OPERATOR_HEADERS
#include <ATen/Functions.h>
#else
#include <ATen/ops/scalar_tensor.h>
#endif
namespace at::detail {
// When filling a number to 1-element CPU tensor, we want to skip
// everything but manipulate data ptr directly.
// I... |
486788aeb0870df6fc1c4268fddf65af9e849edce73d05996436603f88889194 | C/C++ | 1,599 | 48 | //******************************************************************************************************************************************************
// Processor.h
// Author: Kevin Iamiceli
// Modified March 9, 2003
// Version 3.00
//*****************************************************************************... |
dd180012e85ccd751a54bd57dd481b33162231f237fc1a93a4d17be3d90184c7 | C/C++ | 1,607 | 50 | #ifndef BP_KERNELS_H_
#define BP_KERNELS_H_
#include "src/acc/acc_backprojector.h"
namespace syclKernels
{
template <bool CTF_PREMULTIPLIED, bool SGD>
#ifndef __INTEL_COMPILER
__attribute__((always_inline))
#endif
inline
void backproject2D(
unsigned long imageCount, int block_size,
AccProjectorKernel &projector,... |
20e1859f25bc05064195751f9d5762bf5f4ea5decafbede6537532c6e9631f2a | C/C++ | 1,617 | 67 | #ifndef COLOR_HELPER_H
#define COLOR_HELPER_H
#include <src/jaz/gravis/tRGB.h>
#include <src/image.h>
#include "raw_image.h"
class ColorHelper
{
public:
static gravis::dRGB signedToRedBlue(double d, double scale = 1.0, double rbFract = 0.333);
static void writeAngleToPNG(const Image<RFLOAT>& img, std::stri... |
488087cd0c41a84fb62b01eb7fdcfa3447a5ce9198d8700751d36f67f102864c | C/C++ | 1,619 | 46 | // This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
// This program is distributed in the hope that it will be useful,
... |
c830d87eb01f295f012ff08c7b5626384339970401f6e1c2a82e61cd80a5f792 | C/C++ | 1,630 | 57 | //********************************************************************************************************************
// Nlx2MatSpikeInclude.h
//********************************************************************************************************************
//#include "mex.h"
//#include <afx.h>
//#include <ve... |
ef8a80b6a5feb2c9920b8574cde521dd611c456bba29f15db33261d61231ebf0 | C/C++ | 1,631 | 58 | //********************************************************************************************************************
// Nlx2MatSpikeInclude.h
//********************************************************************************************************************
#include "mex.h"
#include <vector>
#include "Nlx_Error.h... |
9eb78cc3bf7466c7f259ef274721da18f738ea2bb66b786d2c4df8e9b806f7d6 | C/C++ | 1,641 | 49 | #pragma once
#include <ATen/miopen/miopen-wrapper.h>
#include <string>
#include <stdexcept>
#include <sstream>
namespace at { namespace native {
class miopen_exception : public std::runtime_error {
public:
miopenStatus_t status;
miopen_exception(miopenStatus_t status, const char* msg)
: std::runtime_error(... |
0508b6acb26eb7aab7a5a77700715233ff0b14c21fc0964e9bd285cfac4808fd | C/C++ | 1,649 | 69 | #pragma once
#include <ATen/native/DispatchStub.h>
namespace c10 {
class Scalar;
}
namespace at {
struct TensorIterator;
struct TensorIteratorBase;
namespace native {
#if defined(__CUDACC__) || defined(__HIPCC__)
#define HOST_DEVICE __host__ __device__
#else
#define HOST_DEVICE
#endif
// integral power in pytorc... |
0eb83b268743acd109dc61aacd256b0be20b7acd28879ca9fe3380d966c374f6 | C/C++ | 1,650 | 52 | #pragma once
#include <ATen/core/Tensor.h>
#include <ATen/TensorOperators.h>
#ifndef AT_PER_OPERATOR_HEADERS
#include <ATen/Functions.h>
#else
#include <ATen/ops/empty.h>
#include <ATen/ops/empty_like.h>
#endif
namespace at::native {
template <
typename index_t,
void compute(const index_t*, const int64_t*, ... |
eac742626497d09602aaafbc9fd8df367b773e40c39821a416263afea43ce7dd | C/C++ | 1,650 | 91 | #ifndef IMG_CUTTING_H
#define IMG_CUTTING_H
#include "buffered_image.h"
class Cutting
{
public:
template <class T>
static void extract2D(
const RawImage<T>& src,
BufferedImage<T>& dest,
long int x0, long int y0,
long int w, long int h);
template <class T>
static BufferedImage<T> extra... |
f991e2a6f74787286176fbf929ec2bfaf7293f0e6e810c1a6c3229655bd2ea04 | C/C++ | 1,652 | 86 | // Original TunableOp is from onnxruntime.
// https://github.com/microsoft/onnxruntime/blob/main/onnxruntime/core/framework/tunable.h
// Copyright (c) Microsoft Corporation.
// Licensed under the MIT license.
//
// Adapting TunableOp into PyTorch
// Copyright (c) Advanced Micro Devices, Inc.
//
#pragma once
#include <... |
f22d20bb9dc18aadb77363d2431bec66b6f8a2b0dc162dbf1553ec4c341e9f9b | C/C++ | 1,656 | 42 | #pragma once
#include <ATen/core/operator_name.h>
#include <c10/macros/Export.h>
namespace at::impl {
// C++-side copy of the Python decomp/meta/prims/op_impl registries
// these are updated at Python registration sites
//
// The tables are kept in sync by hooks at the Python registration sites, which
// call fakeDi... |
163da2c128eb1566f0913c7c53330be56d8ffa95a37e6aeb7e1bcc65f1a6e762 | C/C++ | 1,658 | 46 | #pragma once
#include <c10/metal/common.h>
#ifndef __METAL_VERSION__
#include <ATen/native/UpSample.h>
#include <initializer_list>
#include <optional>
#endif
template <unsigned N = 5>
struct UpsampleParams {
::c10::metal::array<int64_t, N> input_strides;
::c10::metal::array<int64_t, N> input_sizes;
::c10::metal... |
58a7bfce67986dee113fe3cf146fb0521243789530374ef6d2aa4706ee65e2d6 | C/C++ | 1,658 | 56 | /***************************************************************************
*
* Author: "Jasenko Zivanov & Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* t... |
8f5dbe3fc4270e6b51ce315c851ec466a2ddfeb79fa7b58ab785bbcc4b54a911 | C/C++ | 1,658 | 47 | // This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
// This program is distributed in the hope that it will be use... |
4d6741e9c5f14774fb20bdae6eafb164bb0eab94eb27842a44b61dd07670ed31 | C/C++ | 1,663 | 57 | #pragma once
#include <ATen/EmptyTensor.h>
#include <ATen/native/ResizeCommon.h>
#include <c10/cuda/CUDAGuard.h>
namespace at::native {
TORCH_CUDA_CPP_API void resize_bytes_cuda(StorageImpl* storage, size_t size_bytes);
TORCH_CUDA_CPP_API void resize_bytes_cuda_with_addr(
StorageImpl* storage,
size_t size_b... |
e1419ad39a1a3721c4a82e104ee76fed9ae96e8f22015d95ce8836e7c63d7824 | C/C++ | 1,667 | 64 | #pragma once
#if defined(CPU_CAPABILITY_AVX512)
#include <ATen/cpu/vec/vec512/vec512.h>
#else
#include <ATen/cpu/vec/vec128/vec128.h>
#include <ATen/cpu/vec/vec256/vec256.h>
#endif
#if ( \
defined(CPU_CAPABILITY_AVX512) || defined(CPU_CAPABILITY_AVX2... |
395ed25d5a9ae6e071ea1fdbbc35c19ba628be49ec1faff8669e4c6ccdfd37b1 | C/C++ | 1,671 | 52 | #ifndef PYTORCH_MOBILE_METAL_DEVICE_H_
#define PYTORCH_MOBILE_METAL_DEVICE_H_
#include <c10/macros/Macros.h>
C10_DIAGNOSTIC_PUSH_AND_IGNORED_IF_DEFINED("-Wdeprecated-declarations")
#import <Metal/Metal.h>
C10_DIAGNOSTIC_POP()
#include <string>
namespace at::native::metal {
struct MetalDeviceInfo {
std::string na... |
fbf777360fe791f6b8edd1a1f88e49602cc9d2e853e86374d1e27d17a8d2705d | C/C++ | 1,681 | 47 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
46a726a2739d2ce575d11cec39614f60dcc59228deba34be388be5c4093ea936 | C/C++ | 1,682 | 51 | #pragma once
#include <ATen/Tensor.h>
#include <ATen/Config.h>
namespace at::native {
class QLinearOnednn final {
public:
TORCH_API static Tensor run_pointwise_tensor(
Tensor act, // int8 CPU tensor, not QTensor
Tensor act_scale,
Tensor act_zero_point,
Tensor onednn_weight, // int8 tensor f... |
56bfda86345b8707066de467850c2e7e0b07dc2a0cdefb796d0046dd1c385dbb | C/C++ | 1,686 | 48 | /*
* Copyright (c) Facebook, Inc. and its affiliates.
* All rights reserved.
*
* This source code is licensed under the BSD-style license found in the
* LICENSE file in the root directory of this source tree.
*/
#pragma once
#include <stddef.h>
#include <stdint.h>
#include <qnnpack/common.h>
#include <qnnpack/... |
d351f4f3d3cd4352df6f541e8f3d0bf493edb001c631785b9b4a19b718fe1287 | C/C++ | 1,689 | 58 | //********************************************************************************************************************
// Nlx2MatSpikeInclude.h
//********************************************************************************************************************
#include "mex.h"
#include <vector>
#include "Nlx_E... |
58ebd88ec68b858f9bec6f5a26969b21065f3c4537ce003ec37a5043f1df6ab8 | C/C++ | 1,691 | 59 | #ifndef LOCAL_PARTICLE_REFINEMENT_H
#define LOCAL_PARTICLE_REFINEMENT_H
#include <src/jaz/optimization/optimization.h>
#include <src/jaz/tomography/particle_set.h>
#include <src/jaz/tomography/tomogram.h>
#include <src/jaz/tomography/reference_map.h>
#include <src/jaz/optics/aberrations_cache.h>
class LocalParticleR... |
038711093aea40b9d086f8674178d82589b7464a0565cfd7d2b1d69277f0e1fb | C/C++ | 1,703 | 41 | #pragma once
#include <ATen/native/DispatchStub.h>
#include <c10/util/ArrayRef.h>
namespace at {
class Tensor;
class TensorBase;
struct TensorIterator;
struct TensorIteratorBase;
}
namespace c10 {
class Scalar;
}
namespace at::native {
using index_fn = void(*)(TensorIteratorBase &, IntArrayRef indexed_sizes, IntArr... |
c7b93372cd8cfbc7538d73b2fd351034b000213ec0093affda1b8fb9b2deb88b | C/C++ | 1,717 | 49 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
1400d26f599b9c1f2dbe642cbc4b9208ea47b76df6bd3ea401152cc8dc89185f | C/C++ | 1,719 | 49 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
321773781f78eb0d937f4f968ee8bcdfddbc9be305067f1d56acbda4054006ff | C/C++ | 1,726 | 69 | #pragma once
#include <ATen/cpu/vec/intrinsics.h>
#include <ATen/cpu/vec/vec_base.h>
#include <ATen/cpu/vec/vec_mask.h>
namespace at::vec {
inline namespace CPU_CAPABILITY {
#if defined(CPU_CAPABILITY_VSX)
template <int N>
struct VecMaskCast<int, N, float, N> {
static inline VecMask<int, N> apply(const VecMask<fl... |
1239c45a7268b4dcdf5b2ac53090455c4c6ce1f8111d7158f1da5877f7472ccd | C/C++ | 1,730 | 51 | #pragma once
#include <ATen/core/Tensor.h>
#include <ATen/native/TensorFactories.h>
#include <c10/util/irange.h>
#ifndef AT_PER_OPERATOR_HEADERS
#include <ATen/NativeFunctions.h>
#else
#include <ATen/ops/empty.h>
#endif
namespace at::native {
template <typename T>
inline T storage_size_for(ArrayRef<T> size, ArrayRe... |
616cf93664f0746b4d681987ac6420b5f67643b5566356c76c53ca31bc13b23b | C/C++ | 1,733 | 49 | /*
* Copyright (C) 1996-2000,2003,2007,2013,2022 Bernd Feige
* This file is part of avg_q and released under the GPL v3 (see avg_q/COPYING).
*/
#ifndef _GROWING_BUF_H
#define _GROWING_BUF_H
#ifndef Bool
#define Bool int
#endif
#ifndef TRUE
#define TRUE 1
#endif
#ifndef FALSE
#define FALSE 0
#endif
typedef struct {... |
6c3f9f9a5cfbfd0237d6128d4df441eaa1648b3f5ce5d5232467e0bc927cd4c8 | C/C++ | 1,736 | 79 | #ifndef NO_DEFORMATION_MODEL_H
#define NO_DEFORMATION_MODEL_H
#include <src/jaz/gravis/t2Vector.h>
class No2DDeformationModel
{
public:
inline int getParameterCount() const;
inline void computeShiftAndGradient(
const gravis::d2Vector& pl,
const double* parameters,
gravis::d2Vector& def,
gravi... |
faaabe548d41c15f6657273da7e98de7834549dc0541e35c8e72450626511db4 | C/C++ | 1,737 | 48 | /*
* Copyright (c) Facebook, Inc. and its affiliates.
* All rights reserved.
*
* This source code is licensed under the BSD-style license found in the
* LICENSE file in the root directory of this source tree.
*/
#pragma once
#include <limits.h>
#include <stdint.h>
/*
* The code below is adapted from Google's ... |
f7f8fdeb61d025ba565617ea9db70f9980f73d8915e31625cf69d51853ae4a75 | C/C++ | 1,742 | 47 | // This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
// This program is distributed in the hope that it will be use... |
ea7610a5d4e62cf651e5e0628ba4ed76b38027148dae96f5cb38b2d4b913b8b6 | C/C++ | 1,745 | 69 | /******************************************************************************
** Title: Raw array in and output
** Description: Input/Output for tArrays.
**
** Author: Brian Amberg, 2006
** Computer Science Department, University Basel (CH)
**
***************************************... |
1c2720891e0e481a7d63263351b31afaee67e9ffcd0cb9f009b07fbaeadc3173 | C/C++ | 1,748 | 60 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
4f2c9c411c3c2df9fd0ff91abc2e66288a1ee0466c67fea6d7ddef4c7ff07a02 | C/C++ | 1,753 | 72 | #ifndef FILAMENT_H
#define FILAMENT_H
#include <src/jaz/math/spline.h>
#include <src/jaz/gravis/t3Vector.h>
#include <src/jaz/gravis/t4Matrix.h>
#include <src/jaz/image/buffered_image.h>
#include <map>
#include <vector>
#include "filament_mapping.h"
class Filament
{
public:
static void computeArcLength(
... |
3c43fa19331ecda1e62bc58d3ac7738744d64f74f22307bbbe9bc9933e04fec1 | C/C++ | 1,756 | 57 |
c
c valuator values
c
integer MOUSEX, MOUSEY
parameter(MOUSEX = 1, MOUSEY = 2)
c
c keyboard and mouse buttons
c
integer AKEY, BKEY, CKEY, DKEY, EKEY, FKEY, GKEY, HKEY
integer IKEY, JKEY, KKEY, LKEY, MKEY, NKEY, OKEY, PKEY
integer QKEY, RKEY, SKEY, TKEY, UKEY, VKEY, WKEY, XKEY
integer YKEY, ZKEY
integer ZEROKE... |
d0681b1b10191536275c593ba0d555b6e739e94c48f6fb092f8a92f60331c6bc | C/C++ | 1,761 | 48 | // This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
// This program is distributed in the hope that it will be use... |
7d9b1660dac4c17d2fdd7fd00d434c2f09e70e58b45f0fada99e333f179735d0 | C/C++ | 1,764 | 104 | /*
* devices
*/
#ifndef VOGL
#define VOGL
#endif
/*
* valuator values
*/
#define MOUSEX 1
#define MOUSEY 2
/*
* keyboard
*/
#define AKEY 'A'
#define BKEY 'B'
#define CKEY 'C'
#define DKEY 'D'
#define EKEY 'E'
#define FKEY 'F'
#define GKEY 'G'
#define HKEY 'H'
#define IKEY 'I'
#define JKEY 'J'
#defi... |
e91756071e147717cf71233cde20ca3693070858bfeaa58c4b955975c1a13a31 | C/C++ | 1,764 | 49 | /***************************************************************************
*
* Author: "Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... |
b9831b28f397eb6f0007f5822660699169caf41b15fc70ca0e344d0e04f23049 | C/C++ | 1,766 | 54 | /* FILE graph.h */
/* Variables used for graphing. See also _tek library */
#include "defs.h"
#include "_plot/plot.h"
/* ******************************************************************** */
int Set_LineType(int type);
void GraphPrintf(char *format, ...);
int Get_x_offset(void);
void Set_x_offset(int x);
flo... |
068e92690194247cded582c6160a9f55b081d08b666ab1e7985dfabe60b8ecfa | C/C++ | 1,776 | 79 | #pragma once
#include <c10/core/ScalarType.h>
#include <c10/util/BFloat16.h>
#include <c10/util/Exception.h>
#include <c10/util/Float8_e4m3fn.h>
#include <c10/util/Float8_e4m3fnuz.h>
#include <c10/util/Float8_e5m2.h>
#include <c10/util/Float8_e5m2fnuz.h>
#include <c10/util/Half.h>
#include <torch/headeronly/core/Dispa... |
2882f63ac619127d39d24ca19eee5fefa1e55a066ff790a0a8c82f98c741d8ef | C/C++ | 1,781 | 64 | #pragma once
#include <ATen/core/GraphImplInterface.h>
namespace at::accelerator {
struct TORCH_API Graph {
Graph(bool keep_graph = false);
~Graph() = default;
C10_DISABLE_COPY_AND_ASSIGN(Graph);
// Begin graph capture on the current device and stream. Different accelerator
// backends may support differe... |
3cbf51a83854694cec64c6d4eb833923668f99a5841268bf11836aa61ec5c607 | C/C++ | 1,787 | 67 | #pragma once
#include <ATen/core/Tensor.h>
#include <ATen/Dispatch.h>
#include <ATen/native/DispatchStub.h>
namespace at {
struct TensorIterator;
namespace native {
using fake_quant_tensor_cachemask_fn = void (*)(
Tensor& output,
Tensor& mask,
const Tensor& input,
float sc,
int64_t z_point,
... |
19b351784170a76d0d7278cfff0c90b781ab0df598281ffea37a5b36bcf12cc5 | C/C++ | 1,792 | 63 | #ifndef SPIKE_COLLECTOR_H
#define SPIKE_COLLECTOR_H
#include <vector>
#include <string>
#include <thread>
#include <atomic>
#include <zmq.hpp>
#include <sys/socket.h>
#include <sys/un.h>
#include <poll.h>
#include <iostream>
#include <cstring>
#include <unistd.h>
#include <fcntl.h>
#include <chrono>
#include <thread>
... |
46eba24512835bef1ad76671253720239e4c9124767e0497ab00e6e0e095bdda | C/C++ | 1,807 | 52 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
e339970b63fef8770acac68b0bcd8e28703128bc054dee333b97c569bfb0f0ed | C/C++ | 1,810 | 52 | #pragma once
#include <ATen/detail/FunctionTraits.h>
#include <ATen/native/TensorIterator.h>
#include <c10/core/ScalarType.h>
#include <complex>
#include <type_traits>
// This file includes utilities for dynamic_casting done by TensorIterator, see
// CUDALoops.cuh and Loops.h.
// dynamic_casting handles when the typ... |
d9c427bb4ff91db9806b302cd168b8b3b18ccf0712176e7abe0d3aa636422f74 | C/C++ | 1,814 | 58 | #pragma once
#include <ATen/FunctionalStorageImpl.h>
namespace at::functionalization {
// `ViewMeta` implementation for `resize_` operation.
struct TORCH_API resize__ViewMeta : public ViewMeta {
FUNCTIONALIZATION_VIEWMETA_NAME(resize__ViewMeta)
FUNCTIONALIZATION_VIEWMETA_SERIALIZABLE_TUPLE(
bool /* reapply... |
d5187f4a5d2bd1438ca70cdc97afcfd461095c1800b481ab6bac44e6dfc1ebda | C/C++ | 1,816 | 46 | #pragma once
#include <c10/macros/Macros.h>
#include <memory>
namespace at::functorch {
// NOTE [functorch TLS in pytorch/pytorch]
//
// functorch lives out-of-tree. However, it has some TLS that needs to be
// propagated. The solution for that is we store a pointer to the TLS
// inside pytorch/pytorch and extend Fu... |
68d692f85ffcc0d3fb842341540e03f2ff7906678820bb2bd4d1644cf143baf4 | C/C++ | 1,827 | 43 | /*
* Copyright (C) 1993,1994 Bernd Feige
* This file is part of avg_q and released under the GPL v3 (see avg_q/COPYING).
*/
#ifndef _BIOMAG_H
#define _BIOMAG_H
#include <transform.h>
#include <array.h>
#include <optimize.h>
#define SENSOR_CURVATURE 12.0 /* Curvature of sensor array in cm; used only as starting valu... |
b8da8cea8ffac6fdf1f0463de36c1688f1d20c795d18474ea7f3aac3db0cfda7 | C/C++ | 1,827 | 67 | #pragma once
#include <ATen/core/Tensor.h>
#include <c10/util/irange.h>
namespace at::native {
// input tensors are non-zero dim and non-empty
template <typename T1, typename T2, typename Function>
void tensor_dim_apply3(
const Tensor& self,
Tensor& values,
Tensor& indices,
int64_t dim,
Function f... |
731cd9051ba3b6a9fc32a53ca07b71a95bbd67de2dafd8cb0f77fc61094850db | C/C++ | 1,835 | 55 | /// This file contains some tensor-agnostic operations to be used in the
/// core functions of the `SobolEngine`
#include <ATen/core/Tensor.h>
#ifndef AT_PER_OPERATOR_HEADERS
#include <ATen/Functions.h>
#else
#include <ATen/ops/arange.h>
#include <ATen/ops/mul.h>
#include <ATen/ops/pow.h>
#endif
namespace at::native:... |
689302574d49b570cb22ba5f0879c1e34e07fbeb3c29ca4e44c4f52a06acfebc | C/C++ | 1,837 | 58 | /************************************************************************************************
**
** Copyright (c) 1994-1997 Axon Instruments.
** All rights reserved.
**
*************************************************************************************************
** HEADER: ADCDAC.H
** PURPOSE: Con... |
0b858ec05e3b6c11a7063aa0078e8839227f86a296c89e74f72dbeb4e6a47ea4 | C/C++ | 1,845 | 92 | #ifndef TOMO_REFERENCE_MAP_H
#define TOMO_REFERENCE_MAP_H
#include <src/jaz/image/buffered_image.h>
#include <vector>
class OptimisationSet;
class TomoReferenceMap
{
public:
static void presharpen(BufferedImage<float>& map_RS, double padding);
TomoReferenceMap();
void read(IOParser& parser);
void read... |
954394bc20a7b15c0e1387087a4edd4234b4577dce285d6e7fa804a05d4be6af | C/C++ | 1,850 | 55 | /* Autogenerated v4-0-0 from https://github.com/scottprahl/iad */
double Gain(int sphere, struct measure_type m, double uru_sample, double uru_third);
double Gain_11(struct measure_type m, double URU, double URU_t, double tdiffuse);
double Gain_22(struct measure_type m, double URU, double URU_t, double tdiffuse);
d... |
05cd6f7375f714f03fb45473037f2d72e2b73fd92078b75418409ead84e2b383 | C/C++ | 1,854 | 58 | #pragma once
#include <ATen/native/DispatchStub.h>
#include <c10/util/ArrayRef.h>
#include <optional>
namespace c10 {
class Scalar;
}
namespace at {
struct TensorIterator;
class Tensor;
}
namespace at::native {
using reduce_fn = void(*)(TensorIterator &);
DECLARE_DISPATCH(reduce_fn, sum_stub)
DECLARE_DISPATCH(red... |
b3e1f0fe5e564702ad62fb22220845d1b83e980fc28169f314539854527eab89 | C/C++ | 1,857 | 90 | #ifndef NUMPY_CORE_INCLUDE_NUMPY__NEIGHBORHOOD_IMP_H_
#error You should not include this header directly
#endif
/*
* Private API (here for inline)
*/
static inline int
_PyArrayNeighborhoodIter_IncrCoord(PyArrayNeighborhoodIterObject* iter);
/*
* Update to next item of the iterator
*
* Note: this simply increment ... |
1ade4186400ca7bd01cddffab7f82e8591362cdbca9f29049ca5a5a0de4d99f0 | C/C++ | 1,864 | 60 | #ifndef SPECTRAL_CTF_FIT_H
#define SPECTRAL_CTF_FIT_H
#include <src/jaz/optimization/optimization.h>
#include <src/jaz/image/buffered_image.h>
#include <src/ctf.h>
/*
TODO: add class SpectralTiltCtfFit that shuffles parameters to
individual SpectralCtfCost instances, allowing for:
- (k, B) and gamma per tile o... |
b4b1ef7093a85498be8dd6802987a5055acd8d11cce9fa9005aaeac67a47800e | C/C++ | 1,872 | 58 | /*
* Copyright (c) 2020-2023, NVIDIA CORPORATION. All rights reserved.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless ... |
6db831abab15f7edfb89d8bf5bafe42b7f17565408ae05ef47450dba9d5a2c35 | C/C++ | 1,880 | 49 | /////////////////////////////////////////////////////////////////////////////////
//
// Levenberg - Marquardt non-linear minimization algorithm
// Copyright (C) 2004 Manolis Lourakis (lourakis at ics forth gr)
// Institute of Computer Science, Foundation for Research & Technology - Hellas
// Heraklion, Crete, Gre... |
658223c5fbd6d6af441be20ae3ca00be55ad2c13d151c0e270d151c2fa9e4aa6 | C/C++ | 1,890 | 65 | #pragma once
#include <c10/core/Allocator.h>
#include <c10/util/Exception.h>
#include <c10/util/Registry.h>
#include <ATen/detail/AcceleratorHooksInterface.h>
// NB: Class must live in `at` due to limitations of Registry.h.
namespace at {
// The HIPHooksInterface is an omnibus interface for any HIP functionality
//... |
312b2152b86c38e8d85e890b58a614bf084f950e2e3755e6f58550dcdeb10bb4 | C/C++ | 1,892 | 69 | // This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
// This program is distributed in the hope that it will be useful,
... |
c3ad41a5c7f99152ea3f5f401a3dd7785bb9025a68ba21462b2b7b62df8b8d96 | C/C++ | 1,892 | 50 | #pragma once
#include <ATen/Config.h>
#include <ATen/native/TransposeType.h>
#include <c10/util/complex.h>
#include <c10/core/ScalarType.h>
#if !AT_MKL_ENABLED()
#define MKL_INT int
#else
#include <mkl.h>
#endif
namespace at::native {
void mkl_gemm_batched(
TransposeType trans_A, TransposeType trans_B,
MKL_I... |
6bdf31af224c15c7b2817ae14bd1900282461b5a66ff89eee9ed092c413ceeba | C/C++ | 1,894 | 97 | #ifndef SKELETONIZATION_H
#define SKELETONIZATION_H
#include <src/jaz/image/buffered_image.h>
#include <src/jaz/gravis/t3Vector.h>
#include <src/jaz/image/structure_tensor.h>
#include <src/jaz/util/zio.h>
#include <omp.h>
class Skeletonization
{
public:
typedef enum
{
Point = 0,
Curve = 1,
Surface = ... |
effa300c18e16791c6fc21bad33ff357aff8338f7e04025758d2e9c55c113fc8 | C/C++ | 1,895 | 52 | //****************************************************************************************
//
// Copyright (c) 1993-1997 Axon Instruments.
// All rights reserved.
//
//****************************************************************************************
// HEADER: COLORS.H
// PURPOSE: Contains RGB defi... |
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