sha256 stringlengths 64 64 | language stringclasses 27
values | size int32 1 491k | lines int32 1 21.8k | content stringlengths 1 200k |
|---|---|---|---|---|
f72b43b4e7d981d8cd52b12c4ec87a99f634aea1e98f4ae2b32ad0752a39bed1 | C/C++ | 1,903 | 74 | /* Portions of this code are under:
Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved.
*/
#ifndef HIP_SHORTCUTS_H_
#define HIP_SHORTCUTS_H_
namespace HipShortcuts
{
/**
* Print hip device memory info
*/
static void printMemInfo()
{
size_t free;
size_t total;
DEBUG_HANDLE_ERROR(hipMemGetInfo(... |
03598ad64b22b7b60407ff4ec0bfabb689264d104d64f9afee99f764e521c37c | C/C++ | 1,914 | 74 | /*
* mymodule.h
*
* This file is part of NEST.
*
* Copyright (C) 2004 The NEST Initiative
*
* NEST is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 2 of the License, or
* (at you... |
92d609cebb96261e6ad237d72dfd4d72783f2318ba9fd0d789edada75c93183b | C/C++ | 1,919 | 103 | #ifndef DYN_SPLINE_H
#define DYN_SPLINE_H
#include <vector>
#include <src/jaz/gravis/t4Vector.h>
template <typename T, typename S>
class Spline
{
public:
Spline();
Spline(std::vector<T> points);
std::vector<T>
coeffs_a,
coeffs_b,
coeffs_c,
coeffs_d;
T getValue(double t) const... |
8e57215b43be540248266b3cb88136fde883cd4c0a0b4e67b63cc03db183db39 | C/C++ | 1,920 | 73 |
#ifndef CUDA_BENCHMARK_UTILS_H_
#define CUDA_BENCHMARK_UTILS_H_
//Non-concurrent benchmarking tools (only for Linux)
#include <cuda_runtime.h>
#include <iostream>
#include <fstream>
#include <vector>
#include <time.h>
#include <string>
#include <sstream>
#ifdef TIMING_FILES
#define CTIC(timer,timing) (timer.cuda_cp... |
a290b92a01c4af1843aca0a32912dd2ce52c13026357847dbb7ccc56d7c6c83d | C/C++ | 1,920 | 62 | /******************************************************************************
** Title: tDeterminants.h
** Description: Templated functions for 2D, 3D and 4D determinants.
**
** Author: Michael Keller, 2005
** Computer Science Department, University Basel (CH)
**
*******************... |
b3e2145354d4c4827d7ac8aa483748a13681efdce3bc2265711101e56508e50d | C/C++ | 1,922 | 72 | #pragma once
#include <ATen/native/TensorIterator.h>
#include <c10/util/SmallBuffer.h>
#include <c10/util/irange.h>
namespace at {
struct DimCounter {
DimCounter(IntArrayRef shape, Range range);
void increment(const std::array<int64_t, 2>& step);
bool is_done() const;
std::array<int64_t, 2> max_2d_step() con... |
140cc04a6d0d7aadbb16531aa4735aaf6a74cc1fce02d46cd4e6c2994c664bf3 | C/C++ | 1,937 | 73 | #ifndef LATTICE_MOTIF_H
#define LATTICE_MOTIF_H
#include <src/jaz/gravis/t3Vector.h>
#include <src/jaz/gravis/t4Matrix.h>
#include "point_cloud.h"
#include "motif_detection.h"
class Motif
{
public:
static std::vector<std::pair<Motif, double>> discover(
const std::vector<PointCloud>& clouds,
int neig... |
33412bd34798c6277919211c2f67505723ac63d1e26d3697f41a9098945ebb83 | C/C++ | 1,943 | 73 | #ifndef PLOT_SERVER_H
#define PLOT_SERVER_H
#include "fpga_constants.h"
#include "inkube_package.h"
#include "helper_functions.h"
#include <string>
#include <vector>
#include <thread>
#include <sys/socket.h>
#include <sys/un.h>
#include <array>
#include <cstdint>
#include <cstring>
#include <iostream>
#include <stdex... |
3a5a16874b8931cfd1c8df595762148eda768eb89a0fbcab43e378e91f72b1b2 | C/C++ | 1,953 | 75 | #pragma once
#include <ATen/Config.h>
#include <string>
#include <stdexcept>
#include <sstream>
#include <cufft.h>
#include <cufftXt.h>
namespace at { namespace native {
// This means that max dim is 3 + 2 = 5 with batch dimension and possible
// complex dimension
constexpr int max_rank = 3;
static inline std::str... |
ee251bd5a1bb4c982b88f46b9fff1837f495f49f9b9cccdf53fcfa4ebb99311c | C/C++ | 1,956 | 44 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
b5549afe706ba4c1aec85dd240bb057038ae5fade0e01cbe6d704995b22e0cb6 | C/C++ | 1,957 | 48 | #include <ATen/core/Tensor.h>
#include <c10/util/Exception.h>
namespace at::native {
inline void check_pixel_shuffle_shapes(const Tensor& self, int64_t upscale_factor) {
TORCH_CHECK(self.dim() >= 3,
"pixel_shuffle expects input to have at least 3 dimensions, but got input with ",
self.di... |
4d165f5e08a96be745a695f6b8d824ae3acf962fb505f26d69d5a301e99b278b | C/C++ | 1,959 | 70 | #ifndef NUMPY_CORE_INCLUDE_NUMPY_HALFFLOAT_H_
#define NUMPY_CORE_INCLUDE_NUMPY_HALFFLOAT_H_
#include <Python.h>
#include <numpy/npy_math.h>
#ifdef __cplusplus
extern "C" {
#endif
/*
* Half-precision routines
*/
/* Conversions */
float npy_half_to_float(npy_half h);
double npy_half_to_double(npy_half h);
npy_half ... |
409569b47982b5decf7a0682a7cac45915036923e4097aadcd93cffdae23e588 | C/C++ | 1,969 | 67 | #pragma once
#include <c10/core/ScalarType.h>
#include <cstdint>
namespace at::native::mps {
enum class GemvKernel {
Standard,
T2D, // 2D lane layout, 16-byte loads; vec is implied, kq = k-sublanes
};
struct GemvConfig {
int nsimd, vec;
int kq = 4; // k-sublanes per simdgroup (gemv_t2d only)
GemvKernel k... |
4026b225d8ee9b1fdbe19312bfce3d46021fb1f182743e0531f9b66ad55971b1 | C/C++ | 1,971 | 68 | #pragma once
#include <ATen/Tensor.h>
#include <ATen/Config.h>
#if AT_MKLDNN_ENABLED()
namespace at {
namespace native {
TORCH_API Tensor mkldnn_convolution_pointwise(
const Tensor& input_t,
const Tensor& weight_t,
const std::optional<Tensor>& bias_opt,
IntArrayRef padding,
IntArrayRef stride,
... |
08283cab49479649f5be155dc5704f57d686cbec349ecbebb1bcb9ce4ae06a27 | C/C++ | 1,981 | 72 | #ifndef DUAL_CONTRAST_WRITER_H
#define DUAL_CONTRAST_WRITER_H
#include <src/jaz/image/buffered_image.h>
#include <src/jaz/image/normalization.h>
#include <src/jaz/image/cutting.h>
#include <src/jaz/image/raw_image.h>
#include <src/jaz/image/raw_image.h>
#include <src/jaz/gravis/tRGB.h>
#include <src/jaz/gravis/tImage.... |
d3fa45feb66f66879cda518389d609cd2dedfc49d67254e6b867c4f2a2f14682 | C/C++ | 1,983 | 58 | /* FILE head.h */
/* Header declaration */
struct HEADER {
char tag[8]; /* Bytes 0-7 */
char stackname[18]; /* Bytes 8-25 */
int viewing_distance; /* Bytes 26-27 */
int setup; /* Bytes 28-29 */
int touch_count2; /* Bytes 30-31 */
int stacknumber; /* Bytes 32-33 */
i... |
5f9fa828d2774bd7871b7bd275a81254234352dd57076fe7e4754aac5fa238a2 | C/C++ | 1,989 | 29 |
// This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2017 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can o... |
ca68e106b1daa6d46f23f839d4f32e96d6bec259b7f69ccc0ca7193e3046c9db | C/C++ | 1,991 | 106 | #ifndef ACC_PROJECTOR_H_
#define ACC_PROJECTOR_H_
#include "src/complex.h"
//#include "src/acc/cuda/cuda_settings.h"
//#include "src/acc/cuda/cuda_mem_utils.h"
#include "src/acc/acc_ptr.h"
//#include <cuda_runtime.h>
//#include "src/acc/cuda/cuda_kernels/cuda_device_utils.cuh"
#ifdef ALTCPU
#include <complex>
#elif _S... |
53fa66286f81ccabebe650b35eefd5ef4be901d7eb925b0d0b1cc8a92fdcd24a | C/C++ | 2,002 | 57 | #include <ATen/core/Tensor.h>
#include <ATen/native/LinearAlgebraUtils.h>
namespace at::native {
/*
* Given batches of matrices with arbitrary batch dim,
* computes the number of batches for Triu and Tril. This ignores stride 0 dimension
*/
static inline int64_t batchCountTrilTriu(const Tensor& batched_matrices) {... |
2f37a3c2ce0e2c7f35e2297fd7561af06006dd8674756d6f4c3b55b3dbdd9336 | C/C++ | 2,008 | 75 | /* Portions of this code are under:
Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved.
*/
#ifndef HIP_BENCHMARK_UTILS_H_
#define HIP_BENCHMARK_UTILS_H_
//Non-concurrent benchmarking tools (only for Linux)
#include <hip/hip_runtime.h>
#include <iostream>
#include <fstream>
#include <vector>
#inclu... |
ec3adac95984b126be7032d9b9ba5768da96b92812effd9ccd2aedd815f2fef4 | C/C++ | 2,014 | 57 | #ifndef _NR_UTILS_H_
#define _NR_UTILS_H_
#define SIGN(a,b) ((b) >= 0.0 ? fabs(a) : -fabs(a))
#if defined(__STDC__) || defined(ANSI) || defined(NRANSI)
void nrerror(char error_text[]);
double *vector(long nl, long nh);
int *ivector(long nl, long nh);
unsigned char *cvector(long nl, long nh);
unsigned long *lvector(lo... |
ff04844eea13d56510135c13c68a9e8d6186660458bc379ed0507f9baa3254a0 | C/C++ | 2,014 | 60 | /* FILE head.h */
/* Header declaration */
#define int short
struct HEADER {
char tag[8]; /* Bytes 0-7 */
char stackname[18]; /* Bytes 8-25 */
int viewing_distance; /* Bytes 26-27 */
int setup; /* Bytes 28-29 */
int touch_count2; /* Bytes 30-31 */
int stacknumber; /* B... |
fa48650eedc731e2c8c7bdd78513e1312ad342da88f8ea5b702df62e750163dd | C/C++ | 2,024 | 101 | #ifndef ACC_BACKPROJECTOR_H_
#define ACC_BACKPROJECTOR_H_
#ifdef _CUDA_ENABLED
# include <cuda_runtime.h>
using deviceStream_t = cudaStream_t;
#elif _HIP_ENABLED
# include <hip/hip_runtime.h>
using deviceStream_t = hipStream_t;
#elif _SYCL_ENABLED
# include "src/acc/sycl/sycl_virtual_dev.h"
using deviceStream_t = v... |
97f33c8cfe37e29fcdd6fc3e05dd789fd797fa1c7df297521018566ea5d7ce65 | C/C++ | 2,036 | 45 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
#ifndef EIGEN_MATH_FUNCTIO... |
c2ecc365044ff310ebdad8a85074e22f10cd0d9d5af65c2fd2fd49762ff17ff8 | C/C++ | 2,039 | 40 | #pragma once
#include <ATen/core/Tensor.h>
#include <ATen/native/DispatchStub.h>
#include <ATen/native/PoolingChecks.h>
#include <c10/util/ArrayRef.h>
#include <c10/util/irange.h>
#include <cmath>
namespace at::native {
using adaptive_avg_pooling2d_fn = void(*)(Tensor& output, const Tensor& input, IntArrayRef output... |
5077344479cdc7944fc2f0d05f313c94b9816319bf769bd60c93fb8d5cadf06d | C/C++ | 2,041 | 75 | /***************************************************************************
*
* Author: "Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... |
805f1a80947b2789675e0259f196642ac291b315fbdf06e3ae5fa0332956237f | C/C++ | 2,044 | 89 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2015 Benoit Steiner <benoit.steiner.goog@gmail.com>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You ca... |
38a9da11640f3c3bad5d57da2085919f7aa5c2d040cfc383fe5a29fd6f32c847 | C/C++ | 2,057 | 78 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
7dde1919d94d2ff74c301c70bd457973adc7dab9fbee8880a70466091487e31e | C/C++ | 2,058 | 54 | //********************************************************************************************************************
// FileDataBucket.h
//********************************************************************************************************************
//#pragma once
#include "TimeBuf.h"
const uintd MaxDataSource... |
8048b9d11055be968181910dcf335f9fc440faab8a414906744ad4e3327849da | C/C++ | 2,060 | 54 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
c27ad3170620ca85ee088c508b0b9916104956cd8869574c32fb9a370c8268ad | C/C++ | 2,071 | 78 | #pragma once
#include <ostream>
#include <sstream>
namespace c10 {
template<typename T>
inline void FunctionSchema::checkArg(
const IValue& value,
const Argument& argument,
std::optional<size_t> pos) const {
if (value.isTensor() && argument.type() == TensorType::get()) {
// Fast-path for the common ... |
1d4e752316e276e554699caec306d176183a164b99c7f657e365abaff7d61615 | C/C++ | 2,077 | 90 | #pragma once
#include <ATen/core/function.h>
#include <ATen/core/ivalue.h>
#include <c10/util/Exception.h>
#include <c10/util/intrusive_ptr.h>
#include <functional>
#include <utility>
namespace torch::jit {
struct BuiltinOpFunction : public Function {
BuiltinOpFunction(
c10::QualifiedName qualname,
c10... |
abae288f218ab21a04ec6a4e109bb4f6f0f4e7b5cf5b2ed9b5b19a3b2f208618 | C/C++ | 2,079 | 55 | /*
* Copyright (C) 1995,1996,2001,2022 Bernd Feige
* This file is part of avg_q and released under the GPL v3 (see avg_q/COPYING).
*/
/* This include file defines the data structures necessary to implement
* an architecture- and compiler-independent reading of structures into
* memory. -- Bernd Feige 6.08.199... |
e4ee7b771f832e6923f650fcf0db70532820f676016f86818c60e3f08fbca61d | C/C++ | 2,085 | 77 | #ifndef NEW_VTK_HELPER_H
#define NEW_VTK_HELPER_H
#include <src/jaz/image/buffered_image.h>
#include <src/jaz/gravis/t3Vector.h>
#include <src/jaz/math/tensor3x3.h>
class NewVtkHelper
{
public:
template <class T>
static void writeR3(const RawImage<gravis::t3Vector<T>>& img, std::string fn);
template <cla... |
33ccf7e77b7d874f55ac5d1a8443d7df7f753dbd6c00ad2ec987bf3f37e16c0a | C/C++ | 2,088 | 82 |
#ifndef CPU_BENCHMARK_UTILS_H_
#define CPU_BENCHMARK_UTILS_H_
#define CTIC(timer,timing)
#define CTOC(timer,timing)
#define GTIC(timer,timing)
#define GTOC(timer,timing)
#define GATHERGPUTIMINGS(timer)
namespace CpuKernels
{
//Non-concurrent benchmarking tools (only for Linux)
/*
//#include <cuda_runtime.h>
#inc... |
73ca08955937759e397fc7927335914401214622e9ade580d483a4357c9bb6a4 | C/C++ | 2,091 | 52 | #pragma once
#include <c10/macros/Macros.h>
C10_DIAGNOSTIC_PUSH_AND_IGNORED_IF_DEFINED("-Wdeprecated-declarations")
C10_DIAGNOSTIC_PUSH_AND_IGNORED_IF_DEFINED("-Wobjc-property-no-attribute")
#include <MetalPerformanceShadersGraph/MetalPerformanceShadersGraph.h>
C10_DIAGNOSTIC_POP()
C10_DIAGNOSTIC_POP()
#if !defined(... |
5ad5de5927c099c3bc5740a26540ac43b5a4ad58447a353604473da1f29cbf00 | C/C++ | 2,100 | 85 | #ifndef TOMO_MAG_FIT_H
#define TOMO_MAG_FIT_H
#include <src/jaz/tomography/tomogram.h>
#include <src/jaz/tomography/particle_set.h>
#include <src/jaz/tomography/reference_map.h>
#include <src/jaz/optics/magnification_helper.h>
class TomoMagFit
{
public:
TomoMagFit(
const std::vector<ParticleIndex>& particle_... |
0f1f6efaaa5b794777b339ab0542b58b2b8f407d940fbd2f367de25605c2a604 | C/C++ | 2,101 | 71 | #pragma once
#include <ATen/TensorIndexing.h>
#include <ATen/core/Tensor.h>
#include <ATen/native/IndexingUtils.h>
#include <ATen/native/TensorIterator.h>
namespace at::native {
namespace {
#ifndef STRIP_ERROR_MESSAGES
inline std::string shapes_as_str(TensorList tensors) {
std::ostringstream os;
bool first = true;... |
6d6d712fbd6adce85db3bc10577de8d63818966fe43abcc52c5452d65a12135d | C/C++ | 2,112 | 54 | //********************************************************************************************************************
// FileDataBucket.h
//********************************************************************************************************************
//#pragma once
#include "TimeBuf.h"
const uintd MaxData... |
73e73652fcf87b0a07e6a3e4aa82f4bce59733a72c24ee10797d36e886799961 | C/C++ | 2,118 | 54 | // This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
// This program is distributed in the hope that it will be use... |
8cb0d738f454c84b9910b87017748a8d1a961564d94e95b0af80957e0657a177 | C/C++ | 2,135 | 85 | #ifndef BACKPROJECT_PROGRAM_H
#define BACKPROJECT_PROGRAM_H
#include <string>
#include <src/jaz/image/buffered_image.h>
#include <src/jaz/tomography/optimisation_set.h>
class TomogramSet;
class ParticleSet;
class AberrationsCache;
class ParticleIndex;
class ReconstructParticleProgram
{
public:
ReconstructPart... |
75eafeb8c39c6bd54cc55988fe0e431b321b0618584cbb061f553bdc4b2c2b35 | C/C++ | 2,137 | 75 | #pragma once
#include <ATen/cpu/vec/intrinsics.h>
#include <ATen/cpu/vec/vec256/vsx/vsx_helpers.h>
#include <ATen/cpu/vec/vec_base.h>
#include <c10/util/irange.h>
namespace at {
namespace vec {
// See Note [CPU_CAPABILITY namespace]
inline namespace CPU_CAPABILITY {
inline std::tuple<Vectorized<float>, Vectorized<fl... |
e9562f8ec445cb95796a57d52a6032a3c71934326f217ec49b41e24693b94ba0 | C/C++ | 2,163 | 84 | #ifndef __GRAVIS__COLOUR__HSV__
#define __GRAVIS__COLOUR__HSV__
#include "../tRGBA.h"
// Author: Reinhard Knothe
// Extracted: Brian Schroeder
/**********************************************************************/
/* hsv2rgb: */
/***************************... |
183955a82a033d1bc420372eb6315b9445520abd8533d704970ecfa3f851e02a | C/C++ | 2,165 | 87 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
4a7b100d1f18f0ede3f008080a19ed9de7f469bc326dfd376e3a4595de904403 | C/C++ | 2,165 | 86 | /*
* This file is part of Healpix_cxx.
*
* Healpix_cxx is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* Healpix_cxx is... |
ceacdb41e97fba90eba728d0d3e938061580a88f86933db7d5f8a0eaaad4bc2d | C/C++ | 2,175 | 73 | #ifndef MetalNeuronType_h
#define MetalNeuronType_h
#include <c10/macros/Macros.h>
#import <ATen/native/metal/mpscnn/MPSCNNNeuronOp.h>
C10_DIAGNOSTIC_PUSH_AND_IGNORED_IF_DEFINED("-Wdeprecated-declarations")
#import <MetalPerformanceShaders/MetalPerformanceShaders.h>
C10_DIAGNOSTIC_POP()
#include <ATen/ATen.h>
names... |
f8b6914f91c7bdcc757c999289c0b3ac42b0b7d4688d0051614048e1d5d0c244 | C/C++ | 2,179 | 65 | #pragma once
#include <string>
#include <stdexcept>
#include <sstream>
#include <mkl_dfti.h>
#include <mkl_spblas.h>
#include <c10/util/Exception.h>
namespace at::native {
static inline void MKL_DFTI_CHECK(MKL_INT status)
{
TORCH_CHECK(!status || DftiErrorClass(status, DFTI_NO_ERROR), "MKL FFT error: ", DftiErrorM... |
167fffd68df99cb06185f0c815832d621f0a73d9bab553bc2bbd0db20d2b940f | C/C++ | 2,181 | 92 | #ifndef BFACTOR_REFINER_H
#define BFACTOR_REFINER_H
#include <src/image.h>
#include <src/jaz/gravis/t2Vector.h>
class IOParser;
class ReferenceMap;
class ObservationModel;
class BFactorRefiner
{
public:
BFactorRefiner();
void read(IOParser& parser, int argc, char *argv[]);
void init(
int verb, i... |
938a4d50d35a447f972dac26437174495553e6b67e8a902579877e624ebd4802 | C/C++ | 2,186 | 69 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2019 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
841252065e99831239243eb143185890f527b8bfb58699da7dad78b11c47accc | C/C++ | 2,195 | 88 | #ifndef CUDA_DEVICE_MEM_UTILS_H_
#define CUDA_DEVICE_MEM_UTILS_H_
#ifdef _CUDA_ENABLED
#include <cuda_runtime.h>
#include <curand.h>
#include "src/acc/cuda/cuda_settings.h"
#include "src/acc/cuda/custom_allocator.cuh"
#endif
#include <signal.h>
#include <fstream>
#include <iostream>
#include <vector>
#include <stdio... |
93c597dd633a90aacfc1a9f5f22ae6cc7bab1daeec428035d572af58b2c57a35 | C/C++ | 2,195 | 90 | /*
* Copyright (c) Facebook, Inc. and its affiliates.
* All rights reserved.
*
* This source code is licensed under the BSD-style license found in the
* LICENSE file in the root directory of this source tree.
*/
#pragma once
#include <algorithm>
#include <cassert>
#include <cstddef>
#include <cstdlib>
#include ... |
4e751bda540aa23b69e2d37fc44025a9b0458248655212f5b12a570fcd516b6a | C/C++ | 2,200 | 54 | /*
* Copyright (c) Facebook, Inc. and its affiliates.
* All rights reserved.
*
* This source code is licensed under the BSD-style license found in the
* LICENSE file in the root directory of this source tree.
*/
#pragma once
#include <stddef.h>
#include <stdint.h>
#include <qnnpack/common.h>
#include <qnnpack/... |
16ed38dbdd4c31da0ba61042131dc8706f24b9fdd850fda67cfce1d465b83bd1 | C/C++ | 2,207 | 65 | //********************************************************************************************************************
// Processor.h
//********************************************************************************************************************
#include "FileDataBucket.h"
#include "GeneralOperations.h"
//para... |
238b8a5204635df854d58b4c7bf91b1346dec598060676a1c343bc850038b28f | C/C++ | 2,209 | 46 | /***************************************************************************************************
* Copyright (c) 2017 - 2022 NVIDIA CORPORATION & AFFILIATES. All rights reserved.
* SPDX-License-Identifier: BSD-3-Clause
*
* Redistribution and use in source and binary forms, with or without
* modification, are p... |
386f11aca992753177dc1df4f40dcd951035e725b1ff81f9318dd1ae7ec743f9 | C/C++ | 2,215 | 70 | // This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
// This program is distributed in the hope that it will be use... |
c0b2c16ec50f588963cface5af64821d5c9cd0335af44781ff6bf3ced648fe65 | C/C++ | 2,230 | 55 | // This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
// This program is distributed in the hope that it will be use... |
3f15fb4483343d97512f82a476b7ff004301a37e62e6bd3ed73b9ef4b24a94dd | C/C++ | 2,239 | 81 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
4c3a94c17e2addf7159980f85cb718130cd503b40c8006152676faff842757eb | C/C++ | 2,240 | 62 | #pragma once
#include <ATen/core/List.h>
#include <ATen/native/ConvUtils.h>
namespace at::native::quantized {
namespace {
// MakeConvOutputShape used from both CPU and CUDA libraries
// and exporting symbol from torch_cpu would probably take more storage
// than duplicating implementation which likely be inlined away
... |
ea0679afee475fe0d5807e66ab126d3fb5106ed4861a1ed2263954308d3ce6eb | C/C++ | 2,246 | 61 | // Stateless Philox-4x32 PRNG implementation for CPU.
//
// CPU counterpart of ATen/cuda/StatelessPhilox4x32.cuh. Given (seed, offset)
// returns 4 pseudo-random uint32 values with no mutable state.
//
// The Philox-4x32 cipher operates on a 128-bit counter. The full counter
// is (offset_lo, offset_hi, subsequence_lo,... |
1ce8a936be4e434ede42ca12d738e922ce1e5c3c4e57183515c38b311a6edb02 | C/C++ | 2,251 | 64 | /*
* This file is part of Healpix_cxx.
*
* Healpix_cxx is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* Healpix_cxx is... |
53c3d754e168bfeb19e84b4481c4e8001b6c57d5c83c24a80cae36fa71bc46f7 | C/C++ | 2,252 | 59 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
d55629f73fb737a3dd5c7a4fabc977c2afb1b54bcd83bdabde7458414df60243 | C/C++ | 2,262 | 112 | #ifndef __LIBGRAVIS_STRING_FORMAT_H__
#define __LIBGRAVIS_STRING_FORMAT_H__
#include <sstream>
#include <iomanip>
#include <stdint.h>
namespace gravis
{
/**
* Usage
* std::string name = StringFormat("Dies sind ")(12)(" Zahlen.");
* std::string name = StringFormat("Dies sind ")(12, 4, '0')(" Zahlen.");
... |
61354b5f72fa1f0a1a4b2a897fb646d8962b52032555e70c74a8ece49057b614 | C/C++ | 2,272 | 65 | //********************************************************************************************************************
// Processor.h
//********************************************************************************************************************
#include "FileDataBucket.h"
#include "GeneralOperations.h"
... |
f3b9a3e6d64adcd1204e503baf0bf1d6c18b740a986f72d1a03303cb3c7f7591 | C/C++ | 2,272 | 71 | #pragma once
#include <ATen/core/Tensor.h>
#include <ATen/AccumulateType.h>
#include <ATen/Dispatch.h>
#include <ATen/TensorUtils.h>
namespace at::native {
inline void multilabel_margin_loss_shape_check(
int64_t& nframe,
int64_t& dim,
const int64_t& ndims,
const Tensor& input,
const Tensor& targe... |
2a6028a0f08d37a64f706478f9338722a3fec00542155690ea0b9f6dec6a39a7 | C/C++ | 2,279 | 79 | #ifndef __LIBGRAVIS_PROGRAM_OPTIONS_H__
#define __LIBGRAVIS_PROGRAM_OPTIONS_H__
/**
* \file
* This headers includes the boost program options header, disabling the warnings such that we can still have our programs compile with -Werror
* Also it defines the MACROS PO_SWITCH and PO_VALUE, which make option definitions... |
65a8a8a7b3cf738c22cb8fd5447c4a918135a100f58528f8687a3318f4851cc4 | C/C++ | 2,279 | 75 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
62b939a9d79db3be5bebdff401c9dd4d9d0c8a5ba64c4280a2789df7b8535fbc | C/C++ | 2,284 | 91 | /* Portions of this code are under:
Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved.
*/
#ifndef HIP_DEVICE_MEM_UTILS_H_
#define HIP_DEVICE_MEM_UTILS_H_
#ifdef _HIP_ENABLED
#include <hip/hip_runtime.h>
#include <hiprand/hiprand.h>
#include "src/acc/hip/hip_settings.h"
#include "src/acc/hip/custom... |
98285d85bc7823816bc59ec258914aadf9e31f2d448279121cd1597b5a143ad3 | C/C++ | 2,289 | 68 | #pragma once
#include <ATen/core/Tensor.h>
#include <ATen/Config.h>
#if AT_MKLDNN_ENABLED()
#include <ideep.hpp>
#include <dnnl.hpp>
#ifndef DNNL_PREREQ
// oneDNN version check macro
// Checks if the current oneDNN version is >= the specified version
#if defined(DNNL_VERSION_MAJOR) && defined(DNNL_VERSION_MINOR) && ... |
3f5f0b88547cf2a3a5296b3712ae9ba7f2b7b22e9598dbf2d36918b084f7b473 | C/C++ | 2,293 | 93 | #pragma once
#include <c10/util/Exception.h>
#include <c10/util/ParallelGuard.h>
#include <c10/util/SmallVector.h>
namespace at {
template <class F>
inline void parallel_for(
const int64_t begin,
const int64_t end,
const int64_t grain_size,
const F& f) {
TORCH_INTERNAL_ASSERT_DEBUG_ONLY(grain_size ... |
0c9d62d83922e39a251d887be6a9c0fb754d95e5a74699cca6abd0fe5b2fa223 | C/C++ | 2,345 | 95 | #pragma once
#include <ATen/core/TensorBody.h>
#include <c10/util/Exception.h>
namespace at {
// NOLINTNEXTLINE(cppcoreguidelines-special-member-functions)
class TORCH_API OptionalTensorRef {
public:
OptionalTensorRef() = default;
~OptionalTensorRef() {
ref_.unsafeReleaseTensorImpl();
}
OptionalTensorR... |
6cd11e91239bd48615ab67ebfe3cba9e6af1f7e2b6fe295dd3dd835bb21fdd5d | C/C++ | 2,348 | 92 | /******************************************************************************
** Title: tArrayIO.h
** Description: Input/Output for tArrays.
**
** Author: Michael Keller, 2006
** Computer Science Department, University Basel (CH)
**
**************************************************... |
59c1a566a7b34269cf65b7f4f70106d4f2c277d7841c0afa6f96c65bf50151da | C/C++ | 2,349 | 62 | #pragma once
#include <c10/metal/common.h>
// N is the maximum allowed number of dimensions in the input and outputs. The
// maximum allowed pooling dimensions is N-2, because the input may have up to 2
// leading dimensions that are not pooled. To support up to 3-D pooling, N=5 is
// the default.
template <unsigned N... |
a4a0cdb9c72ff873bb6b6a2754d27487c5340db6b48bee3dc8e7d709926b239c | C/C++ | 2,359 | 95 | #pragma once
#include <ATen/Tensor.h>
#include <ATen/core/ivalue.h>
#include <ATen/native/mkldnn/Common.h>
#if AT_MKLDNN_ENABLED()
namespace at::native::mkldnn {
const static std::map<std::string, ideep::attr_t> fusion_attr_map = {
{"none", ideep::attr_t()},
{"relu", ideep::attr_t::fuse_relu()},
};
using S... |
9d2b27d905eaf32f0c9db88d165853be7942461afc65a37d2d09a6d60f584274 | C/C++ | 2,369 | 64 | #pragma once
namespace at::native { inline namespace CPU_CAPABILITY {
// n: number of function arguments (arity)
// traits: function_traits (see FunctionTraits.h)
// s: index of scalar argument or -1
template <int n, int stride_index, typename traits, int s=-1>
struct IsContiguous {
static bool eval(const int64_t* ... |
41fe4082a12665e2d34f3ea28e6cbf5cf57bcb931618ee9e7e563b3bcad52d2b | C/C++ | 2,376 | 93 |
#ifndef TOMO_CTF_FIND_H
#define TOMO_CTF_FIND_H
#include <string>
#include <src/jaz/optimization/optimization.h>
#include <src/jaz/image/raw_image.h>
#include <src/jaz/image/cutting.h>
#include <src/jaz/image/resampling.h>
#include <src/jaz/gravis/t4Matrix.h>
#include <src/jaz/gravis/t2Vector.h>
#include <src/error.h... |
40c21b1bfe20129d9e1d4bfffeb1c4ade89a3a12243a1ebfdb646734949276e6 | C/C++ | 2,381 | 86 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
9fda256c0e83c1e2cbeea54ab64857386522dbba4ba2bc0fe3a1f9208a409e00 | C/C++ | 2,381 | 92 | #pragma once
#include <utility>
#include <c10/util/ArrayRef.h>
#include <ATen/core/List.h>
namespace at {
// This class allows you to write variadic functions which
// call a (possibly overloaded) function on each argument,
// in order. This is most commonly used in autogenerated code,
// where it is convenient to... |
d18d56f5b06b38de00d21c2b7d8488fb3688f2cd51fe48d35a44f289815e8319 | C/C++ | 2,399 | 71 | #include <ATen/Tensor.h>
#include <ATen/native/metal/MetalContext.h>
#include <ATen/native/metal/MetalCommandBuffer.h>
#include <ATen/native/metal/MetalTensorImpl.h>
#include <ATen/native/metal/MetalTensorImplStorage.h>
#if (defined(__ARM_NEON__) || defined(__ARM_NEON))
typedef float16_t fp16_t;
#else
typedef uint16_t... |
07d71c9be68f25c94d2f5e41e9341faa13534cd40493d88596e9fd2d0dea42a0 | C/C++ | 2,400 | 105 | #pragma once
#include <ATen/core/Tensor.h>
namespace at::native {
// Check the pointer and stride alignment cuDNN requires for varlen tensors.
bool has_aligned_varlen_layout(const Tensor& tensor);
void run_cudnn_SDP_fprop(
int64_t b,
int64_t h,
int64_t s_q,
int64_t s_kv,
int64_t d_k,
int64_t ... |
9c03c3dcae519b8c3095ceec8421d7d7bebb5764af5463bba17188f5ea193d62 | C/C++ | 2,400 | 90 | #pragma once
#include <ATen/core/Tensor.h>
#include <ATen/Config.h>
#include <ATen/native/LinearAlgebraUtils.h> // For TransposeType
namespace at::native {
// result = beta * result + alpha * gemm(mat1, mat2)
TORCH_API void mkldnn_matmul(
const Tensor &mat1,
const Tensor &mat2,
const Tensor ... |
4da30e608310e2df385ca137f6fc8ce0805477a14d645d9217b6a0623d62270b | C/C++ | 2,401 | 78 | #pragma once
#include <c10/core/Device.h>
#include <c10/util/Exception.h>
#include <c10/util/Registry.h>
#include <ATen/detail/AcceleratorHooksInterface.h>
namespace at {
constexpr const char* XLA_HELP =
"This error has occurred because you are trying "
"to use some XLA functionality, but the XLA library has n... |
eaad0325f8dd341540a72c4203b52a5b15846a6e799b5a162eb227aa370b01db | C/C++ | 2,406 | 68 | #pragma once
#include <c10/core/DispatchKeySet.h>
#include <c10/macros/Macros.h>
#include <c10/util/Metaprogramming.h>
#include <c10/util/Type.h>
#include <cstring>
#include <typeindex>
namespace c10::impl {
// A CppSignature object holds RTTI information about a C++ function signature
// at runtime and can compare ... |
fc7e24d6de4c2fb3959f850333e440b7fd3fbd5e214f902fb7cbc06ea834fff1 | C/C++ | 2,410 | 75 | // Copyright © 2022 Apple Inc.
#pragma once
#include <ATen/Generator.h>
#include <ATen/detail/MPSHooksInterface.h>
#include <ATen/mps/MPSEvent.h>
#include <optional>
namespace at::mps {
// The real implementation of MPSHooksInterface
struct MPSHooks : public at::MPSHooksInterface {
MPSHooks() {}
void init() co... |
6fc81cc54fdf3d3b199f067bdac8e3c3c11fb968e51da507d7d91f5f71383899 | C/C++ | 2,411 | 57 | /* FILE array.h */
/* Definitions/declarations common to array.c and list.c */
#include <stdio.h>
#include <ctype.h>
#include "defs.h" /* Channel definitions */
/* ******************************************************************** */
#define MAX_REGISTERS 135 /* Accumulator to store trials (162,106,55) */
#defi... |
8ce5a28533aeb4ce4576d606454f4188a2601f9a2fb7caa28d380c17020501c2 | C/C++ | 2,413 | 46 | #pragma once
#include <ATen/core/ivalue.h>
#include <ATen/core/stack.h>
#include <ATen/core/boxing/KernelFunction.h>
#include <ATen/core/dispatch/Dispatcher.h>
#include <c10/util/Metaprogramming.h>
#include <torch/library.h>
namespace at::native {
// This function implements a boxed fallback to CPU.
// External back... |
c3c25592ef66e97dd7652571279867751b9697f2f776e785698b431d941e6cdc | C/C++ | 2,417 | 70 | #ifndef UDP_RECEIVER_H
#define UDP_RECEIVER_H
#include "udp_client.h"
#include "inkube_package.h"
#include "helper_functions.h"
#include <vector>
#include <string>
#include <thread>
#include <atomic>
#include <sys/socket.h>
#include <sys/un.h>
#include <poll.h>
#include <array>
#include <zmq.hpp>
#include <iostream>
... |
cce97d92a4d2e61ce4f55a9a21e70e24b47b8ac2cc2bdd25c85fd000eef2f217 | C/C++ | 2,426 | 86 | #pragma once
#include <ATen/core/GeneratorForPrivateuseone.h>
#include <ATen/detail/AcceleratorHooksInterface.h>
#include <c10/core/Allocator.h>
#include <c10/core/Device.h>
#include <c10/core/Storage.h>
#include <c10/util/Exception.h>
namespace at {
struct TORCH_API PrivateUse1HooksInterface : AcceleratorHooksInt... |
a85f1f47dc58e94791a196362c700146daf22313da20fc1eb3c5e83422765811 | C/C++ | 2,435 | 68 | // This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
// This program is distributed in the hope that it will be use... |
dcf2bb1e13bb4b06cfa752486e1a627514b76c8d336262a6d9710c2a0a355a0a | C/C++ | 2,436 | 58 | /*
* Copyright (c) Facebook, Inc. and its affiliates.
* All rights reserved.
*
* This source code is licensed under the BSD-style license found in the
* LICENSE file in the root directory of this source tree.
*/
#pragma once
#include <stddef.h>
#include <stdint.h>
#include <qnnpack/common.h>
#include <qnnpack/... |
9cd058e38cc96c40e75d32ab86a4adf9d6eea9ca2ceed8f671b9eb517ba961d3 | C/C++ | 2,437 | 130 | #ifndef GP_MOTION_MODEL_H
#define GP_MOTION_MODEL_H
#include <src/jaz/gravis/t3Vector.h>
#include <src/jaz/tomography/particle_set.h>
class Tomogram;
class GPMotionModel
{
public:
struct Parameters
{
double sig_vel, sig_div;
bool params_scaled_by_dose, sqExpKernel;
int maxEDs;
};
GPMo... |
08e5946b7eec395f1e0f1ee6c44a1b4d7a7dba62743af6bc77def973c1e7afe7 | C/C++ | 2,439 | 66 | /***************************************************************************
*
* Author: "Sjors H.W. Scheres"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... |
21c91dd9219b2fb6d2c4527e0e4968a416ec76be67f93b78190423f887757ce2 | C/C++ | 2,446 | 61 | #pragma once
#include <c10/util/complex.h>
#include <ATen/NumericUtils.h>
namespace at::native {
inline namespace CPU_CAPABILITY {
// custom min and max to be used in logcumsumexp for complex arguments
template <typename scalar_t>
std::pair<c10::complex<scalar_t>, c10::complex<scalar_t>> _logcumsumexp_minmax(c10::co... |
9284b6ef5cad17e2ac2dedd9ae6017ea7c7f2e3a759c2213cfe6fc913ce268ad | C/C++ | 2,458 | 85 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If ... |
b9e875c35e4e1d901b947cb241bdd9a295d4a0cd1db44ddf36e4471335a380d4 | C/C++ | 2,461 | 110 | #pragma once
#include <iterator>
#include <list>
#include <unordered_map>
#include <utility>
namespace at::native::onednn {
template <
class key_t,
class value_t,
template <typename...> class map_t = std::unordered_map>
class lru_cache {
public:
using value_type = std::pair<key_t, value_t>;
using li... |
a9324e884bc344cfc997afa83d40fa757c3b7a0795ed9d0bffc4e1f079d83077 | C/C++ | 2,468 | 92 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
946281f7a96d4fa6d1a5daf5a4fdba970d770a5c9480c10788dd8d8bcd5e1d6b | C/C++ | 2,469 | 67 | #include <ATen/AccumulateType.h>
#include <c10/core/Scalar.h>
#include <limits>
namespace at::native {
inline void arange_check_bounds(
const c10::Scalar& start,
const c10::Scalar& end,
const c10::Scalar& step) {
// use double precision for validation to avoid precision issues
double dstart = start.... |
a6a287f115b7f183548e89d89aa4fd99e7a99b7edcc915aef3de70e16c3ccdbc | C/C++ | 2,469 | 86 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
361725a9899fc9e0521e63e17607488df80a26f017f42af1d00370310b0bd838 | C/C++ | 2,472 | 50 | /***************************************************************************
*
* Author: "Jasenko Zivanov"
* MRC Laboratory of Molecular Biology
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foun... |
0e045a6e9a9e959ebf9d947f341d1f68d57b7936aba0a64b70f88102f46a1bb0 | C/C++ | 2,486 | 68 | #pragma once
#include <c10/core/SafePyObject.h>
#include <c10/macros/Export.h>
#include <c10/util/python_stub.h>
#include <optional>
#include <stack>
#include <string>
#include <utility>
namespace at {
namespace impl {
struct TORCH_API SavedTensorDefaultHooksTLS {
// PyObject is defined in c10/util/python_stub.h... |
74c34c9f6e8c5a6f78c08a39df85c10945b750c3c400b1c706eb3ef8c5a1705e | C/C++ | 2,487 | 77 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2016 Benoit Steiner <benoit.steiner.goog@gmail.com>
// Copyright (C) 2019 Rasmus Munk Larsen <rmlarsen@google.com>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If ... |
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