sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
9a8a97b37186b91d8b202950972de42365ebf1dc77bc4160c07acaba9ddccfd3 | Java | 11,725 | 319 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
799cddcfca3dd3a47903844366e954e3292b9a52528242842029b80d2cfa9f75 | Java | 11,728 | 309 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
cdf8b2acf29d1b2a26aed44851cb62909820625b4b0be037603ba46f61907131 | Java | 11,738 | 289 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
1b55db3ec2b889a3d7f732773f9dc1678af6b2b6d685917f7291f9a61978ab36 | Java | 11,753 | 254 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
8484f34c6870ac9101a20658953c7b4aa514f4262776a69b0a4084c5eceebe28 | Java | 11,760 | 305 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
eeabcd43699e2ece7e71f02f26253858cc6635a8fc3e8b0580fe700551b5a792 | Java | 11,766 | 326 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
e49351e00dc99544ee8d4858507b5c465587605f6aec0d43c5b0a65440b85555 | Java | 11,781 | 403 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
d91791b2511c39a87c3ba5bc4ea798224ecb91a30b43ef352225b4708aa32848 | Java | 11,804 | 375 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1915c74c6ff3d1998deb55d90c2e2dce0d3ee279753936356272d0f43dd1fe9b | Java | 11,822 | 384 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
d941be07c439e96a5be982dfc7eb27b2cab2e6683165770f9227a6a40dafa303 | Java | 11,851 | 231 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
a043214353da4cc096374840de1485dd37be9f82c9b3700db22dedc78a2868cd | Java | 11,873 | 310 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
f21d764d6ad37e16d94dd3e7c409b357d0724049f5bf239011aa155b5e65a1bc | Java | 11,873 | 299 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
a3f2f34a1d5e83c63a6810e4e5f80a4dc2d85daac3fa389ea003c828590fbd46 | Java | 11,905 | 328 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
9a4f4b7285a01256859bd3379fe34e3bdcb46266fb2e627875f13597243ebc1d | Java | 11,918 | 330 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
9c6c304a1bb0e31bb3b474d61d4e360b49f210d6bf81e7706f232a64a2de3bce | Java | 11,971 | 309 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
ceb9eabd3b59fb2f292b8abc901d66a2433f7c6e80c62589d838463b8a2edc3e | Java | 11,986 | 262 | package edu.cmu.tetradapp.editor;
import edu.cmu.tetrad.graph.Node;
import edu.cmu.tetrad.hybridcg.HybridCgModel.HybridCgIm;
import edu.cmu.tetrad.hybridcg.HybridCgModel.HybridCgPm;
import edu.cmu.tetrad.util.TMath;
import javax.swing.*;
import javax.swing.table.AbstractTableModel;
import javax.swing.table.DefaultTab... |
cb3c8907ca45d04876591a847ece59274c848dd8f42222d48f326eed6e434a15 | Java | 12,001 | 276 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
9277313be34c9412eaf2ad76588b1e317a57e2b7f8f86e25aebf7c266bb9fcfd | Java | 12,010 | 373 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
b8a3a38a3e11be884f057af0ea30a0aa1a071ce2ba0a9b0a3389ec5293db9cf3 | Java | 12,018 | 253 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
bf3ba67cc6fca1cb0db8438675a735afcdd7fd21f0b61a37b0b6c002635c0782 | Java | 12,039 | 300 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1edb18e54f648a229422cf6a8e9ae6e04e33ce988bc6d4a232c32237bb48e5a0 | Java | 12,044 | 389 | package edu.cmu.tetradapp.editor;
import edu.cmu.tetrad.data.ContinuousVariable;
import edu.cmu.tetrad.data.Histogram;
import edu.cmu.tetrad.util.TMath;
import edu.cmu.tetradapp.workbench.WorkbenchStyle;
import javax.swing.*;
import java.awt.*;
import java.awt.event.MouseAdapter;
import java.awt.event.MouseEvent;
im... |
2b4e0ec5d0098599257f5f35d7e59bead5add86d4971fb3a2c51be488ebc3090 | Java | 12,053 | 348 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
093c355b7e686466d815017e74efa4b0b083d04fe069c632c0a9273d5c1b17e5 | Java | 12,071 | 413 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
58b8dd8e29f57b212b8edb752244b1c8b51562144eeba87013ead4e39819769e | Java | 12,098 | 302 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
d7cdee68045e4d2a00e6a5ace436540d02e4c2a41a8c0671fb31cdca40757cf0 | Java | 12,107 | 377 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
29dce47f713f19a2c533b0ec478fe10cd545dd08afeea860579523fa69efad4a | Java | 12,140 | 251 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
94cdb2013c00482c70d3bfffc150dfce98a3f5cffe7f9b5d45569398084d1dd6 | Java | 12,184 | 313 | package edu.cmu.tetrad.search.cdnod_pag;
import edu.cmu.tetrad.graph.EdgeListGraph;
import edu.cmu.tetrad.graph.Endpoint;
import edu.cmu.tetrad.graph.Graph;
import edu.cmu.tetrad.graph.Node;
import edu.cmu.tetrad.util.TMath;
import edu.cmu.tetrad.util.TetradLogger;
import java.util.*;
import java.util.function.Functi... |
08e84eb6643b447133666a62bc230ffb9c566326b8b12f2f78ad2f034db132cc | Java | 12,188 | 281 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
8d856ec4b35da705100fb159fdc4e92f8caf617fb9951164c95751c7aad518f9 | Java | 12,199 | 374 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
8b3ef606fe40963ad18ace647d3ad84604769efdedd2cc422926f82dfd7eb45e | Java | 12,218 | 317 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
972ec4e0161db276a3841adc490b07e5cdcafd2046b6aa25820844fdd6eae45b | Java | 12,218 | 399 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
977f3e567692aa079192e899a84607b8c9c85b950bfbe0489a486b83dc170c9f | Java | 12,235 | 285 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
13882816ccabbfaae2e42ec76f26ab7bba8dc415db543da868032abdf90fed75 | Java | 12,239 | 388 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
077255ce3091853fd1fd20a931f7d31868af0d8e97b54b691bdfc3f60af7676d | Java | 12,250 | 326 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1c2458251e4771773f2a6ca50143eb9476e1f497191acb0728575d223a814c0e | Java | 12,257 | 360 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
7c615b0c6c90ac59797f9321b703c5522300cffa87a3aeade628f0c0b816b90a | Java | 12,269 | 502 | import libsvm.*;
import java.applet.*;
import java.awt.*;
import java.util.*;
import java.awt.event.*;
import java.io.*;
public class svm_toy extends Applet {
static final String DEFAULT_PARAM="-t 2 -c 100";
int XLEN;
int YLEN;
// off-screen buffer
Image buffer;
Graphics buffer_gc;
// pre-allocated colors
... |
ac0fecea8f62fedd647c3d5cd12102ff4248f4d1238ebf7ce8c6d5fd644bc3c0 | Java | 12,277 | 402 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
cc21c423f57dd5ffd1541c85701d1a4bf5352389f1b2acf15e305b79bf84e257 | Java | 12,281 | 294 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
0ef3969b188d2da0d8bd74294b7ba1627d42630d28074ede09955fd6b813901c | Java | 12,284 | 266 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
8cb816370ca078145fdbac311ead98ffe50edb3b901e899651a1d9b212eb0290 | Java | 12,290 | 315 | package edu.cmu.tetrad.search;
import edu.cmu.tetrad.data.CorrelationMatrix;
import edu.cmu.tetrad.graph.Node;
import edu.cmu.tetrad.search.ntad_test.Cca;
import edu.cmu.tetrad.util.RankTests;
import edu.cmu.tetrad.util.TetradSerializable;
import org.ejml.simple.SimpleMatrix;
import java.io.Serial;
import java.util.A... |
0804e3479e96ad7ec6073e51ad7f019e1ccbd40dd7c0629bb186907505a1e91e | Java | 12,305 | 347 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
3814bd5e5f083eecb20ac8bcad73684ad082e24c95bdc76c009c4223fbd5965f | Java | 12,316 | 333 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
b3a3fb83c12b965ed83ea6de79a6fc0d88cc3120be58ce5a06ed631ca720d0bb | Java | 12,321 | 318 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
611ec60ab9daa676d8afcc62164a340390e934f7c73be5ca5b67fca6f0e69461 | Java | 12,331 | 360 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
7d5c7ac05385d0565fa428a7f7e8d8bbe712721187d98544ba8d4ba897c669b6 | Java | 12,335 | 354 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
d748675b495ba92cff538b61edc377a5498e9e10fb2973a476f578c5a6200779 | Java | 12,384 | 333 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
dacd8d03b8a6e2b0e26d74cf20c45eb25c1cf44293c74465dda0d19d50787a1b | Java | 12,428 | 392 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1a9f08cc5a04d4c83629a700d12a1af050e3e847fb5d0d42f4e413e202bd8004 | Java | 12,435 | 337 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
74c005127175d95c9930e51ce2621dc8f02b179b96a208fdb2a8997298e7928b | Java | 12,455 | 264 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
c10f05c3919b210ee6266d7e9174f45d9d53303d18fdc2f0eace8c97613ab925 | Java | 12,488 | 223 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
b45f6166f990818153d98251120da1266a05c8b93141da25d4d1f9777c69a670 | Java | 12,491 | 259 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
0308d69df564f9f2e69a1d842a2b4f7ab9c8c69029fcd571570c4305557613a5 | Java | 12,492 | 381 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
10a43b1394e905e9283ad9ef44382991c06cd5fe7956fbd2d1076cbe2404f4cb | Java | 12,501 | 348 | package edu.cmu.tetradapp.editor;
import edu.cmu.tetrad.util.TMath;
import edu.cmu.tetradapp.workbench.WorkbenchStyle;
import javax.swing.*;
import javax.swing.border.LineBorder;
import java.awt.*;
import java.awt.geom.Point2D;
import java.text.NumberFormat;
import java.util.LinkedHashMap;
import java.util.Map;
impo... |
8d87bc1342322e39080c2bf223657abfa32d39d8adeefc5fdc5e720e3cbcf3ec | Java | 12,506 | 335 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
15218bb62d9b2392cc9d420e9dafb62f6c5b934094aee22270a19659941b408b | Java | 12,548 | 320 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
1d1fccf9ab601f0a7fbc2e578d97a9d769e40460ffd09d75292939f80a97e0db | Java | 12,556 | 253 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
4a9df40a648a3db34ff8b714ca9f6a283fb52cb4deb9f32bbb432ea5d7539b3d | Java | 12,559 | 323 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
f128f40b4a8444cdd9d8c93109ff6e2d05691c865aa8a14e92ee4cf3e6799ba6 | Java | 12,566 | 373 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
11bef89698eacfc5532d55f4f23c08ce55a7df683da7739dc82d8621d4f91381 | Java | 12,580 | 282 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
c61de864a755cc8288f7d0e7266bd02bdc09ee9b742679a73bacca1066e20aa3 | Java | 12,624 | 454 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
b70a0fc4ca51056e438c66b55629cca6ba5abfd55cd9f23a3008fe070544fe53 | Java | 12,632 | 366 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
5a957be18e17255a538ebfa6d4226c6bf89953673df1727dba04488c61bf0a1e | Java | 12,649 | 314 | package edu.cmu.tetrad.search.test;
import edu.cmu.tetrad.data.DataModel;
import edu.cmu.tetrad.data.DiscreteVariable;
import edu.cmu.tetrad.graph.IndependenceFact;
import edu.cmu.tetrad.graph.Node;
import edu.cmu.tetrad.search.score.TRffBicScore;
import edu.cmu.tetrad.util.TMath;
import edu.cmu.tetrad.util.TetradLogg... |
f19bb1548b80118fb826cb75be8e8408b362b9c9002c8e904539e006e6ca2b42 | Java | 12,666 | 368 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
d0b2b2f9d8d0ebdc71838194f5373184b75618b99fa99a82209d93360bb23d91 | Java | 12,683 | 265 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
3cc2398674bafea6e8e58850de0398f37795eeb5dfbf71ef9baec15e53845edb | Java | 12,693 | 384 | /*
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of t... |
071cc186be54dcbf0e199eefd9f1e868de3c3ce8d896513b84bf7b750ffb557c | Java | 12,701 | 316 | package edu.cmu.tetrad.search.harness;
import edu.cmu.tetrad.algcomparison.independence.ChiSquare;
import edu.cmu.tetrad.bayes.BayesPm;
import edu.cmu.tetrad.bayes.MlBayesIm;
import edu.cmu.tetrad.data.ContinuousVariable;
import edu.cmu.tetrad.data.CovarianceMatrix;
import edu.cmu.tetrad.data.DataSet;
import edu.cmu.t... |
0e799520a7882f6fc099c7f83fcd889439fd7a6c35d83cf7e56b870c89d78083 | Java | 12,701 | 336 | package edu.cmu.tetrad.graph;
import org.junit.Before;
import org.junit.Test;
import java.util.List;
import static org.junit.Assert.*;
/**
* Tests for ReplicatingGraph with LagReplicationPolicy.
*
* Node naming convention: "X" = X at lag 0, "X:1" = X at lag 1, "X:2" = X at lag 2, etc.
*
* Key invariant: any mu... |
01cda0e7edf18fdf230a1e9e1b0dbd17dbd2046f96cac03229a81ba6a38a6e7d | Java | 12,730 | 297 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
3880aa70acb08fcc64b919b1892aae6c947cc6ab9f97c9d731a90826e6069ac5 | Java | 12,743 | 241 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
234c920aa1f6da2eb1df0e8c4a3fc55d8833b0242fca0f5bc209ee95ee451000 | Java | 12,791 | 299 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
65312b885efb0d945a2c8ac9876950616fe2adac7d3a16c5745ca107f2295069 | Java | 12,836 | 321 | package edu.cmu.tetradapp.editor;
import edu.cmu.tetrad.data.DataSet;
import edu.cmu.tetrad.graph.Graph;
import edu.cmu.tetrad.sem.DagMetric;
import edu.cmu.tetrad.sem.DagMetricResult;
import edu.cmu.tetrad.util.NumberFormatUtil;
import edu.cmu.tetradapp.model.DagModelScoreComparisonModel;
import edu.cmu.tetrad.util.T... |
caf19f49378eabce259edab275297b6c6f3a30043f4c7dac6d786e357ffe7bb9 | Java | 12,839 | 389 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
72ad3e4a8d1272b3bd9425acf36149ac1bbe75ff0d961a86df5749ac61533327 | Java | 12,844 | 413 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
f6346626ec2d38a65ce8d27cd3ed0cc763b4dccc5b6fecf3bbe1bf52d1547308 | Java | 12,871 | 365 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
fc3c82865f562110cde46788a27e9c588ef51d57c9cf6cdbe3b2457991717eb9 | Java | 12,897 | 349 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
5a066a0cabe6de0b4c8225dfb60b1d23e10bc62500d20f301a32e9d2d9bca7f7 | Java | 12,918 | 265 | package edu.cmu.tetrad.search.utils;
import edu.cmu.tetrad.data.Knowledge;
import edu.cmu.tetrad.graph.*;
import edu.cmu.tetrad.search.test.IndependenceTest;
import edu.cmu.tetrad.search.test.MsepTest;
import edu.cmu.tetrad.util.SublistGenerator;
import java.util.*;
/**
* Harness drop-in: checks whether the graph F... |
35e5a081a34553f2a20d147eb02a52dc2e1e8d04110231fd420073102c70784e | Java | 12,925 | 294 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
e6516b0e2b7dd74344a5d224fccff0be43bc122d8dd6d2942761c1f0208ed3f8 | Java | 12,950 | 407 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
91a86ce59b67e50231fe13c7fc1cc10621c1e4a06474ff930603ba367611df72 | Java | 13,002 | 322 | package edu.cmu.tetrad.search.test;
import edu.cmu.tetrad.data.DataModel;
import edu.cmu.tetrad.data.DataSet;
import edu.cmu.tetrad.graph.IndependenceFact;
import edu.cmu.tetrad.graph.Node;
import edu.cmu.tetrad.search.score.LegendreBicScore;
import edu.cmu.tetrad.util.NaturalSort;
import edu.cmu.tetrad.util.TMath;
im... |
a7170423975a843e983cba99a5594b1eb578620213b189045c8ae0290d500683 | Java | 13,029 | 357 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
7ac0e2357488df2b975e9afae0c5910925357c09a8652db6afb1e3c42e6c97a6 | Java | 13,069 | 356 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
3f809032f891b623d244b2a058d849f6373615a45a6199d73a917c1252efd803 | Java | 13,111 | 236 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
c721a40aca81bf0dc57e19784b312f9412a2d35c3b56e869d50a1bb8c3276e9d | Java | 13,123 | 386 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
fa3f9104a71ee8ac44fe3ec441809786564a0185ac986e38f04f027e97f42477 | Java | 13,153 | 380 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
68318722a1bdb39a1fba91a24fd66b77e822608af2ff48cdb157ce61191f7b8a | Java | 13,154 | 400 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
3a0af219127931999775a53a68909400b9fb2e3fb67811f42eff1b88667712f0 | Java | 13,177 | 373 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
e0058e052682ede60fe52b39baf76dc7fdbd1f2221d48c3b2e937ba9bef35eaa | Java | 13,220 | 333 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
541b3d6be68b535954597923cc82549ac19bbbb9012b41ff474ceb29fa8a3034 | Java | 13,278 | 313 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
9d99f96af669613d95441c82eda003631fb9926b6f2861166c676b2253fee4f4 | Java | 13,301 | 416 | package edu.cmu.tetrad.search.mimic;
import edu.cmu.tetrad.data.Knowledge;
import edu.cmu.tetrad.graph.*;
import edu.cmu.tetrad.search.IGraphSearch;
import edu.cmu.tetrad.search.Pc;
import edu.cmu.tetrad.search.test.IndependenceTest;
import java.util.*;
/**
* A hybrid detect-mimic heuristic.
*
* <p>This version k... |
142d39ad1451271eeb35a7bcd9db2d94a21f1a0c037dd785adc15855e81e7c14 | Java | 13,302 | 338 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
5c5d6ba72c04d55ae082f89e3fdbdfa64efe1c2b70972f93c82cb51130d86497 | Java | 13,346 | 343 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
2c42e8ea9ae6405648f0fab0e002adfa1ca37c97d3c22f10ce84aa6846d4317b | Java | 13,352 | 360 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
e299e804d105a5743b2e9b3b408c4326100f8668d0c45dae81f8a5a0d9ca496a | Java | 13,354 | 432 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
3536edada3f7354969c084090f41e59b66c5bdc1bcc011bea7cbabaf103f44f8 | Java | 13,362 | 373 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
f2c181897a27ce8aefbee9f7f57c5147b1395d3b7941a8b4bed2ebb80b0a5622 | Java | 13,364 | 357 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
13e08c9547f7e7874f2fe48b620c6bd14258462e8457b549787485a7308ba624 | Java | 13,398 | 336 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
41aa96c85bace2833f5ffb1073838c5aef7403657ee5cc961b57c07c815a5c70 | Java | 13,404 | 305 | package edu.cmu.tetrad.search.harness;
import edu.cmu.tetrad.data.BoxDataSet;
import edu.cmu.tetrad.data.DataSet;
import edu.cmu.tetrad.data.VerticalDoubleDataBox;
import edu.cmu.tetrad.graph.Graph;
import edu.cmu.tetrad.graph.Node;
import edu.cmu.tetrad.data.ContinuousVariable;
import edu.cmu.tetrad.search.Conditioni... |
af2ad22216b862fdf00a1c1bdfbc636537469c97ad611679915410303ff0be2b | Java | 13,416 | 438 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
22824ec2034ad5ac67fbfd8e4c4067127fb1ce067e9a4bee47079989989867d6 | Java | 13,423 | 269 | // Standalone sanity check for EdgePriors, EdgePriorScore, EdgePriorTest.
// Compiles against fakes, not against real Tetrad classes: adapt the package and
// the FakeScore/FakeTest stubs, or lift the assertions into a JUnit test.
package edu.cmu.tetrad.search.harness;
import edu.cmu.tetrad.data.DataModel;
import edu.... |
114812657a9c4a1aef6166699f49974c4d1616eb77317cbbd60000699af36d8f | Java | 13,445 | 357 | package edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag;
import edu.cmu.tetrad.algcomparison.algorithm.*;
import edu.cmu.tetrad.algcomparison.score.ScoreWrapper;
import edu.cmu.tetrad.algcomparison.utils.AcceptsKnowledge;
import edu.cmu.tetrad.algcomparison.utils.TakesScoreWrapper;
import edu.cmu.tetrad.annotation... |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.