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2026-07-16 00:00:00
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biorxiv
10.64898/2026.04.22.720005
10.64898/2026.04.22.720005
2
Tracking the Fidelity of Internal Neural Representations with Error-In-Variables Regression
[ "Garon, I.", "Keeley, S.", "Williams, A. H." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.720005v2
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Neuroscientists are interested in identifying sensory and behavioral variables that correlate with neural activity. However, these correlations are often imperfect constructs. For example, internal represen...
biorxiv
10.64898/2026.04.22.719970
10.64898/2026.04.22.719970
1
Multiscale volume electron microscopy of the human liver maps vascular-cellular architecture, organelle dynamics and inter-organelle communication
[ "Xing, C.", "Xie, R.", "Mulcahy, B.", "Darbandi, A.", "Thoeni, C.", "Chandok, I.", "Lee, Y.", "Ma, J.", "Ali, F.", "McGilvray, I.", "MacParland, S.", "Zhen, M.", "Bader, G." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.719970v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The human liver performs essential metabolic functions including detoxification, nutrient processing, and bile production [ 1 ]. These diverse processes depend on intricate multiscale organization, where st...
biorxiv
10.64898/2026.04.22.719922
10.64898/2026.04.22.719922
1
Biomimetic miR-133a inhibitor activated scaffolds optimised for spinal cord repair promote neurite outgrowth and angiogenesis via neuronal cytoskeletal remodelling
[ "O'Connor, C.", "Mullally, R.", "Palomeque-Chavez, J. C.", "Dobricic, M.", "McCoy, E.", "Maughan, J.", "Stewart, R.", "Saha, C.", "O'Sullivan, J.", "McCarthy, H. O.", "Caldwell, M. A.", "Prehn, J. H. M.", "O'Brien, F. J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.719922v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Spinal cord injury (SCI) is a traumatic injury where a lesion cavity develops, host neurons are lost and spared injured neurons cannot regrow[ 1 ]. These neurons cannot regrow their damaged axons in part du...
biorxiv
10.64898/2026.04.22.719865
10.64898/2026.04.22.719865
1
Large-scale transcriptomic meta-analysis identifies novel therapeutic targets for ulcerative colitis
[ "Piernik, M.", "Adamiec-Organisciok, M.", "Skonieczna, M.", "Eder, P." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.719865v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Ulcerative colitis (UC) is a chronic inflammatory bowel disease (IBD) characterized by mucosal inflammation of the colon, typically beginning in the rectum and extending continuously ( 1 ). The disease foll...
biorxiv
10.64898/2026.04.22.719836
10.64898/2026.04.22.719836
1
Validated microsatellite markers for Gyrodactylus salaris: a toolkit for individual identification and genetic studies
[ "Aisala, H.", "Hansen, H.", "Lumme, J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.719836v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Genome-wide methods such as whole-genome sequencing/resequencing, reduced-representation libraries (e.g. RAD/GBS), and large SNP panels are now widely used in population and conservation genetics ( Allendor...
biorxiv
10.64898/2026.04.22.719835
10.64898/2026.04.22.719835
1
GATA transcription factors act as gatekeepers between the Wnt/β-catenin-mediated proliferation and differentiation in the intestinal epithelium
[ "van de Grift, Y. B. C.", "Weiss, T.", "Castellano, G.", "Zhong, W.", "Biechonska, Łucja", "Hellerstedt, K.", "Sigvardsson, M.", "Koch, S.", "Cantu, C." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.719835v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The Wnt/β-catenin signaling pathway is a conserved cell-to-cell communication mechanism that coordinates a wide spectrum of processes by activating the expression of Wnt target genes 1 . Wnt/β-catenin assum...
biorxiv
10.64898/2026.04.22.719677
10.64898/2026.04.22.719677
1
Massively parallel reporter assays for CYP3A4 enhancer variants alongside their native promoter
[ "Guttman, Y.", "Krupkin, B.", "Ahituv, N." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.719677v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Variation in gene expression is a key driver of phenotypic diversity, disease susceptibility, and variable response to therapy among individuals. A substantial proportion of this variation can be attributed...
biorxiv
10.64898/2026.04.22.719628
10.64898/2026.04.22.719628
2
Increasing absolute prey community density protects aposematic models and their imperfect Batesian mimics: Evidence from Neotropical Adelpha butterflies
[ "Robinson, A.", "Camargo-Cely, A.", "Meyersiek, J.", "Fetherston, C.", "Speroff, S.", "Mishi, M.", "Sanborn, K.", "Osipovich, M.", "Borzymowski, R.", "Herrmann, J.", "Finkbeiner, S.", "Buston, P.", "Mullen, S." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.719628v2
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Predator–prey interactions drive the evolution of diverse and complex anti-predator defenses and associated predator counterstrategies ( Ruxton et al., 2018 ; Skelhorn et al., 2016 ; Speed & Turner, 1999 )....
biorxiv
10.64898/2026.04.22.719490
10.64898/2026.04.22.719490
1
Brain B Vitamin Status and One-Carbon Metabolism Gene Polymorphisms are Associated with Cognitive Impairment in Alzheimer's and Parkinson's Disease
[ "Kalecky, K.", "Castaneda-Gill, J.", "Patel, S.", "Bottiglieri, T." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.719490v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Alzheimer’s disease (AD) and Parkinson’s disease (PD) are two most prevalent forms of neurodegeneration. While the primary affected brain regions and main symptoms are different, both diseases share several...
biorxiv
10.64898/2026.04.22.719367
10.64898/2026.04.22.719367
2
Targeting Gi/o-coupled GPCRs to inhibit nociceptors: insights from the serotonin receptor Htr1b and triptans
[ "Peng, J.", "Sanchez, B. T.", "Chirila, A. M.", "Zeng, X.", "DeLisle, M. M.", "Qi, L.", "Xiao, J.", "Lezgiyeva, K.", "Low, S. A.", "Woolf, C. J.", "Sharma, N.", "Ginty, D. D." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.719367v2
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Detection of noxious stimuli and the perception of pain are essential for avoiding potential injury. However, pain, defined as “an unpleasant sensory and emotional experience associated with, or resembling ...
biorxiv
10.64898/2026.04.22.718469
10.64898/2026.04.22.718469
1
Long-lived mammals contain more phosphorylation sites in the SIRT6 C-terminus that enhance PARP1 interaction and resistance to oxidative stress
[ "Gigas, J.", "Meadow, M. E.", "Guo, J.", "Lan, C.", "Hillpot, E.", "Martinez, J. C.", "Tombline, G.", "Bellomio, P.", "Welle, K. A.", "Swovick, K.", "Hryhorenko, J. R.", "Ablaeva, J.", "Ghaemmaghami, S.", "Seluanov, A.", "Gorbunova, V." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.718469v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Sirtuins are a family of deacetylases and mono(ADP-ribosyltransferases) that are essential for healthy aging. Broadly, it is thought that sirtuins help fend off many human age-related hallmarks like genomic...
biorxiv
10.64898/2026.04.22.718428
10.64898/2026.04.22.718428
1
CCZ1 is a modulator of TPC2 activity and melanoma cell migration
[ "Yang, Z.", "Feldmann, C.", "Ouologuem, L.", "Lin, A.", "Fenske, S.", "Michalakis, S.", "Bartel, K.", "Schaenzler, M.", "Grimm, C.", "Chen, C.-C.", "Wahl-Schott, C.", "Biel, M." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.718428v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Two-pore channels (TPCs) are Ca²⁺- and Na⁺-permeable cation channels that are widely expressed throughout the body and are localized to endolysosomal organelles ( 1 – 4 ). In both mice and humans, two TPC i...
biorxiv
10.64898/2026.04.22.716334
10.64898/2026.04.22.716334
1
Covalently linked peptides and membrane potential enable CyaA segment translocation
[ "Scilironi, G.", "Carvalho, N.", "Frangieh, J.", "Leger, C.", "Raoux-Barbot, D.", "Guijarro, J. I.", "Ladant, D.", "Cribier, S.", "Rodriguez, N.", "CHENAL, A." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.716334v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Whooping cough is a respiratory disease caused by Bordetella pertussis 1 , 2 , which remains particularly dangerous for unvaccinated individuals, especially newborns 3 . The adenylate cyclase (CyaA) toxin i...
biorxiv
10.64898/2026.04.21.720041
10.64898/2026.04.21.720041
1
Efficient and scalable modelling of cotranscriptional RNA folding with deterministic and iterative RNA structure sampling
[ "Courtney, E.", "Choi, E.", "Ward, M.", "Lucks, J. B." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.720041v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Computational RNA structure sampling is a core component of nearly all RNA ensemble modelling approaches [ 1 ]. Ensemble modelling approaches have become a cornerstone of RNA biology and engineering, used f...
biorxiv
10.64898/2026.04.21.720026
10.64898/2026.04.21.720026
1
Assessing the socio-economic value of sea turtles to the Maldives' tourism industry in 2022 (post-pandemic)
[ "Gervolino, J.", "Forster, O.", "Afeef, I.", "Rasheed, R. A.", "Hameed, A.", "Inan, I.", "Nashid, D.", "Petros, C.", "Lloyd, J. R.", "Köhnk, S." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.720026v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The exploitation of sea turtles for subsistence and commercial uses has been well-documented across tropical and subtropical coastal communities for millennia [ 1 – 3 ], and has played a major role in the h...
biorxiv
10.64898/2026.04.21.720023
10.64898/2026.04.21.720023
1
Genomic dialects: How amino acid properties and the second codon base shape the informational accents of life
[ "Martinez, O.", "Ochoa-Alejo, N." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.720023v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Codon Usage Bias (CUB) is measured on a numeric scale from zero to one. A value of zero indicates that all synonymous codons for a given amino acid ( aa ) appear with equal frequency within the CDSs of a ge...
biorxiv
10.64898/2026.04.21.719997
10.64898/2026.04.21.719997
1
C26 and CT26 colorectal cancer models exhibit divergent cachexia phenotypes, intramuscular inflammation, and protein turnover signaling
[ "Lu, X.", "Tlais, H.", "Rehman, H.", "Martens, A. N.", "Hartz, A. L.", "Figueiredo, V. C.", "Markworth, J. F." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719997v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Cancer cachexia is a multifactorial syndrome characterized by progressive loss of body weight, skeletal muscle mass, adipose tissue, and physical function ( 1 ). As the second leading cause of cancer-relate...
biorxiv
10.64898/2026.04.21.719991
10.64898/2026.04.21.719991
1
Linking neural representations to behavior using generalization
[ "Nunez-Ochoa, M. A.", "Du, F.", "Zhong, L.", "Baptista, S.", "Michaelos, M.", "Sohn, A.", "Baruchin, L.", "Schröder, S.", "Stringer, C.", "Pachitariu, M." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719991v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "One of the main goals of systems neuroscience is to understand the neural computations that give rise to animal behaviors. This requires multiple steps, such as identifying the brain regions involved, deter...
biorxiv
10.64898/2026.04.21.719973
10.64898/2026.04.21.719973
1
Transcriptomic Profiling of Thyroid Eye Disease Orbital Fibroblasts Identifies Sorafenib as a Novel Therapeutic
[ "Yuan, K.", "Truong, P.", "Patrick, C.", "Ushchak, E.", "Roztocil, E.", "Feldon, S. E.", "Woeller, C. F." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719973v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Thyroid eye disease (TED) is a debilitating autoimmune condition characterized by expansion of orbital adipose tissue and fibrosis of the extraocular muscles, leading to proptosis, diplopia, and vision loss...
biorxiv
10.64898/2026.04.21.719968
10.64898/2026.04.21.719968
2
Fluorescent non-canonical amino acid as a site-specific conformational probe of prion formation
[ "de Alcantara Ferreira, J.", "Walsh, D. J.", "Turnbaugh, E.", "Mills, J. H.", "Supattapone, S." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719968v2
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Prions are unconventional infectious agents that cause fatal neurological diseases, including Creutzfeldt-Jakob disease (CJD), bovine spongiform encephalopathy (BSE), and scrapie. Prion diseases can be eith...
biorxiv
10.64898/2026.04.21.719960
10.64898/2026.04.21.719960
1
Transcriptional regulators predicted to drive macrophage dysregulation during impaired wound healing in diabetic mice
[ "Lukas, B. E.", "Pang, J.", "Dai, Y.", "Koh, T. J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719960v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Chronic wounds associated with diabetes are an escalating problem around the world [ 1 ]. People suffering from diabetes incur a 25% lifetime risk of developing chronic wounds, and associated risk of amputa...
biorxiv
10.64898/2026.04.21.719959
10.64898/2026.04.21.719959
1
scConcept enables concept-level exploration of single-cell transcriptomic data
[ "Chen, H.", "Li, Y." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719959v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Gene expression profiling has been widely used to characterizing cells and tissues [ 1 ]. The rapid development of single-cell RNA sequencing (scRNA-seq) technologies has enabled researchers to resolve cell...
biorxiv
10.64898/2026.04.21.719951
10.64898/2026.04.21.719951
2
Raster photostimulation of large-scale neural populations
[ "LaFosse, P. K.", "Flickinger, D.", "Jaindl, G.", "Drinnenberg, A.", "Grodem, S.", "Lensjo, K. K.", "Ramakrishnan, C.", "Siverts, L.", "Zeng, H.", "Tasic, B.", "Daigle, T. L.", "Fyhn, M.", "Deisseroth, K. L.", "Stringer, C.", "Pachitariu, M." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719951v2
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Causal perturbations have played a key role in the study of neural computations, starting with lesion studies [ 1 ] and continuing with optogenetic approaches that have enabled precise targeting [ 2 – 7 ]. ...
biorxiv
10.64898/2026.04.21.719943
10.64898/2026.04.21.719943
1
Genetic compensation in β-actin mutants occurs independently of mutations that destabilize β-actin mRNA
[ "Saini, H.", "Zhang, J.", "Dardari, H.", "Moazed, D." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719943v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Genetic compensation refers to the ability of functionally redundant or paralogous genes to fully or partially compensate for each other’s loss ( 1 , 2 ). When a gene is disrupted, compensation can be achie...
biorxiv
10.64898/2026.04.21.719931
10.64898/2026.04.21.719931
1
PM2.5 toxin benzopyrene induces life-limiting inflammation and oxidative stress in the airway by up-regulation of TRPC6 and inactivation of β2AR/CFTR signaling
[ "Caohuy, H.", "Ognoon, M.", "Chen, T.", "Dib, T.", "Pollard, B. S.", "Fatima, N.", "Flagg, T.", "Soni, D. K.", "Biswas, R.", "Rittase, W.", "Lesperance, O. J.", "Juliano, S.", "Pollard, H. B." ]
CC0-1.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719931v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Exposure to high atmospheric levels of PM2.5 are associated with increased risks for inflammatory lung diseases, including asthma-like illnesses, c hronic o bstructive p ulmonary d isease (COPD), interstiti...
biorxiv
10.64898/2026.04.21.719876
10.64898/2026.04.21.719876
1
Probabilistic coupling of cellular and microenvironmental heterogeneity by masked self-supervised learning
[ "Kojima, Y.", "Tanaka, Y.", "Hirose, H.", "Chiwaki, F.", "Nishimura, K.", "Hayashi, S.", "Itahashi, K.", "Ishikawa, M.", "Shimamura, T.", "Mano, H." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719876v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Single-cell transcriptomics has revealed prevalent cellular heterogeneity across diverse biological systems, including disease states[ 1 ]. These data have enabled the reconstruction of developmental lineag...
biorxiv
10.64898/2026.04.21.719734
10.64898/2026.04.21.719734
1
Verticall: A fast and robust tool for recombination detection in large-scale bacterial genomic datasets
[ "Odih, E. E.", "Wick, R. R.", "Holt, K. E." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719734v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Phylogenomics is the field of reconstructing evolutionary histories using whole-genome sequence data [ 1 ]. The resulting phylogenies can then be used for a wide range of analyses, including taxonomic class...
biorxiv
10.64898/2026.04.21.719697
10.64898/2026.04.21.719697
1
Synovial transcriptional clusters link cartilage degeneration to cell-type-specific gene expression in knee osteoarthritis
[ "Mazzucco, M. R.", "Mehta, B.", "Ruiz-Ortiz, J.", "Hale, C.", "Omi, F.", "Singh, P.", "Yuan, R.", "Lessard, S.", "Song, E. K.", "Zhang, M.", "Younis, S.", "Robinson, W. H.", "Ramirez, D.", "DiCarlo, E.", "Wang, W.", "Carroll, T.", "Rodriguez, J.", "Sculco, P.", "Li, X.", "Wu, Y...
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719697v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Knee osteoarthritis (OA), characterized by cartilage degeneration, pain, and functional impairment, affects more than 20% of adults aged 40 years and older worldwide[ 1 ]. The combination of high population...
biorxiv
10.64898/2026.04.21.719679
10.64898/2026.04.21.719679
1
A human specific CCG repeat in the RBFOX1 promoter is implicated in speech and autism
[ "Lee, C.", "Davenport, M. H.", "Jarvis, E. D." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719679v1
2026-04-24T00:00:00
[ { "type": "para", "text": "Understanding the causal variants and molecular mechanisms underlying human-specific traits, such as language, is a central challenge in the new era of complete genome sequences. In the case of language, this trait is associated with specialized up- or down-regulation of 100s to 1...
biorxiv
10.64898/2026.04.21.719530
10.64898/2026.04.21.719530
1
Targeted medial prefrontal cortex stimulation prevents incubation of cocaine craving and restores functional connectivity
[ "Lu, H.", "Hoffman, S.", "Duan, Y.", "Ma, Z.", "Nguyen, H.", "Carney, A. F.", "Scott, T.", "Varlas, O.", "Haque, M. M.", "Stein, E. A.", "Xi, Z.-X.", "Shaham, Y.", "Yang, Y." ]
CC0-1.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719530v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Cocaine use remains a major public health concern, impacting an estimated 22 million people globally ( 1 ). In the United States, deaths from cocaine-related overdoses have increased more than fourfold over...
biorxiv
10.64898/2026.04.20.719540
10.64898/2026.04.20.719540
1
Integrating AI and molecular modeling for structural prediction of a closed state of the hERG channel
[ "Upex, C.", "Osborne, T.", "Biglino, G.", "Hancox, J.", "Corey, R. A." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.20.719540v1
2026-04-24T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The voltage-sensitive potassium (K + ) channel Kv11.1, also known as hERG1 (hereafter hERG), plays a critical role in the repolarisation phase of the cardiac action potential by mediating the rapid componen...
biorxiv
10.64898/2026.04.18.719399
10.64898/2026.04.18.719399
3
Failure to classically condition planarian flatworms
[ "Kelso, Z. S.", "Snyder, M. C.", "Gershman, S. J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.18.719399v3
2026-04-20T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Evolutionary and comparative neuroscience suggest that planarian nervous systems represent the most basal, Urbilaterian-like brains of any contemporary organism [ 1 – 4 ]. Consequently, planarians offer a w...
biorxiv
10.64898/2026.04.17.718988
10.64898/2026.04.17.718988
2
Ancestra: A lineage-explicit simulator for benchmarking B-cell receptor repertoire and lineage inference methods
[ "Hassanzadeh, R.", "Abdollahi, N.", "Kossida, S.", "Giudicelli, V.", "Eslahchi, C." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.17.718988v2
2026-04-21T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Advances in high-throughput immune repertoire sequencing (AIRR-seq) have enabled detailed characterization of B-cell receptor (BCR) repertoires across diverse biological and clinical contexts, including vac...
biorxiv
10.64898/2026.04.16.718586
10.64898/2026.04.16.718586
2
Metatranscriptome data support the existence of two distinct morphotypes in a single parmalean species in natural environments
[ "Sasaki, H.", "Endo, H.", "Pelletier, E.", "Yoshikawa, S.", "Kuwata, A.", "Ogata, H." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.16.718586v2
2026-04-17T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Diatoms are one of the most ecologically successful groups of phytoplankton, accounting for approximately 20% of primary production in modern oceans ( Armbrust, 2009 ). However, the drivers of their ecologi...
biorxiv
10.64898/2026.04.13.718277
10.64898/2026.04.13.718277
2
NPP-21/TPR is required for developmental control of spindle checkpoint strength in C. elegans
[ "Gallagher, N.", "Brown, S.", "Duprat, V.", "Köhler, S.", "Dernburg, A. F.", "Bhalla, N." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.13.718277v2
2026-04-15T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The spindle checkpoint is a cell cycle surveillance mechanism that ensures that chromosomes are attached to the mitotic or meiotic spindle to guarantee accurate chromosome segregation and prevent aneuploidy...
biorxiv
10.64898/2026.04.05.716628
10.64898/2026.04.05.716628
2
Single-section multiplexed imaging enables comprehensive lung cancer diagnosis
[ "Ben-uri, R.", "Keidar Haran, T.", "Bussi, Y.", "Vainer, G.", "Arnon, J.", "Pillar, N.", "Bahlai, S.", "Sourikh, H.", "Fuchs, I.", "Elhanani, O.", "Neuman, T.", "Pikarsky, E.", "Keren, L." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.05.716628v2
2026-04-08T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Lung cancer is the leading cause of cancer-related mortality worldwide, with approximately 2.5 million new cases and over 1.8 million deaths reported annually 1 . However, therapeutic advances over the past...
biorxiv
10.64898/2026.03.27.714601
10.64898/2026.03.27.714601
2
The limits of scaling in aggregation-driven patterning of cell collectives
[ "Zhao, M. L.", "Rombouts, J.", "Stokkermans, A.", "Erzberger, A.", "Aulehla, A." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.03.27.714601v2
2026-03-30T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "How cell fate patterns change with the size of multicellular systems is a fundamental question. Developing embryos exhibit the remarkable ability to scale cell fate patterns with overall system size [ 1 – 5...
biorxiv
10.64898/2026.03.26.714426
10.64898/2026.03.26.714426
2
Distinct effects of sensory and genetic risk factors for psychosis on auditory cortical temporal acuity in a mouse model of 22q11.2 Deletion Syndrome
[ "Lu, C.", "Linden, J. F." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.03.26.714426v2
2026-03-26T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Clinical studies have shown that psychosis impairs auditory processing, including frequency discrimination, spatial localization, deviant detection, and prepulse inhibition ( 1 ). In addition, patients with...
biorxiv
10.64898/2026.03.19.712999
10.64898/2026.03.19.712999
2
Chromatin priming and co-factor availability shape lineage response to the neuronal pioneer factor ASCL1 in pluripotency
[ "Lundie-Brown, J.", "Drummond, R.", "Ng-Blichfeldt, J.-P.", "Azzarelli, R.", "Philpott, A." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.03.19.712999v2
2026-03-23T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Development requires precise control over the generation of diverse cell types. Achieving the correct spatial and temporal coordination of growth, differentiation, and morphogenesis requires cells to regula...
biorxiv
10.64898/2026.03.18.712438
10.64898/2026.03.18.712438
2
Maintenance cost of photosynthesis sets key ecological constraints on zooxanthellate corals
[ "Gomez-Campo, K.", "Martinez-Rugerio, M. I.", "Gomez Reali, M. A.", "Gonzalez-Pech, R. A.", "Santiago-Martinez, M. G.", "Turnham, K. E.", "LaJeunesse, T. C.", "Baums, I. B.", "Enriquez, S.", "Iglesias-Prieto, R." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.03.18.712438v2
2026-03-20T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Light supplies the energy that sustains coral reef ecosystems, but its role in shaping coral distribution cannot be explained by light availability alone. Variation in light quantity and spectral compositio...
biorxiv
10.64898/2026.02.25.707869
10.64898/2026.02.25.707869
2
Gene-First Identity Construction for Robust Cell Identification in Single-Cell Transcriptomics
[ "Yang, L.", "Huang, Z.", "Cai, J.", "Xin, H." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.02.25.707869v2
2026-02-26T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "In the era of large-scale single-cell atlases, accurate and stable cell-type definition has become a central challenge in computational biology[ 1 , 2 ]. Projects such as the Human Cell Atlas[ 3 ], Tabula S...
biorxiv
10.64898/2026.01.22.701099
10.64898/2026.01.22.701099
3
MetaTree: an interactive web platform for aligned hierarchical data visualization and multi-group comparison
[ "Wu, Q.", "Zhang, A.", "Ning, Z.", "Figeys, D." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.01.22.701099v3
2026-01-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Background" }, { "type": "para", "text": "Many biological datasets, including taxonomic hierarchies and functional classification systems [ 1 - 3 ], are organized across multiple levels. In microbiome workflows such as 16S rRNA sequencing [ 4 ], shot...
biorxiv
10.64898/2026.01.21.700902
10.64898/2026.01.21.700902
2
Lupus Immune Complexes Drive Distinct Pro-Inflammatory Monocyte and Macrophage Populations Independent of Type I Interferon
[ "Osmani, L.", "Shin, M.", "Lee, S. J.", "Cai, H.", "Seong, W. J.", "Kim, H.", "Yoo, J.", "Kim, M.", "Bracamonte, W.", "Felix, M.", "Ahn, J. G.", "Park, H.-J.", "Shin, J. J.", "Unlu, S.", "Par-Young, J.", "Doherty, E.", "Chen, J.", "Dong, M. X.", "Koumpouras, F.", "Gomez, J. L."...
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.01.21.700902v2
2026-01-22T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Systemic lupus erythematosus (SLE or lupus) is a multi-systemic autoimmune-mediated inflammatory disease of unknown etiology involving multiple organs. The pathologic features of SLE are thought to involve ...
biorxiv
10.1101/2025.11.28.691195
10.1101/2025.11.28.691195
3
Adapting Co-Folding Models for Structure-Based Protein-Protein Docking Through Flow Matching
[ "Xu, D.", "Chu, L.-S.", "Gray, J. J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.1101/2025.11.28.691195v3
2025-12-01T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Protein-protein interactions mediate critical processes in all forms of life, and the accurate prediction of the three-dimensional details of such interactions can provide significant insights into many bio...
biorxiv
10.1101/2025.11.13.688255
10.1101/2025.11.13.688255
3
Regional adaptation to mosquito vectors shapes Plasmodium falciparum populations
[ "Loesbanluechai, D.", "Sollelis, L.", "Armstrong, M.", "Menezes, I.", "Cox, A.", "Divala, L. B. T.", "Lawson, A.", "Pradhan, S.", "Ubiaru, P. C.", "Pallikara, A.", "Armstrong, D.", "Parker, G.", "Lee, C.", "Pearson, R. D.", "Stokes, B. H.", "Ranford-Cartwright, L. C.", "Marti, M.", ...
CC-BY-4.0
https://www.biorxiv.org/content/10.1101/2025.11.13.688255v3
2025-11-13T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Malaria remains one of the world’s most devastating infectious diseases, causing more than 500,000 deaths each year [ 1 ]. The disease is caused by Plasmodium parasites transmitted through the bites of Anop...
biorxiv
10.1101/2025.10.14.682310
10.1101/2025.10.14.682310
4
Quantitative genetics of lifetime growth curves in a lizard
[ "Aragon, A.", "Rutschmann, A.", "Richard, M.", "Bestion, E.", "Pellerin, F.", "Winandy, L.", "San-Jose, L. M.", "Di Gesu, L.", "Darnet, E.", "Cribellier, J.", "Massot, M.", "Clobert, J.", "Cote, J.", "de Villemereuil, P." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.1101/2025.10.14.682310v4
2025-10-15T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The body size of individuals impacts a large variety of their biology, from their ecology to their physiology ( LaBarbera, 1989 ). One particular aspect of body size, for most species, is that it is general...
biorxiv
10.1101/2025.09.24.678246
10.1101/2025.09.24.678246
2
Validating Conditionally Essential Targets: Discovery of the First Orally Effective Biotin Inhibitor against MycobacteriumTuberculosis
[ "Liu, Q.", "Wallach, J. B.", "Jayasinghe, Y. P.", "Sullivan, M. R.", "Proietto, J.", "Rodriguez, S.", "Vo, S.", "Boshoff, H. I. M.", "Jia, Z.", "Ostrer, L.", "Mehdiratta, K.", "Shi, R.", "Dartois, V.", "Baughn, A. D.", "Rubin, E. J.", "Ronning, D. R.", "Zimmerman, M. D.", "Schnappi...
CC-BY-4.0
https://www.biorxiv.org/content/10.1101/2025.09.24.678246v2
2025-09-24T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Antimicrobial resistance (AMR) is a rapidly intensifying global health crisis, fueled by overuse of antibiotics, incomplete treatment, environmental contamination, and inadequate sanitation 1 . The 2024 WHO...
biorxiv
10.1101/2025.07.02.662782
10.1101/2025.07.02.662782
3
Tracking West Nile virus dynamics using viral loads from trapped mosquitoes
[ "Alahakoon, P.", "Marchinton, I.", "Koch, R.", "Fauver, J. R.", "Hay, J. A." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.1101/2025.07.02.662782v3
2025-07-05T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "West Nile disease is a vector-borne disease caused by West Nile virus (WNV) infection [ 1 ]. It is maintained in an enzootic cycle between mosquitoes and birds [ 1 , 2 ], with humans as incidental hosts [ 3...
biorxiv
10.1101/2024.07.15.603538
10.1101/2024.07.15.603538
3
Modeling causal signal propagation in multi-omic factor space with COSMOS
[ "Dugourd, A.", "Lafrenz, P.", "Mananes, D.", "Paton, V.", "Fallegger, R.", "Bai, Y.", "Kroger, A.-C.", "Turei, D.", "Li, Y.", "Trogdon, M.", "Nager, D.", "Deng, S.", "Shen, C.", "Lapek, J. D.", "Shtylla, B.", "Saez-Rodriguez, J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.1101/2024.07.15.603538v3
2024-07-17T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Many diseases are the result of complex deregulations of several interconnected biological mechanisms that span over cell-cell communication mediated by ligands and receptors, intracellular signaling, gene ...
biorxiv
10.64898/2026.04.23.720446
10.64898/2026.04.23.720446
1
Linked origins but distinct roles for extreme length and sequence variation at a tandem repeat in CACNA1C
[ "Song, J.", "Zhao, V.", "Grant, R. L.", "Kingsley, D. M." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.23.720446v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Tandem repeats have been implicated in a wide range of diseases, including Huntington disease, spinocerebellar ataxia, and epilepsy, and likely contribute to undetected variation and missing heritability fo...
biorxiv
10.64898/2026.04.23.720375
10.64898/2026.04.23.720375
1
Universal Geometry of Compositional Construction in Prefrontal Cortex
[ "Manakov, M.", "Proskurin, M.", "Wang, H.", "Kuleshova, E.", "Lustig, A.", "Behnam, R.", "Druckmann, S.", "Tervo, D. G. R.", "Koay, S. A.", "Karpova, A. Y." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.23.720375v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The ability to systematically construct new, complex behaviors or ideas from simpler parts is a hallmark of intelligence. A longstanding proposal is that composition provides a simple and general mechanism ...
biorxiv
10.64898/2026.04.23.720354
10.64898/2026.04.23.720354
1
A metagenomic framework for rapid Listeria monocytogenes surveillance in food production environments
[ "Muchaamba, F.", "Reska, T.", "Biggel, M.", "Locken, K. M.", "Weilguny, L.", "Corti, S.", "Kelbert, L.", "Roger, S.", "Urban, L." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.23.720354v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Listeria monocytogenes remains one of the most consequential foodborne pathogens, responsible for severe invasive disease and disproportionately high mortality (European Food Safety Authority (EFSA) and Eur...
biorxiv
10.64898/2026.04.23.720330
10.64898/2026.04.23.720330
2
Visual cortical dynamics supporting predictable attentional capture
[ "Groot, J. J.", "Schall, J. D.", "Westerberg, J. A." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.23.720330v2
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Our senses continuously sample a broad range of rich sensory information. Yet, the brain’s limited processing capacity prevents it from scrutinizing every input. As such, efficient interaction with the envi...
biorxiv
10.64898/2026.04.23.720320
10.64898/2026.04.23.720320
1
Dynamic construction of subjective time through statistical learning of event structure
[ "Zeng, Q.", "Trübutschek, D.", "Turk-Browne, N. B.", "Melloni, L." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.23.720320v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "When listening to a language we do not understand, speech can feel strikingly fast. Once that same language becomes familiar, the very same acoustic input appears to slow down. Crucially, this shift occurs ...
biorxiv
10.64898/2026.04.23.720313
10.64898/2026.04.23.720313
1
Brain2VLM: Hierarchical Alignment Between Cortical Representations and Vision-Language Latent Spaces
[ "Pritam, N. A. A.", "O, J. S.", "Jain, S." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.23.720313v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Understanding how the human brain represents and reconstructs visual experience remains a central challenge in NeuroAI. Brain decoding aims to recover sensory stimuli from non-invasive brain recordings such...
biorxiv
10.64898/2026.04.23.720151
10.64898/2026.04.23.720151
1
A liquid handling platform for standardised quantification of cell-free enzymatic activity encoded by antimicrobial resistance genes
[ "Bergum, M.", "Martin, B.", "Sutton, J. M.", "Moore, S. J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.23.720151v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Antimicrobial resistance (AMR) is a global concern to human health, contributing to millions of deaths each year. 1 Bacteria can acquire novel AMR through intrinsic genetic changes, including chromosomal mu...
biorxiv
10.64898/2026.04.22.720271
10.64898/2026.04.22.720271
1
Revisiting phage-host inference from metagenome-assembled genomes reveals the need for scaffold-level validation
[ "Yuan, L.", "Anantharaman, K.", "Ma, B.", "Camargo, A. P.", "Chen, L." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.720271v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Viruses are the most abundant biological entities on Earth and have been recognized as integral components of ecosystems across the planet 1 – 3 . Viruses that exclusively infect bacteria are known as bacte...
biorxiv
10.64898/2026.04.22.720243
10.64898/2026.04.22.720243
1
Analysis of Flurothyl-induced Seizures and Epileptogenesis in Mice with Targeted Deletions of Exons 3 and 4 in Dock7
[ "Ferland, R. J.", "Lizotte, T.", "Becker, K. A." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.720243v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Epilepsy affects approximately 1.2% of the U.S. population, making it one of the most prevalent neurological conditions ( 1 ). Current anti-epileptic treatments focus on suppressing seizures, but do not tar...
biorxiv
10.64898/2026.04.22.720242
10.64898/2026.04.22.720242
1
Genome quality variation across Scyphozoa and the comparative distribution of retinoid- and AhR-related gene families.
[ "Park, Y.-J.", "Lee, N.", "JO, Y.", "Yum, S.", "Kwon, K. K." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.720242v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Scyphozoa exhibit a complex life cycle that alternates between sessile and pelagic stages, including polyp, strobila, ephyra, and medusa stages [ 1 ]. A key developmental transition in this cycle is strobil...
biorxiv
10.64898/2026.04.22.720190
10.64898/2026.04.22.720190
1
Two mammalian-like cysteine dioxygenases and a sulfite exporter play important roles in sulfur homeostasis and virulence of a human pathogen
[ "Saha, A.", "Petrackova, D.", "Holubova, J.", "Vecerek, B." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.720190v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Sulfur is one of the essential nutrients required by cells for growth. In most cells, sulfur is incorporated into sulfur-containing amino acids cysteine and methionine, cofactors such as thiamine and biotin...
biorxiv
10.64898/2026.04.22.720187
10.64898/2026.04.22.720187
2
Hierarchical Breakdown of RNA Structure Prediction in CASP16: From Reliable Local Features to Speculative Multimer Assembly
[ "Nithin, C.", "Pilla, S. P.", "Kmiecik, S." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.720187v2
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The functional diversity of RNA molecules, extending from their canonical roles in the central dogma to complex regulatory and catalytic activities, is intimately linked to their ability to fold into specif...
biorxiv
10.64898/2026.04.22.720137
10.64898/2026.04.22.720137
1
Boreal and subarctic freshwaters harbour a diversity of jumbophages
[ "Niemi, M.", "Karneyeva, K.", "Sundberg, L.-R.", "Oksanen, H. M.", "Laanto, E." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.720137v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The boreal biome, the world’s largest terrestrial biome, contains extensive networks of lakes, rivers, and wetlands that support diverse microbial communities adapted to cold, nutrient-poor, and humic-rich ...
biorxiv
10.64898/2026.04.22.720114
10.64898/2026.04.22.720114
1
CurT dosage quantitatively affects thylakoid structure and PSII performance in Synechocystis sp. PCC 6803
[ "Ostermeier, M.", "Pohland, A.-C.", "Dann, M." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.720114v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Cyanobacteria are one of the most ancient and taxonomically diverse bacterial clades defined by their capacity for oxygenic photosynthesis ( Garcia-Pichel et al., 2020 ), relying on the tandem operation of ...
biorxiv
10.64898/2026.04.22.720112
10.64898/2026.04.22.720112
1
Proximity proteomics reveals a role for IFI16 during human coronavirus infection
[ "Languon, S.", "Bailey, I.", "Sorensen, M.", "Miller, Z. D.", "Sha, J.", "Dearborn, J.", "Dowell, W.", "Kirch, T.", "Wohlschlegel, J.", "MAJUMDAR, D." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.720112v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Coronaviruses are enveloped, positive-sense single-stranded RNA viruses that are classified under the family Coronaviridae which consist of four genera Alpha-, Beta-, Gamma- , and Deltacoronavirus . While A...
biorxiv
10.64898/2026.04.22.718605
10.64898/2026.04.22.718605
1
Ocean acidification alters hypoxia sensitivity and oxyregulation in reef-building corals
[ "van der Zande, R. M.", "Johnson, K. W.", "Littke, S.", "Schoepf, V." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.22.718605v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Ocean deoxygenation and the emergence of dead zones are becoming increasingly prevalent and damaging to coastal marine ecosystems globally 1 – 3 . Its effects likely already surpass those of ocean warming a...
biorxiv
10.64898/2026.04.21.720022
10.64898/2026.04.21.720022
1
Altitude-mediated niche partitioning between Dacus bivittatus and Dacus punctatifrons along an elevational transect in the Uluguru Mountains, Tanzania
[ "Mwatawala, M. W.", "Ruboha, J. O.", "Bakengesa, J.", "Zinga, M. K.", "De Meyer, M." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.720022v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Fruit flies (Diptera: Tephritidae) are among the most important pests of horticultural crops worldwide because larval feeding within fruits reduces yield and market quality and may trigger quarantine and tr...
biorxiv
10.64898/2026.04.21.720009
10.64898/2026.04.21.720009
1
Aligned recordings of neural spiking activity and licking behavior in thirsty mice
[ "Xu, Z.", "Hong, B.", "Li, L.", "Xie, T.", "Chen, Z.", "Yao, H.", "Zhang, T." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.720009v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Background and Summary" }, { "type": "para", "text": "Mice have gained increasing prominence in neuroscience and physiology research due to their well-defined genetics [ 1 ], controllable behaviors [ 2 ] and mature experimental toolkits [ 3 ]. For ex...
biorxiv
10.64898/2026.04.21.720000
10.64898/2026.04.21.720000
2
Entrenchment of germline amino-acid differences in antibody affinity maturation
[ "Harel, N.", "Sung, K.", "Dumm, W.", "Johnson, M. M.", "Rich, D.", "Fukuyama, J.", "Haddox, H. K.", "Matsen, F. A." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.720000v2
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Amino acid differences between homologous proteins can become entrenched: maintained by epistatic constraints such that each homolog disfavors substitutions toward the other’s state [ 1 ]. Previous studies ...
biorxiv
10.64898/2026.04.21.719942
10.64898/2026.04.21.719942
1
A modelling technique unifying four paradigms of metacommunity theory
[ "Shahin, S.", "G. Rossberg, A.", "D. O'Sullivan, J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719942v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Metacommunity theory provides a framework for understanding how species distributions arise from the interplay of local population dynamics and dispersal between spatially discrete habitat patches ( Leibold...
biorxiv
10.64898/2026.04.21.719933
10.64898/2026.04.21.719933
1
Contamination of Engram Coactivity Networks During Forgetting
[ "An, L.", "Yang, M.", "Wang, H." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719933v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Forgetting is an essential activity-dependent process that underpins the efficiency of the learning and memory system ( 1 - 3 ). In a dynamic environment where not all information is equally relevant, the a...
biorxiv
10.64898/2026.04.21.719921
10.64898/2026.04.21.719921
1
Reflectance spectra capture temporal variation in functional traits and leaf phenology
[ "Nichodemus, C. O.", "Meireles, J. E." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719921v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Plant functional traits — measurable characteristics that underlie how plants interact with and respond to their environment ( Violle et al ., 2007 ) — provide an integrative framework for understanding fit...
biorxiv
10.64898/2026.04.21.719900
10.64898/2026.04.21.719900
1
Growth costs of suboptimal protein allocation in nonlinear models of growing cells
[ "Szeliova, D.", "Liebermeister, W.", "Lercher, M.", "Dourado, H." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719900v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Proteins play a central role in determining microbial growth, in particular by composing the catalysts of biochemical reactions such as the transporters exchanging resources with the environment, internal e...
biorxiv
10.64898/2026.04.21.719899
10.64898/2026.04.21.719899
2
Pharmacologic AMPK Activation Extends Lifespan in C. elegans and Improves Aspects of Healthspan in Mice
[ "Altintas, O.", "Knufinke, M.", "Mann, C. G.", "Langston, P. K.", "Rabinowitz, J. D.", "Murphy, C. T.", "Ewald, C. Y.", "Mitchell, S. J.", "MacArthur, M. R." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719899v2
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Metabolic dysfunction is a key feature of aging and includes impaired nutrient sensing, altered mitochondrial function and loss of normal circadian rhythmicity in macronutrient utilization ( López-Otín et a...
biorxiv
10.64898/2026.04.21.719898
10.64898/2026.04.21.719898
1
Cryo-EM structure of MutL-activated MutH
[ "Ulloa, E. A.", "Lamers, M. H." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719898v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "The faithful replication of genetic information requires the correction of mispaired bases that occur during DNA synthesis. DNA mismatch repair (MMR) is a post-replicative pathway that recognises and correc...
biorxiv
10.64898/2026.04.21.719882
10.64898/2026.04.21.719882
1
Machine Learning Approach for Enumeration of Circulating Cells with Diffuse in vivo Flow Cytometry
[ "Emamifar, M.", "Lee, J.", "Pace, J. S.", "Bellini, C.", "Niedre, M." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719882v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Metastasis accounts for the majority of cancer-related deaths, and one of the main pathways of spread is via the peripheral blood (PB). As such, circulating tumor cells (CTCs) may serve as an important indi...
biorxiv
10.64898/2026.04.21.719881
10.64898/2026.04.21.719881
1
Structural basis of substrate recognition and conformational gating in the bacteriophage M15 metalloendopeptidase LysPH
[ "Pahwa, D.", "Pandey, S.", "Pandey, N.", "Kumar, K. A.", "Choudhary, P.", "Unni, A.", "Choudhary, I.", "Ashar, M.", "Omar, B. J.", "Uniyal, M.", "Rao, S.", "Sharma, A. K.", "Tomar, S.", "KUMAR, P." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719881v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The rise of multidrug-resistant bacteria is a major threat to global health, severely limiting the effectiveness of current antibiotic treatments. The ESKAPE pathogens include Pseudomonas aeruginosa, Acinet...
biorxiv
10.64898/2026.04.21.719877
10.64898/2026.04.21.719877
1
Generation of Pathway Signatures by Combining Normal Modes with Weighted Ensemble Simulations
[ "Bogetti, A. T.", "Banerjee, A.", "Dill, K.", "Bahar, I." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719877v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "As is often the case, there is no “absolute best” method for simulating biomolecules like proteins. Often, there is a sharp tradeoff between model detail and the time cost of the simulated data. Take for in...
biorxiv
10.64898/2026.04.21.719848
10.64898/2026.04.21.719848
1
Interleaved multi-magnification cryo-electron tomography bridges cellular and structural biology
[ "Watson, H.", "Garcia-Giner, V.", "Eisenstein, F.", "Grange, M." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719848v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "A holistic understanding of the molecular organisation within a biological system requires integration of structural information across multiple spatial scales, from atomic-level molecular interactions to t...
biorxiv
10.64898/2026.04.21.719847
10.64898/2026.04.21.719847
1
Attracting Cavities 3.0: Faster and More Versatile Molecular Docking for the SwissDock Webserver
[ "Roehrig, U. F.", "Mathieu-Bugnon, M.", "Zoete, V." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719847v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Molecular docking is a computational approach for predicting the most probable binding mode of a small molecule to a macromolecular target, most commonly a protein, but possibly also a DNA or RNA. Docking a...
biorxiv
10.64898/2026.04.21.719842
10.64898/2026.04.21.719842
1
Nuclear Pct1 couples phosphatidylcholine synthesis with membrane biogenesis
[ "Lysyganicz, P. K.", "Toprakcioglu, Z.", "Guo, J.", "Barbosa, A. D.", "Jenkins, B. J.", "Lim, K.", "Koulman, A.", "Knowles, T. P. J.", "Dymond, M. K.", "Savage, D. B.", "Siniossoglou, S." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719842v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Biological membranes are an essential component of life. Membranes define the boundaries of cells; compartmentalize biochemical machineries within organelles; and provide a scaffold for complex reactions to...
biorxiv
10.64898/2026.04.21.719831
10.64898/2026.04.21.719831
1
Species-specific responses of helminths to temperature and moisture: long-term and multi-scale analyses in a free-living rodent
[ "Olarewaju, A. E.", "Zawadzka-Pawlewska, U.", "Ayansola, V. I.", "Dunn, A.", "Rybinska, A.", "Bajer, A.", "Behnke, J.", "Alsarraf, M.", "Dwuznik-Szarek, D.", "Tołkacz, K.", "Grzybek, M.", "Behnke-Borowczyk, J.", "Kloch, A." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719831v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Parasite communities exhibit significant variation in their distribution and abundance across temporal and spatial scales, shaped by complex interactions among host-related, ecological, and environmental fa...
biorxiv
10.64898/2026.04.21.719819
10.64898/2026.04.21.719819
1
Environment-aware genomic prediction enhances the transferability of polygenic resistance to ash dieback in Fraxinus excelsior
[ "Meger, J.", "Ulaszewski, B.", "Burczyk, J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719819v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Tree diseases are increasingly recognized as major drivers of biodiversity loss, reduced productivity, and ecosystem disruption in forests worldwide ( Boyd et al., 2013 ; Fisher et al., 2012 ; Santini et al...
biorxiv
10.64898/2026.04.21.719818
10.64898/2026.04.21.719818
1
Pupil and Neural Dynamics Reveal Belief-Dependent Decision Making Under Ambiguity
[ "Qin, Y.", "Rungratsameetaweemana, N.", "Lauharatanahirun, N.", "Sajda, P." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719818v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Humans make decisions in situations where outcomes are unknown, and the probabilities of benefit and harm are incomplete or unknown. Such decisions shape behavior across many domains, including financial in...
biorxiv
10.64898/2026.04.21.719817
10.64898/2026.04.21.719817
1
Fine-scale behavioural dynamics separates adaptive sickness behaviour from injury and infection pathology
[ "V Cano, A.", "Newman, D.", "Monteith, K. M.", "Dakos, V.", "Vale, P. F." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719817v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Animals commonly exhibit coordinated changes in behaviour during infection, including reduced locomotion, altered feeding, increased sleep or rest, and changes in social interaction 1 – 4 . Collectively ter...
biorxiv
10.64898/2026.04.21.719816
10.64898/2026.04.21.719816
1
Back to BERT in 2026: ModernGENA as a Strong, Efficient Baseline for DNA Foundation Models
[ "Aspidova, A.", "Kuratov, Y.", "Shadskiy, A.", "Burtsev, M.", "Fishman, V." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719816v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "I ntroduction" }, { "type": "para", "text": "DNA encodes a vast amount of biologically meaningful information, including regulatory logic, evolutionary constraints, and functional signals, that we are still far from fully decoding. Deep learning offe...
biorxiv
10.64898/2026.04.21.719811
10.64898/2026.04.21.719811
1
An auxiliary protein tunes reductase activity in alkaloid biosynthesis
[ "Carr, S. C.", "Wu, S.", "Gase, K.", "Nakamura, Y.", "Kamileen, M. O.", "Kunert, M.", "Heinicke, s.", "Kang, M.", "Grabe, V.", "Caputi, L.", "O'Connor, S. E." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719811v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Monoterpene indole alkaloids are an important class of natural products produced by plant species in the order Gentianales, with over 3000 structurally distinct molecules reported ( 1 ). The medicinal value...
biorxiv
10.64898/2026.04.21.719810
10.64898/2026.04.21.719810
1
Towards Scaling-Up Three-Dimensional Habitat Structural Measurements with Multi-Sensor Remote Sensing
[ "Suter, S.", "Ah-Peng, C.", "Kabache, S.", "Seidel, D.", "Strasberg, D.", "Zemp, D. C." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719810v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Conservation efforts rely on standardised methods to monitor biodiversity changes across spatial scales. The Essential Biodiversity Variables (EBVs), provide a globally applicable framework for monitoring k...
biorxiv
10.64898/2026.04.21.719804
10.64898/2026.04.21.719804
1
Centromeric variation is shared across ploidy barriers in Alnus glutinosa agg.
[ "Gerchen, J. F.", "Mandak, B.", "Melnyk, M.", "Kolar, F." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719804v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Polyploidy, the presence of multiple genome copies as a result of whole-genome duplication, is common in plants ( Otto & Whitton 2000 ) and genomic analyses showed that polyploidy occurred in several common...
biorxiv
10.64898/2026.04.21.719799
10.64898/2026.04.21.719799
1
Predicting Valley Fever Outbreaks: Novel Mechanistic Models Incorporating Climate and Ecological Interactions
[ "Reckell, T.", "Sterner, B.", "Engelthaler, D.", "Jevtic, P." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719799v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Coccidioidomycosis (Valley fever) is an environmentally driven fungal disease transmitted via inhalation of airborne Coccidioides spores, whose incidence is tightly coupled to climatic, ecological, and soil...
biorxiv
10.64898/2026.04.21.719798
10.64898/2026.04.21.719798
1
Focal inbreeding and clonal transmission of Plasmodium vivax in pre-elimination Vietnam
[ "Ngwana-Joseph, G.", "Nguyen Thi Huong, B.", "Nguyen Thi Hong, N.", "Phelan, J. E.", "Campino, S.", "Nguyen Quang, T.", "Clark, T. G." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719798v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Vietnam, along with countries in and around the Greater Mekong Subregion (GMS), is actively pursuing elimination of Plasmodium vivax (P. vivax) , the leading cause of malaria in the country, by 2030[ 1 ]. B...
biorxiv
10.64898/2026.04.21.719794
10.64898/2026.04.21.719794
1
Dynamic Workforce Modulation and Foraging Efficiency in Eusocial Insect Colonies
[ "Campos, D.", "Cristin, J.", "Fernandez-Lopez, P.", "Bartumeus, F." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719794v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "Eusociality provides biological species with a fundamentally expanded repertoire of adaptive strategies, offering sub-stantial advantages in ecological and evolutionary contexts. This view is reinforced by ...
biorxiv
10.64898/2026.04.21.719793
10.64898/2026.04.21.719793
1
Natural Killer Cell Granule Protein (NKG7) promotes the development of vaccine-induced anti-fungal Th1 cells
[ "Wuthrich, M.", "Taira, C. L.", "dos Santos Dias, L.", "He, X.", "Lichtenberger, S.", "Klein, B." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719793v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "INTRODUCTION" }, { "type": "para", "text": "The role of IFNγ in antifungal resistance has been studied extensively. While IFNγ produced by CD4 + T cells promotes resistance to infection, too much IFNγ results in immunopathology and progressive infect...
biorxiv
10.64898/2026.04.21.719673
10.64898/2026.04.21.719673
1
Loss of phosphorylation sites required for β-arrestin recruitment in the calcium-sensing receptor cytoplasmic region may contribute to hypocalcemia
[ "Wyatt, R. A.", "Massalha, H.", "Gorvin, C. M." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719673v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "The class C GPCR, CaSR, is essential for maintaining calcium homeostasis by regulating parathyroid hormone release and urinary calcium excretion ( 1 ). Receptor activation elicits signaling predominantly by...
biorxiv
10.64898/2026.04.21.719669
10.64898/2026.04.21.719669
1
Layer-5 Pyramidal Cell tLTD Requires Astrocytic Ca2+ and CB1 Receptor Signaling
[ "Watanabe, A.", "Guo, C.", "Alageswaran, S.", "Sjostrom, P. J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719669v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Synaptic plasticity is considered a cornerstone of memory formation ( Bliss and Collingridge, 1993 ; Malenka and Bear, 2004 ; Nabavi et al., 2014 ) and a key mechanism in the developmental refinement of neu...
biorxiv
10.64898/2026.04.21.719633
10.64898/2026.04.21.719633
1
A new phased assembly of the Antarctic spiny plunderfish provides novel insights into the evolution of the notothenioid radiation.
[ "Martelossi, J.", "Krasheninnikova, K.", "Denton, A.", "Wood, J. M. D.", "Mathers, T.", "Durbin, R.", "Fong, N.", "Bentley, D. L.", "Clark, M. S.", "Bista, I." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719633v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Background" }, { "type": "para", "text": "The notothenioids are one of the most diverse and dominant fish groups in the Southern Ocean and a rare example of a well characterised marine flock species [ 1 ]. The clade is formed by approximately 140 spe...
biorxiv
10.64898/2026.04.21.719525
10.64898/2026.04.21.719525
1
Aiki-XP: leakage-controlled multimodal prediction of within-species relative protein expression at pan-bacterial scale
[ "Tien, H.", "Meda, R. S.", "Shastry, S.", "Mysore, V." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719525v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Protein expression is an essential feature of life, required for growth, maintenance, and repair [ 42 ]. Understanding how genetic information is converted into protein molecules is critical for understandi...
biorxiv
10.64898/2026.04.21.719147
10.64898/2026.04.21.719147
1
Development of species-specific real-time PCR assays for the identification of five European Rhinolophus bats.
[ "Wright, P.", "Palacios, M. B.", "Hargreaves, D.", "Kitching, T.", "Bücs, S.-L.", "Budinski, I.", "Bajic, B.", "Jere, C.", "Csösz, I.", "Harry, I. C.", "Etheridge, T.", "Mathews, F." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.719147v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Non-invasive genetic sampling is a critical tool in wildlife conservation as it can provide information on a species’ presence, population size or ecology without the need to disturb individuals. The detect...
biorxiv
10.64898/2026.04.21.718480
10.64898/2026.04.21.718480
1
TAR syndrome causal gene RBM8A is critical for embryonic bone development and proper Hedgehog signaling
[ "Mott, J.", "Pei, Z.", "Sun, J.", "Lee, C. H.", "Puri, T.", "Sachs, Z. M.", "Aviles Vargas, A.", "Blaha, N.", "Tong, M.", "Liu, A.", "Wang, Y.", "Kim, Y.", "Girirajan, S.", "Zhang, J.", "Mao, Y." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.21.718480v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Birth defects impacting skeletal and craniofacial development are among the most common congenital diseases, representing some of the urgent unmet medical needs across the world 1 . The prevalence of major ...
biorxiv
10.64898/2026.04.20.719776
10.64898/2026.04.20.719776
1
Cardiac-Detargeted MyoAAV Enables Systemic Nrl-Mediated Fast Myofiber Remodeling and Hypertrophy Across Multiple Skeletal Muscles
[ "Hitachi, K.", "Sadaki, S.", "Watanabe, M.", "Tsuji, R.", "Kubo, A.", "Yamasaki, Y.", "Kiyofuji, Y.", "Inui, M.", "Kudo, T.", "Suzuki, T.", "Takahashi, S.", "Tsuchida, K.", "Fujita, R." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.20.719776v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "Introduction" }, { "type": "para", "text": "Skeletal muscle is the most abundant tissue in the body and plays critical roles in locomotion, posture, thermogenesis, and metabolic homeostasis. In addition to these mechanical and metabolic functions, sk...
biorxiv
10.64898/2026.04.20.719753
10.64898/2026.04.20.719753
1
Proximity-Aware Graph Attention Networks for Spatially Resolved Cell-Cell Inference
[ "Dubois, L.", "Petrov, A.", "Jack, J." ]
CC-BY-4.0
https://www.biorxiv.org/content/10.64898/2026.04.20.719753v1
2026-04-23T00:00:00
[ { "type": "heading", "level": 1, "text": "I ntroduction" }, { "type": "para", "text": "Intercellular communication is the molecular backbone of tissue organization. Cells coordinate their behavior through a rich repertoire of secreted ligands, surface receptors, gap junctions, and extracellu...