pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7klc | H | L | 0 | A | protein | null | hiv-1 clade a bg505 gp120,hiv-1 clade a bg505 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/29/20 | Crystal structure of M4H2K1 Fab bound to HIV-1 BG505 gp120 core and to 17b Fab | MUS MUSCULUS; HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | mus musculus | mus musculus | human immunodeficiency virus 1 | Kumar, S., Wilson, I.A. | 4.3 | X-RAY DIFFRACTION | 0.334 | 0.302 | false | true | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
2atk | A | B | 0 | C | protein | null | voltage-gated potassium channel | IMMUNE SYSTEM/ION TRANSPORT | 08/25/05 | Structure of a mutant KcsA K+ channel | MUS MUSCULUS; STREPTOMYCES LIVIDANS | mus musculus | mus musculus | streptomyces lividans | Cordero-Morales, J.F., Cuello, L.G., Zhao, Y., Jogini, V., Chakrapani, S., Roux, B., Perozo, E. | 2.5 | X-RAY DIFFRACTION | 0.261 | 0.238 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
7mwx | A | B | 0 | C | protein | null | core protein precursor ee2 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/17/21 | Structure of the core ectodomain of the hepatitis C virus envelope glycoprotein 2 with tamarin CD81 | HEPACIVIRUS C; MUS MUSCULUS; SAGUINUS OEDIPUS | mus musculus | mus musculus | hepacivirus c | Kumar, A., Hossain, R.A., Yost, S.A., Bu, W., Wang, Y., Dearborn, A.D., Grakoui, A., Cohen, J.I., Marcotrigiano, J. | 3.32 | X-RAY DIFFRACTION | 0.283 | 0.239 | false | true | IGHV14 | IGKV8 | Kappa | null | null | null | null | null |
5cez | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 07/08/15 | Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with an early putative precursor of the PGT121 family at 3.0 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wilson, I.A., Garces, F. | 3.031 | X-RAY DIFFRACTION | 0.266 | 0.233 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
1v7n | K | O | 0 | Z | protein | null | thrombopoietin | IMMUNE SYSTEM/CYTOKINE | 12/18/03 | Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody TN1 Fab | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Feese, M.D., Tamada, T., Kato, Y., Maeda, Y., Hirose, M., Matsukura, Y., Shigematsu, H., Kato, T., Miyazaki, H., Kuroki, R. | 3.3 | X-RAY DIFFRACTION | 0.305 | 0.167 | false | true | IGHV6 | IGKV4 | Kappa | null | null | null | null | null |
6z6v | H | null | 0 | E | F | protein | protein | NA | NA | complement c1q subcomponent subunit b | complement c1q subcomponent subunit c | IMMUNE SYSTEM | 05/29/20 | Globular head of C1q in complex with the nanobody C1qNb75 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | homo sapiens | Laursen, N.S., Andersen, G.R. | 2.19 | X-RAY DIFFRACTION | 0.227 | 0.178 | false | true | IGHV1 | null | null | null | null | null | null | null |
7dc8 | E | D | 0 | F | protein | null | interleukin-6 receptor subunit alpha | IMMUNE SYSTEM | 10/23/20 | Crystal structure of Switch Ab Fab and hIL6R in complex with ATP | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Kadono, S., Fukami, T.A., Kawauchi, H., Torizawa, T., Mimoto, F. | 2.757 | X-RAY DIFFRACTION | 0.278 | 0.207 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6oz6 | F | null | 0 | B | protein | null | phospho-n-acetylmuramoyl-pentapeptide-transferase | MEMBRANE PROTEIN/TRANSFERASE | 05/15/19 | Crystal structure of MraY bound to 3'-hydroxymureidomycin A | LAMA GLAMA; AQUIFEX AEOLICUS (STRAIN VF5) | lama glama | null | aquifex aeolicus (strain vf5) | Mashalidis, E.H., Lee, S.Y. | 3.7 | X-RAY DIFFRACTION | 0.301 | 0.257 | false | true | IGHV1 | null | null | null | null | null | null | null |
6rpj | B | null | 0 | A | protein | null | cytotoxic t-lymphocyte protein 4 | IMMUNE SYSTEM | 05/14/19 | A Non-blocking anti-CTLA-4 Nanobody complexed with CTLA-4 | HOMO SAPIENS; CAMELUS BACTRIANUS | camelus bactrianus | null | homo sapiens | Gao, H., Zhou, A., Zhang, F. | 3.25 | X-RAY DIFFRACTION | 0.262 | 0.249 | false | true | IGHV1 | null | null | null | null | null | null | null |
6dn0 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 06/05/18 | Retrofitted antibodies with stabilizing mutations: Herceptin scFv mutant with VH K30D and VL S52D. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Langley, D.B., Roome, B., Christ, D. | 2.0 | X-RAY DIFFRACTION | 0.234 | 0.205 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2hvk | A | B | 0 | C | protein | null | voltage-gated potassium channel | Membrane Protein | 07/28/06 | crystal structure of the KcsA-Fab-TBA complex in high K+ | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Zhou, Y. | 1.9 | X-RAY DIFFRACTION | 0.245 | 0.228 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
1igy | B | A | 0 | null | null | null | null | IMMUNOGLOBULIN | 10/09/97 | STRUCTURE OF IMMUNOGLOBULIN | MUS MUSCULUS | mus musculus | mus musculus | null | Harris, L.J., McPherson, A. | 3.2 | X-RAY DIFFRACTION | 0.327 | 0.211 | false | false | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
4oly | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/25/14 | Crystal structure of antibody VRC07-G54R in complex with clade A/E 93TH057 HIV-1 gp120 core | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kwon, Y.D., Kwong, P.D. | 2.351 | X-RAY DIFFRACTION | 0.244 | 0.201 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
6ikm | H | h | 0 | null | null | null | null | ANTIMICROBIAL PROTEIN | 10/16/18 | Crystal structure of SpuE-Spermidine in complex with ScFv5 | PSEUDOMONAS AERUGINOSA; HOMO SAPIENS | pseudomonas aeruginosa | homo sapiens | null | Wu, D., Sun, X. | 3.398 | X-RAY DIFFRACTION | 0.268 | 0.228 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4odx | H | B | 0 | X | protein | null | 4e10 epitope scaffold t117 | IMMUNE SYSTEM | 01/10/14 | 4E10 germline encoded precursor no.7 in complex with epitope scaffold T117 | HOMO SAPIENS; ARTIFICIAL GENE | homo sapiens | homo sapiens | artificial gene | Finton, K.A.K. | 3.1 | X-RAY DIFFRACTION | 0.304 | 0.280 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -11.850005 | SPR | null | TBD |
6iyn | A | null | 8 | null | null | null | null | AFLATOXIN B1-BINDING PROTEIN | 12/17/18 | Solution structure of camelid nanobody Nb26 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., He, T., Zhu, J., Li, S.L., Hu, R., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6d0x | A | B | 0 | C | peptide | null | nanp3 | IMMUNE SYSTEM | 04/11/18 | Crystal structure of chimeric H.2140 / K.1210 Fab in complex with circumsporozoite protein NANP3 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Scally, S.W., Bosch, A., Imkeller, K., Wardemann, H., Julien, J.P. | 1.849 | X-RAY DIFFRACTION | 0.209 | 0.179 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6i8g | B | null | 0 | A | protein | null | protein eds1l | IMMUNE SYSTEM | 11/20/18 | Structure of the plant immune signaling node EDS1 (enhanced disease susceptibility 1) in complex with nanobody ENB73 | ARABIDOPSIS THALIANA; LAMA GLAMA | lama glama | null | arabidopsis thaliana | Niefind, K., Voss, M., Toelzer, C. | 2.344 | X-RAY DIFFRACTION | 0.222 | 0.194 | false | true | IGHV1 | null | null | null | null | null | null | null |
1hcv | A | null | 0 | null | null | null | null | IMMUNOGLOBULIN | 07/13/96 | LLAMA HEAVY CHAIN VARIABLE DOMAIN AGAINST ALPHA SUBUNIT OF HCG (HUMAN CHORIONIC GONADOTROPIN) | LAMA GLAMA | lama glama | null | null | Spinelli, S., Cambillau, C., Tegoni, M. | 1.85 | X-RAY DIFFRACTION | 0.218 | 0.171 | false | true | unknown | unknown | unknown | null | null | null | null | null |
6ww2 | H | L | 0 | R | protein | null | frizzled-5,soluble cytochrome b562 | MEMBRANE PROTEIN | 05/07/20 | Structure of human Frizzled5 by fiducial-assisted cryo-EM | HOMO SAPIENS; SYNTHETIC CONSTRUCT; ESCHERICHIA COLI | homo sapiens | homo sapiens | homo sapiens, escherichia coli | Tsutsumi, N., Jude, K.M., Gati, C., Garcia, K.C. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6olp | G | I | 0 | D | C | B | protein | protein | protein | NA | NA | NA | envelope glycoprotein gp41 | envelope glycoprotein gp120 | envelope glycoprotein gp41 | Viral Protein/IMMUNE SYSTEM | 04/16/19 | Full length HIV-1 Env AMC011 in complex with PGT151 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Rantalainen, K., Cottrell, C.A. | 4.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
1rzi | H | G | 0 | null | null | null | null | IMMUNE SYSTEM | 12/24/03 | Crystal structure of human anti-HIV-1 gp120-reactive antibody 47e fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D. | 2.9 | X-RAY DIFFRACTION | 0.321 | 0.233 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6a78 | I | M | 0 | B | protein | null | roundabout homolog 1 | IMMUNE SYSTEM | 07/02/18 | Crystal structure of the fifth immunoglobulin domain (Ig5) of human Robo1 in complex with the scFv fragment of murine monoclonal antibody B5209B | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Mizohata, E., Nakayama, T., Kado, Y., Inoue, T. | 2.1 | X-RAY DIFFRACTION | 0.285 | 0.239 | false | true | IGHV5 | IGKV12 | Kappa | null | null | null | null | null |
1mnu | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/30/99 | UNLIGANDED BACTERICIDAL ANTIBODY AGAINST NEISSERIA MENINGITIDIS | MUS MUSCULUS | mus musculus | mus musculus | null | Van Den Elsen, J., Vandeputte-Rutten, L., Kroon, J., Gros, P. | 2.5 | X-RAY DIFFRACTION | 0.270 | 0.231 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7nvo | N | null | 0 | E | protein | null | t-complex protein 1 subunit epsilon | CHAPERONE | 03/15/21 | Human TRiC complex in open state with nanobody bound | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Kelly, J.J., Chi, G., Bulawa, C., Paavilainen, V.O., Bountra, C., Huiskonen, J.T., Yue, W. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
2omn | null | B | 0 | null | null | null | null | Immune system | 01/22/07 | Bence Jones KWR Protein- Immunoglobulin Light Chain Dimer, P4(3)2(1)2 Crystal Form | HOMO SAPIENS | null | homo sapiens | null | Makino, D.L., Larson, S.B., McPherson, A. | 2.2 | X-RAY DIFFRACTION | 0.283 | 0.226 | false | false | null | IGLV2 | Lambda | null | null | null | null | null |
5mv4 | O | P | 0 | Q | peptide | null | synthetic peptide containing the citrullinated collagentype ii epitope cii616-639,collagen alpha-1(ii) chain,synthetic peptide containing the citrullinated collagen type ii epitope cii616- 639 | IMMUNE SYSTEM | 01/15/17 | ACC1 Fab fragment in complex with citrullinated CII616-639 epitope of collagen type II (ptm23) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Holmdahl, R., Ge, C. | 2.9 | X-RAY DIFFRACTION | 0.247 | 0.232 | false | false | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
2fx8 | J | N | 0 | R | peptide | null | fragment of hiv glycoprotein (gp41) | IMMUNE SYSTEM | 02/03/06 | Crystal structure of hiv-1 neutralizing human fab 4e10 in complex with an aib-induced peptide encompassing the 4e10 epitope on gp41 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Cardoso, R.M.F., Brunel, F.M., Ferguson, S., Burton, D.R., Dawson, P.E., Wilson, I.A. | 2.2 | X-RAY DIFFRACTION | 0.283 | 0.235 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -8.89 | SPR | null | 17125793 |
7x6o | J | L | 0 | H | F | protein | protein | NA | NA | hemagglutinin | hemagglutinin | VIRAL PROTEIN | 03/07/22 | Cryo-EM structure of H1 hemagglutinin from A/Washington/05/2011 in complex with a neutralizing antibody 28-12 | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Cong, Y., Liu, C.X. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5cp7 | F | G | 0 | null | null | null | null | IMMUNE SYSTEM | 07/21/15 | Crystal Structure of an Antigen-Binding Fragment of Monoclonal Antibody against Sulfonamides | MUS MUSCULUS | mus musculus | mus musculus | null | Wang, Z., Shen, J., Li, C., Li, Y., Wen, K., Yu, X., Zhang, X. | 3.01 | X-RAY DIFFRACTION | 0.302 | 0.260 | false | false | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6o26 | A | B | 0 | C | peptide | null | circumsporozoite protein | IMMUNE SYSTEM | 02/22/19 | Crystal structure of 3246 Fab in complex with circumsporozoite protein NANA | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Scally, S.W., Bosch, A., Castro, K., Murugan, R., Wardemann, H., Julien, J.P. | 1.8 | X-RAY DIFFRACTION | 0.207 | 0.163 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3vga | C | B | 0 | A | protein | null | adenosine receptor a2a | SIGNALING PROTEIN | 08/04/11 | Crystal structure of human adenosine A2A receptor with an allosteric inverse-agonist antibody at 3.1 A resolution | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Hino, T., Arakawa, T., Iwanari, H., Yurugi-Kobayashi, T., Ikeda-Suno, C., Nakada-Nakura, Y., Kusano-Arai, O., Weyand, S., Shimamura, T., Nomura, N., Cameron, A.D., Kobayashi, T., Hamakubo, T., Iwata, S., Murata, T. | 3.1 | X-RAY DIFFRACTION | 0.263 | 0.196 | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
1mcs | null | A | 0 | P | peptide | null | peptide n-acetyl-l-gln-d-phe-l-his-d-pro-oh | IMMUNOGLOBULIN | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | HOMO SAPIENS | null | homo sapiens | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
2kqm | null | A | 3 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
7rso | I | K | 0 | D | protein | null | amc016 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/11/21 | AMC016 SOSIP.v4.2 in complex with PGV04 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Bader, D.L.V., Cottrell, C.A., Ward, A.B. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
6bzu | G | H | 0 | L | peptide | null | e2 as412 peptide | IMMUNE SYSTEM | 12/26/17 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody 19B3 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | hepatitis c virus | Tzarum, N., Alemn, F., Kong, L., Wilson, I.A., Law, M. | 2.7 | X-RAY DIFFRACTION | 0.290 | 0.265 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6pe9 | E | F | 0 | U | I | protein | protein | NA | NA | tumor necrosis factor receptor superfamily member 5 | tumor necrosis factor receptor superfamily member 5 | IMMUNE SYSTEM | 06/20/19 | Crystal Structure of CD40 complexed to FAB516 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Argiriadi, M.A. | 3.13 | X-RAY DIFFRACTION | 0.255 | 0.216 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
1bbj | B | A | 0 | null | null | null | null | IMMUNOGLOBULIN | 04/30/92 | CRYSTAL STRUCTURE OF A CHIMERIC FAB' FRAGMENT OF AN ANTIBODY BINDING TUMOUR CELLS | HOMO SAPIENS | null | homo sapiens | null | Brady, R.L., Hubbard, R.E., Todd, R.J. | 3.1 | X-RAY DIFFRACTION | unknown | unknown | false | true | unknown | unknown | unknown | null | null | null | null | null |
6niu | I | J | 0 | A | protein | null | envelope protein e | Viral protein/IMMUNE SYSTEM | 12/31/18 | Crystal structure of a human anti-ZIKV-DENV neutralizing antibody MZ4 in complex with ZIKV E glycoprotein | HOMO SAPIENS; ZIKA VIRUS (ISOLATE ZIKV/HUMAN/FRENCH POLYNESIA/10087PF/2013) | homo sapiens | homo sapiens | zika virus (isolate zikv/human/frenchpolynesia/10087pf/2013) | Sankhala, R.S., Dussupt, V., Donofrio, G., Choe, M., Modjarrad, K., Michael, N.L., Krebs, S.J., Joyce, M.G. | 4.303 | X-RAY DIFFRACTION | 0.359 | 0.264 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
7ew0 | E | e | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 05/24/21 | Cryo-EM structure of ozanimod -bound Sphingosine-1-phosphate receptor 1 in complex with Gi protein | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | homo sapiens | Yuan, Y., Jia, G.W., Su, Z.M., Shao, Z.H. | 3.42 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
1p7k | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 05/02/03 | Crystal structure of an anti-ssDNA antigen-binding fragment (Fab) bound to 4-(2-Hydroxyethyl)piperazine-1-ethanesulfonic acid (HEPES) | MUS MUSCULUS | mus musculus | mus musculus | null | Schuermann, J.P., Henzl, M.T., Deutscher, S.L., Tanner, J.J. | 1.75 | X-RAY DIFFRACTION | 0.230 | 0.197 | false | true | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
7pgb | m | n | 0 | l | protein | null | unknown | MEMBRANE PROTEIN | 08/13/21 | NaV_Ae1/Sp1CTD_pore-SAT09 complex | HOMO SAPIENS; ALKALILIMNICOLA EHRLICHII (STRAIN ATCC BAA-1101 / DSM 17681 / MLHE-1); RUEGERIA POMEROYI (STRAIN ATCC 700808 / DSM 15171 / DSS-3) | homo sapiens | homo sapiens | alkalilimnicola ehrlichii (strain atcc baa-1101/ dsm 17681 / mlhe-1), ruegeria pomeroyi (strain atcc 700808 / dsm 15171 / dss-3) | Lolicato, M., Arrigoni, C. | 3.6 | X-RAY DIFFRACTION | 0.232 | 0.207 | false | false | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6o3u | B | A | 0 | F | Hapten | 44E | (2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate | IMMUNE SYSTEM | 02/27/19 | Crystal structure of the Fab fragment of the human HIV-1 neutralizing antibody PGZL1.H4K3 in complex with 06:0 PA | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Irimia, A., Wilson, I.A. | 3.105 | X-RAY DIFFRACTION | 0.228 | 0.186 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4g6a | C | D | 0 | B | peptide | null | e2 peptide | IMMUNE SYSTEM | 07/18/12 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody AP33 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | hepatitis c virus | Kong, L., Wilson, I.A., Law, M. | 2.501 | X-RAY DIFFRACTION | 0.220 | 0.178 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6mts | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 10/21/18 | Crystal structure of VRC43.03 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kwon, Y.D., Druz, A., Law, W.H., Peng, D., Doria-Rose, N.A., Kwong, P.D. | 2.437 | X-RAY DIFFRACTION | 0.268 | 0.242 | false | true | IGHV4 | IGLV7 | Lambda | null | null | null | null | null |
7l02 | M | K | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/10/20 | Cryo-EM structure of SARS-CoV-2 2P S ectodomain bound to one copy of domain-swapped antibody 2G12 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Manne, K., Henderson, R., Acharya, P. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
2w60 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 12/16/08 | Anti citrullinated Collagen type 2 antibody acc4 | MUS MUSCULUS | mus musculus | mus musculus | null | Uysal, H., Bockermann, R., Nandakumar, K.S., Sehnert, B., Bajtner, E., Engstrom, A., Serre, G., Burkhardt, H., Thunnissen, M.M.G.M., Holmdahl, R. | 1.5 | X-RAY DIFFRACTION | 0.220 | 0.169 | false | false | IGHV9 | IGKV1 | Kappa | null | null | null | null | null |
3b5g | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 10/25/07 | Crystal Structure of the Unstable and Highly Fibrillogenic PRO7SER Mutant of the Recombinant Variable Domain 6AJL2 | HOMO SAPIENS | null | homo sapiens | null | Hernandez-Santoyo, A., Rodriguez-Romero, A. | 1.9 | X-RAY DIFFRACTION | 0.210 | 0.164 | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
7p5w | I | null | 0 | C | protein | null | volume-regulated anion channel subunit lrrc8a | MEMBRANE PROTEIN | 07/15/21 | Structure of homomeric LRRC8A Volume-Regulated Anion Channel in complex with synthetic nanobody Sb2 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | synthetic construct | null | mus musculus | Deneka, D., Rutz, S., Sawicka, M. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4nc1 | E | null | 0 | A | protein | null | cell wall-binding repeat protein | IMMUNE SYSTEM | 10/23/13 | Crystal Structure of TcdA-A2 Bound to A20.1 VHH and A26.8 VHH | CLOSTRIDIUM DIFFICILE; LAMA GLAMA | lama glama | null | clostridium difficile | Murase, T., Eugenio, L., Schorr, M., Hussack, G., Tanha, J., Kitova, E.N., Klassen, J.S., Ng, K.K.S. | 2.61 | X-RAY DIFFRACTION | 0.252 | 0.202 | false | true | IGHV1 | null | null | null | null | null | null | null |
7a3q | H | L | 0 | A | protein | null | envelope protein e | VIRAL PROTEIN | 08/18/20 | Crystal structure of dengue 4 virus envelope glycoprotein in complex with the scFv fragment of the broadly neutralizing human antibody EDE1 C10 | DENGUE VIRUS 4; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 4 | Sharma, A., Vaney, M.C., Guardado-Calvo, P., Duquerroy, S., Rouvinski, A., Rey, F.A. | 2.7 | X-RAY DIFFRACTION | 0.239 | 0.216 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
4onf | H | L | 0 | P | peptide | null | amyloid beta a4 protein | IMMUNE SYSTEM | 01/28/14 | Fab fragment of 3D6 in complex with amyloid beta 1-7 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Feinberg, H., Saldanha, J.W., Diep, L., Goel, A., Widom, A., Veldman, G.M., Weis, W.I., Schenk, D., Basi, G.S. | 2.0 | X-RAY DIFFRACTION | 0.203 | 0.158 | false | true | IGHV5 | IGKV1 | Kappa | 0 | -12.170174 | Unknown | null | TBD |
6tcp | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 11/06/19 | Crystal structure of the omalizumab Fab Leu158Pro light chain mutant - crystal form II | HOMO SAPIENS | homo sapiens | homo sapiens | null | Mitropoulou, A.N., Ceska, T., Beavil, A.J., Henry, A.J., McDonnell, J.M., Sutton, B.J., Davies, A.M. | 2.5 | X-RAY DIFFRACTION | 0.239 | 0.212 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5u5m | B | A | 0 | C | E | protein | protein | NA | NA | immunoglobulin g binding protein a | protein l | IMMUNE SYSTEM | 12/06/16 | CRYSTAL STRUCTURE OF I83E MEDITOPE-ENABLED TRASTUZUMAB WITH AZIDO-MEDITOPE | HOMO SAPIENS; FINEGOLDIA MAGNA; STAPHYLOCOCCUS AUREUS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | staphylococcus aureus | finegoldia magna | Williams, J.C., Bzymek, K.P., Pucket, J., Avery, K.A., Ma, Y., Xie, J., Zer, C., Horne, D. | 1.88 | X-RAY DIFFRACTION | 0.197 | 0.161 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3dro | B | A | 0 | P | peptide | null | elleldkwaslwn gp41 peptide | IMMUNE SYSTEM | 07/11/08 | Crystal structure of the HIV-1 Cross Neutralizing Antibody 2F5 in complex with gp41 Peptide ELLELDKWASLWN grown in ammonium sulfate | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Julien, J.-P., Bryson, S., Pai, E.F. | 3.9 | X-RAY DIFFRACTION | 0.263 | 0.222 | false | true | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
6mhr | A | B | 0 | C | protein | null | tumor necrosis factor receptor superfamily member 9 | IMMUNE SYSTEM | 09/18/18 | Structure of the human 4-1BB / Urelumab Fab complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Kimberlin, C.R., Chin, S.M., Roe-Zurz, Z., Xu, A., Yang, Y. | 2.8 | X-RAY DIFFRACTION | 0.222 | 0.200 | false | true | IGHV4 | IGKV3 | Kappa | 0 | -10.446805 | SPR | null | TBD |
3tnm | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 09/01/11 | Crystal structure of A32 Fab, an ADCC mediating anti-HIV-1 antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wu, X., Pazgier, M. | 1.85 | X-RAY DIFFRACTION | 0.232 | 0.187 | false | true | IGHV4 | IGLV2 | Lambda | null | null | null | null | null |
6qpg | N | null | 0 | D | E | protein | protein | NA | NA | polymerase acidic protein | rna-directed rna polymerase catalytic subunit | RNA BINDING PROTEIN | 02/13/19 | Influenza A virus Polymerase Heterotrimer A/nt/60/1968(H3N2) in complex with Nanobody NB8205 | INFLUENZA A VIRUS (STRAIN A/NORTHERN TERRITORY/60/1968 H3N2); CAMELIDAE | camelidae | null | influenza a virus (strain a/northernterritory/60/1968 h3n2) | influenza a virus (strain a/northernterritory/60/1968 h3n2) | Fan, H.T., Keown, J.R., Fodor, E., Grimes, J.M. | 3.34 | X-RAY DIFFRACTION | 0.305 | 0.251 | false | true | IGHV3 | null | null | null | null | null | null | null |
2i60 | H | L | 0 | G | protein | null | exterior membrane glycoprotein(gp120) | VIRAL PROTEIN/IMMUNE SYSTEM | 08/26/06 | Crystal structure of [Phe23]M47, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 GP120 envelope glycoprotein and anti-HIV-1 antibody 17B | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Huang, C.-C., Kwong, P.D. | 2.4 | X-RAY DIFFRACTION | 0.281 | 0.215 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -11.193371 | SPR | null | TBD |
6vep | O | P | 0 | Q | protein | null | insulin receptor subunit alpha | HORMONE RECEPTOR/HORMONE/IMMUNE SYSTEM | 06/03/20 | Human insulin in complex with the human insulin microreceptor in turn in complex with Fv 83-7 | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Lawrence, M.C., Menting, J.G.T. | 2.9 | X-RAY DIFFRACTION | 0.225 | 0.193 | false | true | IGHV2 | IGKV8 | Kappa | null | null | null | null | null |
3mlu | H | L | 0 | P | peptide | null | hiv-1 gp120 third variable region (v3) crown | IMMUNE SYSTEM | 04/18/10 | Crystal structure of anti-HIV-1 V3 Fab 2557 in complex with a ZAM18 V3 peptide | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kong, X.-P. | 2.77 | X-RAY DIFFRACTION | 0.310 | 0.196 | false | false | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
5tr1 | H | L | 0 | A | protein | null | chloride channel protein | TRANSPORT PROTEIN | 10/25/16 | Cryo-electron microscopy structure of a bovine CLC-K chloride channel, alternate (class 2) conformation | BOS TAURUS; MUS MUSCULUS | mus musculus | mus musculus | bos taurus | Park, E., MacKinnon, R. | 3.95 | ELECTRON MICROSCOPY | null | null | false | false | IGHV3 | IGKV6 | Kappa | null | null | null | null | null |
1ken | T | U | 0 | C | E | protein | protein | NA | NA | hemagglutinin ha1 | hemagglutinin ha1 | Viral protein/Immune system | 11/16/01 | INFLUENZA VIRUS HEMAGGLUTININ COMPLEXED WITH AN ANTIBODY THAT PREVENTS THE HEMAGGLUTININ LOW PH FUSOGENIC TRANSITION | INFLUENZA A VIRUS (A/X-31(H3N2)); MUS MUSCULUS | mus musculus | mus musculus | influenza a virus (a/x-31(h3n2)) | influenza a virus (a/x-31(h3n2)) | Barbey-Martin, C., Gigant, B., Bizebard, T., Calder, L.J., Wharto, S.A., Skehel, J.J., Knossow, M. | 3.5 | X-RAY DIFFRACTION | 0.323 | 0.255 | false | false | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
1u8j | B | A | 0 | C | peptide | null | gp41 peptide | IMMUNE SYSTEM | 08/06/04 | Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ELDKWAG | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Bryson, S., Julien, J.-P., Hynes, R.C., Pai, E.F. | 2.24 | X-RAY DIFFRACTION | 0.239 | 0.229 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
6uum | H | F | 0 | null | null | null | null | IMMUNE SYSTEM | 10/30/19 | Crystal structure of antibody 438-B11 DSS mutant (Cys98A-Cys100aA) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kumar, S., Wilson, I.A. | 2.1 | X-RAY DIFFRACTION | 0.269 | 0.229 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
1tpx | B | C | 0 | A | protein | null | major prion protein | UNKNOWN FUNCTION | 06/16/04 | Ovine recombinant PrP(114-234), ARQ variant in complex with the Fab of the VRQ14 antibody | OVIS ARIES; MUS MUSCULUS | mus musculus | mus musculus | ovis aries | Eghiaian, F., Grosclaude, J., Lesceu, S., Debey, P., Doublet, B., Treguer, E., Rezaei, H., Knossow, M. | 2.56 | X-RAY DIFFRACTION | 0.282 | 0.220 | false | false | IGHV9 | IGKV1 | Kappa | null | null | null | null | null |
5dd3 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/24/15 | Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Nicely, N.I., Pemble IV, C.W., Haynes, B.F. | 1.797 | X-RAY DIFFRACTION | 0.248 | 0.199 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
2mmx | null | A | 7 | null | null | null | null | IMMUNE SYSTEM | 03/20/14 | NMR study of 6aJL2 | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
4f15 | H | I | 0 | G | protein | null | hemagglutinin | IMMUNE SYSTEM | 05/06/12 | Molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses | INFLUENZA A VIRUS; MUS MUSCULUS | mus musculus | mus musculus | influenza a virus | Kim, K.H., Cho, K.J., Lee, J.H., Park, Y.H., Khan, T.G., Lee, J.Y., Kang, S.H., Alam, I. | 2.81 | X-RAY DIFFRACTION | 0.289 | 0.233 | false | false | IGHV3 | IGKV7 | Kappa | null | null | null | null | null |
6myy | D | C | 0 | B | protein | null | 426c ds-sosip d3 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/02/18 | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Borst, A.J., Weidle, C.E., Gray, M.D., Frenz, B., Snijder, J., Joyce, M.G., Georgiev, I.S., Stewart-Jones, G.B.E., Kwong, P.D., McGuire, A.T., DiMaio, F., Stamatatos, L., Pancera, M., Veesler, D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5mwn | N | null | 0 | A | protein | null | type vi secretion protein | TRANSPORT PROTEIN | 01/18/17 | Structure of the EAEC T6SS component TssK N-terminal domain in complex with llama nanobodies nbK18 and nbK27 | LAMA GLAMA; ESCHERICHIA COLI | null | null | escherichia coli | Cambillau, C., Nguyen, V.S., Spinelli, S., Legrand, P. | 2.2 | X-RAY DIFFRACTION | 0.220 | 0.199 | false | true | IGHV1 | null | null | null | null | null | null | null |
3jbq | H | L | 0 | F | protein | null | phosphodiesterase 5/6 chimera catalytic domain | HYDROLASE/IMMUNE SYSTEM | 09/17/15 | Domain Organization and Conformational Plasticity of the G Protein Effector, PDE6 | MUS MUSCULUS; BOS TAURUS | mus musculus | mus musculus | bos taurus | Zhang, Z., He, F., Constantine, R., Baker, M.L., Baehr, W., Schmid, M.F., Wensel, T.G., Agosto, M.A. | 11 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
3ijh | B | A | 0 | B | carbohydrate | KO2 | PROP-2-EN-1-YL D-GLYCERO-ALPHA-D-TALO-OCT-2-ULOPYRANOSIDONIC ACID | IMMUNE SYSTEM | 08/04/09 | Structure of S67-27 in Complex with Ko | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Brooks, C.L., Blackler, R.J., Evans, S.V. | 2.1 | X-RAY DIFFRACTION | 0.254 | 0.213 | false | false | IGHV7 | IGKV8 | Kappa | 0.0001 | -5.456976 | Unknown | null | TBD |
1mak | null | A | 8 | null | null | null | null | IMMUNOGLOBULIN | 09/16/93 | SOLUTION STRUCTURE OF AN ISOLATED ANTIBODY VL DOMAIN | MUS MUSCULUS | null | mus musculus | null | Constantine, K.L., Friedrichs, M.S., Metzler, W.J., Wittekind, M., Hensley, P., Mueller, L. | NOT | SOLUTION NMR | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
7vsu | D | C | 0 | null | null | null | null | BIOSYNTHETIC PROTEIN | 10/27/21 | Crystal structure of Fab fragment of anti-mesothelin antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Yang, Z., Ying, T. | 3.1 | X-RAY DIFFRACTION | 0.249 | 0.215 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7r8l | H | L | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/26/21 | Structure of the SARS-CoV-2 RBD in complex with neutralizing antibody C099 and CR3022 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Bjorkman, P.J. | 2.6 | X-RAY DIFFRACTION | 0.229 | 0.180 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3cdf | null | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/08 | kI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Baden, E.M., Randles, E.G., Thompson, J.R., Ramirez-Alvarado, M. | 1.53 | X-RAY DIFFRACTION | 0.231 | 0.189 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
5xcu | D | E | 0 | F | peptide | null | ha peptide | IMMUNE SYSTEM | 03/23/17 | Crystal structure of 12CA5 Fv-clasp fragment with its antigen peptide | MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Arimori, T., Takagi, J. | 2.454 | X-RAY DIFFRACTION | 0.247 | 0.199 | false | true | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
7ocy | C | null | 0 | A | B | protein | protein | NA | NA | abc transporter atp-binding protein | abc transporter atp-binding protein | MEMBRANE PROTEIN | 04/28/21 | Enterococcus faecalis EfrCD in complex with a nanobody | ENTEROCOCCUS FAECALIS; VICUGNA PACOS | vicugna pacos | null | enterococcus faecalis | enterococcus faecalis | Ehrenbolger, K., Hutter, C.A.J., Meier, G., Seeger, M.A., Barandun, J. | 4.25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4uif | K | L | 0 | C | protein | null | dengue virus serotype 2 strain pvp94 07 - envelopeprotein | null | 03/30/15 | Cryo-EM structure of Dengue virus serotype 2 in complex with antigen- binding fragments of human antibody 2D22 | DENGUE VIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 2 | Fibriansah, G., Ibarra, K.D., Ng, T.-S., Smith, S.A., Tan, J.L., Lim, X.-N., Ooi, J.S.G., Kostyuchenko, V.A., Wang, J., de Silva, A.M., Harris, E., Crowe Junior, J.E., Lok, S.-M. | 6.5 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
4c2i | H | L | 0 | C | protein | null | envelope protein | VIRUS | 08/18/13 | Cryo-EM structure of Dengue virus serotype 1 complexed with Fab fragments of human antibody 1F4 | HOMO SAPIENS; DENGUE VIRUS 1 | homo sapiens | homo sapiens | dengue virus 1 | Fibriansah, G., Tan, J.L., de Alwis, R., Smith, S.A., Ng, T.-S., Kostyuchenko, V.A., Ibarra, K.D., Harris, E., de Silva, A., Crowe Junior, J.E., Lok, S.-M. | 6.0 | ELECTRON MICROSCOPY | null | null | false | false | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7x2f | E | null | 0 | A | B | D | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short, isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | MEMBRANE PROTEIN | 02/25/22 | Cryo-EM structure of the dopamine and LY3154207-bound D1 dopamine receptor and mini-Gs complex | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | homo sapiens | homo sapiens | Teng, X., Zheng, S. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
2c1o | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/19/05 | ENAIIHis Fab fragment in the free form | MUS MUSCULUS | mus musculus | mus musculus | null | Parkkinen, T., Nevanen, T., Koivula, A., Rouvinen, J. | 2.75 | X-RAY DIFFRACTION | 0.3011 | 0.2184 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6xxn | F | null | 0 | null | null | null | null | ANTITUMOR PROTEIN | 06/10/20 | Crystal structure of NB7, a nanobody targeting prostate specific membrane antigen | CAMELUS DROMEDARIUS | camelus dromedarius | null | null | Shahar, A., Rosenfeld, L., Papo, N. | 2.65 | X-RAY DIFFRACTION | 0.231 | 0.182 | false | true | IGHV1 | null | null | null | null | null | null | null |
6sc6 | B | null | 0 | A | protein | null | e3 ubiquitin-protein ligase rnf31 | LIGASE | 07/23/19 | dAb3/HOIP-RBR apo structure | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | Tsai, Y.-C.I., House, D., Rittinger, K. | 2.25 | X-RAY DIFFRACTION | 0.246 | 0.199 | false | true | IGHV3 | null | null | null | null | null | null | null |
6wo3 | H | L | 0 | E | protein | null | envelope glycoprotein e2 | IMMUNE SYSTEM/Viral Protein | 04/24/20 | Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody U1 | RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1; HOMO SAPIENS | homo sapiens | homo sapiens | recombinant hepatitis c virus hk6a/jfh-1 | Tzarum, N., Wilson, I.A., Law, M. | 2.382 | X-RAY DIFFRACTION | 0.260 | 0.230 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6my4 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 11/01/18 | Crystal structure of the dimeric bH1-Fab variant [HC-Y33W,HC-D98M,HC-G99M,LC-S30bR] | HOMO SAPIENS | homo sapiens | homo sapiens | null | Shi, R., Picard, M.-E., Manenda, M. | 1.69 | X-RAY DIFFRACTION | 0.230 | 0.189 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1yef | H | L | 0 | L | Hapten | PNC | PARA-NITROBENZYL GLUTARYL GLYCINIC ACID | CATALYTIC ANTIBODY | 05/29/97 | STRUCTURE OF IGG2A FAB FRAGMENT (D2.3) COMPLEXED WITH SUBSTRATE ANALOGUE | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Gigant, B., Knossow, M. | 2.0 | X-RAY DIFFRACTION | 0.248 | 0.199 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2znx | B | b | 0 | Z | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 05/02/08 | 5-Fluorotryptophan Incorporated ScFv10 Complexed to Hen Egg Lysozyme | MUS MUSCULUS; SYNTHETIC CONSTRUCT; GALLUS GALLUS | mus musculus, synthetic construct | null | gallus gallus | DeSantis, M.E., Acchione, M., Li, M., Walter, R.L., Wlodawer, A., Smith-Gill, S. | 2.3 | X-RAY DIFFRACTION | 0.232 | 0.193 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5gs1 | I | i | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/16 | Crystal structure of homo-specific diabody | HOMO SAPIENS | homo sapiens | null | null | Kim, J.H., Song, D.H., Youn, S.J., Kim, J.W., Cho, G., Lee, H., Lee, J.O. | 2.0 | X-RAY DIFFRACTION | 0.286 | 0.267 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7v0v | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/11/22 | GFP Nanobody NMR Structure | SYNTHETIC CONSTRUCT | synthetic construct | null | null | Mueller, G.A. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7oan | F | null | 0 | A | protein | null | spike glycoprotein | ANTIVIRAL PROTEIN | 04/19/21 | Nanobody C5 bound to Spike | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Naismith, J.H., Weckener, M. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3cfk | N | M | 0 | M | Hapten | B3P | 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | IMMUNE SYSTEM | 03/04/08 | Crystal structure of catalytic elimination antibody 34E4, triclinic crystal form | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | mus musculus, homo sapiens | Debler, E.W., Wilson, I.A. | 2.6 | X-RAY DIFFRACTION | 0.244 | 0.221 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
7qnb | N | null | 0 | E | D | protein | protein | NA | NA | gamma-aminobutyric acid receptor subunit beta-3 | gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 12/20/21 | Cryo-EM structure of human full-length beta3gamma2 GABA(A)R in complex with GABA and nanobody Nb25 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | homo sapiens | Sente, A., Desai, R., Naydenova, K., Malinauskas, T., Jounaidi, Y., Miehling, J., Zhou, X., Masiulis, S., Hardwick, S.W., Chirgadze, D.Y., Miller, K.W., Aricescu, A.R. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
2p44 | B | null | 0 | A | protein | null | ribonuclease pancreatic | HYDROLASE/IMMUNE SYSTEM | 03/11/07 | Complex of a camelid single-domain vhh antibody fragment with RNASE A at 1.8A resolution: SE5A-mono-1 crystal form with five se-met sites (M34, M51, F68M, M83, L86M) in vhh scaffold | CAMELUS DROMEDARIUS; BOS TAURUS | camelus dromedarius | null | bos taurus | Tereshko, V., Uysal, S., Koide, A., Margalef, K., Koide, S., Kossiakoff, A.A. | 1.8 | X-RAY DIFFRACTION | 0.238 | 0.193 | false | true | IGHV1 | null | null | 0 | -10.67 | Other | 30 | 18445622 |
7nd6 | H | L | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/30/21 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-40 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D. | 7.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7mmo | A | B | 0 | C | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 04/30/21 | LY-CoV1404 neutralizing antibody against SARS-CoV-2 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Hendle, J., Pustilnik, A., Sauder, J.M., Coleman, K.A., Boyles, J.S., Dickinson, C.D. | 2.427 | X-RAY DIFFRACTION | 0.253 | 0.226 | false | true | IGHV2 | IGLV2 | Lambda | null | null | null | null | null |
1g9e | A | null | 13 | null | null | null | null | IMMUNE SYSTEM | 11/23/00 | SOLUTION STRUCTURE AND RELAXATION MEASUREMENTS OF AN ANTIGEN-FREE HEAVY CHAIN VARIABLE DOMAIN (VHH) FROM LLAMA | LAMA GLAMA | lama glama | null | null | Renisio, J.-G., Perez, J., Czisch, M., Guenneugues, M., Bornet, O., Frenken, L., Cambillau, C., Darbon, H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7tpr | D | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/25/22 | Camel nanobodies 7A3 and 8A2 broadly neutralize SARS-CoV-2 variants | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; CAMELUS DROMEDARIUS | camelus dromedarius | null | severe acute respiratory syndrome coronavirus2 | Butay, K.J., Zhu, J., Dandey, V.P., Hong, J., Kwon, H.J., Chen, C.Z., Duan, Z., Li, D., Ren, H., Liang, T., Martin, N., Esposito, D., Ortega-Rodriguez, U., Xu, M., Xie, H., Ho, M., Cachau, R., Borgnia, M.J. | 2.39 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4krm | B | null | 0 | A | protein | null | epidermal growth factor receptor | TRANSFERASE/IMMUNE SYSTEM | 05/16/13 | Nanobody/VHH domain 7D12 in complex with domain III of the extracellular region of EGFR, pH 3.5 | LAMA GLAMA; HOMO SAPIENS | lama glama | null | homo sapiens | Ferguson, K.M., Schmitz, K.R. | 2.655 | X-RAY DIFFRACTION | 0.244 | 0.208 | false | true | IGHV1 | null | null | null | null | null | null | null |
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