pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7wi0 | C | E | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN | 01/01/22 | SARS-CoV-2 Omicron variant spike in complex with three human neutralizing antibodies | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Zheng, Q., Li, S., Sun, H., Zheng, Z., Wang, S. | 3.82 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7kfg | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 10/13/20 | Antibody Fab BDBV-289 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Murin, C.D., Bruhn, J.F., Ward, A.B. | 3.002 | X-RAY DIFFRACTION | 0.268 | 0.221 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
5hi5 | C | D | 0 | A | protein | null | interleukin-17a | IMMUNE SYSTEM/INHIBITOR | 01/11/16 | Binding site elucidation and structure guided design of macrocyclic IL-17A antagonists | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Liu, S. | 1.8 | X-RAY DIFFRACTION | 0.219 | 0.201 | false | true | IGHV3 | IGLV6 | Lambda | null | null | null | null | null |
1t03 | H | L | 0 | B | protein | null | pol polyprotein | Transferase/Antibody/DNA | 04/07/04 | HIV-1 reverse transcriptase crosslinked to tenofovir terminated template-primer (complex P) | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Tuske, S., Sarafianos, S.G., Ding, J., Arnold, E. | 3.1 | X-RAY DIFFRACTION | 0.295 | 0.256 | false | false | IGHV8 | IGKV10 | Kappa | null | null | null | null | null |
2mmx | null | A | 17 | null | null | null | null | IMMUNE SYSTEM | 03/20/14 | NMR study of 6aJL2 | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
2fjh | B | A | 0 | W | protein | null | vascular endothelial growth factor a | HORMONE/GROWTH FACTOR/IMMUNE SYSTEM | 01/02/06 | Structure of the B20-4 Fab, a phage derived Fab fragment, in complex with VEGF | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wiesmann, C. | 3.1 | X-RAY DIFFRACTION | 0.239 | 0.198 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -11.94 | SPR | 37 | 16373345 |
6qd6 | I | null | 0 | null | null | null | null | STRUCTURAL PROTEIN | 12/31/18 | Molecular scaffolds expand the nanobody toolkit for cryo-EM applications: crystal structure of Mb-cHopQ-Nb207 | HELICOBACTER PYLORI; HELICOBACTER PYLORI (STRAIN G27) | helicobacter pylori, helicobacter pylori(strain g27) | null | null | Uchanski, T., Masiulis, S., Fischer, B., Kalichuk, V., Wohlkonig, A., Zogg, T., Remaut, H., Vranken, W., Aricescu, A.R., Pardon, E., Steyaert, J. | 2.84 | X-RAY DIFFRACTION | 0.239 | 0.204 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ly2 | N | O | 0 | J | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/21 | SARS-CoV-2 S/S2M11/S2M28 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
4am0 | H | L | 0 | R | protein | null | envelope protein, | VIRAL PROTEIN | 03/06/12 | Structure of Dengue virus strain 4 DIII in complex with Fab 2H12 | DENGUE VIRUS; HOMO SAPIENS, MUS MUSCULUS | homo sapiens, mus musculus | homo sapiens, mus musculus | dengue virus | Midgley, C.M., Flanagan, A., Mongkolsapaya, J., Grimes, J.M., Screaton, G.R. | 3.02 | X-RAY DIFFRACTION | 0.2522 | 0.1960 | false | false | IGHV1 | IGKV6 | Kappa | 0 | -12.792177 | ELISA | null | TBD |
5vl2 | G | null | 0 | G | Hapten | 9EG | N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea | UNKNOWN FUNCTION | 04/24/17 | The hapten triclocarban bound to the single domain camelid nanobody VHH T4 | LAMA GLAMA | lama glama | null | lama glama | Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.9 | X-RAY DIFFRACTION | 0.263 | 0.219 | false | true | IGHV1 | null | null | null | null | null | null | null |
7kpj | A | B | 0 | E | protein | null | gram_pos_anchoring domain-containing protein | IMMUNE SYSTEM | 11/11/20 | Crystal structure of Ruminococcus gnavus immunoglobulin binding protein in complex with 338E6 Fab | MUS MUSCULUS; RUMINOCOCCUS GNAVUS | mus musculus | mus musculus | ruminococcus gnavus | Borowska, M.T., Adams, E.J. | 2.1 | X-RAY DIFFRACTION | 0.266 | 0.229 | false | true | IGHV5 | IGKV6 | Kappa | null | null | null | null | null |
6s8d | P | O | 0 | C | protein | null | envelope glycoprotein | VIRAL PROTEIN | 07/09/19 | Structure of ZEBOV GP in complex with 1T0227 antibody | HOMO SAPIENS; EBOLA VIRUS | homo sapiens | homo sapiens | ebola virus | Diskin, R., Cohen-Dvashi, H. | 3.49 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6lgw | C | D | 0 | F | protein | null | glycoprotein,glycoprotein,glycoprotein | VIRAL PROTEIN | 12/06/19 | Structure of Rabies virus glycoprotein in complex with neutralizing antibody 523-11 at acidic pH | MUS MUSCULUS; RABIES LYSSAVIRUS | mus musculus | mus musculus | rabies lyssavirus | Yang, F.L., Lin, S., Ye, F., Yang, J., Qi, J.X., Chen, Z.J., Lin, X., Wang, J.C., Yue, D., Cheng, Y.W., Chen, Z.M., Chen, H., You, Y., Zhang, Z.L., Yang, Y., Yang, M., Sun, H.L., Li, Y.H., Cao, Y., Yang, S.Y., Wei, Y.Q., Gao, G.F., Lu, G.W. | 2.9037 | X-RAY DIFFRACTION | 0.268 | 0.218 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
4zso | D | C | 0 | F | protein | null | natural cytotoxicity triggering receptor 3 ligand 1 | IMMUNE SYSTEM | 05/13/15 | Crystal structure of a complex between B7-H6, a tumor cell ligand for natural cytotoxicity receptor NKp30, and an inhibitory antibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Xu, X., Li, Y., Mariuzza, R.A. | 2.5 | X-RAY DIFFRACTION | 0.257 | 0.226 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6eyn | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/13/17 | Structure of the 8D6 (anti-IgE) Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Chen, J.B., Ramadani, F., Pang, M.O.Y., Beavil, R.L., Holdom, M.D., Mitropoulou, A.N., Beavil, A.J., Gould, H.J., Chang, T.W., Sutton, B.J., McDonnell, J.M., Davies, A.M. | 2.4 | X-RAY DIFFRACTION | 0.212 | 0.181 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3jbd | 7 | null | 0 | 3 | protein | null | capsid protein vp3 | VIRUS/IMMUNE SYSTEM | 08/26/15 | Complex of poliovirus with VHH PVSP6A | CAMELUS DROMEDARIUS; HUMAN POLIOVIRUS 1 MAHONEY | camelus dromedarius | null | human poliovirus 1 mahoney | Strauss, M., Schotte, L., Thys, B., Filman, D.J., Hogle, J.M. | 4.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6z1z | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/14/20 | Structure of the anti-CD9 nanobody 4C8 | LAMA GLAMA | lama glama | null | null | Neviani, N., Oosterheert, W., Pearce, N.M., Lutz, M., Kroon-Batenburg, L.M.J., Gros, P. | 1.7 | X-RAY DIFFRACTION | 0.231 | 0.201 | false | true | IGHV1 | null | null | null | null | null | null | null |
5x2o | H | L | 0 | A | protein | null | taste receptor, type 1, member 2a | SIGNALING PROTEIN/IMMUNE SYSTEM | 02/02/17 | Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-arginine | ORYZIAS LATIPES; MUS MUSCULUS | mus musculus | mus musculus | oryzias latipes | Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A. | 2.6 | X-RAY DIFFRACTION | 0.272 | 0.185 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1h8o | B | b | 0 | null | null | null | null | ANTIBODY | 02/14/01 | Selection, characterization and X-ray Structure of anti-ampicillin single chain Fv fragments from phage-displayed murine antibody libraries | MUS MUSCULUS | mus musculus | null | null | Burmester, J., Spinelli, S., Pugliese, L., Krebber, A., Honegger, A., Jung, S., Schimmele, B., Cambillau, C., Pluckthun, A. | 2.75 | X-RAY DIFFRACTION | 0.258 | 0.178 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7kej | I | L | 0 | C | protein | null | virion spike glycoprotein | VIRAL PROTEIN/Immune System | 10/11/20 | BDBV-289 bound to EBOV GPdMuc Makona | EBOLA VIRUS; HOMO SAPIENS; ZAIRE EBOLAVIRUS | homo sapiens | homo sapiens | ebola virus | Murin, C.D., Ward, A.B. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
3qxu | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 03/02/11 | Free Structure of an Anti-Methotrexate CDR1-3 Graft VHH Antibody | LAMA GLAMA | lama glama | null | null | Fanning, S.W., Horn, J.R. | 1.8 | X-RAY DIFFRACTION | 0.214 | 0.182 | false | true | IGHV1 | null | null | null | null | null | null | null |
7a3p | I | M | 0 | B | protein | null | envelope protein e | VIRAL PROTEIN | 08/18/20 | Crystal structure of dengue 3 virus envelope glycoprotein in complex with the scFv fragment of the broadly neutralizing human antibody EDE1 C10 | DENGUE VIRUS 3; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 3 | Sharma, A., Vaney, M.C., Guardado-Calvo, P., Duquerroy, S., Rouvinski, A., Rey, F.A. | 3.19 | X-RAY DIFFRACTION | 0.284 | 0.241 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
3jab | H | L | 0 | C | protein | null | phosphodiesterase 5/6 chimera catalytic domain | HYDROLASE/IMMUNE SYSTEM | 05/26/15 | Domain organization and conformational plasticity of the G protein effector, PDE6 | BOS TAURUS; MUS MUSCULUS | mus musculus | mus musculus | bos taurus | Zhang, Z., He, F., Constantine, R., Baker, M.L., Baehr, W., Schmid, M.F., Wensel, T.G., Agosto, M.A. | 11 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
4y5v | A | B | 0 | C | protein | null | erythropoietin receptor | protein binding/immune system | 02/12/15 | Diabody 305 complex with EpoR | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Moraga, I., Guo, F., Ozkan, E., Jude, K.M., Garcia, K.C. | 2.604 | X-RAY DIFFRACTION | 0.229 | 0.187 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
3cdc | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/08 | kI O18/O8 N34I/Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Baden, E.M., Randles, E.G., Thompson, J.R., Ramirez-Alvarado, M. | 1.53 | X-RAY DIFFRACTION | 0.231 | 0.189 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
7ly2 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/21 | SARS-CoV-2 S/S2M11/S2M28 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
7kf9 | I | L | 0 | C | protein | null | virion spike glycoprotein 1 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/13/20 | Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-296 and EBOV-515 | HOMO SAPIENS; EBOLA VIRUS | homo sapiens | homo sapiens | ebola virus | Murin, C.D., Ward, A.B. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
6osy | F | E | 0 | B | protein | null | bg505 gp120 | IMMUNE SYSTEM | 05/02/19 | Cryo-EM structure of vaccine-elicited antibody 0PV-a.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
5w08 | O | P | 0 | E | protein | null | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/30/17 | A/Texas/50/2012(H3N2) Influenza hemagglutinin in complex with K03.12 Fab | INFLUENZA A VIRUS (A/TEXAS/50/2012(H3N2)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/texas/50/2012(h3n2)) | McCarthy, K.R., Harrison, S.C. | 2.6 | X-RAY DIFFRACTION | 0.262 | 0.240 | false | true | IGHV1 | IGLV2 | Lambda | 0 | -10.092596 | SPR | null | TBD |
7eam | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN, IMMUNE SYSTEM | 03/07/21 | immune complex of SARS-CoV-2 RBD and cross-neutralizing antibody 7D6 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Li, T.T., Gu, Y., Li, S.W. | 1.4 | X-RAY DIFFRACTION | 0.182 | 0.172 | false | false | IGHV14 | IGKV12 | Kappa | null | null | null | null | null |
5e5m | F | null | 0 | E | protein | null | cytotoxic t-lymphocyte protein 4 | IMMUNE SYSTEM | 10/08/15 | Crystal structure of mouse CTLA-4 in complex with nanobody | MUS MUSCULUS | mus musculus | null | mus musculus | Fedorov, A.A., Fedorov, E.V., Samanta, D., Bonanno, J.B., Almo, S.C. | 2.182 | X-RAY DIFFRACTION | 0.247 | 0.193 | false | true | IGHV1 | null | null | null | null | null | null | null |
5utz | F | G | 0 | E | protein | null | interleukin-2 | CYTOKINE/IMMUNE SYSTEM | 02/15/17 | Human IL-2/Fab complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Jude, K.M., Garcia, K.C. | 2.747 | X-RAY DIFFRACTION | 0.248 | 0.193 | false | true | IGHV4 | IGLV6 | Lambda | 0 | -11.904494 | SPR | null | TBD |
7ej5 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 04/01/21 | Cryo-EM structure of SARS-CoV-2 spike in complex with a neutralizing antibody RBD-chAb-45 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yang, T.J., Yu, P.Y., Wu, H.C., Hsu, S.T.D. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
7oan | H | null | 0 | C | protein | null | spike glycoprotein | ANTIVIRAL PROTEIN | 04/19/21 | Nanobody C5 bound to Spike | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Naismith, J.H., Weckener, M. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
2qtj | D | N | 6 | null | null | null | null | IMMUNE SYSTEM | 08/02/07 | Solution structure of human dimeric immunoglobulin A | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6psc | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 06/17/20 | Antibody scFv-M204 trimeric state | ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | null | null | Abskharon, R., Sawaya, M.R., Seidler, P.M., Cascio, D., Eisenberg, D.S. | 3.6 | X-RAY DIFFRACTION | 0.282 | 0.252 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7faf | H | L | 0 | C | protein | null | p36-5d2 light chain | VIRAL PROTEIN/IMMUNE SYSTEM | 07/06/21 | S protein of SARS-CoV-2 in complex bound with P36-5D2 (state1) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhang, L., Wang, X., Zhang, S., Shan, S. | 3.69 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1vhp | A | null | 17 | null | null | null | null | IMMUNOGLOBULIN | 04/16/96 | VH-P8, NMR | HOMO SAPIENS | homo sapiens | null | null | Riechmann, L. | NOT | SOLUTION NMR | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
6wik | D | C | 0 | A | protein | null | solute carrier family 40 protein | MEMBRANE PROTEIN | 04/10/20 | Cryo-EM structure of SLC40/ferroportin with Fab in the presence of hepcidin | CARLITO SYRICHTA; MUS MUSCULUS | mus musculus | mus musculus | carlito syrichta | Shen, J., Ren, Z., Pan, Y., Gao, S., Yan, N., Zhou, M. | 3.4 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
3pjs | D | C | 0 | K | L | protein | protein | NA | NA | voltage-gated potassium channel | voltage-gated potassium channel | TRANSPORT PROTEIN | 11/10/10 | Mechanism of Activation Gating in the Full-Length KcsA K+ Channel | MUS MUSCULUS; STREPTOMYCES LIVIDANS | mus musculus | mus musculus | streptomyces lividans | streptomyces lividans | Uysal, S., Cuello, L.G., Kossiakoff, A., Perozo, E. | 3.8 | X-RAY DIFFRACTION | 0.332 | 0.281 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5uhy | H | G | 0 | A | protein | null | envelope protein | VIRUS/IMMUNE SYSTEM | 01/12/17 | A Human Antibody Against Zika Virus Crosslinks the E Protein to Prevent Infection | HOMO SAPIENS; ZIKA VIRUS | homo sapiens | homo sapiens | zika virus | Hasan, S.S., Miller, A., Sapparapu, G., Fernandez, E., Klose, T., Long, F., Fokine, A., Porta, J.C., Jiang, W., Diamond, M.S., Crowe Jr., J.E., Kuhn, R.J., Rossmann, M.G. | 6.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
5yax | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 09/02/17 | Crystal structure of a human neutralizing antibody bound to a HBV preS1 peptide | HOMO SAPIENS; HEPATITIS B VIRUS | homo sapiens | null | null | Liu, X., Zheng, S., Ye, K., Sui, J. | 2.5 | X-RAY DIFFRACTION | 0.288 | 0.242 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5cck | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/02/15 | Crystal structure of Human anti-HIV-1 broadly neutralizing antibody 3BC315 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Lee, J.H., Ward, A.B., Wilson, I.A. | 1.95 | X-RAY DIFFRACTION | 0.207 | 0.156 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
5vn8 | F | J | 0 | D | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM | 04/28/17 | Cryo-EM model of B41 SOSIP.664 in complex with fragment antigen binding variable domain of b12 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Ozorowski, G., Pallesen, J., Ward, A.B., Cottrell, C.A. | 3.6 | ELECTRON MICROSCOPY / HOMOLOGY MODEL | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7w9f | A | B | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN | 12/09/21 | SARS-CoV-2 Delta S-RBD-8D3 | MUS MUSCULUS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Cong, Y., Liu, C.X. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
7kza | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/10/20 | Potent SARS-CoV-2 binding and neutralization through maturation of iconic SARS-CoV-1antibodies | HOMO SAPIENS | homo sapiens | homo sapiens | null | Langley, D.B., Christ, D. | 1.69 | X-RAY DIFFRACTION | 0.192 | 0.166 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7n07 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/25/21 | Crystal structure of the apo 3D6 antibody fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Cook, J.D., Lee, J.E. | 2.4 | X-RAY DIFFRACTION | 0.239 | 0.195 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6ewb | J | K | 0 | D | protein | null | vp1 | VIRAL PROTEIN | 11/03/17 | Crystal structure of GII.4 UNSW 2012 P domain in complex with Fab 10E9 | NOROVIRUS HU/GII.4/SYDNEY/NSW0514/2012/AU; MUS MUSCULUS | mus musculus | mus musculus | norovirus hu/gii.4/sydney/nsw0514/2012/au | Koromyslova, A.D., Hansman, G.S. | 2.78 | X-RAY DIFFRACTION | 0.222 | 0.186 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6p91 | H | L | 0 | a | A | protein | protein | NA | NA | unknown | pre-glycoprotein polyprotein gp complex,lassa virusglycoprotein, gp2 subunit | viral protein/immune system | 06/09/19 | Structure of Lassa virus glycoprotein bound to Fab 18.5C | LASSA MAMMARENAVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | lassa mammarenavirus | lassa mammarenavirus | Saphire, E.O., Hastie, K.M. | 4.0 | X-RAY DIFFRACTION | 0.254 | 0.204 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6cue | 7 | 8 | 0 | 2 | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN | 03/26/18 | Cryo-EM structure at 4.0 A resolution of vaccine-elicited antibody vFP7.04 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Carragher, B., Potter, C.S., Kwong, P.D. | 4.0 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
6db9 | H | L | 0 | R | nucleic-acid | null | rna (60-mer) | RNA/Immune System | 05/02/18 | Structural basis for promiscuous binding and activation of fluorogenic dyes by DIR2s RNA aptamer | SYNTHETIC CONSTRUCT; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | synthetic construct | Shao, Y., Shelke, S.A., Laski, A., Piccirilli, J.A. | 2.025 | X-RAY DIFFRACTION | 0.257 | 0.230 | false | true | IGHV3 | IGKV1 | Kappa | 0.000001 | -8.390056 | Unknown | null | TBD |
7bxa | H | L | 0 | P | protein | null | programmed cell death protein 1 | IMMUNE SYSTEM | 06/10/20 | Crystal structure of PD-1 in complex with tislelizumab Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Heo, Y.S., Lee, S.H., Lim, H., Lee, H.T., Kim, Y.J., Park, E.B. | 3.32 | X-RAY DIFFRACTION | 0.299 | 0.243 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
1frg | H | L | 0 | P | peptide | null | influenza hemagglutinin ha1 (strain x47)(residues 101 - 108) | VIRAL PROTEIN/IMMUNE SYSTEM | 01/17/94 | CRYSTAL STRUCTURE, SEQUENCE, AND EPITOPE MAPPING OF A PEPTIDE COMPLEX OF AN ANTI-INFLUENZA HA PEPTIDE ANTIBODY FAB 26(SLASH)9: FINE-TUNING ANTIBODY SPECIFICITY | MUS MUSCULUS | null | mus musculus | null | Churchill, M.E.A., Wilson, I.A. | 2.8 | X-RAY DIFFRACTION | unknown | 0.190 | false | true | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
1t04 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/07/04 | Three dimensional structure of a humanized anti-IFN-Gamma Fab in C2 space group | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bourne, P.C., Terzyan, S.S., Cloud, G., Landolfi, N.F., Vasquez, M., Edmundson, A.B. | 3.0 | X-RAY DIFFRACTION | 0.293 | 0.217 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4nyl | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/10/13 | Crystal structure of adalimumab FAB fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Fan, L.J., Lv, L.L., Zhang, Q.J., Chen, C.L. | 2.8 | X-RAY DIFFRACTION | 0.358 | 0.275 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3lrs | C | D | 0 | D | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 02/11/10 | Structure of PG16, an antibody with broad and potent neutralization of HIV-1 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pancera, M., Kwong, P.D. | 2.37 | X-RAY DIFFRACTION | 0.260 | 0.211 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6lhq | H | L | 0 | A | C | B | protein | protein | protein | NA | NA | NA | vp1 protein | vp3 protein | vp2 protein | VIRUS | 12/09/19 | The cryo-EM structure of coxsackievirus A16 mature virion in complex with Fab NA9D7 | COXSACKIEVIRUS A16; MUS MUSCULUS | mus musculus | mus musculus | coxsackievirus a16 | coxsackievirus a16 | coxsackievirus a16 | He, M.Z., Xu, L.F., Zheng, Q.B., Zhu, R., Yin, Z.C., Cheng, T., Li, S.W. | 3.06 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
4dke | I | M | 0 | B | protein | null | interleukin-34 | CYTOKINE/IMMUNE SYSTEM | 02/03/12 | Crystal Structure of Human Interleukin-34 Bound to FAb1.1 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ma, X., Chen, Y., Stawicki, S., Wu, Y., Bazan, J.F., Starovasnik, M.A. | 3.0 | X-RAY DIFFRACTION | 0.265 | 0.231 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -13.534418 | SPR | null | TBD |
4ybl | B | C | 0 | A | protein | null | stabilized inner domain of clade a/e gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/18/15 | Crystal structure of the stabilized inner domain of clade A/E HIV-1 gp120 in complex with the ADCC mediating ANTI-HIV-1 antibody A32 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Tolbert, W.D., Gohain, N., Pazgier, M. | 3.1 | X-RAY DIFFRACTION | 0.289 | 0.232 | false | true | IGHV4 | IGLV2 | Lambda | 0 | -13.328052 | SPR | null | TBD |
6h3u | I | M | 0 | A | protein | null | envelopment polyprotein | VIRAL PROTEIN | 07/19/18 | Schmallenberg Virus Glycoprotein Gc Head Domain in Complex with scFv 4B6 | MUS MUSCULUS; BOVINE SCHMALLENBERG VIRUS | mus musculus | mus musculus | bovine schmallenberg virus | Hellert, J., Aebischer, A., Wernike, K., Haouz, A., Brocchi, E., Reiche, S., Guardado-Calvo, P., Beer, M., Rey, F.A. | 3.168 | X-RAY DIFFRACTION | 0.228 | 0.200 | false | true | IGHV3 | IGKV10 | Kappa | null | null | null | null | null |
6yax | I | M | 0 | B | protein | null | unknown | IMMUNE SYSTEM | 03/14/20 | Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (5C05) | HOMO SAPIENS | null | null | null | Fisher, H., Tews, I., Orr, C. | 2.8 | X-RAY DIFFRACTION | 0.264 | 0.230 | false | false | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
3ld8 | C | B | 0 | A | protein | null | bifunctional arginine demethylase and lysyl-hydroxylasejmjd6 | IMMUNE SYSTEM | 01/12/10 | Structure of JMJD6 and Fab Fragments | HOMO SAPIENS; CRICETULUS MIGRATORIUS | cricetulus migratorius | cricetulus migratorius | homo sapiens | Hong, X., Zang, J., White, J., Kappler, J.W., Wang, C., Zhang, G. | 2.7 | X-RAY DIFFRACTION | 0.260 | 0.233 | false | true | IGHV3 | IGKV8 | Kappa | null | null | null | null | null |
4qhm | G | H | 0 | null | null | null | null | IMMUNE SYSTEM | 05/28/14 | I3.1 (unbound) from CH103 Lineage | HOMO SAPIENS | homo sapiens | homo sapiens | null | Fera, D., Harrison, S.C. | 3.23 | X-RAY DIFFRACTION | 0.251 | 0.224 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
7tht | H | L | 0 | C | protein | null | dh1042 light chain | VIRAL PROTEIN/IMMUNE SYSTEM | 01/12/22 | CryoEM structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1042 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Manne, K., May, A., Acharya, P. | 3.42 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4xh2 | G | I | 0 | g | peptide | null | unknown | CELL ADHESION | 01/04/15 | Crystal structure of human paxillin LD4 motif in complex with Fab fragment | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A. | 2.0 | X-RAY DIFFRACTION | 0.258 | 0.224 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -11.216609 | Unknown | null | TBD |
3utz | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 11/27/11 | Endogenous-like inhibitory antibodies targeting activated metalloproteinase motifs show therapeutic potential | MUS MUSCULUS | null | null | null | Sela-Passwell, N., Kikkeri, R, Dym, O., Rozenberg, H, Margalit, R, Arad-Yellin, R., Eisenstein, M., Brenner, O., Shoham, T., Danon, T., Shanzer, A., Sagi, I., Israel Structural Proteomics Center (ISPC) | 2.18 | X-RAY DIFFRACTION | 0.288 | 0.228 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7a0w | C | D | 0 | A | protein | null | na(+)/h(+) antiporter nhaa | MEMBRANE PROTEIN | 08/11/20 | Structure of dimeric sodium proton antiporter NhaA, at pH 8.5, crystallized with chimeric Fab antibodies | SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM STR. LT2; GALLUS GALLUS; HOMO SAPIENS | gallus gallus, homo sapiens | gallus gallus, homo sapiens | salmonella enterica subsp. enterica serovartyphimurium str. lt2 | Fippel, A., Gross, N.M., Mir, S.H., Wirth, C., Hunte, C. | 2.04 | X-RAY DIFFRACTION | 0.235 | 0.198 | false | true | unknown | unknown | unknown | null | null | null | null | null |
7p00 | H | h | 0 | A | B | G | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1,guanine nucleotide-binding protein g(s) subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | MEMBRANE PROTEIN | 06/29/21 | Human Neurokinin 1 receptor (NK1R) substance P Gq chimera (mGsqi) complex | MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | homo sapiens | Thom, C., Ehrenmann, J., Vacca, S., Waltenspuhl, Y., Schoppe, J., Medalia, O., Pluckthun, A. | 2.71 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7ls9 | E | G | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/17/21 | Cryo-EM structure of neutralizing antibody 1-57 in complex with prefusion SARS-CoV-2 spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Cerutti, G., Shapiro, L. | 3.42 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6kz0 | K | L | 0 | J | protein | null | genome polyprotein | VIRAL PROTEIN | 05/27/20 | HRV14 3C in complex with single chain antibody GGVV | HUMAN RHINOVIRUS 14; HOMO SAPIENS | homo sapiens | homo sapiens | human rhinovirus 14 | Meng, B., Yang, B., Wilson, I.A. | 2.4 | X-RAY DIFFRACTION | 0.223 | 0.185 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6dc5 | E | F | 0 | D | protein | null | rsv fusion glycoprotein | IMMUNE SYSTEM | 05/04/18 | RSV prefusion F in complex with AM22 Fab | HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human respiratory syncytial virus a (straina2), human immunodeficiency virus 1 | Jones, H.G., McLellan, J.S. | 3.5 | X-RAY DIFFRACTION | 0.280 | 0.217 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6wtu | H | I | 0 | G | protein | null | reticulocyte binding protein 2b | CELL INVASION | 05/04/20 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 273264 | PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium vivax (strain salvador i) | Chan, L.J., Dietrich, M.H., Tham, W.H. | 2.55 | X-RAY DIFFRACTION | 0.255 | 0.208 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
7ws0 | I | H | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/28/22 | Structures of Omicron Spike complexes illuminate broad-spectrum neutralizing antibody development | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Guo, H., Gao, Y., Ji, X., Yang, H. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5bop | A | null | 0 | B | protein | null | octarellin v.1 | DE NOVO PROTEIN | 05/27/15 | Crystal structure of the artificial nanobody octarellinV.1 complex | SYNTHETIC CONSTRUCT; LAMA GLAMA | lama glama | null | synthetic construct | Figueroa, M., Sleutel, M., Pardon, E., Steyaert, J., Martial, J.A., van de Weerdt, C. | 1.95 | X-RAY DIFFRACTION | 0.229 | 0.192 | false | true | IGHV1 | null | null | null | null | null | null | null |
6dwc | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/26/18 | Structure of the apo 4497 antibody Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Fong, R., Lupardus, P.J. | 2.27 | X-RAY DIFFRACTION | 0.217 | 0.184 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
6grz | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 06/13/18 | Crystal structure of the light chain dimer mH6 | HOMO SAPIENS | null | homo sapiens | null | Maritan, M., Ricagno, S., Ambrosetti, A., Oberti, L. | 2.1 | X-RAY DIFFRACTION | 0.238 | 0.206 | false | true | null | IGLV1 | Lambda | null | null | null | null | null |
7lf1 | F | H | 0 | C | protein | null | arginase-1 | HYDROLASE/IMMUNE SYSTEM | 01/15/21 | Trimeric human Arginase 1 in complex with mAb3 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Gomez-Llorente, Y., Scapin, G., Palte, R.L. | 4.04 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6pds | H | L | 0 | G | peptide | null | hiv-1 fusion peptide residue 512-519 | IMMUNE SYSTEM | 06/19/19 | Vaccine-elicited NHP FP-targeting antibody 0PV-a.04 in complex with HIV fusion peptide (residue 512-519) | MACACA MULATTA; SYNTHETIC CONSTRUCT | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Xu, K., Liu, K., Wang, Y., Kwong, P.D. | 1.893 | X-RAY DIFFRACTION | 0.220 | 0.193 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
1ub6 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 03/30/03 | Crystal structure of Antibody 19G2 with sera ligand | MUS MUSCULUS | mus musculus | mus musculus | null | Beuscher, A.B., Wirsching, P., Lerner, R.A., Janda, K., Stevens, R.C. | 2.12 | X-RAY DIFFRACTION | 0.292 | 0.264 | false | true | IGHV5 | IGKV2 | Kappa | null | null | null | null | null |
3zhk | B | null | 0 | null | null | null | null | null | 12/22/12 | The crystal structure of single domain antibody 2x1 scaffold | ESCHERICHIA COLI | null | null | null | Song, H.-N., Woo, E.-J., Lim, H.-K. | 1.962 | X-RAY DIFFRACTION | 0.2977 | 0.2528 | false | true | IGHV3 | null | null | null | null | null | null | null |
3mxw | H | L | 0 | A | protein | null | sonic hedgehog protein | SIGNALING PROTEIN | 05/07/10 | Crystal structure Sonic hedgehog bound to the 5E1 fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Hymowitz, S.G., Maun, H.R. | 1.83 | X-RAY DIFFRACTION | 0.218 | 0.176 | false | true | IGHV1 | IGKV6 | Kappa | 0 | -12.7 | ITC | 30 | 20504762 |
7ept | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | STRUCTURAL PROTEIN | 04/27/21 | Structural basis for the tethered peptide activation of adhesion GPCRs | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | homo sapiens | Ping, Y.-Q., Xiao, P., Yang, F., Zhao, R.-J., Guo, S.-C., Yan, X., Wu, X., Liebscher, I., Xu, H.E., Sun, J.-P. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
2ck0 | H | L | 0 | P | peptide | null | protein (11-mer; cyclic peptide) | IMMUNOGLOBULIN | 06/13/99 | ANTI-ANTI-IDIOTYPIC ANTIBODY AGAINST HUMAN ANGIOTENSIN II, COMPLEX WITH A SYNTHETIC CYCLIC PEPTIDE | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | synthetic construct | Pan, Y.H., Amzel, L.M. | 2.2 | X-RAY DIFFRACTION | 0.296 | 0.200 | false | false | IGHV10 | IGKV8 | Kappa | null | null | null | null | null |
5euk | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 11/18/15 | Cetuximab Fab in complex with F3H meditope variant | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.5 | X-RAY DIFFRACTION | 0.234 | 0.171 | false | true | IGHV2 | IGKV5 | Kappa | null | null | null | null | null |
5w6d | D | E | 0 | B | protein | null | bg505-sosip.v4.1-gt1-n137a gp41 | VIRAL PROTEIN/Immune System | 06/16/17 | Crystal structure of BG505-SOSIP.v4.1-GT1-N137A in complex with Fabs 35022 and 9H/109L | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Garces, F., Stanfield, R.L., Wilson, I.A. | 3.202 | X-RAY DIFFRACTION | 0.267 | 0.242 | false | true | unknown | unknown | unknown | null | null | null | null | null |
7tcc | F | G | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/23/21 | Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibodies A19-46.1 and B1-182.1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, T., Kwong, P.D. | 3.86 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1zvy | A | null | 0 | B | protein | null | lysozyme c | HYDROLASE/IMMUNE SYSTEM | 06/03/05 | Crystal structure of the VHH D3-L11 in complex with hen egg white lysozyme | CAMELUS DROMEDARIUS; GALLUS GALLUS | camelus dromedarius | null | gallus gallus | De Genst, E., Silence, K., Decanniere, K., Conrath, K., Loris, R., Kinne, J., Muyldermans, S., Wyns, L. | 1.63 | X-RAY DIFFRACTION | 0.229 | 0.209 | false | true | IGHV1 | null | null | 0 | -13.63 | SPR | null | 16537393 |
1kxq | F | null | 0 | C | protein | null | alpha-amylase, pancreatic | HYDROLASE, IMMUNE SYSTEM | 02/01/02 | Camelid VHH Domain in Complex with Porcine Pancreatic alpha-Amylase | CAMELUS DROMEDARIUS; SUS SCROFA | camelus dromedarius | null | sus scrofa | Desmyter, A., Spinelli, S., Payan, F., Lauwereys, M., Wyns, L., Muyldermans, S., Cambillau, C. | 1.6 | X-RAY DIFFRACTION | 0.219 | 0.197 | false | true | IGHV1 | null | null | 0 | -11.53 | SPR | null | 11960990 |
5vlv | A | null | 0 | null | null | null | null | UNKNOWN FUNCTION | 04/26/17 | The apo form of the triclocarban-binding single domain camelid nanobody VHH T9 | LAMA GLAMA | lama glama | null | null | Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.35 | X-RAY DIFFRACTION | 0.189 | 0.162 | false | true | IGHV1 | null | null | null | null | null | null | null |
1p4b | H | L | 0 | P | peptide | null | gcn4(7p-14p) peptide | IMMUNE SYSTEM | 04/22/03 | Three-Dimensional Structure Of a Single Chain Fv Fragment Complexed With The peptide GCN4(7P-14P). | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Zahnd, C., Spinelli, S., Luginbuhl, B., Jermutus, L., Amstutz, P., Cambillau, C., Pluckthun, A. | 2.35 | X-RAY DIFFRACTION | 0.300 | 0.219 | true | true | IGHV2 | IGLV1 | Lambda | 0 | -13.94 | SPR | 20 | 14754898 |
2a9m | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/12/05 | Structural Analysis of a Tight-binding Fluorescein-scFv; apo form | HOMO SAPIENS | homo sapiens | homo sapiens | null | Cambillau, C., Spinelli, S., Honegger, A., Pluckthun, A. | 2.1 | X-RAY DIFFRACTION | 0.263 | 0.210 | true | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
1h3p | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 09/12/02 | STRUCTURAL CHARACTERISATION OF A MONOCLONAL ANTIBODY SPECIFIC FOR THE PRES1 REGION OF THE HEPATITIS B VIRUS | MUS MUSCULUS | mus musculus | mus musculus | null | Pizarro, J.C., Vulliez-Le-normand, B., Riottot, M.M., Budkowska, A., Bentley, G.A. | 2.6 | X-RAY DIFFRACTION | 0.2908 | 0.2126 | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
4m48 | H | L | 0 | A | protein | null | transporter | TRANSPORT PROTEIN | 08/06/13 | X-ray structure of dopamine transporter elucidates antidepressant mechanism | DROSOPHILA MELANOGASTER; MUS MUSCULUS | mus musculus | mus musculus | drosophila melanogaster | Gouaux, E., Penmatsa, A., Wang, K. | 2.955 | X-RAY DIFFRACTION | 0.256 | 0.221 | false | false | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
3qpq | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/14/11 | Crystal structure of ANTI-TLR3 antibody C1068 FAB | HOMO SAPIENS, MUS MUSCULUS | homo sapiens, mus musculus | homo sapiens, mus musculus | null | Luo, J., Obmolova, G., Teplyakov, A., Gilliland, G.L. | 1.9 | X-RAY DIFFRACTION | 0.256 | 0.201 | false | true | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
6ssi | I | null | 0 | D | protein | null | cys-loop ligand-gated ion channel | TRANSPORT PROTEIN | 09/07/19 | Structure of the pentameric ligand-gated ion channel ELIC in complex with a PAM nanobody | DICKEYA CHRYSANTHEMI; LAMA GLAMA | lama glama | null | dickeya chrysanthemi | Ulens, C., Brams, M., Evans, G.L., Spurny, R., Govaerts, C., Pardon, E., Steyaert, J. | 2.59 | X-RAY DIFFRACTION | 0.246 | 0.230 | false | true | IGHV1 | null | null | null | null | null | null | null |
7oao | F | null | 0 | E | protein | null | unknown | ANTIVIRAL PROTEIN | 04/19/21 | Nanobody C5 bound to RBD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | null | null | null | Naismith, J.H., Mikolajek, H. | 1.5 | X-RAY DIFFRACTION | 0.186 | 0.152 | false | false | IGHV1 | null | null | null | null | null | null | null |
5ea0 | H | L | 0 | P | peptide | null | complement factor h-related protein 2 | IMMUNE SYSTEM | 10/15/15 | Structure of the antibody 7968 with human complement factor H-derived peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Bushey, R.T., Moody, M.A., Nicely, N.I., Alam, S.M., Haynes, B.F., Winkler, M.T., Gottlin, E.B., Campa, M.J., Liao, H.-X., Patz Jr., E.F. | 2.0 | X-RAY DIFFRACTION | 0.275 | 0.196 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
2xv6 | D | null | 0 | C | protein | null | capsid protein p24 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/22/10 | Crystal structure of the HIV-1 capsid protein C-terminal domain (146- 220) in complex with a camelid VHH. | HUMAN IMMUNODEFICIENCY VIRUS 1; VICUGNA PACOS | vicugna pacos | null | human immunodeficiency virus 1 | Igonet, S., Vaney, M.-C., Bartonova, V., Helma, J., Rothbauer, U., Leonhardt, H., Stura, E., Krausslich, H.-G., Rey, F.A. | 1.89 | X-RAY DIFFRACTION | 0.1952 | 0.1748 | false | true | IGHV1 | null | null | null | null | null | null | null |
4f15 | E | F | 0 | D | protein | null | hemagglutinin | IMMUNE SYSTEM | 05/06/12 | Molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses | INFLUENZA A VIRUS; MUS MUSCULUS | mus musculus | mus musculus | influenza a virus | Kim, K.H., Cho, K.J., Lee, J.H., Park, Y.H., Khan, T.G., Lee, J.Y., Kang, S.H., Alam, I. | 2.81 | X-RAY DIFFRACTION | 0.289 | 0.233 | false | false | IGHV3 | IGKV7 | Kappa | null | null | null | null | null |
7m1c | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/12/21 | Crystal structure of the HCMV pentamer-specific antibody 1-32 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wrapp, D., McLellan, J.S. | 2.1 | X-RAY DIFFRACTION | 0.297 | 0.268 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
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