pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7ey0 | A | B | 0 | R | protein | null | spike glycoprotein | VIRAL PROTEIN | 05/29/21 | Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-813 Fab and BD-744 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Du, S., Xiao, J. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
6q19 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/03/19 | Inferred intermediate (I-6) of the human antibody lineage 652 | HOMO SAPIENS | homo sapiens | homo sapiens | null | McCarthy, K.R., Harrison, S.C. | 1.58 | X-RAY DIFFRACTION | 0.191 | 0.164 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
3mls | H | L | 0 | P | peptide | null | rationally designed v3 mimotope | IMMUNE SYSTEM | 04/18/10 | Crystal structure of anti-HIV-1 V3 mAb 2557 Fab in complex with a HIV-1 gp120 V3 mimotope | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Kong, X.-P. | 2.5 | X-RAY DIFFRACTION | 0.274 | 0.216 | false | false | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
1axt | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 10/20/97 | IMMUNE VERSUS NATURAL SELECTION: ANTIBODY ALDOLASES WITH THE RATES OF NATURAL ENZYMES | MUS MUSCULUS | mus musculus | mus musculus | null | Heine, A., Wilson, I.A. | 2.15 | X-RAY DIFFRACTION | unknown | unknown | false | false | IGHV6 | IGKV1 | Kappa | null | null | null | null | null |
7nqk | B | null | 0 | A | protein | null | solute carrier family 15 member 2 | MEMBRANE PROTEIN | 03/01/21 | Cryo-EM structure of the mammalian peptide transporter PepT2 | RATTUS NORVEGICUS; LAMA GLAMA | lama glama | null | rattus norvegicus | Parker, J.L., Deme, J.C., Lea, S.M., Newstead, S. | 3.5 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | null | null | null | null | null | null | null |
6umj | H | L | 0 | H | Hapten | BU2 | 1,3-BUTANEDIOL | IMMUNE SYSTEM | 10/09/19 | Crystal structure of erenumab Fab-c | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Mohr, C. | 2.7 | X-RAY DIFFRACTION | 0.267 | 0.225 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
5od8 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 07/05/17 | Crystal structure of the RA-associated mAb B2 (Fab fragment) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Dobritzsch, D., Ge, C., Holmdahl, R., Amara, K., Malmstrom, V. | 2.2 | X-RAY DIFFRACTION | 0.243 | 0.200 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7vgx | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 09/19/21 | Neuropeptide Y Y1 Receptor (NPY1R) in Complex with G Protein and its endogeneous Peptide-Agonist Neuropeptide Y (NPY) | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | Park, C., Kim, J., Jeong, H., Kang, H., Bang, I., Choi, H.-J. | 3.2 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7kde | O | P | 0 | G | B | protein | protein | NA | NA | envelope glycoprotein gp120 | hiv-1 envelope glycoprotein bg505 sosip.664 gp41 | VIRAL PROTEIN/Immune System | 10/08/20 | BG505 SOSIP.664 in complex with the V3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8ANC195 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 3.55 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
3ls5 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/12/10 | Anti-tetrahydrocannabinol Fab Fragment, Free Form | MUS MUSCULUS | mus musculus | mus musculus | null | Niemi, M.H., Rouvinen, J. | 1.9 | X-RAY DIFFRACTION | 0.243 | 0.214 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
7mlu | G | J | 0 | B | protein | null | glycine receptor alpha 1 | MEMBRANE PROTEIN, SIGNALING PROTEIN | 04/29/21 | Cryo-EM reveals partially and fully assembled native glycine receptors,homomeric pentamer | RATTUS NORVEGICUS; SUS SCROFA | rattus norvegicus | rattus norvegicus | sus scrofa | Zhu, H., Gouaux, E. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
6swr | A | null | 0 | null | null | null | null | TRANSPORT PROTEIN | 09/23/19 | Crystal structure of the lysosomal potassium channel MtTMEM175 T38A mutant soaked with zinc | LAMA GLAMA; ESCHERICHIA COLI (STRAIN K12); MARIVIRGA TRACTUOSA (STRAIN ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) | lama glama, escherichia coli (strain k12) | null | null | Brunner, J.D., Jakob, R.P., Schulze, T., Neldner, Y., Moroni, A., Thiel, G., Maier, T., Schenck, S. | 3.2 | X-RAY DIFFRACTION | 0.299 | 0.269 | false | true | IGHV1 | null | null | null | null | null | null | null |
6e9q | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 05/01/19 | The crystal structure of bovine ultralong antibody BOV-6 | BOS TAURUS | bos taurus | bos taurus | null | Dong, J., Crowe, J.E. | 3.4 | X-RAY DIFFRACTION | 0.311 | 0.254 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
2xra | H | L | 0 | A | protein | null | transmembrane protein gp41 | IMMUNE SYSTEM | 09/13/10 | crystal structure of the HK20 Fab in complex with a gp41 mimetic 5- Helix | SYNTHETIC CONSTRUCT; HOMO SAPIENS | homo sapiens | homo sapiens | synthetic construct | Sabin, C., Corti, D., Buzon, V., Seaman, M.S., Lutje-Hulsik, D., Hinz, A., Vanzetta, F., Agatic, G., Silacci, C., Langedijk, J.P.M., Mainetti, L., Scarlatti, G., Sallusto, F., Weiss, R., Lanzavecchia, A., Weissenhorn, W. | 2.3 | X-RAY DIFFRACTION | 0.27943 | 0.23693 | false | false | IGHV1 | IGKV1 | Kappa | 0 | -11.56 | SPR | 25 | 21124990 |
3sqo | H | L | 0 | A | protein | null | proprotein convertase subtilisin/kexin type 9 | HYDROLASE/Immune system | 07/05/11 | PCSK9 J16 Fab complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Strop, P. | 2.7 | X-RAY DIFFRACTION | 0.283 | 0.223 | false | true | IGHV1 | IGKV1D | Kappa | 0 | -15.417363 | SPR | null | TBD |
7z1a | B | null | 0 | A | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 02/24/22 | Nanobody H11 and F2 bound to RBD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | Mikolajek, H., Naismith, J.H. | 2.59 | X-RAY DIFFRACTION | 0.241 | 0.208 | false | true | IGHV1 | null | null | null | null | null | null | null |
5wux | H | L | 0 | E | protein | null | tumor necrosis factor alpha | IMMUNE SYSTEM | 12/21/16 | TNFalpha-certolizumab Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Heo, Y.S., Lee, J.U. | 2.9 | X-RAY DIFFRACTION | 0.266 | 0.226 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -14.409486 | SPR | null | TBD |
2fed | E | F | 0 | B | protein | null | h(+)/cl(-) exchange transporter clca | PROTON TRANSPORT,MEMBRANE PROTEIN | 12/15/05 | Structure of the E203Q mutant of the Cl-/H+ exchanger CLC-ec1 from E.Coli | ESCHERICHIA COLI; HOMO SAPIENS | homo sapiens | homo sapiens | escherichia coli | Accardi, A., Walden, M.P., Nguitragool, W., Jayaram, H., Williams, C., Miller, C. | 3.317 | X-RAY DIFFRACTION | 0.287 | 0.248 | false | true | IGHV3 | IGKV6D | Kappa | null | null | null | null | null |
7lxy | E | D | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/21 | SARS-CoV-2 S/S2M11/S2X333 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7lk4 | B | A | 0 | R | protein | null | bcl-2 homologous antagonist/killer | APOPTOSIS | 02/01/21 | Crystal structure of BAK L100A in complex with activating antibody fragments | HOMO SAPIENS; RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | homo sapiens | Robin, Y.A., Colman, P.M. | 3.1 | X-RAY DIFFRACTION | 0.262 | 0.214 | false | true | IGHV5 | IGKV16 | Kappa | null | null | null | null | null |
6oyz | H | null | 0 | D | protein | null | phospho-n-acetylmuramoyl-pentapeptide-transferase | MEMBRANE PROTEIN/TRANSFERASE | 05/15/19 | Crystal structure of MraY bound to capuramycin | LAMA GLAMA; AQUIFEX AEOLICUS (STRAIN VF5) | lama glama | null | aquifex aeolicus (strain vf5) | Mashalidis, E.H., Lee, S.Y. | 3.62 | X-RAY DIFFRACTION | 0.301 | 0.277 | false | true | IGHV1 | null | null | null | null | null | null | null |
5w23 | J | N | 0 | A | protein | null | fusion glycoprotein f0 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/05/17 | Crystal Structure of RSV F in complex with 5C4 Fab | HUMAN RESPIRATORY SYNCYTIAL VIRUS A; MUS MUSCULUS | mus musculus | mus musculus | human respiratory syncytial virus a | Battles, M.B., McLellan, J.S. | 3.4 | X-RAY DIFFRACTION | 0.239 | 0.198 | false | true | IGHV14 | IGKV3 | Kappa | null | null | null | null | null |
7kmh | A | B | 0 | C | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 11/02/20 | LY-CoV488 neutralizing antibody against SARS-CoV-2 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Hendle, J., Pustilnik, A., Sauder, J.M., Boyles, J.S., Dickinson, C.D., Coleman, K.A. | 1.72 | X-RAY DIFFRACTION | 0.242 | 0.194 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4xnm | B | A | 0 | D | protein | null | hemagglutinin | Viral protein/Immune system | 01/15/15 | Antibody Influenza H5 Complex | HOMO SAPIENS; INFLUENZA A VIRUS | homo sapiens | homo sapiens | influenza a virus | Winarski, K.L., Spiler, B.W. | 2.51 | X-RAY DIFFRACTION | 0.241 | 0.214 | false | true | IGHV4 | IGLV3 | Lambda | 0 | -11.046162 | SPR | null | TBD |
6axk | A | B | 0 | E | peptide | null | ace-asn-pro-asn-ala-asn-pro-asn-ala-asn-pro-asn | IMMUNE SYSTEM | 09/07/17 | Crystal structure of Fab311 complex | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Oyen, D., Wilson, I.A. | 2.103 | X-RAY DIFFRACTION | 0.236 | 0.204 | false | true | IGHV3 | IGLV1 | Lambda | 0 | -8.889005 | Unknown | null | TBD |
7nx6 | H | L | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/17/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and EY6A Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D. | 2.25 | X-RAY DIFFRACTION | 0.248 | 0.207 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7wka | a | b | 0 | B | protein | null | light chain of s3h3 fab | VIRAL PROTEIN | 01/08/22 | SARS-CoV-2 Omicron closed state spike protein in complex with S3H3 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Hong, Q., Cong, Y. | 3.64 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6svl | D | E | 0 | F | protein | null | myeloid-derived growth factor | CYTOKINE | 09/18/19 | human Myeloid-derived growth factor (MYDGF) in complex with neutralizing Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ebenhoch, R., Nar, H. | 1.58 | X-RAY DIFFRACTION | 0.206 | 0.181 | false | true | IGHV14 | IGKV12 | Kappa | null | null | null | null | null |
7x7e | A | null | 0 | D | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/09/22 | SARS-CoV-2 RBD and Nb22 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA | lama | null | severe acute respiratory syndrome coronavirus2 | Wang, Y., Ye, S. | 2.67 | X-RAY DIFFRACTION | 0.250 | 0.205 | false | true | IGHV1 | null | null | null | null | null | null | null |
5hm1 | C | null | 0 | F | peptide | null | gp41 | IMMUNE SYSTEM | 01/15/16 | Llama VHH 2E7 in complex with gp41 | LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | hiv-1 m | Hock, M., Caillat, C., Haffke, M., Weissenhorn, W. | 2.962 | X-RAY DIFFRACTION | 0.249 | 0.194 | false | true | IGHV1 | null | null | null | null | null | null | null |
7rbt | N | null | 0 | A | B | protein | protein | NA | NA | isoform gnas-2 of guanine nucleotide-binding protein g(s)subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 07/06/21 | cryo-EM structure of human Gastric inhibitory polypeptide receptor GIPR bound to tirzepatide | HOMO SAPIENS; MUS MUSCULUS; LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | homo sapiens | homo sapiens | Sun, B., Kobilka, B.K., Sloop, K.W., Feng, D., Kobilka, T.S. | 3.08 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
4m93 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/14/13 | Unliganded 2 crystal structure of S25-26 Fab | MUS MUSCULUS | mus musculus | mus musculus | null | Haji-Ghassemi, O., Evans, S.V. | 2.09 | X-RAY DIFFRACTION | 0.251 | 0.218 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
5d1x | B | A | 0 | E | protein | null | iron-regulated surface determinant protein b | IMMUNE SYSTEM | 08/04/15 | IsdB NEAT2 bound by D4-30 | HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN USA300) | homo sapiens | homo sapiens | staphylococcus aureus (strain usa300) | Deng, X. | 3.21 | X-RAY DIFFRACTION | 0.310 | 0.269 | false | true | unknown | IGKV2 | Kappa | 0 | -14.567099 | SPR | null | TBD |
7r63 | C | null | 0 | null | null | null | null | IMMUNE SYSTEM | 06/22/21 | Nb82, a nanobody against voltage gated sodium channels Nav1.4 and Nav1.5 | LAMA GLAMA | lama glama | null | null | Srinivasan, L., Gabelli, S.B. | 2.0 | X-RAY DIFFRACTION | 0.244 | 0.184 | false | true | IGHV1 | null | null | null | null | null | null | null |
7a5r | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/21/20 | Complex of SARS-CoV-2 spike and CR3022 Fab (Non-Uniform Refinement) | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wrobel, A.G., Benton, D.J., Rosenthal, P.B., Gamblin, S.J. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
1fbi | Q | P | 0 | Y | protein | null | guinea fowl lysozyme | COMPLEX (ANTIBODY/ANTIGEN) | 01/19/95 | CRYSTAL STRUCTURE OF A CROSS-REACTION COMPLEX BETWEEN FAB F9.13.7 AND GUINEA-FOWL LYSOZYME | MUS MUSCULUS; NUMIDA MELEAGRIS | mus musculus | mus musculus | numida meleagris | Lescar, J., Alzari, P.M. | 3.0 | X-RAY DIFFRACTION | unknown | 0.190 | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
6v7z | E | null | 0 | C | D | protein | protein | NA | NA | antigen-presenting glycoprotein cd1d | beta-2-microglobulin | IMMUNE SYSTEM | 12/10/19 | Human CD1d presenting alpha-Galactosylceramide in complex with VHH nanobody 1D22 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | homo sapiens | Shahine, A., Rossjohn, J. | 2.75 | X-RAY DIFFRACTION | 0.252 | 0.186 | false | true | IGHV1 | null | null | null | null | null | null | null |
3j30 | H | G | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab CHK152 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
2jk5 | A | B | 0 | C | protein | null | voltage-gated potassium channel | IMMUNE SYSTEM/METAL TRANSPORT | 08/15/08 | Potassium Channel KcsA in complex with Tetrabutylammonium in high K | MUS MUSCULUS; STREPTOMYCES LIVIDANS | mus musculus | mus musculus | streptomyces lividans | Lenaeus, M.J., Focia, P.J., Wagner, T., Gross, A. | 2.4 | X-RAY DIFFRACTION | 0.249 | 0.202 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
7f3q | C | B | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/16/21 | SARS-CoV-2 RBD in complex with A5-10 Fab and A34-2 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Dou, Y., Wang, X., Liu, P., Lu, B., Wang, K. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6zxn | E | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/30/20 | Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing nanobodies (Ty1) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 2.93 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
3h0t | B | A | 0 | C | peptide | null | hepcidin | IMMUNE SYSTEM/Antimicrobial Protein | 04/10/09 | Hepcidin-Fab complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Syed, R., Li, V. | 1.89 | X-RAY DIFFRACTION | 0.251 | 0.202 | false | true | IGHV6 | IGLV6 | Lambda | null | null | null | null | null |
6p65 | H | L | 0 | A | protein | null | hiv env 16055 nfl td 2cc+ | VIRAL PROTEIN/immune system | 05/31/19 | HIV Env 16055 NFL TD 2CC+ in complex with antibody 1C2 fragment antigen binding | HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | Ozorowski, G., Torres, J.L., Ward, A.B. | 3.94 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1g9e | A | null | 7 | null | null | null | null | IMMUNE SYSTEM | 11/23/00 | SOLUTION STRUCTURE AND RELAXATION MEASUREMENTS OF AN ANTIGEN-FREE HEAVY CHAIN VARIABLE DOMAIN (VHH) FROM LLAMA | LAMA GLAMA | lama glama | null | null | Renisio, J.-G., Perez, J., Czisch, M., Guenneugues, M., Bornet, O., Frenken, L., Cambillau, C., Darbon, H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7kzc | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/10/20 | Potent SARS-CoV-2 binding and neutralization through maturation of iconic SARS-CoV-1antibodies | HOMO SAPIENS | homo sapiens | homo sapiens | null | Langley, D.B., Christ, D. | 2.3 | X-RAY DIFFRACTION | 0.257 | 0.212 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
6vlr | D | K | 0 | H | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/24/20 | BG505 SOSIP.v5.2 in complex with rhesus macaque Fab RM20E1 and PGT122 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; MACACA MULATTA | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Cottrell, C.A., Ward, A.B. | 4.42 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
4ubd | K | L | 0 | J | E | protein | protein | NA | NA | hemagglutinin ha2 chain | hemagglutinin ha1 chain | viral protein/immune system | 08/12/14 | Crystal structure of a neutralizing human monoclonal antibody with 1968 H3 HA | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Shore, D.A., Yang, H., Cho, M., Donis, R.O., Stevens, J. | 3.5 | X-RAY DIFFRACTION | 0.258 | 0.212 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6mee | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 09/06/18 | Broadly neutralizing antibodies against HCV use a CDRH3 disulfide motif to recognize an E2 glycoprotein site that can be targeted for vaccine design | HOMO SAPIENS | homo sapiens | homo sapiens | null | Flyak, A.I., Bjorkman, P.J. | 1.36 | X-RAY DIFFRACTION | 0.191 | 0.167 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4jkp | H | L | 0 | G | protein | null | gp120 | viral protein/immune system | 03/11/13 | Restricting HIV-1 Pathways for Escape using Rationally-Designed Anti-HIV-1 Antibodies | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Diskin, R., Bjorkman, P.J. | 2.82 | X-RAY DIFFRACTION | 0.231 | 0.193 | false | true | unknown | IGKV3 | Kappa | 0 | -9.948654 | SPR | null | TBD |
3vfg | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/09/12 | Crystal structure of monoclonal anitbody 3F8 Fab fragment that binds to GD2 ganglioside | MUS MUSCULUS | mus musculus | mus musculus | null | Ahmed, M., Goldgur, Y., Cheung, N.-K. | 1.65 | X-RAY DIFFRACTION | 0.225 | 0.176 | false | true | IGHV2 | IGKV6 | Kappa | null | null | null | null | null |
4qo1 | A | null | 0 | B | protein | null | cellular tumor antigen p53 | Apoptosis, transcription | 06/19/14 | p53 DNA binding domain in complex with Nb139 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | De Gieter, S., Bethuyne, J., Gettemans, J., Garcia-Pino, A., Loris, R. | 1.924 | X-RAY DIFFRACTION | 0.205 | 0.165 | false | true | IGHV1 | null | null | null | null | null | null | null |
6nfn | F | E | 0 | E | Hapten | BCG | 3-(BENZOYLOXY)-8-METHYL-8-AZABICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID | IMMUNE SYSTEM | 12/20/18 | Fab fragement of anti-cocaine antibody h2E2 bound to benzoylecgonine | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Pokkuluri, P.R., Tan, K. | 2.63 | X-RAY DIFFRACTION | 0.244 | 0.185 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
4xbe | H | L | 0 | P | peptide | null | peptide fragment of hiv glycoprotein (gp41) including theregion 671-683 of the mper | IMMUNE SYSTEM | 12/16/14 | Crystal structure of human 4E10 Fab in complex with its peptide epitope on HIV-1 gp41: crystals cryoprotected with sphingomyelin (02:0 SM (d18:1/2:0)). | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Irimia, A., Stanfield, R.L., Wilson, I.A. | 1.756 | X-RAY DIFFRACTION | 0.197 | 0.150 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4hwe | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/07/12 | Crystal structure of ectodomain 3 of the IL-13 receptor alpha1 in complex with a human neutralizing monoclonal antibody fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Xu, Y. | 2.43 | X-RAY DIFFRACTION | 0.223 | 0.175 | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
7teq | H | L | 0 | B | A | protein | protein | NA | NA | glutamate receptor ionotropic, nmda 2b | glutamate receptor ionotropic, nmda 1 | SIGNALING PROTEIN/IMMUNE SYSTEM | 01/05/22 | Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 active conformation | RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | rattus norvegicus | Tajima, N., Furukawa, H. | 7.51 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
6ele | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/28/17 | FAB Fragment. AbVance: Increasing our knowledge of antibody structural space to enable faster and better decision making in antibody drug discovery | HOMO SAPIENS | homo sapiens | homo sapiens | null | Benz, J., Weigand, S., Dengl, S., Schlothauer, T., Auer, J., Ehler, A., Kettenberger, H., Lorenz, S., Hirschheydt, T., Georges, G. | 1.78 | X-RAY DIFFRACTION | 0.218 | 0.190 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
6cxg | M | K | 0 | C | peptide | null | 10v1s glycopeptide | IMMUNE SYSTEM | 04/03/18 | anti-HIV-1 Fab 2G12 in complex with glycopeptide 10V1S | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Stanfield, R.L., Wilson, I.A. | 2.298 | X-RAY DIFFRACTION | 0.237 | 0.197 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
2kh2 | B | b | 14 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5gs0 | D | C | 0 | A | protein | null | toll-like receptor 3 | IMMUNE SYSTEM | 08/13/16 | Crystal structure of the complex of TLR3 and bi-specific diabody | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Kim, J.H., Song, D.H., Youn, S.J., Kim, J.W., Cho, G., Lee, H., Lee, J.O. | 3.275 | X-RAY DIFFRACTION | 0.248 | 0.192 | false | true | IGHV6 | IGLV3 | Lambda | null | null | null | null | null |
2ny5 | H | L | 0 | G | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/20/06 | HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, I109C, T257S, V275C, S334A, S375W, Q428C, A433M) Complexed with CD4 and Antibody 17b | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Xu, L., Dey, B., Hessell, A.J., Van Ryk, D., Xiang, S.H., Yang, X., Zhang, M.Y., Zwick, M.B., Arthos, J., Burton, D.R., Dimitrov, D.S., Sodroski, J., Wyatt, R., Nabel, G.J., Kwong, P.D. | 2.5 | X-RAY DIFFRACTION | 0.255 | 0.198 | false | true | IGHV1 | IGKV3 | Kappa | 0 | null | SPR | null | 17301785 |
4zpt | H | L | 0 | S | protein | null | spike glycoprotein | Viral protein/Immune system | 05/08/15 | Structure of MERS-Coronavirus Spike Receptor-binding Domain (England1 Strain) in Complex with Vaccine-Elicited Murine Neutralizing Antibody D12 (Crystal Form 1) | HUMAN CORONAVIRUS EMC (ISOLATE UNITED KINGDOM/H123990006/2012); MUS MUSCULUS | mus musculus | mus musculus | human coronavirus emc (isolate unitedkingdom/h123990006/2012) | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 2.591 | X-RAY DIFFRACTION | 0.244 | 0.204 | false | false | IGHV5 | IGKV10 | Kappa | 0 | -10.918115 | BLI | null | TBD |
5gzn | C | D | 0 | B | G | protein | protein | NA | NA | genome polyprotein | genome polyprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/29/16 | Structure of neutralizing antibody bound to Zika envelope protein | ZIKA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | zika virus | zika virus | Wang, Q., Yang, H., Liu, X., Dai, L., Ma, T., Qi, J., Wong, G., Peng, R., Liu, S., Li, J., Li, S., Song, J., Liu, J., He, J., Yuan, H., Xiong, Y., Liao, Y., Li, J., Yang, J., Tong, Z., Griffin, B., Bi, Y., Liang, M., Xu, X., Cheng, G., Wang, P., Qiu, X., Kobinger, G., Shi, Y., Yan, J., Gao, G.F. | 3.0 | X-RAY DIFFRACTION | 0.258 | 0.223 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
5gs0 | F | E | 0 | B | protein | null | toll-like receptor 3 | IMMUNE SYSTEM | 08/13/16 | Crystal structure of the complex of TLR3 and bi-specific diabody | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Kim, J.H., Song, D.H., Youn, S.J., Kim, J.W., Cho, G., Lee, H., Lee, J.O. | 3.275 | X-RAY DIFFRACTION | 0.248 | 0.192 | false | true | IGHV6 | IGLV3 | Lambda | null | null | null | null | null |
2ypv | H | L | 0 | A | protein | null | lipoprotein | IMMUNE SYSTEM | 11/01/12 | Crystal structure of the Meningococcal vaccine antigen factor H binding protein in complex with a bactericidal antibody | NEISSERIA MENINGITIDIS MC58; MUS MUSCULUS | mus musculus | mus musculus | neisseria meningitidis mc58 | Malito, E., Veggi, D., Bottomley, M.J. | 1.8 | X-RAY DIFFRACTION | 0.2246 | 0.1812 | false | false | IGHV1 | IGKV14 | Kappa | 0 | -14.355775 | SPR | null | TBD |
4llw | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 07/09/13 | Crystal structure of Pertuzumab Clambda Fab with variable domain redesign (VRD2) at 1.95A | HOMO SAPIENS | homo sapiens | homo sapiens | null | Pustilnik, A., Lewis, S.M., Wu, X., Sereno, A., Huang, F., Guntas, G., Leaver-Fay, A., Smith, E.M., Ho, C., Hansen-Estruch, C., Chamberlain, A.K., Truhlar, S.M., Kuhlman, B., Demarest, S.J., Atwell, S. | 1.95 | X-RAY DIFFRACTION | 0.262 | 0.209 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5if0 | A | B | 0 | I | protein | null | germline-targeting hiv-1 gp120 engineered outer domain eod-gt8 | IMMUNE SYSTEM/VIRAL PROTEIN | 02/25/16 | Crystal structure of VRC01c-HuGL2 Fab from an HIV-1 naive donor in complex with with a germline-targeting gp120 engineered outer domain eOD-GT8 at 2.44 A | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Sarkar, A., Wilson, I.A. | 2.44 | X-RAY DIFFRACTION | 0.232 | 0.191 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
5iie | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/01/16 | STRUCTURE OF THE UNLIGANDED ANTI-HIV ANTIBODY DH501 THAT BINDS GP120 V3 GLYCAN AND THE BASE OF V3 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Nicely, N.I., Haynes, B.F. | 2.8 | X-RAY DIFFRACTION | 0.273 | 0.206 | false | true | IGHV2 | IGLV1 | Lambda | null | null | null | null | null |
4xgz | S | T | 0 | s | peptide | null | unknown | CELL ADHESION | 01/04/15 | Crystal structure of human paxillin LD2 motif in complex with Fab fragment | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A. | 2.5 | X-RAY DIFFRACTION | 0.245 | 0.228 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -10.395252 | Unknown | null | TBD |
7a0w | E | F | 0 | B | protein | null | na(+)/h(+) antiporter nhaa | MEMBRANE PROTEIN | 08/11/20 | Structure of dimeric sodium proton antiporter NhaA, at pH 8.5, crystallized with chimeric Fab antibodies | SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM STR. LT2; GALLUS GALLUS; HOMO SAPIENS | gallus gallus, homo sapiens | gallus gallus, homo sapiens | salmonella enterica subsp. enterica serovartyphimurium str. lt2 | Fippel, A., Gross, N.M., Mir, S.H., Wirth, C., Hunte, C. | 2.04 | X-RAY DIFFRACTION | 0.235 | 0.198 | false | true | unknown | unknown | unknown | null | null | null | null | null |
5ezl | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 11/26/15 | Crystal Structure of Fab c12 | MUS MUSCULUS | mus musculus | mus musculus | null | Favuzza, P., Pluschke, G., Rudolph, M.G. | 2.43 | X-RAY DIFFRACTION | 0.245 | 0.187 | false | true | IGHV4 | IGKV6 | Kappa | null | null | null | null | null |
7ns6 | O | null | 0 | N | protein | null | spike glycoprotein,fibritin | VIRAL PROTEIN | 03/05/21 | SARS-CoV-2 Spike (dimers) in complex with six Fu2 nanobodies | VICUGNA PACOS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; ENTEROBACTERIA PHAGE T4 | vicugna pacos | null | severe acute respiratory syndrome coronavirus2, enterobacteria phage t4 | Das, H., Hallberg, B.M. | 3.18 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6pk8 | D | d | 0 | null | null | null | null | IMMUNE SYSTEM | 06/28/19 | Antibody scFv-M204 dimeric state | ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | null | null | Abskharon, R., Sawaya, M.R., Seidler, P.M., Cascio, D., Eisenberg, D.S. | 2.91 | X-RAY DIFFRACTION | 0.238 | 0.186 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6tyl | I | null | 0 | F | protein | null | resistance to inhibitors of cholinesterase 8 homolog a (c.elegans) | SIGNALING PROTEIN | 08/09/19 | Crystal structure of mammalian Ric-8A:Galpha(i):nanobody complex | RATTUS NORVEGICUS; LAMA GLAMA | lama glama | null | rattus norvegicus | Mou, T.C., McClelland, L., Yates-Hansen, C., Sprang, S.R. | 3.3 | X-RAY DIFFRACTION | 0.287 | 0.248 | false | true | IGHV1 | null | null | null | null | null | null | null |
7pgb | a | b | 0 | d | protein | null | unknown | MEMBRANE PROTEIN | 08/13/21 | NaV_Ae1/Sp1CTD_pore-SAT09 complex | HOMO SAPIENS; ALKALILIMNICOLA EHRLICHII (STRAIN ATCC BAA-1101 / DSM 17681 / MLHE-1); RUEGERIA POMEROYI (STRAIN ATCC 700808 / DSM 15171 / DSS-3) | homo sapiens | homo sapiens | alkalilimnicola ehrlichii (strain atcc baa-1101/ dsm 17681 / mlhe-1), ruegeria pomeroyi (strain atcc 700808 / dsm 15171 / dss-3) | Lolicato, M., Arrigoni, C. | 3.6 | X-RAY DIFFRACTION | 0.232 | 0.207 | false | false | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6avq | H | L | 0 | B | A | protein | protein | NA | NA | integrin beta-3 | integrin alpha-v | SIGNALING PROTEIN | 09/04/17 | The Therapeutic Antibody LM609 Selectively Inhibits Ligand Binding to Human alpha-V beta-3 Integrin via Steric Hindrance | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | Borst, A.J., James, Z.N., Zagotta, W.N., Ginsberg, M., Rey, F.A., DiMaio, F., Backovic, M., Veesler, D. | 35 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV5 | Kappa | null | null | null | null | null |
2w9d | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/23/09 | Structure of Fab fragment of the ICSM 18 - anti-Prp therapeutic antibody at 1.65 A resolution. | MUS MUSCULUS | mus musculus | mus musculus | null | Antonyuk, S.V., Trevitt, C.R., Strange, R.W., Jackson, G.S., Sangar, D., Batchelor, M., Jones, S., Georgiou, T., Cooper, S., Fraser, C., Khalili-Shirazi, A., Clarke, A.R., Hasnain, S.S., Collinge, J. | 1.57 | X-RAY DIFFRACTION | 0.217 | 0.184 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7nkc | F | null | 0 | null | null | null | null | VIRAL PROTEIN | 02/17/21 | 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8207 | INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)); INFLUENZA A VIRUS (STRAIN A/BREVIG MISSION/1/1918 H1N1); CAMELIDAE MIXED LIBRARY; SYNTHETIC CONSTRUCT | camelidae mixed library | null | null | Keown, J.R., Carrique, L., Fodor, E., Grimes, J.M. | 4.46 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4etq | A | B | 0 | X | protein | null | imv membrane protein | IMMUNE SYSTEM/VIRAL PROTEIN | 04/24/12 | Vaccinia virus D8L IMV envelope protein in complex with Fab of murine IgG2a LA5 | MUS MUSCULUS; VACCINIA VIRUS | mus musculus | mus musculus | vaccinia virus | Matho, M.H., Zajonc, D.M. | 2.1 | X-RAY DIFFRACTION | 0.252 | 0.202 | false | true | IGHV1 | IGKV4 | Kappa | 0 | -13.294187 | SPR | null | TBD |
5i1a | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/05/16 | CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV3-23/IGKV3-11 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Teplyakov, A., Obmolova, G., Malia, T., Luo, J., Gilliland, G. | 2.0 | X-RAY DIFFRACTION | 0.255 | 0.206 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6h3u | H | L | 0 | B | protein | null | envelopment polyprotein | VIRAL PROTEIN | 07/19/18 | Schmallenberg Virus Glycoprotein Gc Head Domain in Complex with scFv 4B6 | MUS MUSCULUS; BOVINE SCHMALLENBERG VIRUS | mus musculus | mus musculus | bovine schmallenberg virus | Hellert, J., Aebischer, A., Wernike, K., Haouz, A., Brocchi, E., Reiche, S., Guardado-Calvo, P., Beer, M., Rey, F.A. | 3.168 | X-RAY DIFFRACTION | 0.228 | 0.200 | false | true | IGHV3 | IGKV10 | Kappa | null | null | null | null | null |
7kpb | H | L | 0 | A | C | protein | protein | NA | NA | tumor necrosis factor | tumor necrosis factor | CYTOKINE/Immune System | 11/10/20 | asymmetric hTNF-alpha | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | Fox III, D., Conrady, D.G., Lowe, M., Ceska, T. | 3.0 | X-RAY DIFFRACTION | 0.256 | 0.223 | false | true | IGHV5 | IGKV12 | Kappa | null | null | null | null | null |
3naa | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/01/10 | Crystal structure of Fab15 Mut5 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Luo, J., Feng, Y., Gilliland, G.L. | 1.7 | X-RAY DIFFRACTION | 0.200 | 0.178 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
5vm0 | A | null | 0 | A | Hapten | 9EG | N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea | UNKNOWN FUNCTION | 04/26/17 | The hapten triclocarban bound to the single domain camelid nanobody VHH T9 | LAMA GLAMA | lama glama | null | lama glama | Wogulis, L.A., Wogulis, M.D., Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.79 | X-RAY DIFFRACTION | 0.242 | 0.204 | false | true | IGHV1 | null | null | 0 | -11.999727 | Unknown | null | TBD |
6rlm | O | P | 0 | null | null | null | null | IMMUNE SYSTEM | 05/02/19 | Crystal structure of AT1412dm Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Neviani, V., Pearce, N.M., Pos, W., Schotte, R., Spits, H., Gros, P. | 2.5 | X-RAY DIFFRACTION | 0.267 | 0.242 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
4aix | null | D | 0 | null | null | null | null | IMMUNE SYSTEM | 02/15/12 | Crystallographic structure of an amyloidogenic variant, 3rC34Y, of the germinal line lambda 3 | HOMO SAPIENS | null | homo sapiens | null | Villalba, M.I., Luna, O.D., Rudino-Pinera, E., Sanchez, R., Sanchez-Lopez, R., Rojas-Trejo, S., Olamendi-Portugal, T., Fernandez-Velasco, D.A., Becerril, B. | 1.8 | X-RAY DIFFRACTION | 0.2119 | 0.1684 | false | true | null | IGLV3 | Lambda | null | null | null | null | null |
7dq7 | H | L | 0 | B | protein | null | vp2 | VIRUS/IMMUNE SYSTEM | 12/22/20 | Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 5F5 | COXSACKIEVIRUS B1; MUS MUSCULUS | mus musculus | mus musculus | coxsackievirus b1 | Li, S., Zhu, R., Xu, L., Cheng, T., Zheng, Q. | 3.2 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7eyc | A | B | 0 | Q | peptide | null | acetylated tau peptide | IMMUNE SYSTEM | 05/30/21 | Crystal structure of Tau and acetylated tau peptide antigen | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | synthetic construct | Hong, M., Park, J. | 2.49 | X-RAY DIFFRACTION | 0.245 | 0.192 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
5gry | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 08/12/16 | Crystal structure of disulfide-bonded diabody | HOMO SAPIENS | homo sapiens | null | null | Kim, J.H., Song, D.H., Youn, S.J., Kim, J.W., Cho, G., Lee, H., Lee, J.O. | 1.639 | X-RAY DIFFRACTION | 0.231 | 0.198 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7xic | H | I | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 04/12/22 | S-ECD (Omicron) in complex with STS165 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Li, Y.N., Shen, Y.P., Zhang, Y.Y., Yan, R.H. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
1gc1 | H | L | 0 | G | protein | null | envelope protein gp120 | VIRAL PROTEIN/RECEPTOR/IMMUNE SYSTEM | 06/15/98 | HIV-1 GP120 CORE COMPLEXED WITH CD4 AND A NEUTRALIZING HUMAN ANTIBODY | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kwong, P.D., Wyatt, R., Robinson, J., Sweet, R.W., Sodroski, J., Hendrickson, W.A. | 2.5 | X-RAY DIFFRACTION | 0.302 | 0.210 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3fo0 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/27/08 | Crystal structure of hapten complex of catalytic elimination antibody 13G5 (wild-type) | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Debler, E.W., Wilson, I.A. | 2.5 | X-RAY DIFFRACTION | 0.277 | 0.219 | false | true | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
3zdz | E | F | 0 | C | protein | null | integrin alpha-iib | CELL ADHESION/IMMUNE SYSTEM/PEPTIDE | 12/03/12 | Integrin alphaIIB beta3 headpiece and RGD peptide complex | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Zhu, J.H., Zhu, J.Q., Springer, T.A. | 2.75 | X-RAY DIFFRACTION | 0.2211 | 0.1844 | false | true | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
2kqm | null | B | 6 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
5o8f | N | null | 0 | I | D | carbohydrate | protein | NAG | NA | N-ACETYL-D-GLUCOSAMINE | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 06/13/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 and pregnanolone | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.2 | X-RAY DIFFRACTION | 0.242 | 0.232 | false | true | IGHV1 | null | null | null | null | null | null | null |
4ouu | H | L | 0 | null | null | null | null | HYDROLASE | 02/19/14 | anti-MT1-MMP monoclonal antibody | MUS MUSCULUS | mus musculus | mus musculus | null | Udi, Y., Grossman, M., Solomonov, I., Dym, O., Rozenberg, H., Koziol, A., Cuniasse, P., Dive, V., Arroyo, A.G., Irit, S., Israel Structural Proteomics Center (ISPC) | 2.6 | X-RAY DIFFRACTION | 0.253 | 0.197 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
6e9u | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 08/01/18 | The crystal structure of bovine ultralong antibody BOV-7 | BOS TAURUS | bos taurus | bos taurus | null | Dong, J., Crowe, J.E. | 2.295 | X-RAY DIFFRACTION | 0.257 | 0.214 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7n0i | L | null | 0 | G | H | protein | protein | NA | NA | nucleoprotein | nucleoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/25/21 | Structure of the SARS-CoV-2 N protein C-terminal domain bound to single-domain antibody E2 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Ye, Q., Corbett, K.D. | 2.2 | X-RAY DIFFRACTION | 0.271 | 0.239 | false | true | IGHV1 | null | null | null | null | null | null | null |
5o04 | D | null | 0 | B | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-26 and Nano-85 | NORWALK VIRUS; VICUGNA PACOS | vicugna pacos | null | norwalk virus | Koromyslova, A.D., Hansman, A.D. | 2.3 | X-RAY DIFFRACTION | 0.242 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null |
7cr5 | H | L | 0 | A | protein | null | nucleoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/12/20 | Complex structure of a human monoclonal antibody with SARS-CoV-2 nucleocapsid protein NTD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Chen, S., Kang, S. | 2.08 | X-RAY DIFFRACTION | 0.222 | 0.191 | false | true | IGHV3 | IGLV4 | Lambda | null | null | null | null | null |
6p60 | J | K | 0 | L | peptide | null | hiv fusion peptide residue 512-519 | IMMUNE SYSTEM | 06/03/20 | Vaccine-elicited NHP FP-targeting neutralizing antibody A12V163-a.02 in complex with HIV fusion peptide (residue 512-519) | PLATYRRHINI; SYNTHETIC CONSTRUCT | platyrrhini | platyrrhini | human immunodeficiency virus 1 | Xu, K., Liu, K., Kwong, P.D. | 2.498 | X-RAY DIFFRACTION | 0.209 | 0.197 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
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