pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7n5h | J | K | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/05/21 | Cryo-EM structure of broadly neutralizing antibody 2-36 in complex with prefusion SARS-CoV-2 spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Casner, R.G., Cerutti, G., Shapiro, L. | 3.24 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
2ipu | H | L | 0 | Q | peptide | null | abeta 1-8 peptide | IMMUNE SYSTEM | 10/12/06 | PFA1 Fab fragment complexed with Abeta 1-8 peptide | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Gardberg, A.S., Dealwis, C. | 1.65 | X-RAY DIFFRACTION | 0.225 | 0.182 | false | false | IGHV8 | IGKV1 | Kappa | null | null | null | null | null |
5d1x | C | D | 0 | E | protein | null | iron-regulated surface determinant protein b | IMMUNE SYSTEM | 08/04/15 | IsdB NEAT2 bound by D4-30 | HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN USA300) | homo sapiens | homo sapiens | staphylococcus aureus (strain usa300) | Deng, X. | 3.21 | X-RAY DIFFRACTION | 0.310 | 0.269 | false | true | IGHV3 | IGKV3 | Kappa | 0 | -14.567099 | SPR | null | TBD |
7tyv | D | E | 0 | A | a | protein | protein | NA | NA | glycoprotein g2 | unknown | VIRAL PROTEIN/IMMUNE SYSTEM | 02/14/22 | Structure of Lassa Virus glycoprotein (Josiah) bound to Fab 25.10C | LASSA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | lassa virus | lassa virus | Enriquez, A.S., Hastie, K.M. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2qsc | H | L | 0 | P | peptide | null | envelope glycoprotein gp120 | immune system | 07/30/07 | Crystal structure analysis of anti-HIV-1 V3-Fab F425-B4e8 in complex with a V3-peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Bell, C.H., Schiefner, A., Stanfield, R.L., Wilson, I.A. | 2.8 | X-RAY DIFFRACTION | 0.264 | 0.219 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3oaz | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/06/10 | A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity | HOMO SAPIENS | homo sapiens | homo sapiens | null | Doores, K.J., Fulton, Z., Hong, V., Patel, M.K., Scanlan, C.N., Wormald, M.R., Finn, M.G., Burton, D.R., Wilson, I.A., Davis, B.G | 1.75 | X-RAY DIFFRACTION | 0.217 | 0.176 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5wob | I | J | 0 | A | protein | null | insulin | HYDROLASE | 08/01/17 | Crystal Structure Analysis of Fab1-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin | HOMO SAPIENS; MUS MUSCULOIDES | mus musculoides | mus musculoides | homo sapiens | McCord, L.A., Liang, W.G., Farcasanu, M., Wang, A.G., Koide, S., Tang, W.J. | 3.95 | X-RAY DIFFRACTION | 0.291 | 0.243 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6cdm | A | B | 0 | C | peptide | null | hiv fusion peptide (512-519) | IMMUNE SYSTEM | 02/08/18 | Structure of vaccine-elicited HIV-1 neutralizing antibody vFP7.04 in complex with HIV-1 fusion peptide residue 512-519 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Xu, K., Liu, K., Kwong, P.D. | 2.408 | X-RAY DIFFRACTION | 0.222 | 0.184 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -12.406714 | Unknown | null | TBD |
3jbf | 7 | null | 0 | 3 | protein | null | capsid protein vp3 | VIRUS/IMMUNE SYSTEM | 08/26/15 | Complex of poliovirus with VHH PVSP19B | CAMELUS DROMEDARIUS; HUMAN POLIOVIRUS 1 MAHONEY | camelus dromedarius | null | human poliovirus 1 mahoney | Strauss, M., Schotte, L., Thys, B., Filman, D.J., Hogle, J.M. | 4.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
2xv6 | B | null | 0 | A | protein | null | capsid protein p24 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/22/10 | Crystal structure of the HIV-1 capsid protein C-terminal domain (146- 220) in complex with a camelid VHH. | HUMAN IMMUNODEFICIENCY VIRUS 1; VICUGNA PACOS | vicugna pacos | null | human immunodeficiency virus 1 | Igonet, S., Vaney, M.-C., Bartonova, V., Helma, J., Rothbauer, U., Leonhardt, H., Stura, E., Krausslich, H.-G., Rey, F.A. | 1.89 | X-RAY DIFFRACTION | 0.1952 | 0.1748 | false | true | IGHV1 | null | null | null | null | null | null | null |
3i9g | H | L | 0 | L | Hapten | S1P | (2S,3R,4E)-2-AMINO-3-HYDROXYOCTADEC-4-EN-1-YL DIHYDROGEN PHOSPHATE | IMMUNE SYSTEM | 07/10/09 | Crystal structure of the LT1009 (SONEPCIZUMAB) antibody Fab fragment in complex with sphingosine-1-phosphate | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Huxford, T. | 1.9 | X-RAY DIFFRACTION | 0.219 | 0.190 | false | true | IGHV5 | IGKV1 | Kappa | 0 | -12.21 | SPR | 25 | 19815502 |
3mlv | N | M | 0 | Q | peptide | null | hiv-1 gp120 third variable region (v3) crown | IMMUNE SYSTEM | 04/18/10 | Crystal structure of anti-HIV-1 V3 Fab 2557 in complex with an NOF V3 peptide | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kong, X.-P. | 2.48 | X-RAY DIFFRACTION | 0.342 | 0.233 | false | false | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
2a77 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/04/05 | Anti-Cocaine Antibody 7.5.21, Crystal Form II | MUS MUSCULUS | mus musculus | mus musculus | null | Pozharski, E., Hewagama, A., Shanafelt, A., Ringe, D., Petsko, G.A. | 1.8 | X-RAY DIFFRACTION | 0.263 | 0.218 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7dpm | J | K | 0 | L | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 12/20/20 | Crystal structure of SARS-CoV-2 Spike RBD in complex with MW06 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, J., Jiao, S., Wang, R., Zhang, J., Zhang, M., Wang, M. | 3.304 | X-RAY DIFFRACTION | 0.263 | 0.217 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1cf8 | H | L | 0 | H | Hapten | HAZ | 4-{4-[2-(1A,7A-DIMETHYL-4-OXY-OCTAHYDRO-1-OXA-4-AZA-CYCLOPROPA[A]NAPHTHALEN-4-YL) -ACETYLAMINO]-PHENYLCARBAMOYL}-BUTYRIC ACID | CATALYTIC ANTIBODY | 03/24/99 | Convergence of catalytic antibody and terpene cyclase mechanisms: polyene cyclization directed by carbocation-pi interactions | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Paschall, C.M., Hasserodt, J., Jones, T., Lerner, R.A., Janda, K.D., Christianson, D.W. | 2.7 | X-RAY DIFFRACTION | 0.257 | 0.165 | false | false | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
5h32 | G | H | 0 | A | protein | null | structural protein e | VIRUS/IMMUNE SYSTEM | 10/20/16 | Cryo-EM structure of zika virus complexed with Fab C10 at pH 5.0 | HOMO SAPIENS; ZIKA VIRUS | homo sapiens | homo sapiens | zika virus | Zhang, S., Kostyuchenko, V., Ng, T.-S., Lok, S.-M. | 12 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
7rkm | D | d | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 07/22/21 | Structure of CX3CL1-US28-Gi-scFv16 in C-state | HOMO SAPIENS; MUS MUSCULUS; HUMAN BETAHERPESVIRUS 5 | mus musculus | null | homo sapiens | homo sapiens | Tsutsumi, N., Qu, Q., Jude, K.M., Skiniotis, G., Garcia, K.C. | 3.5 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6qd6 | E | null | 0 | null | null | null | null | STRUCTURAL PROTEIN | 12/31/18 | Molecular scaffolds expand the nanobody toolkit for cryo-EM applications: crystal structure of Mb-cHopQ-Nb207 | HELICOBACTER PYLORI; HELICOBACTER PYLORI (STRAIN G27) | helicobacter pylori, helicobacter pylori(strain g27) | null | null | Uchanski, T., Masiulis, S., Fischer, B., Kalichuk, V., Wohlkonig, A., Zogg, T., Remaut, H., Vranken, W., Aricescu, A.R., Pardon, E., Steyaert, J. | 2.84 | X-RAY DIFFRACTION | 0.239 | 0.204 | false | true | IGHV1 | null | null | null | null | null | null | null |
6p3b | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/23/19 | Crystal structure of the anti-HIV antibody DH501 unmutated common ancestor (UCA) | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Nicely, N.I., Saunders, K.O. | 2.02 | X-RAY DIFFRACTION | 0.272 | 0.218 | false | true | IGHV2 | IGLV1 | Lambda | null | null | null | null | null |
6ey6 | I | null | 0 | A | protein | null | t9ss component cytoplasmic membrane protein porm | PROTEIN TRANSPORT | 11/10/17 | C-terminal part (residues 315-516) of PorM with the llama naobody nb130 | PORPHYROMONAS GINGIVALIS; LAMA GLAMA | lama glama | null | porphyromonas gingivalis | Leone, P., Cambillau, C., Roussel, A. | 2.1 | X-RAY DIFFRACTION | 0.215 | 0.181 | false | true | IGHV1 | null | null | null | null | null | null | null |
6mjz | H | L | 0 | C | A | B | protein | protein | protein | NA | NA | NA | fusion glycoprotein f0 | fusion glycoprotein f0 | fusion glycoprotein f0 | VIRAL PROTEIN/immune system | 09/24/18 | Cryo-EM structure of Human Parainfluenza Virus Type 3 (hPIV3) in complex with antibody PIA174 | HUMAN PARAINFLUENZA VIRUS 3; HOMO SAPIENS | homo sapiens | homo sapiens | human parainfluenza virus 3 | human parainfluenza virus 3 | human parainfluenza virus 3 | Acharya, P., Stewart-Jones, G., Carragher, B., Potter, C.S., Kwong, P.D. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
1bql | H | L | 0 | Y | protein | null | bobwhite quail lysozyme | ANTIBODY/ANTIGEN | 02/03/95 | STRUCTURE OF AN ANTI-HEL FAB FRAGMENT COMPLEXED WITH BOBWHITE QUAIL LYSOZYME | MUS MUSCULUS; COLINUS VIRGINIANUS | mus musculus | mus musculus | colinus virginianus | Chacko, S., Davies, D.R. | 2.6 | X-RAY DIFFRACTION | 0.291 | 0.191 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
5cd5 | C | D | 0 | A | protein | null | 93th057 hiv-1 gp120 core | IMMUNE SYSTEM | 07/03/15 | Crystal structure of an immature VRC01-class antibody DRVIA7 from a Chinese donor bound to clade A/E HIV-1 gp120 core | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kong, L., Wilson, I.A. | 3.396 | X-RAY DIFFRACTION | 0.306 | 0.253 | false | true | unknown | IGKV1 | Kappa | 0 | -8.920931 | SPR | null | TBD |
6x04 | F | null | 0 | E | protein | null | nucleoporin nup133 | STRUCTURAL PROTEIN | 05/15/20 | Nup133 (aa55-481) from S. cerevisiae bound by VHH-SAN5 | SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C); VICUGNA PACOS | vicugna pacos | null | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Nordeen, S.A., Schwartz, T.U. | 2.68 | X-RAY DIFFRACTION | 0.261 | 0.244 | false | true | IGHV1 | null | null | null | null | null | null | null |
1t4k | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 04/29/04 | Crystal Structure of Unliganded Aldolase Antibody 93F3 Fab | MUS MUSCULUS | mus musculus | mus musculus | null | Zhu, X., Wilson, I.A. | 2.5 | X-RAY DIFFRACTION | 0.281 | 0.233 | false | false | IGHV2 | IGKV8 | Kappa | null | null | null | null | null |
5tlj | B | A | 0 | X | protein | null | cd27 antigen | IMMUNE SYSTEM | 10/11/16 | COMPLEX BETWEEN HUMAN CD27 AND FAB FRAGMENTS OF ANTIBODIES M2177 AND M2191 | HOMO SAPIENS; MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L. | 3.5 | X-RAY DIFFRACTION | 0.356 | 0.283 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7pi3 | M | N | 0 | H | protein | null | cysteine-rich protective antigen | IMMUNE SYSTEM | 08/19/21 | PfCyRPA bound to Fab fragments from monoclonal antibodies Cy.003, Cy.004 and Cy.007 | PLASMODIUM FALCIPARUM 3D7; GALLUS GALLUS | gallus gallus | gallus gallus | plasmodium falciparum 3d7 | Ragotte, R.J., Higgins, M.K. | 3.269 | X-RAY DIFFRACTION | 0.298 | 0.285 | false | true | unknown | unknown | unknown | null | null | null | null | null |
4xwo | O | P | 0 | M | protein | null | sec22 | HYDROLASE/TRANSPORT PROTEIN | 01/29/15 | Structure of Get3 bound to the transmembrane domain of Sec22 | HOMO SAPIENS, SYNTHETIC CONSTRUCT; SACCHAROMYCES CEREVISIAE (ATCC 204508 / S288C); SACCHAROMYCES CEREVISIAE | homo sapiens, synthetic construct | homo sapiens, synthetic construct | saccharomyces cerevisiae (atcc 204508 / s288c) | Mateja, A., Paduch, M., Chang, H.-Y., Szydlowska, A., Kossiakoff, A.A., Hegde, R.S., Keenan, R.J. | 2.75 | X-RAY DIFFRACTION | 0.247 | 0.196 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5f97 | E | null | 0 | A | protein | null | adhesin binding fucosylated histo-blood group antigen,adhesin,adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/09/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain A730 in complex with blood group A type 1 hexasaccharide | HELICOBACTER PYLORI; LAMA GLAMA | lama glama | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.62 | X-RAY DIFFRACTION | 0.237 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null |
6wfz | H | L | 0 | P | peptide | null | npna3 peptide | IMMUNE SYSTEM | 04/04/20 | Crystal structure of Fab399 in complex with NPNA3 peptide from circumsporozoite protein | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Pholcharee, T., Oyen, D., Wilson, I.A. | 1.84 | X-RAY DIFFRACTION | 0.225 | 0.186 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
4xh2 | J | K | 0 | j | peptide | null | unknown | CELL ADHESION | 01/04/15 | Crystal structure of human paxillin LD4 motif in complex with Fab fragment | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A. | 2.0 | X-RAY DIFFRACTION | 0.258 | 0.224 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -11.216609 | Unknown | null | TBD |
43c9 | F | E | 0 | null | null | null | null | IMMUNOGLOBULIN | 03/10/99 | CRYSTALLOGRAPHIC STRUCTURE OF THE ESTEROLYTIC AND AMIDOLYTIC 43C9 ANTIBODY | MUS MUSCULUS | mus musculus | mus musculus | null | Thayer, M.M., Getzoff, E.D., Roberts, V.A. | 2.2 | X-RAY DIFFRACTION | 0.265 | 0.210 | false | true | IGHV2 | IGKV8 | Kappa | null | null | null | null | null |
5udd | N | T | 0 | G | protein | null | fusion glycoprotein f0 | Viral Protein/Immune System | 12/26/16 | Crystal Structure of RSV F B9320 Bound to MEDI8897 | HUMAN RESPIRATORY SYNCYTIAL VIRUS 9320; HOMO SAPIENS | homo sapiens | homo sapiens | human respiratory syncytial virus 9320 | McLellan, J.S. | 4.3 | X-RAY DIFFRACTION | 0.295 | 0.237 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3cm9 | D | O | 9 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6umg | h | l | 0 | c | r | protein | protein | NA | NA | unknown | unknown | MEMBRANE PROTEIN/IMMUNE SYSTEM | 10/09/19 | Crystal structure of erenumab Fab bound to the extracellular domain of CGRP receptor | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Mohr, C. | 2.7 | X-RAY DIFFRACTION | 0.282 | 0.245 | false | false | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6xc3 | H | L | 0 | C | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 06/08/20 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CC12.1 and CR3022 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Liu, H., Wu, N.C., Zhu, X., Wilson, I.A. | 2.698 | X-RAY DIFFRACTION | 0.225 | 0.177 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
7mf9 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/08/21 | Crystal structure of antibody 10E8v4-P100fA Fab in space group C2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kwon, Y.D., Kwong, P.D. | 3.7 | X-RAY DIFFRACTION | 0.269 | 0.240 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
6e5p | M | K | 0 | M | carbohydrate | NAG | polysaccharide | VIRAL PROTEIN | 07/21/18 | Backbone model based on cryo-EM map at 8.5 A of domain-swapped, glycan-reactive, neutralizing antibody 2G12 bound to HIV-1 Env BG505 DS-SOSIP, which was also bound to CD4-binding site antibody VRC03 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | homo sapiens | Acharya, P., Kwong, P.D. | 8.8 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
5jny | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 05/01/16 | Crystal Structure of 10E8 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Ofek, G., Kwong, P. | 3.041 | X-RAY DIFFRACTION | 0.215 | 0.188 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
4dke | H | L | 0 | A | protein | null | interleukin-34 | CYTOKINE/IMMUNE SYSTEM | 02/03/12 | Crystal Structure of Human Interleukin-34 Bound to FAb1.1 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ma, X., Chen, Y., Stawicki, S., Wu, Y., Bazan, J.F., Starovasnik, M.A. | 3.0 | X-RAY DIFFRACTION | 0.265 | 0.231 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -13.534418 | SPR | null | TBD |
7ul3 | C | null | 0 | A | protein | null | histamine h2 receptor | MEMBRANE PROTEIN | 04/03/22 | CryoEM Structure of Inactive H2R Bound to Famotidine, Nb6M, and NabFab | Homo sapiens; synthetic construct | synthetic construct | null | homo sapiens | Robertson, M.J., Skiniotis, G. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3auv | B | b | 0 | null | null | null | null | IMMUNE SYSTEM | 02/16/11 | Predicting Amino Acid Preferences in the Complementarity Determining Regions of an Antibody-Antigen Recognition Interface | HOMO SAPIENS | homo sapiens | null | null | Yu, C.M., Peng, H.P., Chen, I.C., Lee, Y.C., Chen, J.B., Tsai, K.C., Chen, C.T., Chang, J.Y., Yang, E.W., Hsu, P.C., Jian, J.W., Hsu, H.J., Chang, H.J., Hsu, W.L., Huang, K.F., Ma, A.C., Yang, A.S. | 2.4 | X-RAY DIFFRACTION | 0.251 | 0.216 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4k2u | I | M | 0 | B | protein | null | erythrocyte binding antigen 175 | IMMUNE SYSTEM | 04/09/13 | Crystal structure of PfEBA-175 F1 in complex with R218 antibody Fab fragment | PLASMODIUM FALCIPARUM; MUS MUSCULUS | mus musculus | mus musculus | plasmodium falciparum | Tolia, N.H. | 2.45 | X-RAY DIFFRACTION | 0.253 | 0.204 | false | false | IGHV14 | IGKV10 | Kappa | 0 | -14.754721 | SPR | null | TBD |
7cvz | Q | R | 0 | H | G | protein | protein | NA | NA | e2 glycoprotein | e1 glycoprotein | VIRUS/IMMUNE SYSTEM | 08/27/20 | Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-263 | CHIKUNGUNYA VIRUS; MUS MUSCULUS | mus musculus | mus musculus | chikungunya virus | chikungunya virus | Zhou, Q.F., Fox, J.M., Earnest, J.T., Ng, T.S., Kim, A.S., Fibriansah, G., Kostyuchenko, V.A., Shu, B., Diamond, M.S., Lok, S.M. | 4.7 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
6o24 | A | B | 0 | I | peptide | null | circumsporozoite protein | IMMUNE SYSTEM | 02/22/19 | Crystal structure of 4498 Fab in complex with circumsporozoite protein NANP3 and anti-Kappa VHH domain | HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Scally, S.W., Bosch, A., Prieto, K., Murugan, R., Wardemann, H., Julien, J.P. | 1.4 | X-RAY DIFFRACTION | 0.186 | 0.161 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
2qad | H | G | 0 | E | protein | null | envelope glycoprotein gp160 | viral protein/immune system | 06/14/07 | Structure of tyrosine-sulfated 412d antibody complexed with HIV-1 YU2 gp120 and CD4 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Huang, C.-C., Tang, M., Robinson, J., Wyatt, R., Kwong, P.D. | 3.3 | X-RAY DIFFRACTION | 0.269 | 0.202 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7np9 | C | null | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/21 | Structure of the human CR3 - CD11bCD18 specific nanobody hCR3Nb1 | LAMA GLAMA | lama glama | null | null | Jensen, R.K., Andersen, G.R. | 1.14 | X-RAY DIFFRACTION | 0.167 | 0.146 | false | true | IGHV1 | null | null | null | null | null | null | null |
7t0g | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/29/21 | Crystal structure of S25-39 Fab Unliganded 1 | MUS MUSCULUS | mus musculus | mus musculus | null | Legg, M.S.G., Blackler, R.J., Evans, S.V. | 1.53 | X-RAY DIFFRACTION | 0.212 | 0.176 | false | true | IGHV7 | IGKV8 | Kappa | null | null | null | null | null |
3l1o | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/14/09 | Crystal structure of monoclonal antibody MN423 Fab fragment with free combining site, crystallized in the presence of zinc | MUS MUSCULUS | mus musculus | mus musculus | null | Skrabana, R., Sevcik, J. | 2.0 | X-RAY DIFFRACTION | 0.249 | 0.158 | false | false | IGHV7 | IGKV16 | Kappa | null | null | null | null | null |
6idg | H | L | 0 | A | nucleic-acid | 64T | 5-HYDROXY-THYMIDINE-5'-MONOPHOSPHATE | IMMUNE SYSTEM | 09/10/18 | antibody 64M-5 Fab in complex with dT(6-4)T | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | synthetic construct | Yokoyama, H., Mizutani, R., Noguchi, S., Hayashida, N. | 2.0 | X-RAY DIFFRACTION | 0.240 | 0.192 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7kn6 | C | null | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/04/20 | Crystal structure of SARS-CoV-2 receptor binding domain complexed with nanobody VHH V and antibody Fab CC12.3 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS; HOMO SAPIENS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Liu, H., Yuan, M., Zhu, X., Wu, N.C., Wilson, I.A. | 2.55 | X-RAY DIFFRACTION | 0.239 | 0.193 | false | true | IGHV1 | null | null | null | null | null | null | null |
5mv4 | A | B | 0 | X | peptide | null | synthetic peptide containing the citrullinated collagentype ii epitope cii616-639,collagen alpha-1(ii) chain,synthetic peptide containing the citrullinated collagen type ii epitope cii616- 639 | IMMUNE SYSTEM | 01/15/17 | ACC1 Fab fragment in complex with citrullinated CII616-639 epitope of collagen type II (ptm23) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Holmdahl, R., Ge, C. | 2.9 | X-RAY DIFFRACTION | 0.247 | 0.232 | false | false | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
1kir | B | A | 0 | C | protein | null | lysozyme | COMPLEX (IMMUNOGLOBULIN/HYDROLASE) | 10/23/96 | FV MUTANT Y(A 50)S (VL DOMAIN) OF MOUSE MONOCLONAL ANTIBODY D1.3 COMPLEXED WITH HEN EGG WHITE LYSOZYME | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Fields, B.A., Poljak, R.J., Mariuzza, R.A. | 2.0 | X-RAY DIFFRACTION | unknown | 0.167 | false | true | IGHV2 | IGKV12 | Kappa | null | null | null | null | null |
6dbg | C | null | 0 | B | protein | null | internalin b | IMMUNE SYSTEM | 05/03/18 | Crystal Structure of VHH R303 in complex with InlB-LRR-IR | LISTERIA MONOCYTOGENES; CAMELUS DROMEDARIUS | camelus dromedarius | null | listeria monocytogenes | Brooks, C.L., Toride King, M., Huh, I. | 1.51 | X-RAY DIFFRACTION | 0.180 | 0.160 | false | true | IGHV1 | null | null | null | null | null | null | null |
6d6u | K | L | 0 | D | protein | null | gamma-aminobutyric acid receptor subunit alpha-1,gamma-aminobutyric acid receptor subunit alpha-1 | TRANSPORT PROTEIN | 04/22/18 | Human GABA-A receptor alpha1-beta2-gamma2 subtype in complex with GABA and flumazenil, conformation A | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Zhu, S., Noviello, C.M., Teng, J., Walsh Jr, R.M., Kim, J.J., Hibbs, R.E. | 3.8 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | 0 | -11.206815 | Unknown | null | TBD |
7ws7 | K | J | 0 | null | null | null | null | VIRAL PROTEIN/IMMUNE SYSTEM | 01/28/22 | Structures of Omicron Spike complexes illuminate broad-spectrum neutralizing antibody development | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | null | Guo, H., Gao, Y., Ji, X., Yang, H. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7ch4 | H | L | 0 | R | protein | null | spike glycoprotein | PROTEIN BINDING/IMMUNE SYSTEM | 07/05/20 | Crystal structure of the SARS-CoV-2 S RBD in complex with BD-604 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Du, S., Xiao, J.Y. | 3.15 | X-RAY DIFFRACTION | 0.273 | 0.225 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2kh2 | B | b | 46 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7rd4 | A | B | 0 | I | peptide | null | circumsporozoite protein | IMMUNE SYSTEM | 07/09/21 | Crystal structure of PfCSP peptide 21 with vaccine-elicited human anti-malaria antibody m43.149 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | plasmodium falciparum | Xu, K., Kwong, P.D. | 1.75 | X-RAY DIFFRACTION | 0.233 | 0.194 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
3qeh | G | H | 0 | null | null | null | null | IMMUNE SYSTEM | 01/20/11 | Crystal structure of human N12-i15, an ADCC and non-neutralizing anti-HIV-1 Env antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Guan, Y., DeVico, A.L., Lewis, G.K., Pazgier, M. | 2.59 | X-RAY DIFFRACTION | 0.254 | 0.216 | false | false | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
5uk4 | h | null | 0 | H | protein | null | anti-vesicular stomatitis virus n vhh | Viral Protein/RNA/Immune System | 01/19/17 | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | VESICULAR STOMATITIS INDIANA VIRUS (STRAIN SAN JUAN); VICUGNA PACOS | vicugna pacos | null | vesicular stomatitis indiana virus (strain sanjuan) | Hanke, L., Knockenhauer, K.E., Ploegh, H.L., Schwartz, T.U. | 3.204 | X-RAY DIFFRACTION | 0.288 | 0.237 | false | false | IGHV1 | null | null | null | null | null | null | null |
2zjs | H | L | 0 | Y | protein | null | preprotein translocase secy subunit | PROTEIN TRANSPORT/IMMUNE SYSTEM | 03/08/08 | Crystal Structure of SecYE translocon from Thermus thermophilus with a Fab fragment | THERMUS THERMOPHILUS; MUS MUSCULUS | mus musculus | mus musculus | thermus thermophilus | Tsukazaki, T., Mori, H., Fukai, S., Ishitani, R., Perederina, A., Vassylyev, D.G., Ito, K., Nureki, O. | 3.2 | X-RAY DIFFRACTION | 0.280 | 0.244 | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
7m51 | H | L | 0 | A | peptide | null | spike glycoprotein stem helix peptide | ANTIVIRAL PROTEIN, IMMUNE SYSTEM | 03/22/21 | B6 Fab fragment bound to the OC43 spike stem helix peptide | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human coronavirus oc43 | Sauer, M.M., Park, Y.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 1.8 | X-RAY DIFFRACTION | 0.230 | 0.182 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
3auv | E | e | 0 | null | null | null | null | IMMUNE SYSTEM | 02/16/11 | Predicting Amino Acid Preferences in the Complementarity Determining Regions of an Antibody-Antigen Recognition Interface | HOMO SAPIENS | homo sapiens | null | null | Yu, C.M., Peng, H.P., Chen, I.C., Lee, Y.C., Chen, J.B., Tsai, K.C., Chen, C.T., Chang, J.Y., Yang, E.W., Hsu, P.C., Jian, J.W., Hsu, H.J., Chang, H.J., Hsu, W.L., Huang, K.F., Ma, A.C., Yang, A.S. | 2.4 | X-RAY DIFFRACTION | 0.251 | 0.216 | true | true | unknown | unknown | unknown | null | null | null | null | null |
1i3g | H | L | 0 | null | null | null | null | ANTIBIOTIC | 02/15/01 | CRYSTAL STRUCTURE OF AN AMPICILLIN SINGLE CHAIN FV, FORM 1, FREE | MUS MUSCULUS | mus musculus | mus musculus | null | Jung, S., Spinelli, S., Schimmele, B., Honegger, A., Pugliese, L., Cambillau, C., Pluckthun, A. | 2.44 | X-RAY DIFFRACTION | 0.243 | 0.175 | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
6az2 | C | E | 0 | D | protein | null | histone chaperone asf1 | IMMUNE SYSTEM | 09/09/17 | Crystal structure of Asf1-Fab 12E complex | HOMO SAPIENS; SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C) | homo sapiens | homo sapiens | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Bailey, L.J., Kossiakoff, A.A. | 2.477 | X-RAY DIFFRACTION | 0.228 | 0.193 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7neh | H | L | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/04/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D. | 1.77 | X-RAY DIFFRACTION | 0.198 | 0.188 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6nmr | F | G | 0 | I | protein | null | tyrosine-protein phosphatase non-receptor type substrate 1 | IMMUNE SYSTEM | 01/11/19 | Blocking Fab 119 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wibowo, A.S., Carter, J.J., Sim, J. | 2.42 | X-RAY DIFFRACTION | 0.323 | 0.289 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
1nbv | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 03/16/93 | AN AUTOANTIBODY TO SINGLE-STRANDED DNA: COMPARISON OF THE THREE-DIMENSIONAL STRUCTURES OF THE UNLIGANDED FAB AND A DEOXYNUCLEOTIDE-FAB COMPLEX | MUS MUSCULUS | mus musculus | mus musculus | null | Herron, J.N., He, X.M., Edmundson, A.B. | 2.0 | X-RAY DIFFRACTION | unknown | 0.246 | false | true | IGHV10 | IGKV1 | Kappa | null | null | null | null | null |
2mkw | null | A | 13 | null | null | null | null | IMMUNE SYSTEM | 02/13/14 | Solution Structure of 6aJl2 and 6aJL2-R24G Amyloidogenics Light Chain Proteins | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
3ria | F | N | 0 | B | protein | null | avermectin-sensitive glutamate-gated chloride channel gluclalpha | TRANSPORT PROTEIN/IMMUNE SYSTEM | 04/13/11 | C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab, ivermectin and iodide. | CAENORHABDITIS ELEGANS; MUS MUSCULUS | mus musculus | mus musculus | caenorhabditis elegans | Hibbs, R.E., Gouaux, E. | 3.8 | X-RAY DIFFRACTION | 0.280 | 0.266 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5uek | H | L | 0 | A | protein | null | histone chaperone asf1 | IMMUNE SYSTEM | 01/02/17 | Structure of antigen-Fab 12E complex with Histone chaperone ASF1 | SACCHAROMYCES CEREVISIAE; HOMO SAPIENS | homo sapiens | homo sapiens | saccharomyces cerevisiae | Bailey, L.J., Kossiakoff, A.A. | 1.7 | X-RAY DIFFRACTION | 0.213 | 0.176 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7n9v | L | null | 0 | A | protein | null | capsid protein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/18/21 | CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions | Human immunodeficiency virus 1; Lama glama | lama glama | null | human immunodeficiency virus 1 | Tripler, T.N. | 3.45 | X-RAY DIFFRACTION | 0.258 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null |
3ixy | I | J | 0 | B | protein | null | envelope protein e | VIRUS | 02/26/09 | The pseudo-atomic structure of dengue immature virus in complex with Fab fragments of the anti-fusion loop antibody E53 | DENGUE VIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | dengue virus 2 | Cherrier, M.V., Kaufmann, B., Nybakken, G.E., Lok, S.M., Warren, J.T., Nelson, C.A., Kostyuchenko, V.A., Holdaway, H.A., Chipman, P.R., Kuhn, R.J., Diamond, M.S., Rossmann, M.G., Fremont, D.H. | 23 | ELECTRON MICROSCOPY | null | null | false | true | IGHV7 | IGKV4 | Kappa | null | null | null | null | null |
7mep | H | L | 0 | A | protein | null | bg505 sosipv5.2(7s) - gp120 | VIRAL PROTEIN | 04/07/21 | BG505 SOSIP.v5.2(7S) in complex with the monoclonal antibodies Rh.33172 mAb.1 and RM19R | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS | macaca mulatta | macaca mulatta | human immunodeficiency virus | Antanasijevic, A., Ward, A.B. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5w1k | T | S | 0 | R | protein | null | pre-glycoprotein polyprotein gp complex | VIRAL PROTEIN/IMMUNE SYSTEM | 06/03/17 | JUNV GP1 CR1-10 Fab CR1-28 Fab complex | HOMO SAPIENS; JUNIN MAMMARENAVIRUS | homo sapiens | homo sapiens | junin mammarenavirus | Raymond, D.D., Clark, L.E., Abraham, J. | 3.99 | X-RAY DIFFRACTION | 0.288 | 0.237 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6nc3 | Q | V | 0 | K | E | protein | protein | NA | NA | hiv-1 env amc011 v4.2 sosip gp41 | hiv-1 env amc011 v4.2 sosip gp120 | IMMUNE SYSTEM | 12/10/18 | AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody VRC34 fragment antigen binding | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Cottrell, C.A., Ozorowski, G., Torres, J.L., Ward, A.B. | 4.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6wn4 | A | B | 0 | C | peptide | null | lipoprotein lipase peptide | IMMUNE SYSTEM | 04/22/20 | Structural basis for the binding of monoclonal antibody 5D2 to the tryptophan-rich lipid-binding loop in lipoprotein lipase | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Luz, J.G., Birrane, G., Young, S.G., Meiyappan, M., Ploug, M. | 2.8 | X-RAY DIFFRACTION | 0.243 | 0.208 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
5any | K | O | 0 | F | E | protein | protein | NA | NA | e2 | e1 | VIRUS | 09/08/15 | Electron cryo-microscopy of chikungunya virus in complex with neutralizing antibody Fab CHK265 | CHIKUNGUNYA VIRUS; MUS MUSCULUS | mus musculus | mus musculus | chikungunya virus | chikungunya virus | Fox, J.M., Long, F., Edeling, M.A., Lin, H., Duijl-Richter, M., Fong, R.H., Kahle, K.M., Smit, J.M., Jin, J., Simmons, G., Doranz, B.J., Crowe, J.E., Fremont, D.H., Rossmann, M.G., Diamond, M.S. | 16.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
6qb6 | H | L | 0 | A | protein | null | induced myeloid leukemia cell differentiation protein mcl-1 | APOPTOSIS | 12/20/18 | Mcl1 in complex with a Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Hargreaves, D. | 2.24 | X-RAY DIFFRACTION | 0.232 | 0.187 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
1bzq | N | null | 0 | B | protein | null | protein (rnase a) | HYDROLASE/IMMUNE SYSTEM | 11/03/98 | COMPLEX OF A DROMEDARY SINGLE-DOMAIN VHH ANTIBODY FRAGMENT WITH RNASE A | CAMELUS DROMEDARIUS; BOS TAURUS | camelus dromedarius | null | bos taurus | Decanniere, K., Desmyter, A., Gahroudhi, M., Lauwereys, M., Muyldermans, S., Wyns, L. | 2.8 | X-RAY DIFFRACTION | 0.282 | 0.222 | false | true | IGHV1 | null | null | null | null | null | null | null |
3zkm | H | L | 0 | A | protein | null | beta-secretase 2 | HYDROLASE/IMMUNE SYSTEM | 01/23/13 | BACE2 FAB COMPLEX | HOMO SAPIENS; MUS MUSCULUS | homo sapiens | mus musculus | homo sapiens | Banner, D.W., Kuglstatter, A., Benz, J., Stihle, M., Ruf, A. | 1.85 | X-RAY DIFFRACTION | 0.24545 | 0.21077 | false | true | IGHV2 | IGKV3 | Kappa | null | null | null | null | null |
2mmx | null | A | 12 | null | null | null | null | IMMUNE SYSTEM | 03/20/14 | NMR study of 6aJL2 | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
6wk4 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 04/15/20 | Fab Fragment of Anti-human LAG3 antibody (13E2) | MUS MUSCULUS | mus musculus | mus musculus | null | Agnihotri, P., Mishra, A.K., Mariuzza, R.A. | 2.1 | X-RAY DIFFRACTION | 0.228 | 0.186 | false | true | IGHV8 | IGKV6 | Kappa | null | null | null | null | null |
6woz | K | L | 0 | J | protein | null | reticulocyte binding protein 2b | CELL INVASION | 04/26/20 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 251249 | PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium vivax (strain salvador i) | Chan, L.J., Dietrich, M.H., Tham, W.H. | 2.9 | X-RAY DIFFRACTION | 0.258 | 0.211 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7kfb | G | J | 0 | A | protein | null | virion spike glycoprotein 1 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/13/20 | Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-442 | EBOLA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | ebola virus | Murin, C.D., Ward, A.B. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5xcr | A | B | 0 | C | peptide | null | c8 peptide | IMMUNE SYSTEM | 03/23/17 | Crystal structure of P20.1 Fv-clasp fragment with its antigen peptide | MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Arimori, T., Takagi, J. | 1.75 | X-RAY DIFFRACTION | 0.202 | 0.171 | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
7c4s | J | K | 0 | B | protein | null | sphingosine 1-phosphate receptor 3 | MEMBRANE PROTEIN | 05/18/20 | Sphingosine-1-phosphate receptor 3 with a natural ligand. | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Iwata, S., Maeda, S., Luo, F., Nango, E., hirata, K., Asada, H. | 3.2 | X-RAY DIFFRACTION | 0.263 | 0.242 | false | false | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
7f2s | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 06/14/21 | Crystal structure of anti S-gatifloxacin antibody Fab fragment apo form | MUS MUSCULUS | mus musculus | mus musculus | null | Wang, L.T., Jiao, W.Y., Shen, X., Lei, H.T. | 2.62 | X-RAY DIFFRACTION | 0.278 | 0.247 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1xcq | F | E | 0 | P | N | peptide | protein | NA | NA | capsid protein c | protein l | IMMUNE SYSTEM | 09/03/04 | Complex HCV core-Fab 19D9D6-Protein L mutant (D55A,L57H,Y64W) in space group P21 | FINEGOLDIA MAGNA; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | | finegoldia magna | Menez, R., Housden, N.G., Harrison, S., Jolivet-Reynaud, C., Gore, M.G., Stura, E.A. | 3.5 | X-RAY DIFFRACTION | 0.264 | 0.192 | false | false | IGHV9 | IGKV8 | Kappa | null | null | null | null | null |
7kji | A | null | 0 | B | protein | null | surface protein p12p | UNKNOWN FUNCTION | 10/26/20 | Plasmodium falciparum protein Pf12p bound to nanobody D9 | VICUGNA PACOS; PLASMODIUM FALCIPARUM | vicugna pacos | null | plasmodium falciparum | Dietrich, M.H., Tham, W.H. | 3.25 | X-RAY DIFFRACTION | 0.286 | 0.245 | false | true | IGHV1 | null | null | null | null | null | null | null |
3hfm | H | L | 0 | Y | protein | null | hen egg white lysozyme | COMPLEX(ANTIBODY-ANTIGEN) | 08/11/88 | STRUCTURE OF AN ANTIBODY-ANTIGEN COMPLEX. CRYSTAL STRUCTURE OF THE HY/HEL-10 FAB-LYSOZYME COMPLEX | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Padlan, E.A., Davies, D.R. | 3.0 | X-RAY DIFFRACTION | unknown | unknown | false | true | IGHV3 | IGKV5 | Kappa | null | null | null | null | null |
4c59 | B | null | 0 | A | protein | null | cyclin-g-associated kinase | TRANSFERASE | 09/10/13 | Structure of GAK kinase in complex with nanobody (NbGAK_4) | HOMO SAPIENS; SYNTHETIC CONSTRUCT | lama glama | null | homo sapiens | Chaikuad, A., Keates, T., Allerston, C.K., Gileadi, O., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Muller-Knapp, S. | 2.8 | X-RAY DIFFRACTION | 0.26163 | 0.20238 | false | false | IGHV1 | null | null | null | null | null | null | null |
6wh9 | E | F | 0 | D | protein | null | kr1 | OXIDOREDUCTASE/IMMUNE SYSTEM | 04/07/20 | Ketoreductase from module 1 of the 6-deoxyerythronolide B synthase (KR1) in complex with antibody fragment (Fab) 1D10 | SACCHAROPOLYSPORA ERYTHRAEA; HOMO SAPIENS | homo sapiens | homo sapiens | saccharopolyspora erythraea | Cogan, D.P., Mathews, I.I., Khosla, C. | 2.75 | X-RAY DIFFRACTION | 0.271 | 0.228 | false | true | IGHV1 | IGLV7 | Lambda | null | null | null | null | null |
2ny7 | H | L | 0 | G | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/20/06 | HIV-1 gp120 Envelope Glycoprotein Complexed with the Broadly Neutralizing CD4-Binding-Site Antibody b12 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Xu, L., Dey, B., Hessell, A.J., Van Ryk, D., Xiang, S.H., Yang, X., Zhang, M.Y., Zwick, M.B., Arthos, J., Burton, D.R., Dimitrov, D.S., Sodroski, J., Wyatt, R., Nabel, G.J., Kwong, P.D. | 2.3 | X-RAY DIFFRACTION | 0.255 | 0.193 | false | true | IGHV1 | IGKV3 | Kappa | 0 | null | SPR | null | 17301785 |
6w7s | H | L | 0 | A | protein | null | eryai | OXIDOREDUCTASE/IMMUNE SYSTEM | 03/19/20 | Ketoreductase from module 1 of the 6-deoxyerythronolide B synthase (KR1) in complex with antibody fragment (Fab) 2G10 | SACCHAROPOLYSPORA ERYTHRAEA; HOMO SAPIENS | homo sapiens | homo sapiens | saccharopolyspora erythraea | Cogan, D.P., Mathews, I.I., Khosla, C. | 2.25 | X-RAY DIFFRACTION | 0.232 | 0.179 | false | true | IGHV3 | IGLV5 | Lambda | null | null | null | null | null |
5vl2 | D | null | 0 | D | Hapten | 9EG | N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea | UNKNOWN FUNCTION | 04/24/17 | The hapten triclocarban bound to the single domain camelid nanobody VHH T4 | LAMA GLAMA | lama glama | null | lama glama | Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.9 | X-RAY DIFFRACTION | 0.263 | 0.219 | false | true | IGHV1 | null | null | null | null | null | null | null |
4xgz | E | F | 0 | e | peptide | null | unknown | CELL ADHESION | 01/04/15 | Crystal structure of human paxillin LD2 motif in complex with Fab fragment | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A. | 2.5 | X-RAY DIFFRACTION | 0.245 | 0.228 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -10.395252 | Unknown | null | TBD |
2gfb | P | O | 0 | null | null | null | null | IMMUNOGLOBULIN | 07/07/94 | CRYSTAL STRUCTURE OF A CATALYTIC FAB HAVING ESTERASE-LIKE ACTIVITY | MUS MUSCULUS | mus musculus | mus musculus | null | Golinelli-Pimpaneau, B., Knossow, M. | 3.0 | X-RAY DIFFRACTION | unknown | 0.213 | false | false | IGHV5 | IGKV9 | Kappa | null | null | null | null | null |
3chn | C | O | 6 | null | null | null | null | IMMUNE SYSTEM | 03/10/08 | Solution structure of human secretory IgA1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING / HOMOLOGY MODEL | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
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