pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
5kem | D | E | 0 | A | protein | null | ebola secreted glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/09/16 | EBOV sGP in complex with variable Fab domains of IgGs c13C6 and BDBV91 | HOMO SAPIENS; ZAIRE EBOLAVIRUS | homo sapiens | homo sapiens | zaire ebolavirus | Pallesen, J., Murin, C.D., de Val, N., Cottrell, C.A., Hastie, K.M., Turner, H.L., Fusco, M.L., Flyak, A.I., Zeitlin, L., Crowe Jr., J.E., Andersen, K.G., Saphire, E.O., Ward, A.B. | 5.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV8 | IGKV6 | Kappa | null | null | null | null | null |
7uap | O | P | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 03/13/22 | Structure of the SARS-CoV-2 S 6P trimer in complex with the neutralizing antibody Fab fragment, C1520 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV4 | Lambda | null | null | null | null | null |
1nc4 | B | A | 0 | B | Hapten | DOF | (S)-2-(4-NITROBENZYL)-1,4,7,10-TETRAAZACYCLODODECANE-N,N',N'',N'''-TETRAACETATE | Immune system | 12/04/02 | Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Gd-DOTA | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Corneillie, T.M., Fisher, A.J., Meares, C.F. | 2.25 | X-RAY DIFFRACTION | 0.248 | 0.208 | false | false | IGHV2 | IGLV1 | Lambda | null | null | null | null | null |
6gku | H | L | 0 | A | protein | null | galectin-10 | SUGAR BINDING PROTEIN | 05/21/18 | Structure of galectin-10 in complex with the Fab fragment of a Charcot-Leyden crystal solubilizing antibody, 6F5 | HOMO SAPIENS; LAMA GLAMA | lama glama | lama glama | homo sapiens | Verstraete, K., Verschueren, K., Savvides, S.N. | 1.91 | X-RAY DIFFRACTION | 0.201 | 0.166 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6s3t | E | I | 0 | T | protein | null | 46 kda surface antigen | PROTEIN BINDING | 06/26/19 | P46, an immunodominant surface protein from Mycoplasma hyopneumoniae | MYCOPLASMA HYOPNEUMONIAE J; MUS MUSCULUS | mus musculus | mus musculus | mycoplasma hyopneumoniae j | Guasch, A., Fita, I. | 3.5 | X-RAY DIFFRACTION | unknown | unknown | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
2ltq | F | E | 5 | D | protein | null | disulfide bond formation protein b | MEMBRANE PROTEIN, OXIDOREDUCTASE | 05/30/12 | High resolution structure of DsbB C41S by joint calculation with solid-state NMR and X-ray data | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Tang, M., Sperling, L.J., Schwieters, C.D., Nesbitt, A.E., Gennis, R.B., Rienstra, C.M. | NOT | SOLID-STATE NMR | null | null | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
3lrh | null | K | 0 | L | peptide | null | huntingtin | IMMUNE SYSTEM | 02/11/10 | Structure of anti-huntingtin VL domain in complex with huntingtin peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | null | homo sapiens | null | Schiefner, A., Chatwell, L., Skerra, A. | 2.6 | X-RAY DIFFRACTION | 0.278 | 0.216 | false | true | null | IGLV1 | Lambda | 0 | -10.022811 | Unknown | null | TBD |
6dfg | I | K | 0 | D | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/14/18 | BG505 MD39 SOSIP trimer in complex with mature BG18 fragment antigen binding | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Ozorowski, G., Steichen, J.M., Schief, W.R., Ward, A.B. | 4.42 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGLV3 | Lambda | null | null | null | null | null |
4mwf | H | L | 0 | C | protein | null | envelope glycoprotein e2 | IMMUNE SYSTEM | 09/24/13 | Structure of Hepatitis C Virus Envelope Glycoprotein E2 core bound to broadly neutralizing antibody AR3C | HOMO SAPIENS; HEPATITIS C VIRUS (ISOLATE H) | homo sapiens | homo sapiens | hepatitis c virus (isolate h) | Kong, L., Wilson, I.A., Law, M. | 2.645 | X-RAY DIFFRACTION | 0.270 | 0.231 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6ch7 | Q | R | 0 | G | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 02/22/18 | XFEL crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 3.8 | X-RAY DIFFRACTION | 0.262 | 0.232 | false | true | unknown | IGLV3 | Lambda | null | null | null | null | null |
7rk1 | D | d | 0 | B | protein | null | capsid polyprotein vp70 | VIRAL PROTEIN | 07/21/21 | Crystal structure of the human astrovirus serotype 8 capsid spike in complex with scFv 3E8, an astrovirus-neutralizing antibody, at 2.05-A resolution | HUMAN ASTROVIRUS-8; MUS MUSCULUS | mus musculus | null | human astrovirus-8 | Meyer, L., DuBois, R.M. | 2.05 | X-RAY DIFFRACTION | 0.238 | 0.223 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6vep | C | D | 0 | E | protein | null | insulin receptor subunit alpha | HORMONE RECEPTOR/HORMONE/IMMUNE SYSTEM | 06/03/20 | Human insulin in complex with the human insulin microreceptor in turn in complex with Fv 83-7 | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Lawrence, M.C., Menting, J.G.T. | 2.9 | X-RAY DIFFRACTION | 0.225 | 0.193 | false | true | IGHV2 | IGKV8 | Kappa | null | null | null | null | null |
7lg6 | O | Q | 0 | E | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/19/21 | BG505 SOSIP.v5.2 in complex with VRC40.01 and RM19R Fabs | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; MACACA MULATTA | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Cottrell, C.A., Torres, J.L., Wu, N.R., Ward, A.B. | 3.28 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
6nf2 | W | X | 0 | R | protein | null | envelope glycoprotein gp41 | IMMUNE SYSTEM | 12/18/18 | Cryo-EM structure of vaccine-elicited antibody 0PV-c.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
3hi1 | B | A | 0 | J | protein | null | glycoprotein 120 | STRUCTURAL PROTEIN/Immune System | 05/18/09 | Structure of HIV-1 gp120 (core with V3) in Complex with CD4-Binding-Site Antibody F105 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus type 1 | Kwon, Y.D., Chen, L., Zhou, T., Wu, X., O'Dell, S., Cavacini, L., Hessell, A.J., Pancera, M., Tang, M., Xu, L., Yang, Z., Zhang, M.-Y., Arthos, J., Burton, D.R., Dimitrov, D., Nabel, G.J., Posner, M., Sodroski, J., Wyatt, R., Mascola, J.R., Kwong, P.D. | 2.9 | X-RAY DIFFRACTION | 0.243 | 0.202 | false | false | IGHV4 | IGKV3 | Kappa | 0 | -10.84 | SPR | null | 19965434 |
2bx5 | null | J | 0 | null | null | null | null | ANTIBODY | 07/22/05 | Is FR1 the antibody's Achillies heel | ESCHERICHIA COLI | null | null | null | James, L.C. | 2.7 | X-RAY DIFFRACTION | 0.290 | 0.250 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
1shm | E | null | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/04 | Convergent solutions to VHH domain stabilization from natural and in vitro evolution | LAMA GLAMA | lama glama | null | null | Bond, C.J., Wiesmann, C., Marsters, J.C., Sidhu, S.S. | 1.9 | X-RAY DIFFRACTION | 0.236 | 0.185 | false | true | IGHV1 | null | null | null | null | null | null | null |
4okv | C | D | 0 | E | protein | null | anti-platelet aggregation protein | BLOOD CLOTTING | 01/23/14 | Crystal structure of anopheline anti-platelet protein with Fab antibody | ANOPHELES STEPHENSI; MUS MUSCULUS | mus musculus | mus musculus | anopheles stephensi | Park, S.Y., Sugiyama, K. | 1.802 | X-RAY DIFFRACTION | 0.250 | 0.218 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7czq | H | K | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 09/09/20 | S protein of SARS-CoV-2 in complex bound with P2B-1A10 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4nkd | G | H | 0 | null | null | null | null | IMMUNE SYSTEM/CHAPERONE | 11/12/13 | Crystal structure of engineered anti-EE scFv antibody fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Kalyoncu, S., Hyun, J., Pai, J.C., Johnson, J.L., Etzminger, K., Jain, A., Heaner Jr., D., Molares, I.A., Truskett, T.M., Maynard, J.A., Lieberman, R.L. | 3.303 | X-RAY DIFFRACTION | 0.231 | 0.195 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2fd6 | H | L | 0 | U | protein | null | urokinase plasminogen activator surface receptor | IMMUNE SYSTEM, HYDROLASE | 12/13/05 | Structure of Human Urokinase Plasminogen Activator in Complex with Urokinase Receptor and an anti-upar antibody at 1.9 A | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Huang, M., Huai, Q., Li, Y. | 1.9 | X-RAY DIFFRACTION | 0.276 | 0.239 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6qu9 | H | L | 0 | null | null | null | null | PROTEIN BINDING | 02/26/19 | Fab fragment of an antibody that inhibits polymerisation of alpha-1-antitrypsin | MUS MUSCULUS | mus musculus | mus musculus | null | Jagger, A.M., Heyer-Chauhan, N., Lomas, D.A., Irving, J.A. | 1.9 | X-RAY DIFFRACTION | 0.233 | 0.202 | false | false | IGHV1 | IGKV19 | Kappa | null | null | null | null | null |
5ggs | A | B | 0 | Z | protein | null | programmed cell death protein 1 | IMMUNE SYSTEM | 06/16/16 | PD-1 in complex with pembrolizumab Fab | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Heo, Y.S. | 1.997 | X-RAY DIFFRACTION | 0.228 | 0.180 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4buh | B | b | 0 | null | null | null | null | null | 06/20/13 | Human IgE against the major allergen Bet v 1 - Crystal structure of clone M0418 scFv | HOMO SAPIENS | homo sapiens | null | null | Davies, A.M., Levin, M., Lilljekvist, M., Carlsson, F., Gould, H.J., Sutton, B.J., Ohlin, M. | 1.3 | X-RAY DIFFRACTION | 0.1728 | 0.1453 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6i9i | A | B | 0 | C | protein | null | glycoprotein | VIRAL PROTEIN | 11/23/18 | Rift valley fever virus Gn in complex with a neutralizing antibody fragment | ORYCTOLAGUS CUNICULUS; RIFT VALLEY FEVER VIRUS | oryctolagus cuniculus | oryctolagus cuniculus | rift valley fever virus | Allen, E.R., Bowden, T.A. | 1.98 | X-RAY DIFFRACTION | 0.243 | 0.203 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5jof | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 05/02/16 | Crystal structure of VRC03 gHVgLV antigen-binding fragment. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Joyce, M.G., Mascola, J.R., Kwong, P.D. | 3.208 | X-RAY DIFFRACTION | 0.242 | 0.195 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5o6v | I | M | 0 | C | protein | null | genome polyprotein | VIRUS | 06/07/17 | The cryo-EM structure of Tick-borne encephalitis virus complexed with Fab fragment of neutralizing antibody 19/1786 | TICK-BORNE ENCEPHALITIS VIRUS (STRAIN HYPR); MUS MUSCULUS | mus musculus | mus musculus | tick-borne encephalitis virus (strain hypr) | Fuzik, T., Plevka, P. | 3.9, 3.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV6 | Kappa | null | null | null | null | null |
5wob | Q | R | 0 | E | protein | null | insulin | HYDROLASE | 08/01/17 | Crystal Structure Analysis of Fab1-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin | HOMO SAPIENS; MUS MUSCULOIDES | mus musculoides | mus musculoides | homo sapiens | McCord, L.A., Liang, W.G., Farcasanu, M., Wang, A.G., Koide, S., Tang, W.J. | 3.95 | X-RAY DIFFRACTION | 0.291 | 0.243 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2gfb | D | C | 0 | null | null | null | null | IMMUNOGLOBULIN | 07/07/94 | CRYSTAL STRUCTURE OF A CATALYTIC FAB HAVING ESTERASE-LIKE ACTIVITY | MUS MUSCULUS | mus musculus | mus musculus | null | Golinelli-Pimpaneau, B., Knossow, M. | 3.0 | X-RAY DIFFRACTION | unknown | 0.213 | false | false | IGHV5 | IGKV9 | Kappa | null | null | null | null | null |
1vhp | A | null | 10 | null | null | null | null | IMMUNOGLOBULIN | 04/16/96 | VH-P8, NMR | HOMO SAPIENS | homo sapiens | null | null | Riechmann, L. | NOT | SOLUTION NMR | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
2kqm | null | B | 7 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6lxi | H | L | 0 | A | protein | null | neuraminidase | HYDROLASE/IMMUNE SYSTEM | 02/11/20 | Crystal structure of Z2B3 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1) | INFLUENZA A VIRUS (STRAIN A/BREVIG MISSION/1/1918 H1N1); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (strain a/brevigmission/1/1918 h1n1) | Jiang, H., Peng, W., Qi, J., Chai, Y., Song, H., Shi, Y., Gao, G.F., Wu, Y. | 2.5 | X-RAY DIFFRACTION | 0.212 | 0.183 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
7tqa | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 01/26/22 | Crystal Structure of monoclonal S9.6 Fab | SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | null | Bou Nader, C., Zhang, J. | 2.328 | X-RAY DIFFRACTION | 0.235 | 0.179 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6gk7 | H | L | 0 | A | peptide | null | human tau peptide a8119 residues 299-318 | IMMUNE SYSTEM | 05/18/18 | Crystal structure of anti-tau antibody dmCBTAU-27.1, double mutant (S31Y, T100I) of CBTAU-27.1, in complex with Tau peptide A8119B (residues 299-318) | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Steinbacher, S., Mrosek, M., Juraszek, J. | 2.95 | X-RAY DIFFRACTION | 0.268 | 0.220 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
6obd | B | A | 0 | E | peptide | null | gld52 peptide mimetic | IMMUNE SYSTEM | 03/20/19 | Crystal structure of anti-GLD52 Fab complex with human GLD52 peptide mimetic | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Wei, R. | 2.2 | X-RAY DIFFRACTION | 0.307 | 0.234 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6qd6 | H | null | 0 | null | null | null | null | STRUCTURAL PROTEIN | 12/31/18 | Molecular scaffolds expand the nanobody toolkit for cryo-EM applications: crystal structure of Mb-cHopQ-Nb207 | HELICOBACTER PYLORI; HELICOBACTER PYLORI (STRAIN G27) | helicobacter pylori, helicobacter pylori(strain g27) | null | null | Uchanski, T., Masiulis, S., Fischer, B., Kalichuk, V., Wohlkonig, A., Zogg, T., Remaut, H., Vranken, W., Aricescu, A.R., Pardon, E., Steyaert, J. | 2.84 | X-RAY DIFFRACTION | 0.239 | 0.204 | false | true | IGHV1 | null | null | null | null | null | null | null |
1h0d | B | A | 0 | C | protein | null | angiogenin | IMMUNE SYSTEM/HYDROLASE | 06/19/02 | Crystal structure of Human Angiogenin in complex with Fab fragment of its monoclonal antibody mAb 26-2F | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Chavali, G.B., Papageorgiou, A.C., Acharya, K.R. | 2.0 | X-RAY DIFFRACTION | 0.272 | 0.232 | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
3se9 | H | L | 0 | G | protein | null | hiv-1 clade ae strain 93th057 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/10/11 | Crystal structure of broadly and potently neutralizing antibody VRC-PG04 in complex with HIV-1 gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kwong, P.D., Zhou, T. | 2.0 | X-RAY DIFFRACTION | 0.233 | 0.190 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6msy | H | L | 0 | H | carbohydrate | MAN | polysaccharide | IMMUNE SYSTEM | 10/18/18 | Anti-HIV-1 Fab Fab 2G12 + Man4 re-refinement | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Calarese, D.A., Stanfield, R.L., Wilson, I.A. | 1.999 | X-RAY DIFFRACTION | 0.242 | 0.206 | false | true | unknown | IGKV1 | Kappa | 0 | -9.549709 | Unknown | null | TBD |
6ot1 | A | C | 0 | O | protein | null | envelope glycoprotein gp41 | IMMUNE SYSTEM | 05/02/19 | Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; HOMO SAPIENS | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
7lf1 | O | Q | 0 | N | protein | null | arginase-1 | HYDROLASE/IMMUNE SYSTEM | 01/15/21 | Trimeric human Arginase 1 in complex with mAb3 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Gomez-Llorente, Y., Scapin, G., Palte, R.L. | 4.04 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5w9i | G | H | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/23/17 | MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4 | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Pallesen, J., Ward, A.B. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3piq | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 11/07/10 | Crystal structure of human 2909 Fab, a quaternary structure-specific antibody against HIV-1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Changela, A., Gorny, M.K., Zolla-Pazner, S., Kwong, P.D. | 3.325 | X-RAY DIFFRACTION | 0.299 | 0.236 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
7km6 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/02/20 | APOBEC3B antibody 5G7 Fv-clasp | HOMO SAPIENS | homo sapiens | homo sapiens | null | Tang, H., Shi, K., Aihara, H. | 1.67 | X-RAY DIFFRACTION | 0.238 | 0.189 | false | true | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
7ki4 | G | F | 0 | E | protein | null | fusion glycoprotein f0 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/23/20 | Structure of the NiV F glycoprotein in complex with the 12B2 neutralizing antibody | NIPAH VIRUS; MUS MUSCULUS | mus musculus | mus musculus | nipah virus | Dang, H.V., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGKV12 | Kappa | null | null | null | null | null |
4jo2 | I | M | 0 | Q | peptide | null | gp120 | IMMUNE SYSTEM/VIRAL PROTEIN | 03/16/13 | Crystal structure of rabbit mAb R56 Fab in complex with V3 crown of HIV-1 Consensus A gp120 | ORYCTOLAGUS CUNICULUS; HUMAN IMMUNODEFICIENCY VIRUS 1 | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | Pan, R.M., Kong, X.P. | 2.5 | X-RAY DIFFRACTION | 0.265 | 0.190 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6wg0 | H | L | 0 | P | peptide | null | npna3 peptide | IMMUNE SYSTEM | 04/04/20 | Crystal structure of Fab366 in complex with NPNA3 peptide from circumsporozoite protein | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Pholcharee, T., Oyen, D., Wilson, I.A. | 1.599 | X-RAY DIFFRACTION | 0.211 | 0.189 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3uzq | A | a | 0 | B | protein | null | envelope protein | IMMUNE SYSTEM | 12/07/11 | Crystal structure of the dengue virus serotype 1 envelope protein domain III in complex with the variable domains of Mab 4E11 | MUS MUSCULUS; DENGUE VIRUS 1 | mus musculus | null | dengue virus 1 | Cockburn, J.J.B., Navarro Sanchez, M.E., Fretes, N., Urvoas, A., Staropoli, I., Kikuti, C.M., Coffey, L.L., Arenzana Seisdedos, F., Bedouelle, H., Rey, F.A. | 1.6 | X-RAY DIFFRACTION | 0.188 | 0.176 | true | true | unknown | unknown | unknown | 0 | -13.76002 | ELISA | null | TBD |
2mkw | null | A | 3 | null | null | null | null | IMMUNE SYSTEM | 02/13/14 | Solution Structure of 6aJl2 and 6aJL2-R24G Amyloidogenics Light Chain Proteins | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
7fcq | H | L | 0 | A | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 07/15/21 | Crystallographic structure of neutralizing antibody P14-44 in complex with SARS-CoV-2 spike receptor-binding Domain (RBD) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zheng, P., Jin, T. | 1.89 | X-RAY DIFFRACTION | 0.201 | 0.165 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
5c7x | H | L | 0 | A | protein | null | granulocyte-macrophage colony-stimulating factor | IMMUNE SYSTEM | 06/25/15 | Crystal structure of MOR04357, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Eylenstein, R., Weinfurtner, D., Steidl, S., Boettcher, J., Augustin, M. | 2.95 | X-RAY DIFFRACTION | 0.276 | 0.234 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -16.913816 | Unknown | null | TBD |
4bjl | null | A | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/26/95 | LOCW, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN) CRYSTALLIZED IN DISTILLED WATER | HOMO SAPIENS | null | homo sapiens | null | Schiffer, M., Huang, D.B. | 2.4 | X-RAY DIFFRACTION | unknown | unknown | false | false | null | IGLV1 | Lambda | null | null | null | null | null |
1xgu | B | A | 0 | C | protein | null | unknown protein | IMMUNE SYSTEM | 09/17/04 | Structure for antibody HyHEL-63 Y33F mutant complexed with hen egg lysozyme | MUS MUSCULUS; GALLUS GALLUS | null | null | escherichia coli | Li, Y., Huang, Y., Swaminathan, C.P., Smith-Gill, S.J., Mariuzza, R.A. | 2.1 | X-RAY DIFFRACTION | 0.239 | 0.223 | false | true | IGHV3 | IGKV5 | Kappa | null | null | null | null | null |
7bpk | C | D | 0 | A | protein | null | envelope protein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/23/20 | Zika virus envelope protein mutant bound to mAb | ZIKA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | zika virus | Dai, L., Qi, J., Gao, G.F. | 3.1 | X-RAY DIFFRACTION | 0.268 | 0.232 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7cwm | I | K | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/29/20 | Complex of SARS-CoV-2 spike protein and Fab P17 with one RBD in open state and two RBD in closed state | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, N., Wang, X. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6x9v | H | L | 0 | B | A | protein | protein | NA | NA | hiv-1 envelope glycoprotein bg505 sosip.664 gp41 | hiv-1 envelope glycoprotein bg505 sosip.664 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/03/20 | HIV-1 Envelope Glycoprotein BG505 SOSIP.664, expressed in HEK293S cells and deglycosylated by endoglycosidase H, in complex with RM20A3 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Berndsen, Z.T., Ward, A.B. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6xul | C | D | 0 | null | null | null | null | ANTITUMOR PROTEIN | 01/20/20 | Apo Ab 5b1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Diskin, R., Borenstein-Katz, A. | 2.41 | X-RAY DIFFRACTION | 0.230 | 0.168 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7lsg | H | L | 0 | C | protein | null | core protein | IMMUNE SYSTEM/VIRAL PROTEIN | 02/18/21 | Crystal structure of the human neutralizing antibody Fab fragment T025 bound to TBEV EDIII (Siberian Subtype) | HOMO SAPIENS; TICK-BORNE ENCEPHALITIS VIRUS | homo sapiens | homo sapiens | tick-borne encephalitis virus | Keeffe, J.R., Bjorkman, P.J. | 1.86 | X-RAY DIFFRACTION | 0.212 | 0.187 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7rcs | H | L | 0 | C | peptide | null | circumsporozoite protein | IMMUNE SYSTEM | 07/08/21 | Crystal structure of PfCSP peptide 21 with vaccine-elicited human anti-malaria antibody m43.160 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | plasmodium falciparum | Xu, K., Kwong, P.D. | 2.4 | X-RAY DIFFRACTION | 0.253 | 0.188 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6n5e | E | D | 0 | A | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 11/21/18 | Broadly protective antibodies directed to a subdominant influenza hemagglutinin epitope | INFLUENZA A VIRUS; MUS MUSCULUS | influenza a virus | mus musculus | influenza a virus | Bajic, G., Schmidt, A.G. | 3.0 | X-RAY DIFFRACTION | 0.287 | 0.250 | false | true | IGHV5 | IGLV1 | Lambda | null | null | null | null | null |
6njl | I | i | 0 | C | protein | null | glutamate receptor 1 | MEMBRANE PROTEIN/IMMUNE SYSTEM | 01/03/19 | structure of a complex | MUS MUSCULUS; RATTUS NORVEGICUS | mus musculus | null | rattus norvegicus | Gouaux, E., Zhao, Y. | 6.7 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6uup | B | b | 0 | null | null | null | null | ANTITUMOR PROTEIN | 10/31/19 | Structure of anti-hCD33 conditional scFv | CAMELIDAE MIXED LIBRARY | camelidae mixed library | null | null | Kimberlin, C.R., Park, S. | 2.20002 | X-RAY DIFFRACTION | 0.237 | 0.197 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7sfx | G | H | 0 | null | null | null | null | IMMUNE SYSTEM | 10/04/21 | 10A1 Fab in complex with CD99 peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Romero, L.A., Hattori, T., Koide, S. | 3.1 | X-RAY DIFFRACTION | 0.248 | 0.226 | false | true | IGHV6 | IGLV3 | Lambda | null | null | null | null | null |
1n0x | K | M | 0 | R | peptide | null | b2.1 peptide | IMMUNE SYSTEM | 10/15/02 | Crystal Structure of a Broadly Neutralizing Anti-HIV-1 Antibody in Complex with a Peptide Mimotope | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Saphire, E.O., Montero, M., Menendez, A., Irving, M.B., Zwick, M.B., Parren, P.W.H.I., Burton, D.R., Scott, J.K., Wilson, I.A. | 1.8 | X-RAY DIFFRACTION | 0.252 | 0.220 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6z7y | D | C | 0 | F | E | peptide | peptide | NA | NA | insulin | insulin | HORMONE | 06/02/20 | Human insulin in complex with the analytical antibody OXI-005 Fab | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | homo sapiens | Johansson, E. | 2.2 | X-RAY DIFFRACTION | 0.253 | 0.217 | false | true | IGHV5 | IGKV19 | Kappa | null | null | null | null | null |
7lq7 | T | U | 0 | B | protein | null | spike protein s1 | IMMUNE SYSTEM | 02/13/21 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CV503 and COVA1-16 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Zhu, X., Wilson, I.A. | 3.4 | X-RAY DIFFRACTION | 0.233 | 0.197 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6tnp | F | E | 0 | I | unknown | NO8 | unknown | IMMUNE SYSTEM | 12/09/19 | Crystal structure of the ScFv-5E5 in complex with a Tn glycopeptide | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Macias-Leon, J., Corzana, F., Hurtado-Guerrero, R. | 3.0 | X-RAY DIFFRACTION | 0.251 | 0.203 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
7l6v | E | null | 0 | A | protein | null | bont/a | ANTITOXIN | 12/24/20 | Crystal structure of BoNT/A-LC-JPU-A5-JPU-C1-JPU-H7-JPU-D12-ciA-F12 | CLOSTRIDIUM BOTULINUM; VICUGNA PACOS | vicugna pacos | null | clostridium botulinum | Lam, K., Jin, R. | 2.01 | X-RAY DIFFRACTION | 0.234 | 0.197 | false | true | IGHV1 | null | null | null | null | null | null | null |
2kqn | null | B | 9 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
2fx9 | I | M | 0 | Q | peptide | null | fragment of hiv glycoprotein gp41 | IMMUNE SYSTEM | 02/03/06 | Crystal structure of hiv-1 neutralizing human fab 4e10 in complex with a thioether-linked peptide encompassing the 4e10 epitope on gp41 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Cardoso, R.M.F., Brunel, F.M., Ferguson, S., Burton, D.R., Dawson, P.E., Wilson, I.A. | 2.1 | X-RAY DIFFRACTION | 0.271 | 0.236 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -10.59 | SPR | null | 17125793 |
6huo | G | null | 0 | A | E | protein | protein | NA | NA | gamma-aminobutyric acid receptor subunit alpha-1,gamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 10/09/18 | CryoEM structure of human full-length heteromeric alpha1beta3gamma2L GABA(A)R in complex with alprazolam (Xanax), GABA and megabody Mb38. | BOS TAURUS; HOMO SAPIENS; LAMA GLAMA | lama glama | null | bos taurus, homo sapiens | homo sapiens | Masiulis, S., Desai, R., Uchanski, T., Serna Martin, I., Laverty, D., Karia, D., Malinauskas, T., Jasenko, Z., Pardon, E., Kotecha, A., Steyaert, J., Miller, K.W., Aricescu, A.R. | 3.26 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
7ndd | H | L | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN, IMMUNE SYSTEM | 01/30/21 | EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-159 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D. | 4.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3j42 | G | H | 0 | E | protein | null | prm | VIRUS/IMMUNE SYSTEM | 06/13/13 | Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody | MUS MUSCULUS; DENGUE VIRUS 2 | mus musculus | mus musculus | dengue virus 2 | Wang, Z., Pennington, J.G., Jiang, W., Rossmann, M.G. | 21 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV6 | Kappa | null | null | null | null | null |
7sn2 | H | L | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM | 10/27/21 | Structure of human SARS-CoV-2 neutralizing antibody C1C-A3 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Pan, J., Abraham, J., Yang, P., Shankar, S. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7lkf | H | L | 0 | A | protein | null | sterol regulatory element-binding protein cleavage-activating protein | LIPID BINDING PROTEIN | 02/02/21 | WT Chicken Scap L1-L7 / Fab 4G10 complex focused refinement | GALLUS GALLUS; MUS MUSCULUS | mus musculus | mus musculus | gallus gallus | Kober, D.L., Radhakrishnan, A., Goldstein, J.L., Brown, M.S., Clark, L.D., Bai, X.-C., Rosenbaum, D.M. | 2.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV10 | Kappa | null | null | null | null | null |
6fg1 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/09/18 | CRYSTAL STRUCTURE OF FAB OF NATALIZUMAB IN COMPLEX WITH FAB OF NAA32. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bertrand, T., Pouzieux, S. | 2.03 | X-RAY DIFFRACTION | 0.285 | 0.266 | false | true | IGHV1 | IGKV19 | Kappa | null | null | null | null | null |
6udj | K | L | 0 | J | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 09/19/19 | HIV-1 bNAb 1-18 in complex with BG505 SOSIP.664 and 10-1074 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Abernathy, M.E., Barnes, C.O., Gristick, H.B., Bjorkman, P.J. | 2.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
4rgn | F | G | 0 | S | protein | null | enterotoxin type b | TOXIN/IMMUNE SYSTEM | 09/30/14 | Structure of Staphylococcal Enterotoxin B bound to two neutralizing antibodies, 14G8 and 6D3 | STAPHYLOCOCCUS AUREUS; MUS MUSCULUS | mus musculus | mus musculus | staphylococcus aureus | Franklin, M.C., Dutta, K., Varshney, A.K., Goger, M.J., Fries, B.C. | 2.698 | X-RAY DIFFRACTION | 0.278 | 0.240 | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
2hfe | A | B | 0 | C | protein | null | kcsa channel | MEMBRANE PROTEIN | 06/23/06 | Rb+ complex of a K channel with an amide to ester substitution in the selectivity filter | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Valiyaveetil, F.I., MacKinnon, R., Muir, T.W. | 2.25 | X-RAY DIFFRACTION | 0.251 | 0.232 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
7wpf | W | null | 0 | null | null | null | null | VIRAL PROTEIN | 01/23/22 | SARS-CoV-2 Omicron Variant S Trimer complexed with three JMB2002 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS; LAMA GLAMA | lama glama | null | null | Yin, W., Xu, Y., Xu, P., Cao, X., Wu, C., Gu, C., He, X., Wang, X., Huang, S., Yuan, Q., Wu, K., Hu, W., Huang, Z., Liu, J., Wang, Z., Jia, F., Xia, K., Liu, P., Wang, X., Song, B., Zheng, J., Jiang, H., Cheng, X., Jiang, Y., Deng, S.J., Xu, H.E. | 2.92 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
5y9f | d | c | 0 | J | protein | null | major capsid protein l1 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/24/17 | Crystal structure of HPV59 pentamer in complex with the Fab fragment of antibody 28F10 | HUMAN PAPILLOMAVIRUS TYPE 59; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 59 | Li, S.W., Li, Z.H. | 3.35 | X-RAY DIFFRACTION | 0.261 | 0.230 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
6u52 | A | null | 0 | B | protein | null | nucleoprotein | IMMUNE SYSTEM | 08/26/19 | Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB) Complexed with Sudan ebolavirus Nucleoprotein C-terminal Domain 634-738 | LAMA GLAMA; SUDAN EBOLAVIRUS (STRAIN BONIFACE-76) | lama glama | null | sudan ebolavirus (strain boniface-76) | Taylor, A.B., Sherwood, L.J., Hart, P.J., Hayhurst, A. | 1.9 | X-RAY DIFFRACTION | 0.243 | 0.198 | false | true | unknown | unknown | unknown | null | null | null | null | null |
2mcg | null | 1 | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/09/89 | THREE-DIMENSIONAL STRUCTURE OF A LIGHT CHAIN DIMER CRYSTALLIZED IN WATER. CONFORMATIONAL FLEXIBILITY OF A MOLECULE IN TWO CRYSTAL FORMS | HOMO SAPIENS | null | homo sapiens | null | Ely, K.R., Herron, J.N., Edmundson, A.B. | 2.0 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
1vhp | A | null | 5 | null | null | null | null | IMMUNOGLOBULIN | 04/16/96 | VH-P8, NMR | HOMO SAPIENS | homo sapiens | null | null | Riechmann, L. | NOT | SOLUTION NMR | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
5uk2 | I | i | 0 | E | protein | null | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/19/17 | CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 4 | INFLUENZA A VIRUS; HOMO SAPIENS; INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1)) | homo sapiens | null | influenza a virus (a/solomonislands/3/2006(h1n1)) | Liu, Y., Pan, J., Caradonna, T., Jenni, S., Raymond, D.D., Schmidt, A.G., Harrison, S.C., Grigorieff, N. | 4.8 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6x3t | K | L | 0 | D | protein | null | gamma-aminobutyric acid receptor subunit alpha-1 | MEMBRANE PROTEIN | 05/21/20 | Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus propofol | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Kim, J.J., Gharpure, A., Teng, J., Zhuang, Y., Howard, R.J., Zhu, S., Noviello, C.M., Walsh, R.M., Lindahl, E., Hibbs, R.E. | 2.55 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
6v7y | F | null | 0 | A | protein | null | antigen-presenting glycoprotein cd1d | IMMUNE SYSTEM | 12/10/19 | Human CD1d presenting alpha-Galactosylceramide in complex with VHH nanobody 1D5 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Shahine, A., Rossjohn, J. | 2.4 | X-RAY DIFFRACTION | 0.276 | 0.241 | false | true | IGHV1 | null | null | null | null | null | null | null |
7t3d | C | D | 0 | A | protein | null | hemagglutinin ha1 chain | Viral Protein/IMMUNE SYSTEM | 12/07/21 | CryoEM map of anchor 222-1C06 Fab and lateral patch 2B05 Fab binding H1 HA | INFLUENZA A VIRUS (A/CALIFORNIA/04/2009(H1N1)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/california/04/2009(h1n1)) | Han, J., Ward, A.B. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4xmk | J | N | 0 | R | peptide | null | hiv-1 jr-fl gp120 v3 peptide | immune system/viral protein | 01/14/15 | Crystal structure of Fab of HIV-1 gp120 V3-specific human monoclonal antibody 2424 in complex with JR-FL V3 peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kong, X.-P., Pan, R. | 3.179 | X-RAY DIFFRACTION | 0.283 | 0.225 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
6w1c | K | O | 0 | E | protein | null | e2 glycoprotein | VIRUS/IMMUNE SYSTEM | 03/04/20 | Human mAbs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the MXR8 receptor binding domain | MAYARO VIRUS (STRAIN BRAZIL); HOMO SAPIENS | homo sapiens | homo sapiens | mayaro virus (strain brazil) | Miller, A.S., Kuhn, R.J. | 5.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
2kh2 | B | b | 52 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5a2k | H | h | 0 | P | peptide | null | antigen tn, thr is covalently bound to galnac | IMMUNE SYSTEM | 05/20/15 | Crystal structure of scFv-SM3 in complex with APD-TGalNAc-RP | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | Martinez-Saez, N., Castro-Lopez, J., Valero-Gonzalez, J., Madariaga, D., Companon, I., Somovilla, V.J., Salvado, M., Asensio, J.L., Jimenez-Barbero, J., Avenoza, A., Busto, J.H., Bernardes, G.J.L., Peregrina, J.M., Hurtado-Guerrero, R., Corzana, F. | 1.7 | X-RAY DIFFRACTION | 0.21619 | 0.17583 | true | true | unknown | unknown | unknown | 0 | -8.658567 | Unknown | null | TBD |
7rth | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/21 | Crystal structure of an anti-lysozyme nanobody in complex with an anti-nanobody Fab ""NabFab"" | HOMO SAPIENS | homo sapiens | homo sapiens | null | Filippova, E.V., Mukherjee, S., Bloch, J.S., Locher, K.P., Kossiakoff, A.A. | 3.19 | X-RAY DIFFRACTION | 0.267 | 0.216 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4rqq | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 11/04/14 | Crystal structure of human Fab PGDM1400, a broadly reactive and potent HIV-1 neutralizing antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Julien, J.-P., Wilson, I.A. | 3.1 | X-RAY DIFFRACTION | 0.253 | 0.221 | false | true | unknown | IGKV2 | Kappa | null | null | null | null | null |
6wps | C | D | 0 | B | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/27/20 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the S309 neutralizing antibody Fab fragment | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Pinto, D., Park, Y.J., Beltramello, M., Walls, A.C., Tortorici, M.A., Bianchi, S., Jaconi, S., Culap, K., Zatta, F., De Marco, A., Peter, A., Guarino, B., Spreafico, R., Cameroni, E., Case, J.B., Chen, R.E., Havenar-Daughton, C., Snell, G., Virgin, H.W., Lanzavecchia, A., Diamond, M.S., Fink, K., Veesler, D., Corti, D.... | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3ls4 | H | L | 0 | H | Hapten | TCI | (6AR,10AR)-6,6,9-TRIMETHYL-3-PENTYL-6A,7,8,10A-TETRAHYDRO-6H-BENZO[C]CHROMEN-1-OL | IMMUNE SYSTEM | 02/12/10 | Crystal Structure of Anti-tetrahydrocannabinol Fab Fragment in Complex with THC | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Niemi, M.H., Rouvinen, J. | 2.0 | X-RAY DIFFRACTION | 0.261 | 0.213 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
5mv3 | I | J | 0 | K | peptide | null | synthetic peptide containing the cii583-591 epitope ofcollagen type ii,collagen alpha-1(ii) chain,synthetic peptide containing the cii583-591 epitope of collagen type ii, | IMMUNE SYSTEM | 01/15/17 | ACC1 Fab fragment in complex with CII583-591 (CG10) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Holmdahl, R., Ge, C. | 2.95 | X-RAY DIFFRACTION | 0.261 | 0.202 | false | false | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
6m3c | H | L | 0 | A | protein | null | vitamin k-dependent protein c heavy chain | BLOOD CLOTTING/IMMUNE SYSTEM | 03/03/20 | hAPC-h1573 Fab complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wang, X., Wang, D., Zhao, X., Egner, U. | 3.7 | X-RAY DIFFRACTION | 0.302 | 0.278 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
1bfo | D | C | 0 | null | null | null | null | ANTIBODY | 05/20/98 | CAMPATH-1G IGG2B RAT MONOCLONAL FAB | RATTUS RATTUS | rattus rattus | rattus rattus | null | Cheetham, G.M.T., Hale, G., Waldmann, H., Bloomer, A.C. | 2.6 | X-RAY DIFFRACTION | 0.263 | 0.192 | false | false | IGHV7 | IGKV22 | Kappa | null | null | null | null | null |
7lok | M | L | 0 | C | protein | null | envelope glycoprotein bg505 sosip.664 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/10/21 | Structure of CD4 mimetic M48U1 in complex with BG505 SOSIP.664 HIV-1 Env trimer and 17b Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Jette, C.A., Bjorkman, P.J. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
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