pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6oz6 | H | null | 0 | D | protein | null | phospho-n-acetylmuramoyl-pentapeptide-transferase | MEMBRANE PROTEIN/TRANSFERASE | 05/15/19 | Crystal structure of MraY bound to 3'-hydroxymureidomycin A | LAMA GLAMA; AQUIFEX AEOLICUS (STRAIN VF5) | lama glama | null | aquifex aeolicus (strain vf5) | Mashalidis, E.H., Lee, S.Y. | 3.7 | X-RAY DIFFRACTION | 0.301 | 0.257 | false | true | IGHV1 | null | null | null | null | null | null | null |
1u8h | B | A | 0 | C | peptide | null | gp41 peptide | IMMUNE SYSTEM | 08/06/04 | Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ALDKWAS | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Bryson, S., Julien, J.-P., Hynes, R.C., Pai, E.F. | 2.1 | X-RAY DIFFRACTION | 0.236 | 0.221 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
7akd | H | L | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 09/30/20 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Fedry, J., Hurdiss, D.L., Wang, C., Li, W., Obal, G., Drulyte, I., Howes, S.C., van Kuppeveld, F.J.M., Foerster, F., Bosch, B.J. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
1n7m | L | H | 0 | L | Hapten | MMP | N-METHYLMESOPORPHYRIN | IMMUNE SYSTEM | 11/15/02 | Germline 7G12 with N-methylmesoporphyrin | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | mus musculus, homo sapiens | Yin, J., Andryski, S.E., Beuscher IV, A.E., Stevens, R.C., Schultz, P.G. | 1.8 | X-RAY DIFFRACTION | 0.253 | 0.220 | false | true | IGHV1 | IGKV6 | Kappa | 0.000002 | -7.78 | SPR | null | 12552112 |
3u7w | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 10/14/11 | Crystal structure of NIH45-46 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Diskin, R., Bjorkman, P.J. | 2.6 | X-RAY DIFFRACTION | 0.238 | 0.184 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
6k69 | null | A | 0 | B | protein | null | engineered t4 lysozyme | STRUCTURAL PROTEIN | 06/01/19 | Application of anti-helix antibodies in protein structure determination (9213-3LRH) | HOMO SAPIENS; ENTEROBACTERIA PHAGE T4 | null | homo sapiens | enterobacteria phage t4 | Lee, J.O., Jin, M.S., Kim, J.W., Kim, S., Lee, H., Cho, G.Y. | 2.401 | X-RAY DIFFRACTION | 0.234 | 0.204 | false | true | null | IGLV1 | Lambda | null | null | null | null | null |
3ogo | G | null | 0 | B | protein | null | green fluorescent protein | FLUORESCENT PROTEIN/IMMUNE SYSTEM | 08/17/10 | Structure of the GFP:GFP-nanobody complex at 2.8 A resolution in spacegroup P21212 | AEQUOREA VICTORIA; CAMELUS DROMEDARIUS | camelus dromedarius | null | aequorea victoria | Kubala, M.H., Kovtun, O., Alexandrov, K., Collins, B.M. | 2.8 | X-RAY DIFFRACTION | 0.253 | 0.202 | false | true | IGHV1 | null | null | 0 | -12.56 | Other | 37 | 20945358 |
4z5r | W | V | 0 | F | protein | null | interferon alpha-2 | Cytokine/Immune System | 04/02/15 | Rontalizumab Fab bound to Interferon-a2 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Eigenbrot, C., Maurer, B., Bosanac, I. | 3.0 | X-RAY DIFFRACTION | 0.251 | 0.223 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -14.658431 | SPR | null | TBD |
6bae | B | A | 0 | C | E | protein | protein | NA | NA | immunoglobulin g binding protein a | protein l | IMMUNE SYSTEM | 10/12/17 | Trastuzumab Fab v3 in complex with CQFDLSTRRLKC | MUS MUSCULUS; HOMO SAPIENS; FINEGOLDIA MAGNA; STAPHYLOCOCCUS AUREUS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | staphylococcus aureus | finegoldia magna | Bzymek, K.P., King, J.D., Williams, J.C. | 2.14 | X-RAY DIFFRACTION | 0.224 | 0.173 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7f58 | N | null | 0 | A | B | protein | protein | NA | NA | isoform gnas-2 of guanine nucleotide-binding protein g(s)subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 06/21/21 | Cryo-EM structure of THIQ-MC4R-Gs_Nb35 complex | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | homo sapiens | Zhang, H., Chen, L., Mao, C., Shen, Q., Yang, D., Shen, D., Qin, J. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
3iy2 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/09/09 | Variable domains of the computer generated model (WAM) of Fab 6 fitted into the cryoEM reconstruction of the virus-Fab 6 complex | MUS MUSCULUS | mus musculus | mus musculus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 18 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
7bnw | D | null | 0 | null | null | null | null | IMMUNE SYSTEM | 01/22/21 | Llama nanobody nb18 raised against GldL from Flavobacterium jonhsoniae | LAMA GLAMA | lama glama | null | null | Trinh, N.T., Cambillau, C., Leone, P. | 2.59 | X-RAY DIFFRACTION | 0.243 | 0.193 | false | true | IGHV1 | null | null | null | null | null | null | null |
6bit | J | L | 0 | G | protein | null | tyrosine-protein phosphatase non-receptor type substrate 1 | IMMUNE SYSTEM | 11/03/17 | SIRPalpha antibody complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Ring, N.G., Herndler-Brandstetter, D., Weiskopf, K., Shan, L., Volkmer, J.P., George, B.M., Lietzenmayer, M., McKenna, K.M., Naik, T.J., McCarty, A., Zheng, Y., Ring, A.M., Flavell, R.A., Weissman, I.L. | 2.191 | X-RAY DIFFRACTION | 0.240 | 0.210 | false | false | IGHV14 | IGKV4 | Kappa | 0 | -11.712072 | SPR | null | TBD |
3stz | A | B | 0 | C | protein | null | voltage-gated potassium channel | MEMBRANE PROTEIN | 07/11/11 | KcsA potassium channel mutant Y82C with nitroxide spin label | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Raghuraman, H., Cordero-Morales, J., Jogini, V., Perozo, E. | 2.5 | X-RAY DIFFRACTION | 0.285 | 0.246 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
4iml | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 01/03/13 | CrossFab binding to human Angiopoietin 2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Fenn, S., Schiller, C., Griese, J., Hopfner, K.-P., Kettenberger, H. | 2.931 | X-RAY DIFFRACTION | 0.269 | 0.237 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
7tet | H | L | 0 | B | A | protein | protein | NA | NA | glutamate receptor ionotropic, nmda 2b | glutamate receptor ionotropic, nmda 1 | SIGNALING PROTEIN/IMMUNE SYSTEM | 01/05/22 | Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 in non-active2-like conformation | RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | rattus norvegicus | Tajima, N., Furukawa, H. | 4.45 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
6jfi | H | L | 0 | E | protein | null | zikv structural protein e | VIRUS | 04/10/19 | The symmetric-reconstructed cryo-EM structure of Zika virus-FabZK2B10 complex | ZIKA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | zika virus | Wang, L., Wang, R.K., Wang, L., Ben, H.J., Yu, L., Gao, F., Shi, X.L., Yin, C.B., Zhang, F.C., Xiang, Y., Zhang, L.Q. | 11 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5yd4 | A | a | 0 | B | peptide | null | epitope peptide (mutation t6a) | IMMUNE SYSTEM | 09/11/17 | Crystal structure of the scFv antibody 4B08 with epitope peptide (mutation T6A) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | Caaveiro, J.M.M., Miyanabe, K., Tsumoto, K. | 1.35 | X-RAY DIFFRACTION | 0.173 | 0.135 | true | true | unknown | unknown | unknown | null | null | null | null | null |
1dn0 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 12/15/99 | STRUCTURE OF THE FAB FRAGMENT FROM A HUMAN IGM COLD AGGLUTININ | HOMO SAPIENS | homo sapiens | homo sapiens | null | Cauerhff, A., Braden, B., Carvalho, J.G., Leoni, J., Polikarpov, I., Goldbaum, F. | 2.28 | X-RAY DIFFRACTION | 0.240 | 0.180 | false | false | IGHV4 | IGKV3D | Kappa | null | null | null | null | null |
5i18 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/05/16 | CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV1-69/IGKV4-1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Teplyakov, A., Obmolova, G., Malia, T., Luo, J., Gilliland, G. | 1.92 | X-RAY DIFFRACTION | 0.213 | 0.167 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
5kov | C | c | 0 | A | protein | null | capsid polyprotein vp90 | VIRAL PROTEIN | 07/01/16 | Crystal structure of the human astrovirus 2 capsid protein spike in complex with a single chain variable fragment of an astrovirus neutralizing antibody at 3.24-A resolution | HUMAN ASTROVIRUS-2; MUS MUSCULUS | mus musculus | null | human astrovirus-2 | Bogdanoff, W.A., DuBois, R.M. | 3.245 | X-RAY DIFFRACTION | 0.288 | 0.241 | true | true | unknown | unknown | unknown | 0 | -11.907338 | SPR | null | TBD |
3l7f | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/28/09 | Structure of IL-13 antibody H2L6, A humanized variant OF C836 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L. | 2.6 | X-RAY DIFFRACTION | 0.243 | 0.205 | false | true | IGHV2 | IGKV3 | Kappa | null | null | null | null | null |
2qr0 | R | Q | 0 | P | protein | null | vascular endothelial growth factor a | IMMUNE SYSTEM | 07/27/07 | Structure of VEGF complexed to a Fab containing TYR and SER in the CDRs | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wiesmann, C. | 3.5 | X-RAY DIFFRACTION | 0.312 | 0.291 | false | false | IGHV3 | IGKV1 | Kappa | 0 | -11.5 | SPR | 37 | 17825836 |
7zfb | N | null | 0 | F | protein | null | spike protein s1 | VIRAL PROTEIN | 04/01/22 | SARS-CoV-2 Omicron RBD in complex with nanobody C1, Omi-18 and Omi-31 Fabs | LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | lama glama | null | severe acute respiratory syndrome coronavirus2 | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 3.08 | X-RAY DIFFRACTION | 0.308 | 0.261 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ri1 | B | null | 0 | A | protein | null | glycoprotein 120 | IMMUNE SYSTEM | 07/19/21 | Crystal structure of anti-HIV llama VHH antibody A12 in complex with HIV-1 C1086 gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; LAMA GLAMA | lama glama | null | human immunodeficiency virus 1 | Zhou, T., Kwong, P.D. | 2.55 | X-RAY DIFFRACTION | 0.225 | 0.176 | false | true | unknown | unknown | unknown | null | null | null | null | null |
1cgs | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 10/06/93 | LOCAL AND TRANSMITTED CONFORMATIONAL CHANGES ON COMPLEXATION OF AN ANTI-SWEETENER FAB | MUS MUSCULUS | null | mus musculus | null | Guddat, L.W., Shan, L., Edmundson, A.B. | 2.6 | X-RAY DIFFRACTION | unknown | 0.218 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6pxh | C | D | 0 | A | protein | null | mers-cov s1-ntd | IMMUNE SYSTEM/Viral protein | 07/26/19 | Crystal Structure of MERS-CoV S1-NTD bound with G2 Fab | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Wang, N., McLellan, J.S. | 2.3 | X-RAY DIFFRACTION | 0.213 | 0.180 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7sn3 | null | E | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 10/27/21 | Structure of human SARS-CoV-2 spike glycoprotein trimer bound by neutralizing antibody C1C-A3 Fab (variable region) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | null | homo sapiens | severe acute respiratory syndrome coronavirus2 | Pan, J., Abraham, J., Shankar, S. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | null | IGKV3 | Kappa | null | null | null | null | null |
5jym | D | d | 0 | C | protein | null | cadherin-3 | CELL ADHESION/IMMUNE SYSTEM | 05/14/16 | Human P-cadherin EC12 with scFv TSP11 bound | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Caaveiro, J.M.M., Kudo, S., Tsumoto, K. | 2.45 | X-RAY DIFFRACTION | 0.270 | 0.223 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7cec | H | I | 0 | B | protein | null | integrin beta-1 | CELL ADHESION/IMMUNE SYSTEM | 06/22/20 | Structure of alpha6beta1 integrin in complex with laminin-511 | HOMO SAPIENS; MUS MUSCULUS | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Arimori, T., Miyazaki, N., Takagi, J. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV8 | IGKV4 | Kappa | null | null | null | null | null |
6w41 | H | L | 0 | C | protein | null | spike glycoprotein receptor binding domain | IMMUNE SYSTEM/VIRAL PROTEIN | 03/09/20 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with human antibody CR3022 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Wu, N.C., Zhu, X.Y., Wilson, I.A. | 3.084 | X-RAY DIFFRACTION | 0.243 | 0.223 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
6tke | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/28/19 | ChiLob 7/4 H2 HC-C224S Kappa LC-C214S F(ab')2 | HOMO SAPIENS | null | null | null | Orr, C.M., Fisher, H., Tews, I. | 2.35 | X-RAY DIFFRACTION | 0.245 | 0.192 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
3oke | B | A | 0 | B | carbohydrate | KO2 | PROP-2-EN-1-YL D-GLYCERO-ALPHA-D-TALO-OCT-2-ULOPYRANOSIDONIC ACID | IMMUNE SYSTEM | 08/24/10 | Crystal structure of S25-39 in complex with Ko | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Blackler, R.J., Evans, S.V. | 2.4 | X-RAY DIFFRACTION | 0.289 | 0.221 | false | false | IGHV7 | IGKV8 | Kappa | null | null | null | null | null |
6ldy | A | B | 0 | C | peptide | null | methylated peptide | IMMUNE SYSTEM | 11/23/19 | Structure antibody D6 in complex with methylated peptide | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Caaveiro, J.M.M., Tsumoto, K. | 1.77 | X-RAY DIFFRACTION | 0.218 | 0.185 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1bfo | H | G | 0 | null | null | null | null | ANTIBODY | 05/20/98 | CAMPATH-1G IGG2B RAT MONOCLONAL FAB | RATTUS RATTUS | rattus rattus | rattus rattus | null | Cheetham, G.M.T., Hale, G., Waldmann, H., Bloomer, A.C. | 2.6 | X-RAY DIFFRACTION | 0.263 | 0.192 | false | false | IGHV7 | IGKV22 | Kappa | null | null | null | null | null |
7a29 | D | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/16/20 | Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing sybodies (Sb23) 2-up conformation | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 2.94 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
1eeu | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 02/03/00 | M4L/Y(27D)D/Q89D/T94H mutant of LEN | HOMO SAPIENS | null | homo sapiens | null | Pokkuluri, P.R., Cai, X., Gu, M., Stevens, F.J., Schiffer, M. | 1.6 | X-RAY DIFFRACTION | 0.222 | 0.194 | false | true | null | IGKV4 | Kappa | null | null | null | null | null |
1mcr | null | A | 0 | P | peptide | null | peptide n-acetyl-l-his-d-pro-oh | IMMUNOGLOBULIN | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | HOMO SAPIENS | null | homo sapiens | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
3stl | A | B | 0 | C | protein | null | voltage-gated potassium channel | MEMBRANE PROTEIN | 07/11/11 | KcsA potassium channel mutant Y82C with Cadmium bound | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Raghuraman, H., Cordero-Morales, J., Jogini, V., Perozo, E. | 2.4 | X-RAY DIFFRACTION | 0.263 | 0.227 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
6dc5 | H | I | 0 | G | protein | null | rsv fusion glycoprotein | IMMUNE SYSTEM | 05/04/18 | RSV prefusion F in complex with AM22 Fab | HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human respiratory syncytial virus a (straina2), human immunodeficiency virus 1 | Jones, H.G., McLellan, J.S. | 3.5 | X-RAY DIFFRACTION | 0.280 | 0.217 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5xaj | E | C | 0 | null | null | null | null | IMMUNE SYSTEM | 03/13/17 | Structural mimicry of the dengue virus envelope glycoprotein revealed by the crystallographic study of an idiotype-anti-idiotype Fab complex. | DENGUE VIRUS | dengue virus | dengue virus | null | Wong, Y.H., Goh, B.C., Lescar, J. | 2.5 | X-RAY DIFFRACTION | 0.239 | 0.185 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
3so3 | C | B | 0 | A | protein | null | suppressor of tumorigenicity 14 protein | HYDROLASE | 06/29/11 | Structures of Fab-Protease Complexes Reveal a Highly Specific Non-Canonical Mechanism of Inhibition. | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Schneider, E.L., Farady, C.J., Egea, P.F., Goetz, D.H., Baharuddin, A., Craik, C.S. | 2.1 | X-RAY DIFFRACTION | 0.194 | 0.161 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
2mkw | null | A | 8 | null | null | null | null | IMMUNE SYSTEM | 02/13/14 | Solution Structure of 6aJl2 and 6aJL2-R24G Amyloidogenics Light Chain Proteins | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
2otw | B | A | 0 | E | peptide | null | poly-gln peptide antigen | IMMUNE SYSTEM | 02/09/07 | Crystal structure of Fv polyglutamine complex | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Li, P. | 2.35 | X-RAY DIFFRACTION | 0.258 | 0.226 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
6psc | C | c | 0 | null | null | null | null | IMMUNE SYSTEM | 06/17/20 | Antibody scFv-M204 trimeric state | ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | null | null | Abskharon, R., Sawaya, M.R., Seidler, P.M., Cascio, D., Eisenberg, D.S. | 3.6 | X-RAY DIFFRACTION | 0.282 | 0.252 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4om0 | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/25/14 | Crystal structure of antibody VRC07-G54Y in complex with clade A/E 93TH057 HIV-1 gp120 core | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kwon, Y.D., Kwong, P.D. | 2.289 | X-RAY DIFFRACTION | 0.247 | 0.191 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
2mmx | null | A | 19 | null | null | null | null | IMMUNE SYSTEM | 03/20/14 | NMR study of 6aJL2 | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
5uk4 | b | null | 0 | B | protein | null | anti-vesicular stomatitis virus n vhh | Viral Protein/RNA/Immune System | 01/19/17 | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | VESICULAR STOMATITIS INDIANA VIRUS (STRAIN SAN JUAN); VICUGNA PACOS | vicugna pacos | null | vesicular stomatitis indiana virus (strain sanjuan) | Hanke, L., Knockenhauer, K.E., Ploegh, H.L., Schwartz, T.U. | 3.204 | X-RAY DIFFRACTION | 0.288 | 0.237 | false | false | IGHV1 | null | null | null | null | null | null | null |
5mvz | H | L | 0 | U | protein | null | interleukin-1 beta | SIGNALING PROTEIN | 01/17/17 | Fab 4AB007 bound to Interleukin-1-beta | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Stark, W., Seibert, V. | 2.15 | X-RAY DIFFRACTION | 0.281 | 0.219 | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
5bo1 | I | M | 0 | A | protein | null | protein jagged-1 | Signaling protein/Immune system | 05/26/15 | Crystal structure of a human Jag1 fragment in complex with an anti-Jag1 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Payandeh, J., de Leon-Boenig, G. | 2.56 | X-RAY DIFFRACTION | 0.259 | 0.220 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -12.417858 | SPR | null | TBD |
4om1 | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/25/14 | Crystal structure of antibody VRC07-I30Q, G54W, S58N in complex with clade A/E 93TH057 HIV-1 gp120 core | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kwon, Y.D., Kwong, P.D. | 2.131 | X-RAY DIFFRACTION | 0.226 | 0.191 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
5kaq | F | G | 0 | C | protein | null | hemagglutinin | IMMUNE SYSTEM | 06/01/16 | Crystal structure of broadly neutralizing Influenza A antibody 31.a.83 in complex with Hemagglutinin Hong Kong 1968. | INFLUENZA A VIRUS (A/HONG KONG/1-4-MA21-1/1968(H3N2)) | influenza a virus (a/hong kong/1-4-ma21-1/1968(h3n2)) | influenza a virus (a/hong kong/1-4-ma21-1/1968(h3n2)) | influenza a virus (a/hong kong/1-4-ma21-1/1968(h3n2)) | Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D. | 3.514 | X-RAY DIFFRACTION | 0.313 | 0.270 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
4n8c | H | L | 0 | X | peptide | null | extracellular domain of influenza matrix protein 2 | IMMUNE SYSTEM | 10/17/13 | Three-dimensional structure of the extracellular domain of Matrix protein 2 of influenza A virus | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | influenza a virus (a/puerto rico/8/1934(h1n1)) | Cho, K.J., Seok, J.H., Kim, S., Roose, K., Schepens, B., Fiers, W., Saelens, X., Kim, K.H. | 1.6 | X-RAY DIFFRACTION | 0.242 | 0.193 | false | false | IGHV1 | IGKV8 | Kappa | 0 | -12.821084 | Unknown | null | TBD |
6xym | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 01/30/20 | Nbe-LBM | LAMA GLAMA | lama glama | null | null | Pompidor, G., Zimmermann, S., Loew, C., Schneider, T. | 1.2 | X-RAY DIFFRACTION | 0.198 | 0.154 | false | true | IGHV1 | null | null | null | null | null | null | null |
6me1 | A | B | 0 | F | peptide | null | envelope glycoprotein gp160 | VIRAL PROTEIN | 09/05/18 | Crystal structure of the clade B isolate B41 mutant fusion peptide (residues 512-521) in complex with VRC34.01 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus type 1 | Kumar, S., Sarkar, A., Wilson, I.A. | 1.97 | X-RAY DIFFRACTION | 0.238 | 0.199 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5u8q | H | L | 0 | A | protein | null | insulin-like growth factor 1 receptor | TRANSFERASE | 12/14/16 | Structure of the ectodomain of the human Type 1 insulin-like growth factor receptor in complex with IGF-I | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Lawrence, M., Xu, Y. | 3.27104 | X-RAY DIFFRACTION | 0.303 | 0.260 | false | true | IGHV1 | IGKV5 | Kappa | 0.000002 | -7.666764 | ITC | null | TBD |
1ic5 | H | L | 0 | Y | protein | null | lysozyme c | PROTEIN BINDING/HYDROLASE | 03/30/01 | CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD99A)-HEN LYSOZYME COMPLEX | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Shiroishi, M., Yokota, A., Tsumoto, K., Kondo, H., Nishimiya, Y., Horii, K., Matsushima, M., Ogasahara, K., Yutani, K., Kumagai, I. | 2.3 | X-RAY DIFFRACTION | 0.252 | 0.165 | false | true | IGHV3 | IGKV5 | Kappa | null | null | null | null | null |
5vl2 | B | null | 0 | B | Hapten | 9EG | N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea | UNKNOWN FUNCTION | 04/24/17 | The hapten triclocarban bound to the single domain camelid nanobody VHH T4 | LAMA GLAMA | lama glama | null | lama glama | Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.9 | X-RAY DIFFRACTION | 0.263 | 0.219 | false | true | IGHV1 | null | null | null | null | null | null | null |
2kh2 | B | b | 71 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6urh | H | L | 0 | C | protein | null | hcv envelope glycoprotein e2 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/23/19 | Crystal structure of broadly neutralizing antibody AR3X in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain | HEPACIVIRUS C; HOMO SAPIENS | homo sapiens | homo sapiens | hepacivirus c | Flyak, A.I., Bjorkman, P.J. | 2.2 | X-RAY DIFFRACTION | 0.233 | 0.187 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7kfh | G | J | 0 | A | protein | null | virion spike glycoprotein 1 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/13/20 | Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-437 | EBOLA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | ebola virus | Murin, C.D., Ward, A.B. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4r7n | I | J | 0 | null | null | null | null | IMMUNE SYSTEM | 08/28/14 | Fab C2E3 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Loyau, J., Didelot, G., Malinge, P., Ravn, U., Magistrelli, G., Depoisier, J.F., Kosco-Vilbois, M., Fischer, N., Thore, S., Rousseau, F. | 3.45 | X-RAY DIFFRACTION | 0.280 | 0.236 | false | true | IGHV4 | IGKV6 | Kappa | null | null | null | null | null |
6ye3 | D | E | 0 | F | protein | null | interleukin-2 | PROTEIN BINDING | 03/23/20 | IL-2 in complex with a Fab fragment from UFKA-20 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Karakus, U., Mittl, P., Boyman, O. | 2.89 | X-RAY DIFFRACTION | 0.283 | 0.215 | false | true | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
7fjo | H | L | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/04/21 | Cryo-EM structure of South African (B.1.351) SARS-CoV-2 spike glycoprotein in complex with three T6 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, X., Zhang, L., Zhang, S., Liang, Q. | 3.34 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
7z1e | F | null | 0 | E | protein | null | unknown | ANTIVIRAL PROTEIN | 02/24/22 | Nanobody H11-H4 Q98R H100E bound to RBD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | null | null | null | Mikolajek, H., Naismith, J.H. | 1.59 | X-RAY DIFFRACTION | 0.202 | 0.161 | false | false | IGHV1 | null | null | null | null | null | null | null |
6n8d | D | B | 0 | A | protein | null | major capsid protein | IMMUNE SYSTEM | 11/29/18 | Crystal structure of GII.4 2002 norovirus P domain in complex with neutralizing human antibody A1431 | NOROVIRUS HU/GII.4/FARMINGTON HILLS/2004/USA; HOMO SAPIENS | homo sapiens | homo sapiens | norovirus hu/gii.4/farmington hills/2004/usa | Changela, A., Verardi, R., Kwong, P.D. | 3.1 | X-RAY DIFFRACTION | 0.227 | 0.176 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7lf0 | F | H | 0 | C | protein | null | arginase-1 | HYDROLASE/IMMUNE SYSTEM | 01/15/21 | Trimeric human Arginase 1 in complex with mAb2 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Gomez-Llorente, Y., Scapin, G., Palte, R.L. | 3.68 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6xw4 | D | null | 0 | B | protein | null | capsid protein | VIRAL PROTEIN | 01/23/20 | Crystal structure of murine norovirus P domain in complex with Nanobody NB-5867 | MURINE NOROVIRUS 1; VICUGNA PACOS | vicugna pacos | null | murine norovirus 1 | Kilic, T., Sabin, C., Hansman, G. | 2.19 | X-RAY DIFFRACTION | 0.218 | 0.173 | false | true | IGHV1 | null | null | null | null | null | null | null |
2q1e | null | C | 0 | null | null | null | null | PROTEIN FIBRIL | 05/24/07 | Altered dimer interface decreases stability in an amyloidogenic kappa1 Bence Jones protein. | HOMO SAPIENS | null | homo sapiens | null | Thompson, J.R., Ramirez-Alvarado, M., Baden, E.M. | 2.55 | X-RAY DIFFRACTION | 0.206 | 0.165 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
4jo4 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/16/13 | Crystal structure of rabbit mAb R20 Fab | ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | null | Pan, R.M., Kong, X.P. | 2.27 | X-RAY DIFFRACTION | 0.226 | 0.184 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6mtn | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM/INHIBITOR | 10/20/18 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor Compound 484 in Complex with Human Antibodies 3H109L and 35O22 at 3.0 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.5 | X-RAY DIFFRACTION | 0.263 | 0.223 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
1mcl | null | B | 0 | P | peptide | null | n-acetyl-d-his-l-pro-oh | IMMUNOGLOBULIN | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | null | null | null | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
3qum | B | A | 0 | P | protein | null | prostate-specific antigen | IMMUNE SYSTEM | 02/24/11 | Crystal structure of human prostate specific antigen (PSA) in Fab sandwich with a high affinity and a PCa selective antibody | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Stura, E.A., Muller, B.H., Michel, S., Ducancel, F. | 3.2 | X-RAY DIFFRACTION | 0.294 | 0.198 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1g7i | B | A | 0 | C | protein | null | lysozyme c | HYDROLASE INHIBITOR/HYDROLASE | 11/10/00 | CRYSTAL STRUCTURE OF HEN EGG WHITE LYSOZYME (HEL) COMPLEXED WITH THE MUTANT ANTI-HEL MONOCLONAL ANTIBODY D1.3 (VLW92F) | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Sundberg, E.J., Urrutia, M., Braden, B.C., Isern, J., Mariuzza, R.A. | 1.8 | X-RAY DIFFRACTION | 0.248 | 0.188 | false | true | IGHV2 | IGKV12 | Kappa | null | null | null | null | null |
1dbb | H | L | 0 | H | Hapten | STR | PROGESTERONE | IMMUNOGLOBULIN | 11/11/92 | THREE-DIMENSIONAL STRUCTURE OF AN ANTI-STEROID FAB' AND PROGESTERONE-FAB' COMPLEX | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Arevalo, J.H., Wilson, I.A. | 2.7 | X-RAY DIFFRACTION | unknown | 0.210 | false | true | IGHV9 | IGKV1 | Kappa | 0 | -12.278197 | Unknown | null | TBD |
6h71 | D | null | 0 | B | protein | null | capsid protein vp1 | VIRAL PROTEIN | 07/30/18 | GI.1 human norovirus protruding domain in complex with Nano-94 | NORWALK VIRUS (STRAIN GI/HUMAN/UNITED STATES/NORWALK/1968); VICUGNA PACOS | vicugna pacos | null | norwalk virus (strain gi/human/unitedstates/norwalk/1968) | Kilic, T., Hansman, G.S. | 2.313 | X-RAY DIFFRACTION | 0.217 | 0.193 | false | true | IGHV1 | null | null | null | null | null | null | null |
6k2i | A | null | 17 | null | null | null | null | AFB1-BINDING PROTEIN | 05/14/19 | Solution structure of camelid nanobody Nb11 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., Li, S.L., He, T., Zhu, J., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6mg5 | null | A | 0 | B | Hapten | 6ZW | 7-(diethylamino)-4-methyl-2H-1-benzopyran-2-one | IMMUNE SYSTEM | 04/10/19 | Structure of full-length human lambda-6A light chain JTO in complex with coumarin 1 | HOMO SAPIENS | null | homo sapiens | homo sapiens | Morgan, G.J., Yan, N.L., Mortenson, D.E., Stanfield, R.L., Wilson, I.A., Kelly, J.W. | 1.8 | X-RAY DIFFRACTION | 0.263 | 0.204 | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
3o2w | H | L | 0 | L | Hapten | O2W | METHYL ({[(3AR,4R,7R,7AR)-2-(4-AMINOPHENYL)-1,3-DIOXOOCTAHYDRO-4H-4,7-ETHANOISOINDOL-4-YL]CARBAMOYL}OXY)ACETATE | IMMUNE SYSTEM | 07/22/10 | Crystal structure of the 1E9 PheL89Ser/LeuH47Trp/MetH100bPhe Fab in complex with a 39A11 transition state analog | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | mus musculus, homo sapiens | Verdino, P., Wilson, I.A. | 2.55 | X-RAY DIFFRACTION | 0.248 | 0.207 | false | true | IGHV9 | IGKV1 | Kappa | null | null | null | null | null |
6ni3 | N | null | 0 | A | B | G | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | SIGNALING PROTEIN/IMMUNE SYSTEM | 12/26/18 | B2V2R-Gs protein subcomplex of a GPCR-G protein-beta-arrestin mega-complex | HOMO SAPIENS; ENTEROBACTERIA PHAGE RB59; LAMA GLAMA | lama glama | null | homo sapiens | homo sapiens | homo sapiens | Nguyen, A.H., Thomsen, A.R.B., Cahill, T.J., des Georges, A., Lefkowitz, R.J. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
7a3t | H | L | 0 | A | protein | null | core protein | VIRAL PROTEIN | 08/18/20 | Crystal structure of dengue 3 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE1 C8 | DENGUE VIRUS 3; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 3 | Sharma, A., Vaney, M.C., Guardado-Calvo, P., Duquerroy, S., Rouvinski, A., Rey, F.A. | 2.65 | X-RAY DIFFRACTION | 0.254 | 0.207 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
4m43 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/06/13 | Crystal structure of anti-rabies glycoprotein Fab 523-11 | MUS MUSCULUS | mus musculus | mus musculus | null | Stanfield, R.L., Wilson, I.A., Wunner, W.H. | 1.85 | X-RAY DIFFRACTION | 0.232 | 0.194 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
1ezv | X | Y | 0 | E | protein | null | ubiquinol-cytochrome c reductase iron-sulfursubunit | OXIDOREDUCTASE/ELECTRON TRANSPORT | 05/12/00 | STRUCTURE OF THE YEAST CYTOCHROME BC1 COMPLEX CO-CRYSTALLIZED WITH AN ANTIBODY FV-FRAGMENT | SACCHAROMYCES CEREVISIAE; MUS MUSCULUS | mus musculus | mus musculus | saccharomyces cerevisiae | Hunte, C., Koepke, J., Lange, C., Rossmanith, T., Michel, H. | 2.3 | X-RAY DIFFRACTION | 0.254 | 0.222 | false | true | IGHV3 | IGKV10 | Kappa | null | null | null | null | null |
7k93 | K | k | 0 | D | protein | null | non-structural protein 1 | VIRAL PROTEIN | 09/28/20 | DENV2 NS1 in complex with neutralizing 2B7 single chain Fab variable region (scFv) | DENGUE VIRUS 2; MUS MUSCULUS | mus musculus | null | dengue virus 2 | Akey, D.L., Smith, J.L. | 2.89 | X-RAY DIFFRACTION | 0.269 | 0.223 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4jre | H | L | 0 | D | protein | null | nitrite extrusion protein 1 | TRANSPORT PROTEIN/Immune System | 03/21/13 | Crystal structure of nitrate/nitrite exchanger NarK with nitrite bound | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Zheng, H., Wisedchaisri, G., Gonen, T. | 2.8 | X-RAY DIFFRACTION | 0.269 | 0.223 | false | false | IGHV9 | IGKV19 | Kappa | null | null | null | null | null |
7cn2 | G | g | 0 | E | protein | null | major capsid protein l1 | IMMUNE SYSTEM/VIRAL PROTEIN | 07/29/20 | Subparticle refinement of human papillomavirus type 16 pesudovirus in complex with H16.001 Fab | HUMAN PAPILLOMAVIRUS TYPE 16; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | human papillomavirus type 16 | He, M.Z., Li, S.W. | 3.43 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7fei | H | L | 0 | 2 | 1 | protein | protein | NA | NA | capsid protein vp0 | capsid protein vp0 | VIRUS | 07/20/21 | Complex of FMDV A/WH/CHA/09 and bovine neutralizing scFv antibody R55 | BOS TAURUS; FOOT-AND-MOUTH DISEASE VIRUS - TYPE A | bos taurus | bos taurus | foot-and-mouth disease virus - type a | foot-and-mouth disease virus - type a | Yong, H., Kun, L., Zhiyong, L. | 3.91 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7l7r | B | A | 0 | G | protein | null | glycoprotein c | VIRAL PROTEIN | 12/30/20 | CCHFV Gc prefusion monomer bound to ADI-36121 and ADI-37801 Fabs | HOMO SAPIENS; CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS (STRAIN NIGERIA/IBAR10200/1970) | homo sapiens | homo sapiens | crimean-congo hemorrhagic fever virus (strainnigeria/ibar10200/1970) | Mishra, A.K., McLellan, J.S. | 2.1 | X-RAY DIFFRACTION | 0.244 | 0.219 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1u8l | B | A | 0 | C | peptide | null | gp41 peptide | IMMUNE SYSTEM | 08/06/04 | Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide DLDRWAS | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Bryson, S., Julien, J.-P., Hynes, R.C., Pai, E.F. | 2.6 | X-RAY DIFFRACTION | 0.249 | 0.223 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
2kqm | null | A | 6 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6w1c | J | N | 0 | G | protein | null | e2 glycoprotein | VIRUS/IMMUNE SYSTEM | 03/04/20 | Human mAbs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the MXR8 receptor binding domain | MAYARO VIRUS (STRAIN BRAZIL); HOMO SAPIENS | homo sapiens | homo sapiens | mayaro virus (strain brazil) | Miller, A.S., Kuhn, R.J. | 5.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
6mph | 1 | 2 | 0 | 6 | protein | null | envelope glycoprotein gp41 | VIRAL PROTEIN | 10/06/18 | Cryo-EM structure at 3.8 A resolution of HIV-1 fusion peptide-directed antibody, DF1W-a.01, elicited by vaccination of Rhesus macaques, in complex with stabilized HIV-1 Env BG505 DS-SOSIP, which was also bound to antibodies VRC03 and PGT122 | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Acharya, P., Xu, K., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
7q9i | E | F | 0 | B | protein | null | surface glycoprotein | Viral Protein/Immune System | 11/12/21 | Beta-43 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 4.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
6i9i | H | L | 0 | D | protein | null | glycoprotein | VIRAL PROTEIN | 11/23/18 | Rift valley fever virus Gn in complex with a neutralizing antibody fragment | ORYCTOLAGUS CUNICULUS; RIFT VALLEY FEVER VIRUS | oryctolagus cuniculus | oryctolagus cuniculus | rift valley fever virus | Allen, E.R., Bowden, T.A. | 1.98 | X-RAY DIFFRACTION | 0.243 | 0.203 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6udk | M | N | 0 | R | protein | null | rc1 variant of hiv-1 env glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 09/19/19 | HIV-1 bNAb 1-55 in complex with modified BG505 SOSIP-based immunogen RC1 and 10-1074 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Abernathy, M.E., Barnes, C.O., Gristick, H.B., Bjorkman, P.J. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
7syz | H | L | 0 | A | protein | null | attachment glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 11/25/21 | Hendra virus G protein head domain in complex with cross-neutralizing murine antibody hAH1.3 | HENDRA HENIPAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | hendra henipavirus | Xu, K., Xu, Y. | 2.86 | X-RAY DIFFRACTION | 0.262 | 0.246 | false | true | IGHV9 | IGKV1 | Kappa | null | null | null | null | null |
7e5s | U | Q | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/20/21 | SARS-CoV-2 S trimer with four-antibody cocktail complex | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, Y., Wang, L., Wang, N., Feng, R., Wang, X. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
2h1p | H | L | 0 | P | peptide | null | pa1 | COMPLEX (ANTIBODY/PEPTIDE) | 11/12/97 | THE THREE-DIMENSIONAL STRUCTURES OF A POLYSACCHARIDE BINDING ANTIBODY TO CRYPTOCOCCUS NEOFORMANS AND ITS COMPLEX WITH A PEPTIDE FROM A PHAGE DISPLAY LIBRARY: IMPLICATIONS FOR THE IDENTIFICATION OF PEPTIDE MIMOTOPES | MUS MUSCULUS | mus musculus | mus musculus | null | Young, A.C.M., Valadon, P., Casadevall, A., Scharff, M.D., Sacchettini, J.C. | 2.4 | X-RAY DIFFRACTION | unknown | 0.186 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
1ifh | H | L | 0 | P | peptide | null | influenza hemagglutinin ha1 (strain x47)(residues 101-107) | IMMUNOGLOBULIN | 05/06/93 | A DETAILED ANALYSIS OF THE FREE AND BOUND CONFORMATION OF AN ANTIBODY: X-RAY STRUCTURES OF ANTI-PEPTIDE FAB 17(SLASH)9 AND THREE DIFFERENT FAB-PEPTIDE COMPLEXES | MUS MUSCULUS | mus musculus | mus musculus | null | Schulze-Gahmen, U., Wilson, I.A. | 2.8 | X-RAY DIFFRACTION | unknown | 0.170 | false | true | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
5nbw | H | L | 0 | L | Hapten | 8SK | benzo[a]pyren-3-ol | IMMUNE SYSTEM | 03/02/17 | Crystal structure of the Fab fragment 22F12 in complex with 3-hydroxybenzo[a]pyrene | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Skerra, A., Eichinger, A. | 2.4 | X-RAY DIFFRACTION | 0.228 | 0.180 | false | true | IGHV1 | IGKV14 | Kappa | null | null | null | null | null |
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