pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2fed | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | PROTON TRANSPORT,MEMBRANE PROTEIN | 12/15/05 | Structure of the E203Q mutant of the Cl-/H+ exchanger CLC-ec1 from E.Coli | ESCHERICHIA COLI; HOMO SAPIENS | homo sapiens | homo sapiens | escherichia coli | Accardi, A., Walden, M.P., Nguitragool, W., Jayaram, H., Williams, C., Miller, C. | 3.317 | X-RAY DIFFRACTION | 0.287 | 0.248 | false | true | IGHV3 | IGKV6D | Kappa | null | null | null | null | null |
7aqx | D | null | 0 | B | protein | null | variant surface glycoprotein mitat 1.2 | MEMBRANE PROTEIN | 10/23/20 | Co-Crystal Structure of Variant Surface Glycoprotein VSG2 in complex with Nanobody VSG2(NB9) | LAMA GLAMA; TRYPANOSOMA BRUCEI BRUCEI | lama glama | null | trypanosoma brucei brucei | Stebbins, C.E., Hempelmann, A. | 1.499 | X-RAY DIFFRACTION | 0.192 | 0.164 | false | true | IGHV1 | null | null | null | null | null | null | null |
6c5k | H | L | 0 | H | carbohydrate | GP1 | polysaccharide | SUGAR BINDING PROTEIN | 01/16/18 | S25-23 Fab in complex with Chlamydiaceae LPS (Crystal form 2) | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Haji-Ghassemi, O., Evans, S.V. | 1.75 | X-RAY DIFFRACTION | 0.218 | 0.188 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
6be3 | H | L | 0 | H | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 10/24/17 | Crystal structure of a polysaccharide-binding human Fab (F598) in complex with N-acetyl-D-glucosamine (GlcNAc) | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Soliman, C., Ramsland, P.A. | 1.6 | X-RAY DIFFRACTION | 0.200 | 0.166 | false | true | IGHV4 | IGLV4 | Lambda | null | null | null | null | null |
6tkb | I | M | 0 | null | null | null | null | IMMUNE SYSTEM | 11/28/19 | ChiLob 7/4 H2 HC-C224S F(ab')2 | HOMO SAPIENS | null | null | null | Orr, C.M., Fisher, H., Tews, I. | 2.0 | X-RAY DIFFRACTION | 0.229 | 0.182 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
7vbi | N | null | 0 | A | B | protein | protein | NA | NA | isoform 3 of guanine nucleotide-binding protein g(s)subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | STRUCTURAL PROTEIN | 08/31/21 | Cryo-EM structure of the non-acylated tirzepatide (LY3298176)-bound human GLP-1R-Gs complex | HOMO SAPIENS; ESCHERICHIA COLI; RATTUS NORVEGICUS; BOS TAURUS; SYNTHETIC CONSTRUCT | null | null | homo sapiens | rattus norvegicus | Zhao, F.H., Zhou, Q.T., Cong, Z.T., Hang, K.N., Zou, X.Y., Zhang, C., Chen, Y., Dai, A.T., Liang, A.Y., Ming, Q.Q., Wang, M., Chen, L.N., Xu, P.Y., Chang, R.L., Feng, W.B., Xia, T., Zhang, Y., Wu, B.L., Yang, D.H., Zhao, L.H., Xu, H.E., Wang, M.W. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
7aqz | D | null | 0 | A | protein | null | variant surface glycoprotein mitat 1.2 | MEMBRANE PROTEIN | 10/23/20 | Co-Crystal Structure of Variant Surface Glycoprotein VSG2 in complex with Nanobody VSG2(NB14) | LAMA GLAMA; TRYPANOSOMA BRUCEI BRUCEI | lama glama | null | trypanosoma brucei brucei | Stebbins, C.E., Hempelmann, A., VanStraaten, M. | 1.3 | X-RAY DIFFRACTION | 0.172 | 0.151 | false | true | IGHV1 | null | null | null | null | null | null | null |
3mnv | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 04/22/10 | Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment | MUS MUSCULUS,HOMO SAPIENS | mus musculus,homo sapiens | mus musculus,homo sapiens | null | Nicely, N.I., Dennison, S.M., Kelsoe, G., Liao, H.-X., Alam, S.M., Haynes, B.F. | 2.4 | X-RAY DIFFRACTION | 0.228 | 0.181 | false | true | IGHV9 | IGKV8 | Kappa | null | null | null | null | null |
7oaq | A | null | 0 | E | protein | null | unknown | ANTIVIRAL PROTEIN | 04/20/21 | Nanobody H3 AND C1 bound to RBD with Kent mutation | LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | null | null | null | Naismith, J.H., Mikolajek, H. | 1.55 | X-RAY DIFFRACTION | 0.178 | 0.155 | false | false | IGHV1 | null | null | null | null | null | null | null |
4wfe | G | F | 0 | B | protein | null | potassium channel subfamily k member 4 | METAL TRANSPORT | 09/15/14 | Human TRAAK K+ channel in a K+ bound conductive conformation | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Brohawn, S.G., MacKinnon, R. | 2.5 | X-RAY DIFFRACTION | 0.234 | 0.199 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6vi4 | C | null | 0 | B | protein | null | kappa opioid receptor | MEMBRANE PROTEIN | 01/11/20 | Nanobody-Enabled Monitoring of Kappa Opioid Receptor States | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Che, T., Roth, B.L. | 3.3 | X-RAY DIFFRACTION | 0.271 | 0.242 | false | true | IGHV1 | null | null | null | null | null | null | null |
6yye | C | c | 0 | A | protein | null | triggering receptor expressed on myeloid cells 2 | IMMUNE SYSTEM | 05/04/20 | TREM2 extracellular domain (19-131) in complex with single-chain variable fragment (scFv-2) | HOMO SAPIENS | homo sapiens | null | homo sapiens | Szykowska, A., Preger, C., Krojer, T., Mukhopadhyay, S.M.M., McKinley, G., Graslund, S., Wigren, E., Persson, H., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Di Daniel, E., Burgess-Brown, N., Bullock, A. | 3.36 | X-RAY DIFFRACTION | 0.327 | 0.299 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6iyn | A | null | 10 | null | null | null | null | AFLATOXIN B1-BINDING PROTEIN | 12/17/18 | Solution structure of camelid nanobody Nb26 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., He, T., Zhu, J., Li, S.L., Hu, R., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
5f7l | B | null | 0 | A | protein | null | adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/08/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with Nanobody Nb-ER14 | HELICOBACTER PYLORI; LAMA GLAMA | lama glama | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.74 | X-RAY DIFFRACTION | 0.265 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ejz | H | L | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/03/21 | Complex Structure of antibody BD-503 and RBD-S477N of COVID-19 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Xu, H., Wang, B., Zhao, T.N., Su, X.D. | 3.63 | X-RAY DIFFRACTION | 0.284 | 0.241 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6ldy | H | L | 0 | M | peptide | null | methylated peptide | IMMUNE SYSTEM | 11/23/19 | Structure antibody D6 in complex with methylated peptide | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Caaveiro, J.M.M., Tsumoto, K. | 1.77 | X-RAY DIFFRACTION | 0.218 | 0.185 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6zdh | D | F | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/14/20 | SARS-CoV-2 Spike glycoprotein in complex with a neutralizing antibody EY6A Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Zhou, D., Zhao, Y., Fry, E.E., Ren, J., Stuart, D.I. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6ks2 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 08/23/19 | Structure of anti-Ghrelin receptor antibody | MUS MUSCULUS | mus musculus | mus musculus | null | Shiimura, Y., Horita, S., Asada, H., Hirata, K., Iwata, S., Kojima, M. | 1.753 | X-RAY DIFFRACTION | 0.233 | 0.192 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
6p3s | S | T | 0 | U | protein | null | hemagglutinin | IMMUNE SYSTEM/VIRAL PROTEIN | 05/27/20 | Crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain | HOMO SAPIENS; INFLUENZA A VIRUS (A/CHICKEN/VIETNAM/32/2004(H5N1)) | homo sapiens | homo sapiens | influenza a virus(a/chicken/vietnam/32/2004(h5n1)) | Dong, J., Crowe, J.E. | 4.0 | X-RAY DIFFRACTION | 0.326 | 0.281 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1m71 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 07/18/02 | Crystal structure of a Monoclonal Fab Specific for Shigella Flexneri Y lipopolysaccharide | MUS MUSCULUS | mus musculus | mus musculus | null | Vyas, N.K., Vyas, M.N., Chervenak, M.C., Johnson, M.A., Pinto, B.M., Bundle, D.R., Quiocho, F.A. | 2.8 | X-RAY DIFFRACTION | 0.291 | 0.223 | false | true | IGHV6 | IGKV1 | Kappa | null | null | null | null | null |
7pij | K | null | 0 | null | null | null | null | MEMBRANE PROTEIN | 08/20/21 | Structure of Staphylococcus capitis divalent metal ion transporter (DMT) by NabFab-fiducial assisted cryo-EM | SYNTHETIC CONSTRUCT; STAPHYLOCOCCUS CAPITIS; LAMA GLAMA | lama glama | null | null | Bloch, J.S., Mukherjee, S., Kowal, J., Kossiakoff, A.A., Locher, K.P. | 3.47 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4nhh | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/05/13 | Structure of 2G12 IgG Dimer | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wu, Y., West Jr., A.P., Kim, H.J., Thornton, M.E., Ward, A.B., Bjorkman, P.J. | 6.5 | X-RAY DIFFRACTION | 0.366 | 0.381 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
1fvc | D | C | 0 | null | null | null | null | IMMUNOGLOBULIN | 10/20/92 | X-RAY STRUCTURES OF THE ANTIGEN-BINDING DOMAINS FROM THREE VARIANTS OF HUMANIZED ANTI-P185-HER2 ANTIBODY 4D5 AND COMPARISON WITH MOLECULAR MODELING | HOMO SAPIENS | homo sapiens | homo sapiens | null | Eigenbrot, C., Randal, M., Kossiakoff, A.A., Presta, L. | 2.2 | X-RAY DIFFRACTION | unknown | 0.183 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6lxj | M | N | 0 | D | protein | null | neuraminidase | HYDROLASE/IMMUNE SYSTEM | 02/11/20 | Crystal structure of human Z2B3 Fab in complex with influenza virus neuraminidase from A/Anhui/1/2013 (H7N9) | INFLUENZA A VIRUS (A/ANHUI/1-BALF_RG44/2013(H7N9)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/anhui/1-balf_rg44/2013(h7n9)) | Jiang, H., Peng, W., Qi, J., Chai, Y., Song, H., Shi, Y., Gao, G.F., Wu, Y. | 2.903 | X-RAY DIFFRACTION | 0.241 | 0.193 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
6bli | D | E | 0 | F | peptide | null | major surface glycoprotein g | VIRAL PROTEIN/IMMUNE SYSTEM | 11/10/17 | RSV G peptide bound to Fab CB002.5 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human respiratory syncytial virus a (strainrsb6256) | Jones, H.G., McLellan, J.S., Langedijk, J.P. | 2.12 | X-RAY DIFFRACTION | 0.218 | 0.169 | false | true | IGHV4 | IGKV1 | Kappa | 0 | -12.665638 | Unknown | null | TBD |
7dpm | A | B | 0 | C | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 12/20/20 | Crystal structure of SARS-CoV-2 Spike RBD in complex with MW06 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, J., Jiao, S., Wang, R., Zhang, J., Zhang, M., Wang, M. | 3.304 | X-RAY DIFFRACTION | 0.263 | 0.217 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6frj | H | h | 0 | B | peptide | null | apd-sethr-rp | IMMUNE SYSTEM | 02/16/18 | Crystal structure of scFv-SM3 in complex with APD-SeThrGalNAc-RP | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | synthetic construct | Companon, I., Castro-Lopez, J., Escudero-Casao, M., Avenoza, A., Busto, J.H., Castillon, S., Jimenez-Barbero, J., Bernardes, G.J., Boutureira, O., Jimenez-Oses, G., Asensio, J.L., Peregrina, J.M., Hurtado-Guerrero, R., Corzana, F. | 1.4 | X-RAY DIFFRACTION | 0.230 | 0.205 | true | true | unknown | unknown | unknown | null | null | null | null | null |
2kh2 | B | b | 69 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6lun | C | D | 0 | null | null | null | null | STRUCTURAL PROTEIN | 01/30/20 | NN2101 Antibody Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kim, H.N., Seo, M.D., Park, S.K. | 1.9 | X-RAY DIFFRACTION | 0.210 | 0.165 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
4jhw | H | L | 0 | F | protein | null | fusion glycoprotein f0 | IMMUNE SYSTEM | 03/05/13 | Crystal Structure of Respiratory Syncytial Virus Fusion Glycoprotein Stabilized in the Prefusion Conformation by Human Antibody D25 | HOMO SAPIENS; HUMAN RESPIRATORY SYNCYTIAL VIRUS | homo sapiens | homo sapiens | human respiratory syncytial virus | Mclellan, J.S., Chen, M., Leung, S., Graepel, K.W., Du, X., Yang, Y., Zhou, T., Baxa, U., Yasuda, E., Beaumont, T., Kumar, A., Modjarrad, K., Zheng, Z., Zhao, M., Xia, N., Kwong, P.D., Graham, B.S. | 3.6 | X-RAY DIFFRACTION | 0.267 | 0.213 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3ks0 | H | L | 0 | B | protein | null | cytochrome b2, mitochondrial | OXIDOREDUCTASE | 11/20/09 | Crystal structure of the heme domain of flavocytochrome b2 in complex with Fab B2B4 | SACCHAROMYCES CEREVISIAE; MUS MUSCULUS | mus musculus | mus musculus | saccharomyces cerevisiae | Golinelli-Pimpaneau, B., Lederer, F., Le, K.H.D. | 2.7 | X-RAY DIFFRACTION | 0.289 | 0.214 | false | false | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
5uk1 | I | i | 0 | E | protein | null | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/19/17 | CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 3 | HOMO SAPIENS; INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1)); INFLUENZA A VIRUS | homo sapiens | null | influenza a virus (a/solomonislands/3/2006(h1n1)) | Liu, Y., Pan, J., Caradonna, T., Jenni, S., Raymond, D.D., Schmidt, A.G., Harrison, S.C., Grigorieff, N. | 4.8 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7dce | H | L | 0 | B | X | protein | protein | NA | NA | isoform 2 of basigin | xk-related protein 8 | TRANSPORT PROTEIN | 10/26/20 | Cryo-EM structure of human XKR8-basigin complex bound to Fab fragment | HOMO SAPIENS; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | homo sapiens | Sakuragi, T., Kanai, R., Tsutsumi, A., Narita, H., Onishi, E., Miyazaki, T., Baba, T., Nakagawa, A., Kikkawa, M., Toyoshima, C., Nagata, S. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6tnp | D | C | 0 | D | unknown | NO8 | unknown | IMMUNE SYSTEM | 12/09/19 | Crystal structure of the ScFv-5E5 in complex with a Tn glycopeptide | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Macias-Leon, J., Corzana, F., Hurtado-Guerrero, R. | 3.0 | X-RAY DIFFRACTION | 0.251 | 0.203 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
6wty | K | L | 0 | J | protein | null | reticulocyte binding protein 2b | CELL INVASION | 05/04/20 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 253245 | PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium vivax (strain salvador i) | Chan, L.J., Dietrich, M.H., Tham, W.H. | 3.481 | X-RAY DIFFRACTION | 0.301 | 0.262 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
5w23 | H | L | 0 | C | protein | null | fusion glycoprotein f0 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/05/17 | Crystal Structure of RSV F in complex with 5C4 Fab | HUMAN RESPIRATORY SYNCYTIAL VIRUS A; MUS MUSCULUS | mus musculus | mus musculus | human respiratory syncytial virus a | Battles, M.B., McLellan, J.S. | 3.4 | X-RAY DIFFRACTION | 0.239 | 0.198 | false | true | IGHV14 | IGKV3 | Kappa | null | null | null | null | null |
6rcu | E | D | 0 | A | protein | null | reticulocyte binding protein homologue 5 | CELL ADHESION | 04/11/19 | PfRH5 bound to monoclonal antibodies R5.004 and R5.016 | PLASMODIUM FALCIPARUM (ISOLATE 3D7); HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium falciparum (isolate 3d7) | Alanine, D.W.G., Draper, S.J., Higgins, M.K. | 4.005 | X-RAY DIFFRACTION | 0.339 | 0.285 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6x96 | J | K | 0 | G | protein | null | bg505 hiv-1 env gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/02/20 | Cryo-EM model of HIV-1 Env BG505 SOSIP.664 in complex with rabbit monoclonal antibody 10A fragment antigen binding variable domain | HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | Ozorowski, G., Cottrell, C.A., Ward, A.B. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1f11 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 05/18/00 | F124 FAB FRAGMENT FROM A MONOCLONAL ANTI-PRES2 ANTIBODY | MUS MUSCULUS | mus musculus | mus musculus | null | Saul, F.A., Vulliez-Le Normand, B., Passafiume, M., Riottot, M.M., Bentley, G.A. | 3.0 | X-RAY DIFFRACTION | 0.271 | 0.184 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4yqx | H | L | 0 | A | protein | null | interleukin-2 | CYTOKINE/IMMUNE SYSTEM | 03/13/15 | Mouse IL-2 Bound to JES6-1 scFv Fragment | RATTUS NORVEGICUS; MUS MUSCULUS | rattus norvegicus | rattus norvegicus | mus musculus | Spangler, J.B., Luca, V.C., Jude, K.M., Garcia, K.C. | 2.826 | X-RAY DIFFRACTION | 0.204 | 0.170 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
5fb8 | B | A | 0 | C | protein | null | pro-interleukin-16 | IMMUNE SYSTEM | 12/14/15 | Structure of Interleukin-16 bound to the 14.1 antibody | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Hall, G., Cowan, R., Bayliss, R., Carr, M. | 2.07 | X-RAY DIFFRACTION | 0.205 | 0.172 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6k2i | A | null | 3 | null | null | null | null | AFB1-BINDING PROTEIN | 05/14/19 | Solution structure of camelid nanobody Nb11 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., Li, S.L., He, T., Zhu, J., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7cfm | N | null | 0 | A | B | G | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | MEMBRANE PROTEIN | 06/27/20 | Cryo-EM structure of the P395-bound GPBAR-Gs complex | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | homo sapiens | homo sapiens | Yang, F., Mao, C., Guo, L., Lin, J., Ming, Q., Xiao, P., Wu, X., Shen, Q., Guo, S., Shen, D., Lu, R., Zhang, L., Huang, S., Ping, Y., Zhang, C., Ma, C., Zhang, K., Liang, X., Shen, Y., Nan, F., Yi, F., Luca, V., Zhou, J., Jiang, C., Sun, J., Xie, X., Yu, X., Zhang, Y. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
6svl | O | P | 0 | R | protein | null | myeloid-derived growth factor | CYTOKINE | 09/18/19 | human Myeloid-derived growth factor (MYDGF) in complex with neutralizing Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ebenhoch, R., Nar, H. | 1.58 | X-RAY DIFFRACTION | 0.206 | 0.181 | false | true | IGHV14 | IGKV12 | Kappa | null | null | null | null | null |
1ap2 | D | C | 0 | null | null | null | null | IMMUNOGLOBULIN | 07/23/97 | SINGLE CHAIN FV OF C219 | MUS MUSCULUS | mus musculus | mus musculus | null | Hoedemaeker, P.J., Rose, D.R. | 2.36 | X-RAY DIFFRACTION | 0.284 | 0.204 | true | true | IGHV14 | IGKV8 | Kappa | null | null | null | null | null |
3hc3 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/05/09 | BHA10 IgG1 Fab double mutant variant - antibody directed at human LTBR | HOMO SAPIENS | homo sapiens | homo sapiens | null | Arndt, J.W., Jordan, J.L., Lugovskoy, A., Wang, D. | 1.72 | X-RAY DIFFRACTION | 0.190 | 0.158 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6n1w | M | N | 0 | c | protein | null | unknown | VIRAL PROTEIN | 11/12/18 | Cryo-EM structure at 4.2 A resolution of vaccine-elicited antibody DFPH-a.15 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Kwong, P.D. | 4.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
5i2i | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/08/16 | Structure of cetuximab Fab with cyclic F3Q variant of the meditope | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.551 | X-RAY DIFFRACTION | 0.205 | 0.160 | false | true | IGHV2 | IGKV5 | Kappa | null | null | null | null | null |
5y9j | H | L | 0 | A | protein | null | tumor necrosis factor ligand superfamily member 13b | PROTEIN BINDING | 08/25/17 | BAFF in complex with belimumab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Heo, Y.-S., Shin, W. | 2.05 | X-RAY DIFFRACTION | 0.217 | 0.180 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
6wzk | A | B | 0 | E | protein | null | c-x-c motif chemokine 3 | IMMUNE SYSTEM | 05/14/20 | LY3041658 Fab bound to CXCL3 | HOMO SAPIENS; MACACA FASCICULARIS | homo sapiens | homo sapiens | macaca fascicularis | Durbin, J.D., Druzina, Z. | 1.8 | X-RAY DIFFRACTION | 0.209 | 0.178 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4eow | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/16/12 | Crystal structure of a disease-associated anti-human GM-CSF autoantibody MB007 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Blech, M. | 1.97 | X-RAY DIFFRACTION | 0.257 | 0.224 | false | false | IGHV7 | IGLV1 | Lambda | null | null | null | null | null |
6a77 | H | L | 0 | A | protein | null | roundabout homolog 1 | IMMUNE SYSTEM | 07/02/18 | Crystal structure of the fifth immunoglobulin domain (Ig5) of human Robo1 in complex with the Fab fragment of murine monoclonal antibody B5209B | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Mizohata, E., Nakayama, T., Kado, Y., Inoue, T. | 2.0 | X-RAY DIFFRACTION | 0.278 | 0.238 | false | true | IGHV5 | IGKV12 | Kappa | null | null | null | null | null |
7ter | H | L | 0 | B | A | protein | protein | NA | NA | glutamate receptor ionotropic, nmda 2b | glutamate receptor ionotropic, nmda 1 | SIGNALING PROTEIN/IMMUNE SYSTEM | 01/05/22 | Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 non-active2 conformation | RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | rattus norvegicus | Tajima, N., Furukawa, H. | 5.23 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
2x1p | B | null | 0 | null | null | null | null | CONTRACTILE PROTEIN | 01/03/10 | Gelsolin Nanobody | LAMA GLAMA | lama glama | null | null | VandenAbbeele, A., DeClercq, S., DeGanck, A., DeCorte, V., VanLoo, B., Srinivasan, V., Steyaert, J., Vandekerckhove, J., Gettemans, J. | 1.1 | X-RAY DIFFRACTION | 0.220 | 0.203 | false | true | IGHV1 | null | null | null | null | null | null | null |
2htl | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | MEMBRANE PROTEIN | 07/26/06 | Structure of the Escherichia coli ClC chloride channel Y445F mutant and Fab complex | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Accardi, A., Lobet, S., Williams, C., Miller, C., Dutzler, R. | 3.4 | X-RAY DIFFRACTION | 0.302 | 0.259 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6ev1 | I | J | 0 | null | null | null | null | IMMUNE SYSTEM | 11/01/17 | Crystal structure of antibody against schizophyllan | MUS MUSCULUS | mus musculus | mus musculus | null | Sung, K.H., Josewski, J., Dubel, S., Blankenfeldt, W., Rau, U. | 3.043 | X-RAY DIFFRACTION | 0.238 | 0.186 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6vvu | J | K | 0 | B | protein | null | tryptase alpha/beta-1 | HYDROLASE/IMMUNE SYSTEM | 02/18/20 | Anti-Tryptase fab E104.v1 bound to tryptase | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ultsch, M., Koerber, J.T. | 3.0 | X-RAY DIFFRACTION | 0.232 | 0.187 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
4mwf | A | B | 0 | D | protein | null | envelope glycoprotein e2 | IMMUNE SYSTEM | 09/24/13 | Structure of Hepatitis C Virus Envelope Glycoprotein E2 core bound to broadly neutralizing antibody AR3C | HOMO SAPIENS; HEPATITIS C VIRUS (ISOLATE H) | homo sapiens | homo sapiens | hepatitis c virus (isolate h) | Kong, L., Wilson, I.A., Law, M. | 2.645 | X-RAY DIFFRACTION | 0.270 | 0.231 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3d69 | H | L | 0 | null | null | null | null | Immune System | 05/19/08 | Crystal Structure of the Fab Fragment of an Anti-Factor IX Antibody 10C12 | HOMO SAPIENS | mus musculus | mus musculus | null | Shi, X.L., Huang, M.D., Zeng, T. | 3.77 | X-RAY DIFFRACTION | 0.342 | 0.249 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7ley | D | E | 0 | A | protein | null | arginase-1 | HYDROLASE/IMMUNE SYSTEM | 01/15/21 | Trimeric human Arginase 1 in complex with mAb5 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Gomez-Llorente, Y., Scapin, G., Palte, R.L. | 3.05 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5bjz | D | H | 0 | B | protein | null | maltose-binding periplasmic protein | SUGAR BINDING PROTEIN | 09/12/17 | Crystal structure of maltose binding protein in complex with an allosteric synthetic antibody | ESCHERICHIA COLI O157:H7; HOMO SAPIENS | homo sapiens | homo sapiens | escherichia coli o157 | Mukherjee, S., Kossiakoff, A.A. | 1.95 | X-RAY DIFFRACTION | 0.229 | 0.194 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2gk0 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/31/06 | Structure of Catalytic Elimination Antibody 13G5 from a twinned crystal in space group C2 | MUS MUSCULUS | mus musculus | mus musculus | null | Debler, E.W., Wilson, I.A. | 2.45 | X-RAY DIFFRACTION | unknown | unknown | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
7si2 | G | F | 0 | C | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/12/21 | Crystal structure of neutralizing antibody 10-28 in complex with SARS-CoV-2 spike receptor binding domain (RBD) | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Reddem, E.R., Shapiro, L. | 3.2 | X-RAY DIFFRACTION | 0.261 | 0.198 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2ipt | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 10/12/06 | PFA1 Fab Fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Gardberg, A.S., Dealwis, C. | 2.0 | X-RAY DIFFRACTION | 0.223 | 0.177 | false | false | IGHV8 | IGKV1 | Kappa | null | null | null | null | null |
2fat | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/07/05 | An anti-urokinase plasminogen activator receptor (UPAR) antibody: Crystal structure and binding epitope | MUS MUSCULUS | mus musculus | mus musculus | null | Li, Y., Parry, G., Shi, X., Chen, L., Callahan, J.A., Mazar, A.P., Huang, M. | 1.77 | X-RAY DIFFRACTION | 0.273 | 0.239 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6ywc | A | B | 0 | C | protein | null | de novo design 4e1h_95 | DE NOVO PROTEIN | 04/29/20 | De novo designed protein 4E1H_95 in complex with 101F antibody | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Yang, C., Sesterhenn, F., Pojer, F., Correia, B.E. | 2.85 | X-RAY DIFFRACTION | 0.248 | 0.212 | false | true | IGHV8 | IGKV3 | Kappa | null | null | null | null | null |
5dmi | H | L | 0 | A | protein | null | tumor necrosis factor receptor superfamily member 5 | IMMUNE SYSTEM/SIGNALING PROTEIN | 09/08/15 | Structure of the extracellular domain of the CD40 in complex with CHI220 FAB | MUS MUSCULUS, HOMO SAPIENS; HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Sheriff, S. | 3.69 | X-RAY DIFFRACTION | 0.207 | 0.168 | false | true | IGHV9 | IGKV5 | Kappa | 0 | -12.334074 | SPR | null | TBD |
7t5f | F | null | 0 | D | protein | null | botulinum neurotoxin type b | TOXIN | 12/12/21 | Botulinum neurotoxin Type B Light Chain complexed with nanobodies JLJ-G3 and JNE-B10 | CLOSTRIDIUM BOTULINUM; CAMELIDAE | camelidae | null | clostridium botulinum | Jin, R., Lam, K.-H. | 2.6 | X-RAY DIFFRACTION | 0.222 | 0.194 | false | true | IGHV1 | null | null | null | null | null | null | null |
7r8b | C | D | 0 | B | A | protein | protein | NA | NA | atp-binding cassette sub-family g member 8 | atp-binding cassette sub-family g member 5 | LIPID TRANSPORT | 06/26/21 | The structure of human ABCG5/ABCG8 supplemented with cholesterol | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | Sun, Y., Li, X., Long, T. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV7 | IGKV9 | Kappa | null | null | null | null | null |
6xlq | E | F | 0 | D | protein | null | butyrophilin subfamily 3 member a1 | IMMUNE SYSTEM | 06/29/20 | Crystal Structure of the Human BTN3A1 Ectodomain in Complex with the CTX-2026 Fab | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Payne, K.K., Mine, J.A., Biswas, S., Chaurio, R.A., Perales-Puchalt, A., Anadon, C.M., Costich, T.L., Harro, C.M., Walrath, J., Ming, Q., Tcyganov, E., Buras, A.L., Rigolizzo, K.E., Mandal, G., Lajoie, J., Ophir, M., Tchou, J., Marchion, D., Luca, V.C., Bobrowicz, P., McLaughlin, B., Eskiocak, U., Schmidt, M., Cubillos... | 3.0 | X-RAY DIFFRACTION | 0.296 | 0.246 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4yga | B | null | 0 | A | protein | null | calmodulin-domain protein kinase 1 | METAL BINDING PROTEIN | 02/26/15 | CDPK1, from Toxoplasma gondii, bound to inhibitory VHH-1B7 | VICUGNA PACOS; TOXOPLASMA GONDII | vicugna pacos | null | toxoplasma gondii | Knockenhauer, K.E., Schwartz, T.U. | 2.94 | X-RAY DIFFRACTION | 0.262 | 0.226 | false | true | IGHV1 | null | null | null | null | null | null | null |
6cm3 | O | N | 0 | E | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN | 03/02/18 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wang, H., Bjorkman, P.J. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7pi3 | T | U | 0 | O | protein | null | cysteine-rich protective antigen | IMMUNE SYSTEM | 08/19/21 | PfCyRPA bound to Fab fragments from monoclonal antibodies Cy.003, Cy.004 and Cy.007 | PLASMODIUM FALCIPARUM 3D7; GALLUS GALLUS | gallus gallus | gallus gallus | plasmodium falciparum 3d7 | Ragotte, R.J., Higgins, M.K. | 3.269 | X-RAY DIFFRACTION | 0.298 | 0.285 | false | true | unknown | unknown | unknown | null | null | null | null | null |
4evn | M | N | 0 | null | null | null | null | immune system | 04/26/12 | Crystal Structure of Fab CR6261 (somatic heavy chain with germline-reverted light chain) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Whittle, J.R.R. | 2.851 | X-RAY DIFFRACTION | 0.293 | 0.230 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5u0u | G | g | 0 | null | null | null | null | IMMUNE SYSTEM | 11/27/16 | Crystal Structure of DH270.1 (unliganded, single-chain Fv) from the DH270 Broadly Neutralizing N332-glycan Dependent Lineage | HOMO SAPIENS | homo sapiens | null | null | Fera, D., Harrison, S.C. | 3.428 | X-RAY DIFFRACTION | 0.282 | 0.254 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7k8s | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/27/20 | Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, C002 (state 1) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Malyutin, A.G., Bjorkman, P.J. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6vi0 | E | D | 0 | C | protein | null | bg505 gp120 | IMMUNE SYSTEM | 01/10/20 | Cryo-EM structure of VRC01.23 in complex with HIV-1 Env BG505 DS.SOSIP | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.43 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
7cws | E | D | 0 | Q | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/31/20 | SARS-CoV-2 Spike Proteins Trimer in Complex with FC05 and H014 Fabs Cocktail | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, L., Wang, X. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
4m8q | A | B | 0 | S | protein | null | 4e10 epitope scaffold t117 | IMMUNE SYSTEM | 08/13/13 | Ontogeny of recognition specificity and functionality for the anti-HIV neutralizing antibody 4E10 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Finton, K.A.K. | 2.89 | X-RAY DIFFRACTION | 0.302 | 0.261 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -11.462795 | SPR | null | TBD |
6x3z | J | I | 0 | B | protein | null | gamma-aminobutyric acid receptor subunit alpha-1 | MEMBRANE PROTEIN | 05/21/20 | Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Kim, J.J., Gharpure, A., Teng, J., Zhuang, Y., Howard, R.J., Zhu, S., Noviello, C.M., Walsh, R.M., Lindahl, E., Hibbs, R.E. | 3.23 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
7wu3 | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 02/05/22 | Cryo-EM structure of the adhesion GPCR ADGRF1 in complex with miniGs | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | homo sapiens | Qu, X., Qiu, N., Wang, M., Zhao, Q., Wu, B. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
6xkq | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/26/20 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CV07-250 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Liu, H., Zhu, X., Wu, N.C., Wilson, I.A. | 2.55 | X-RAY DIFFRACTION | 0.255 | 0.204 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
7rth | J | I | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/21 | Crystal structure of an anti-lysozyme nanobody in complex with an anti-nanobody Fab ""NabFab"" | HOMO SAPIENS | homo sapiens | homo sapiens | null | Filippova, E.V., Mukherjee, S., Bloch, J.S., Locher, K.P., Kossiakoff, A.A. | 3.19 | X-RAY DIFFRACTION | 0.267 | 0.216 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5ggv | H | L | 0 | Y | protein | null | cytotoxic t-lymphocyte protein 4 | IMMUNE SYSTEM | 06/16/16 | CTLA-4 in complex with tremelimumab Fab | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Heo, Y.S. | 1.998 | X-RAY DIFFRACTION | 0.214 | 0.181 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6mqm | D | E | 0 | F | peptide | null | hiv env fusion peptide residue 512-519 | IMMUNE SYSTEM | 10/10/18 | Vaccine-elicited NHP FP-targeting neutralizing antibody DF1W-a.01 in complex with HIV fusion peptide (residue 512-519) | PLATYRRHINI; SYNTHETIC CONSTRUCT | platyrrhini | platyrrhini | human immunodeficiency virus 1 | Xu, K., Wang, Y., Kwong, P.D. | 3.484 | X-RAY DIFFRACTION | 0.246 | 0.200 | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
2vh5 | H | L | 0 | R | protein | null | gtpase hras | IMMUNE SYSTEM | 11/19/07 | CRYSTAL STRUCTURE OF HRAS(G12V) - ANTI-RAS FV (disulfide free mutant) COMPLEX | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Tanaka, T., Williams, R.L., Rabbitts, T.H. | 2.7 | X-RAY DIFFRACTION | 0.291 | 0.211 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7ams | H | L | 0 | B | protein | null | human a6 t-cell receptor beta chain trbc2 | IMMUNE SYSTEM | 10/09/20 | Crystal structure of the complex of the KFN mutant of HuJovi-1 Fab with human TRBC2 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ferrari, M., Bulek, A., Bughda, R., Jha, R., Welin, M., Svensson, A., Logan, D.T., Sewell, A., Onuoha, S., Pule, M. | 2.419 | X-RAY DIFFRACTION | 0.225 | 0.180 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5xez | H | L | 0 | B | protein | null | glucagon receptor,endolysin,glucagon receptor | SIGNALING PROTEIN | 04/06/17 | Structure of the Full-length glucagon class B G protein-coupled receptor | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens, enterobacteria phage t4 | Zhang, H., Qiao, A., Yang, D., Yang, L., Dai, A., de Graaf, C., Reedtz-Runge, S., Dharmarajan, V., Zhang, H., Han, G.Y., Grant, T., Sierra, R., Weierstall, U., Nelson, G., Liu, W., Wu, Y., Ma, L., Cai, X., Lin, G., Wu, X., Geng, Z., Dong, Y., Song, G., Griffin, P., Lau, J., Cherezov, V., Yang, H., Hanson, M., Stevens, ... | 3.0 | X-RAY DIFFRACTION | 0.243 | 0.210 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7wpd | Z | null | 0 | null | null | null | null | VIRAL PROTEIN | 01/23/22 | SARS-CoV-2 Omicron Variant S Trimer complexed with one JMB2002 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS; LAMA GLAMA | lama glama | null | null | Yin, W., Xu, Y., Xu, P., Cao, X., Wu, C., Gu, C., He, X., Wang, X., Huang, S., Yuan, Q., Wu, K., Hu, W., Huang, Z., Liu, J., Wang, Z., Jia, F., Xia, K., Liu, P., Wang, X., Song, B., Zheng, J., Jiang, H., Cheng, X., Jiang, Y., Deng, S.J., Xu, H.E. | 3.18 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6qtl | B | null | 0 | H | Hapten | CFF | CAFFEINE | BIOSYNTHETIC PROTEIN | 04/10/19 | Caffeine recognizing nanobody | CAMELIDAE | camelidae | null | camelidae | Lesne, J., Guichou, J.F., Labesse, G., Cohen-Gonsaud, M. | 2.25 | X-RAY DIFFRACTION | 0.259 | 0.194 | false | true | IGHV1 | null | null | null | null | null | null | null |
4kxz | N | M | 0 | E | protein | null | transforming growth factor beta-2 | immune system | 05/28/13 | crystal structure of tgfb2 in complex with GC2008. | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Mathieu, M., Moulin, A.G., Wei, R. | 2.83 | X-RAY DIFFRACTION | 0.222 | 0.183 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -11.627287 | SPR | null | TBD |
6p95 | D | E | 0 | a | A | protein | protein | NA | NA | unknown | pre-glycoprotein polyprotein gp complex | viral protein/immune system | 06/09/19 | Structure of Lassa virus glycoprotein in complex with Fab 25.6A | LASSA VIRUS; HOMO SAPIENS; LASSA VIRUS (STRAIN MOUSE/SIERRA LEONE/JOSIAH/1976) | homo sapiens | homo sapiens | lassa virus (strain mouse/sierraleone/josiah/1976) | lassa virus | Saphire, E.O., Hastie, K.M. | 3.5 | X-RAY DIFFRACTION | 0.247 | 0.205 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
7la4 | H | L | 0 | A | protein | null | integrin alpha-iib | CELL ADHESION | 01/05/21 | Integrin AlphaIIbBeta3-PT25-2 Complex | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Bush, M.W., Walz, T., Coller, B., Filizola, M., Spasic, A., Nesic, D., Li, J. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
7chz | H | L | 0 | I | protein | null | interleukin-1 beta | IMMUNOSUPPRESSANT | 07/06/20 | Crystal Structure Of Human Il-1beta In Complex With Antibody Binding Fragment Of IgG26A | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Lee, C.C., Wang, A.H.J., Kuo, W.C. | 2.5 | X-RAY DIFFRACTION | 0.260 | 0.193 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6n1w | Q | R | 0 | c | protein | null | unknown | VIRAL PROTEIN | 11/12/18 | Cryo-EM structure at 4.2 A resolution of vaccine-elicited antibody DFPH-a.15 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Kwong, P.D. | 4.2 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
7zfe | X | null | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN | 04/01/22 | SARS-CoV-2 Omicron RBD in complex with Omi-32 Fab and nanobody C1 | LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | lama glama | null | severe acute respiratory syndrome coronavirus2 | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 3.25 | X-RAY DIFFRACTION | 0.293 | 0.237 | false | true | IGHV1 | null | null | null | null | null | null | null |
1d5b | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 10/06/99 | UNLIGANDED MATURE OXY-COPE CATALYTIC ANTIBODY | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Mundorff, E.C., Hanson, M.A., Schultz, P.G., Stevens, R.C. | 2.8 | X-RAY DIFFRACTION | 0.285 | 0.232 | false | true | IGHV1 | IGKV14 | Kappa | null | null | null | null | null |
7ws0 | G | F | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/28/22 | Structures of Omicron Spike complexes illuminate broad-spectrum neutralizing antibody development | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Guo, H., Gao, Y., Ji, X., Yang, H. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6h06 | E | F | 0 | J | peptide | null | microtubule-associated protein tau | IMMUNE SYSTEM | 07/06/18 | FAB CBTAU-22.1 IN COMPLEX WITH TAU PEPTIDE V1088-5 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Juraszek, J., Steinbacher, S. | 2.63 | X-RAY DIFFRACTION | 0.270 | 0.216 | false | true | IGHV1 | IGKV2 | Kappa | 0.000006 | -7.164753 | Unknown | null | TBD |
4cad | K | J | 0 | L | protein | null | ras and a-factor converting enzyme 1, rce1 | PROTEIN BINDING | 10/08/13 | Mechanism of farnesylated CAAX protein processing by the integral membrane protease Rce1 | METHANOCOCCUS MARIPALUDIS; MUS MUSCULUS | mus musculus | mus musculus | methanococcus maripaludis | Kulkarni, K., Manolaridis, I., Dodd, R.B., Cronin, N., Ogasawara, S., Iwata, S., Barford, D. | 2.5 | X-RAY DIFFRACTION | 0.2669 | 0.2262 | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
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