pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1mcl | null | A | 0 | P | peptide | null | n-acetyl-d-his-l-pro-oh | IMMUNOGLOBULIN | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | null | null | null | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
2orb | I | M | 0 | null | null | null | null | IMMUNE SYSTEM | 02/02/07 | The structure of the anti-c-myc antibody 9E10 Fab fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Krauss, N., Scheerer, P., Hoehne, W. | 2.2 | X-RAY DIFFRACTION | 0.317 | 0.261 | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
7jxc | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/27/20 | Mapping neutralizing and immunodominant sites on the SARS-CoV-2 spike receptor-binding domain by structure-guided high-resolution serology | HOMO SAPIENS | homo sapiens | homo sapiens | null | Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 2.47 | X-RAY DIFFRACTION | 0.226 | 0.187 | false | true | IGHV3 | IGLV6 | Lambda | null | null | null | null | null |
7dm1 | D | C | 0 | A | protein | null | phosphate-binding protein psts 1 | TRANSPROT PROTEIN/IMMUNE SYSTEM | 12/01/20 | crystal structure of the M.tuberculosis phosphate ABC transport receptor PstS-1 in complex with Fab p4-36 | MYCOBACTERIUM TUBERCULOSIS H37RV; HOMO SAPIENS | homo sapiens | homo sapiens | mycobacterium tuberculosis h37rv | Ma, B., Freund, N., Xiang, Y. | 2.1 | X-RAY DIFFRACTION | 0.230 | 0.186 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
7ksg | D | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 11/22/20 | SARS-CoV-2 spike in complex with nanobodies E | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; CAMELUS BACTRIANUS | camelus bactrianus | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 3.33 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6ugs | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/26/19 | Crystal structure of the Fab fragment of PF06438179/GP1111 an infliximab biosimilar in a C-centered orthorhombic crystal form, Lot A | HOMO SAPIENS | homo sapiens | homo sapiens | null | Lerch, T.F., Sharpe, P., Mayclin, S.J., Edwards, T.E., Polleck, S., Rouse, J.C., Conlan, H. | 1.95 | X-RAY DIFFRACTION | 0.198 | 0.159 | false | true | IGHV6 | IGKV5 | Kappa | null | null | null | null | null |
7r98 | E | null | 0 | B | protein | null | nucleoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/28/21 | Structure of the SARS-CoV-2 N protein RNA-binding domain bound to single-domain antibody B6 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | Corbett, K.D., Ye, Q. | 2.51 | X-RAY DIFFRACTION | 0.273 | 0.226 | false | true | IGHV1 | null | null | null | null | null | null | null |
5e1a | A | B | 0 | C | protein | null | ph-gated potassium channel kcsa | METAL TRANSPORT | 09/29/15 | Structure of KcsA with L24C/R117C mutations | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Upadhyay, V., Kim, D.M., Nimigean, C.M. | 3.4 | X-RAY DIFFRACTION | 0.257 | 0.247 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
5l9d | H | L | 0 | L | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 06/10/16 | AFAMIN ANTIBODY FRAGMENT, N14 FAB, L1- GLYCOSYLATED, CRYSTAL FORM I, parsimonious model | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Rupp, B., Naschberger, A. | 1.88 | X-RAY DIFFRACTION | 0.215 | 0.176 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
1jhl | H | L | 0 | A | protein | null | pheasant egg white lysozyme | COMPLEX(ANTIBODY-ANTIGEN) | 05/04/93 | THREE-DIMENSIONAL STRUCTURE OF A HETEROCLITIC ANTIGEN-ANTIBODY CROSS-REACTION COMPLEX | MUS MUSCULUS; PHASIANUS COLCHICUS | mus musculus | mus musculus | phasianus colchicus | Chitarra, V., Alzari, P.M., Bentley, G.A., Bhat, T.N., Eisele, J.-L., Poljak, R.J. | 2.4 | X-RAY DIFFRACTION | unknown | 0.214 | false | true | IGHV1 | IGKV16 | Kappa | null | null | null | null | null |
7dzy | O | P | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 01/26/21 | Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 2490 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, Y., Soh, W.T., Li, S., Kishikawa, J., Hirose, M., Kato, T., Standley, D., Okada, M., Arase, H. | 3.6 | ELECTRON MICROSCOPY / HOMOLOGY MODEL | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
4yzf | G | H | 0 | B | protein | null | band 3 anion transport protein | IMMUNE SYSTEM | 03/25/15 | Crystal structure of the anion exchanger domain of human erythrocyte Band 3 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Alguel, Y., Arakawa, T., Yugiri, T.K., Iwanari, H., Hatae, H., Iwata, M., Abe, Y., Hino, T., Suno, C.I., Kuma, H., Kang, D., Murata, T., Hamakubo, T., Cameron, A.D., Kobayashi, T., Hamasaki, N., Iwata, S. | 3.5 | X-RAY DIFFRACTION | 0.290 | 0.274 | false | false | IGHV8 | IGKV3 | Kappa | null | null | null | null | null |
7nxa | A | B | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/17/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 B.1.351 variant Spike glycoprotein in complex with COVOX-222 and EY6A Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D. | 2.5 | X-RAY DIFFRACTION | 0.253 | 0.205 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5bvj | H | G | 0 | null | null | null | null | IMMUNE SYSTEM | 06/05/15 | The molecular mode of action and species specificity of canakinumab, a human monoclonal antibody neutralizing IL-1beta | HOMO SAPIENS | homo sapiens | homo sapiens | null | Rondeau, J.M. | 2.0 | X-RAY DIFFRACTION | 0.228 | 0.186 | false | true | IGHV3 | IGKV6 | Kappa | null | null | null | null | null |
4cmh | B | C | 0 | A | protein | null | adp-ribosyl cyclase 1 | HYDROLASE/IMMUNE SYSTEM | 01/15/14 | Crystal structure of CD38 with a novel CD38-targeting antibody SAR650984 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Deckert, J., Wetzel, M.C., Park, P.U., Bartle, L.M., Skaletskaya, A., Goldmacher, V., Vallee, F., ZhouLiu, Q., Ferrari, P., Pouzieux, S., Lahoute, C., Dumontet, C., Plesa, A., Chiron, M., Lejeune, P., Chittenden, T., Blanc, V. | 1.53 | X-RAY DIFFRACTION | 0.2082 | 0.1878 | false | false | IGHV1 | IGKV6 | Kappa | 0 | -13.231763 | Fluorescence | null | TBD |
6w0e | A | B | 0 | C | protein | null | ph-gated potassium channel kcsa | MEMBRANE PROTEIN | 02/29/20 | Open-gate KcsA soaked in 10 mM BaCl2 | RATTUS NORVEGICUS; STREPTOMYCES LIVIDANS | rattus norvegicus | rattus norvegicus | streptomyces lividans | Rohaim, A., Gong, L., Li, J. | 3.512 | X-RAY DIFFRACTION | 0.250 | 0.194 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
5jo5 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 05/02/16 | Crystal structure of 10E8 gHV-gLV antigen-binding fragment. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Joyce, M.G., Mascola, J.R., Kwong, P.D. | 1.7 | X-RAY DIFFRACTION | 0.263 | 0.233 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
2kqm | null | B | 8 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
5vzx | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/29/17 | Crystal structure of crenezumab Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Ultsch, M., Wang, W. | 2.501 | X-RAY DIFFRACTION | 0.230 | 0.185 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3h3b | d | D | 0 | B | protein | null | receptor tyrosine-protein kinase erbb-2 | IMMUNE SYSTEM | 04/16/09 | Crystal structure of the single-chain Fv (scFv) fragment of an anti-ErbB2 antibody chA21 in complex with residues 1-192 of ErbB2 extracellular domain | HOMO SAPIENS; MUS MUSCULUS | null | mus musculus | homo sapiens | Zhou, H., Liu, Y., Niu, L., Zhu, J., Teng, M. | 2.45 | X-RAY DIFFRACTION | 0.255 | 0.201 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4lkc | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 07/07/13 | An Antibody Against the C-terminal Domain of PCSK9 lowers LDL Cholesterol Levels in vivo | HOMO SAPIENS | homo sapiens | homo sapiens | null | Schiele, F., Nar, H. | 2.2 | X-RAY DIFFRACTION | 0.245 | 0.172 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5lsp | H | L | 0 | A | protein | null | hepatocyte growth factor receptor | TRANSFERASE | 09/05/16 | 107_A07 Fab in complex with fragment of the Met receptor | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | DiCara, D., Chirgadze, D.Y., Pope, A., Karatt-Vellatt, A., Winter, A., van den Heuvel, J., Gherardi, E., McCafferty, J. | 2.605 | X-RAY DIFFRACTION | 0.257 | 0.215 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6ell | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/29/17 | FAB Fragment. AbVance: Increasing our knowledge of antibody structural space to enable faster and better decision making in antibody drug discovery | HOMO SAPIENS | homo sapiens | homo sapiens | null | Benz, J., Weigand, S., Dengl, S., Schlothauer, T., Auer, J., Ehler, A., Kettenberger, H., Lorenz, S., Hirschheydt, T., Georges, G. | 1.9 | X-RAY DIFFRACTION | 0.245 | 0.203 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
1ynl | H | L | 0 | L | Hapten | NES | 2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID | IMMUNE SYSTEM | 01/24/05 | Identification of Key residues of the NC6.8 Fab antibody fragment binding to synthetic sweeterners: Crystal structure of NC6.8 co-crystalized with high potency sweetener compound SC45647 | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Gokulan, K., Khare, S., Ronning, D.R., Linthicum, S.D., Sacchettini, J.C., Rupp, B. | 1.7 | X-RAY DIFFRACTION | 0.241 | 0.207 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3g04 | B | A | 0 | C | protein | null | thyrotropin receptor | IMMUNE SYSTEM | 01/27/09 | Crystal structure of the TSH receptor in complex with a thyroid-stimulating autoantibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Sanders, J., Chirgadze, D.Y., Sanders, P., Baker, S., Sullivan, A., Bhardwaja, A., Bolton, J., Reeve, M., Nakatake, N., Evans, M., Richards, T., Powell, M., Miguel, R.N., Blundell, T.L., Furmaniak, J., Smith, B.R. | 2.55 | X-RAY DIFFRACTION | 0.245 | 0.181 | false | true | IGHV5 | IGLV1 | Lambda | null | null | null | null | null |
7ue9 | H | L | 0 | C | protein | null | complement c3dg fragment | IMMUNE SYSTEM | 03/21/22 | Structure of anti-C3d Fab(3d8b) in complex with C3d | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Olland, A.M., White, A., Suto, R.K. | 1.75 | X-RAY DIFFRACTION | 0.201 | 0.171 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
7swd | J | K | 0 | A | C | protein | protein | NA | NA | small/secreted glycoprotein | small/secreted glycoprotein | VIRAL PROTEIN/Immune System | 11/19/21 | Structure of EBOV GP lacking the mucin-like domain with 1C11 scFv and 1C3 Fab bound | ZAIRE EBOLAVIRUS (STRAIN GABON-94); ZAIRE EBOLAVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | zaire ebolavirus (strain gabon-94) | zaire ebolavirus (strain gabon-94) | Milligan, J.C., Yu, X., Saphire, E.O. | 3.59 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
2pr4 | H | L | 0 | null | null | null | null | VIRAL PROTEIN | 05/03/07 | Crystal Structure of Fab' from the HIV-1 Neutralizing Antibody 2F5 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bryson, S., Julien, J.-P., Pai, E.F. | 2.05 | X-RAY DIFFRACTION | 0.270 | 0.240 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
6ni2 | H | L | 0 | B | protein | null | beta-arrestin-1 | SIGNALING PROTEIN/IMMUNE SYSTEM | 12/26/18 | Stabilized beta-arrestin 1-V2T subcomplex of a GPCR-G protein-beta-arrestin mega-complex | LAMA GLAMA; BOS TAURUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | bos taurus | Nguyen, A.H., Thomsen, A.R.B., Cahill, T.J., des Georges, A., Lefkowitz, R.J. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7te1 | C | F | 0 | E | protein | null | spike protein s1 | IMMUNE SYSTEM/Viral Protein | 01/03/22 | SARS-CoV-2 Receptor Binding Domain in Complex with Ab17 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Hauser, B.M., Schmidt, A.G. | 3.5 | X-RAY DIFFRACTION | 0.344 | 0.297 | false | true | IGHV1 | IGKV14 | Kappa | null | null | null | null | null |
2znx | A | a | 0 | Y | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 05/02/08 | 5-Fluorotryptophan Incorporated ScFv10 Complexed to Hen Egg Lysozyme | MUS MUSCULUS; SYNTHETIC CONSTRUCT; GALLUS GALLUS | mus musculus, synthetic construct | null | gallus gallus | DeSantis, M.E., Acchione, M., Li, M., Walter, R.L., Wlodawer, A., Smith-Gill, S. | 2.3 | X-RAY DIFFRACTION | 0.232 | 0.193 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7s6k | F | G | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 09/14/21 | J08 fragment antigen binding in complex with SARS-CoV-2-6P-Mut2 S protein (conformation 2) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Ozorowski, G., Torres, J.L., Ward, A.B. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5xaj | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 03/13/17 | Structural mimicry of the dengue virus envelope glycoprotein revealed by the crystallographic study of an idiotype-anti-idiotype Fab complex. | DENGUE VIRUS | dengue virus | dengue virus | null | Wong, Y.H., Goh, B.C., Lescar, J. | 2.5 | X-RAY DIFFRACTION | 0.239 | 0.185 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5mub | I | J | 0 | K | peptide | null | triple-helical peptide containing the citrullinated c1epitope of collagen type ii,collagen alpha-1(ii) chain,triple-helical peptide containing the citrullinated c1 epitope of collagen type ii | IMMUNE SYSTEM | 01/13/17 | ACC1 Fab fragment in complex with citrullinated C1 epitope of CII (CG05) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Holmdahl, R., Ge, C. | 3.1 | X-RAY DIFFRACTION | 0.264 | 0.231 | false | false | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
1ucb | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 02/06/96 | STRUCTURE OF UNCOMPLEXED FAB COMPARED TO COMPLEX (1CLY, 1CLZ) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Sheriff, S., Bajorath, J. | 2.5 | X-RAY DIFFRACTION | 0.276 | 0.200 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
5ubz | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/21/16 | Fab structure of HIV gp120 specific mAb 1E12 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Pan, R., Kong, X.-P. | 2.75 | X-RAY DIFFRACTION | 0.264 | 0.189 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
2kqm | null | A | 18 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
1mcf | null | B | 0 | P | peptide | null | peptide n-acetyl-l-gln-d-phe-l-his-d-pro-b-ala-b-ala-oh | IMMUNOGLOBULIN | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | HOMO SAPIENS | null | homo sapiens | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
5van | B | null | 0 | A | protein | null | beta-klotho | SIGNALING PROTEIN | 03/27/17 | Crystal Structure of Beta-Klotho | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Lee, S., Schlessinger, J. | 2.202 | X-RAY DIFFRACTION | 0.211 | 0.186 | false | true | IGHV1 | null | null | null | null | null | null | null |
5vm0 | B | null | 0 | B | Hapten | 9EG | N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea | UNKNOWN FUNCTION | 04/26/17 | The hapten triclocarban bound to the single domain camelid nanobody VHH T9 | LAMA GLAMA | lama glama | null | lama glama | Wogulis, L.A., Wogulis, M.D., Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.79 | X-RAY DIFFRACTION | 0.242 | 0.204 | false | true | IGHV1 | null | null | 0 | -11.999727 | Unknown | null | TBD |
6u8k | F | G | 0 | C | nucleic-acid | null | jiiiabc rna (68-mer) | RNA/Immune System | 09/05/19 | Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV3 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | hepacivirus c | Koirala, D., Lewicka, A., Koldobskaya, Y., Huang, H., Piccirilli, J.A. | 2.75 | X-RAY DIFFRACTION | 0.222 | 0.186 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7l57 | H | L | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/21/20 | Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-15 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Rapp, M., Shapiro, L. | 5.87 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
4z7o | H | L | 0 | A | D | protein | protein | NA | NA | integrin alpha-iib | integrin beta-3 | Membrane protein/Immune system | 04/07/15 | Integrin alphaIIbbeta3 in complex with AGDV peptide | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | homo sapiens | Lin, F.Y., Zhu, J., Springer, T.A. | 2.85 | X-RAY DIFFRACTION | 0.257 | 0.223 | false | true | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
6y9b | J | N | 0 | B | protein | null | metalloreductase steap1 | MEMBRANE PROTEIN | 05/20/20 | Cryo-EM structure of trimeric human STEAP1 bound to three Fab120.545 fragments | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Oosterheert, W., Gros, P. | 2.97 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV8 | Kappa | null | null | null | null | null |
6k68 | C | D | 0 | E | protein | null | protein a | STRUCTURAL PROTEIN | 06/01/19 | Application of anti-helix antibodies in protein structure determination (8420-3MNZ) | HUMAN IMMUNODEFICIENCY VIRUS 1; STAPHYLOCOCCUS AUREUS | human immunodeficiency virus 1 | human immunodeficiency virus 1 | staphylococcus aureus | Lee, J.O., Jin, M.S., Kim, J.W., Kim, S., Lee, H., Cho, G.Y. | 3.2 | X-RAY DIFFRACTION | 0.318 | 0.289 | false | true | IGHV9 | IGKV8 | Kappa | null | null | null | null | null |
6rlm | K | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/02/19 | Crystal structure of AT1412dm Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Neviani, V., Pearce, N.M., Pos, W., Schotte, R., Spits, H., Gros, P. | 2.5 | X-RAY DIFFRACTION | 0.267 | 0.242 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
7ns6 | H | null | 0 | J | protein | null | spike glycoprotein,fibritin | VIRAL PROTEIN | 03/05/21 | SARS-CoV-2 Spike (dimers) in complex with six Fu2 nanobodies | VICUGNA PACOS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; ENTEROBACTERIA PHAGE T4 | vicugna pacos | null | severe acute respiratory syndrome coronavirus2, enterobacteria phage t4 | Das, H., Hallberg, B.M. | 3.18 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6mhg | B | O | 0 | E | protein | null | circumsporozoite protein | IMMUNE SYSTEM | 09/17/18 | Cryo-EM structure of the circumsporozoite protein of Plasmodium falciparum with a vaccine-elicited antibody reveals maturation of inter-antibody contacts | PLASMODIUM FALCIPARUM; HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium falciparum | Cottrell, C.A., Torres, J.L., Ward, A.B. | 3.57 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7mta | H | L | 1 | G | protein | null | rhodopsin kinase grk1 | MEMBRANE, Signaling protein/Immune System | 05/13/21 | Rhodopsin kinase (GRK1)-S5E/S488E/T489E in complex with rhodopsin and Fab1 | BOS TAURUS; HOMO SAPIENS | homo sapiens | homo sapiens | bos taurus | Chen, Q., Chen, C.-L., Tesmer, J.J.G. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1cly | H | L | 0 | H | carbohydrate | FUC | polysaccharide | IMMUNOGLOBULIN | 03/15/95 | IGG FAB (HUMAN IGG1, KAPPA) CHIMERIC FRAGMENT (CBR96) COMPLEXED WITH LEWIS Y NONOATE METHYL ESTER | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Sheriff, S., Bajorath, J. | 2.5 | X-RAY DIFFRACTION | 0.298 | 0.238 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7ksg | E | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 11/22/20 | SARS-CoV-2 spike in complex with nanobodies E | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; CAMELUS BACTRIANUS | camelus bactrianus | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 3.33 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
5fhc | H | L | 0 | K | protein | null | envelope glycoprotein,envelope glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/21/15 | Crystal Structure of Protective Human Antibodies 100 and 114 in Complex with Ebola Virus Fusion Glycoprotein (GP) | HOMO SAPIENS; ZAIRE EBOLAVIRUS; ZAIRE EBOLAVIRUS (STRAIN MAYINGA-76) | homo sapiens | homo sapiens | zaire ebolavirus | Gilman, M.S.A., McLellan, J.S. | 6.704 | X-RAY DIFFRACTION | 0.343 | 0.260 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6s8i | P | O | 0 | C | protein | null | enveloped glycoprotein 1 | VIRAL PROTEIN | 07/10/19 | Structure of ZEBOV GP in complex with 3T0265 antibody | HOMO SAPIENS; EBOLA VIRUS | homo sapiens | homo sapiens | ebola virus | Diskin, R., Cohen-Dvashi, H. | 2.99 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
3ikc | B | A | 0 | B | Hapten | KME | (1E)-PROP-1-EN-1-YL 3-DEOXY-7-O-METHYL-ALPHA-D-MANNO-OCT-2-ULOPYRANOSIDONIC ACID | IMMUNE SYSTEM | 08/05/09 | Structure of S67-27 in Complex with Kdo(2.8)-7-O-methyl-Kdo | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Brooks, C.L., Blackler, R.J., Evans, S.V. | 2.6 | X-RAY DIFFRACTION | 0.291 | 0.235 | false | false | IGHV7 | IGKV8 | Kappa | 0 | -10.171711 | Unknown | null | TBD |
6ni2 | A | null | 0 | B | V | protein | peptide | NA | NA | beta-arrestin-1 | vasopressin v2 receptor | SIGNALING PROTEIN/IMMUNE SYSTEM | 12/26/18 | Stabilized beta-arrestin 1-V2T subcomplex of a GPCR-G protein-beta-arrestin mega-complex | LAMA GLAMA; BOS TAURUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | lama glama | null | bos taurus | homo sapiens | Nguyen, A.H., Thomsen, A.R.B., Cahill, T.J., des Georges, A., Lefkowitz, R.J. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
5euk | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 11/18/15 | Cetuximab Fab in complex with F3H meditope variant | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.5 | X-RAY DIFFRACTION | 0.234 | 0.171 | false | true | IGHV2 | IGKV5 | Kappa | null | null | null | null | null |
7k43 | F | G | 0 | E | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/14/20 | SARS-CoV-2 spike in complex with the S2M11 neutralizing antibody Fab fragment | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5o2u | D | null | 0 | C | protein | null | capsid protein p24 | VIRUS | 05/22/17 | Llama VHH in complex with p24 | LAMA GLAMA; HUMAN IMMUNODEFICIENCY VIRUS 1 | lama glama | null | human immunodeficiency virus 1 | Caillat, C., Verrips, T., Weissenhorn, W. | 2.76 | X-RAY DIFFRACTION | 0.256 | 0.222 | false | true | IGHV1 | null | null | 0 | -12.498046 | SPR | null | TBD |
4s1r | H | L | 0 | G | protein | null | clade a/e 93th057 hiv-1 gp120 core | VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR | 01/14/15 | Crystal structure of a VRC01-lineage antibody, 45-VRC01.H08.F-117225, in complex with clade A/E HIV-1 gp120 core | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kwon, Y.D., Yang, Y., Zhang, B., Kwong, P.D. | 3.214 | X-RAY DIFFRACTION | 0.286 | 0.261 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
7t5f | B | null | 0 | A | protein | null | botulinum neurotoxin type b | TOXIN | 12/12/21 | Botulinum neurotoxin Type B Light Chain complexed with nanobodies JLJ-G3 and JNE-B10 | CLOSTRIDIUM BOTULINUM; CAMELIDAE | camelidae | null | clostridium botulinum | Jin, R., Lam, K.-H. | 2.6 | X-RAY DIFFRACTION | 0.222 | 0.194 | false | true | IGHV3 | null | null | null | null | null | null | null |
5vcn | F | E | 0 | A | protein | null | peptidase 1 | IMMUNE SYSTEM | 03/31/17 | THE CRYSTAL STRUCTURE OF DER P 1 ALLERGEN COMPLEXED WITH FAB FRAGMENT OF MAB 5H8 | MUS MUSCULUS; DERMATOPHAGOIDES PTERONYSSINUS | mus musculus | mus musculus | dermatophagoides pteronyssinus | Osinski, T., Majorek, K.A., Pomes, A., Offermann, L.R., Osinski, S., Glesner, J., Vailes, L.D., Chapman, M.D., Minor, W., Chruszcz, M. | 3.0 | X-RAY DIFFRACTION | 0.265 | 0.219 | false | true | IGHV2 | IGKV10 | Kappa | null | null | null | null | null |
6e1k | D | C | 0 | B | protein | null | two pore calcium channel protein 1 | MEMBRANE PROTEIN | 07/10/18 | Structure of AtTPC1(DDE) reconstituted in saposin A with cat06 Fab | ARABIDOPSIS THALIANA; HOMO SAPIENS | homo sapiens | homo sapiens | arabidopsis thaliana | Kintzer, A.F., Green, E.M., Cheng, Y., Stroud, R.M. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1bz7 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 11/06/98 | FAB FRAGMENT FROM MURINE ASCITES | MUS MUSCULUS | mus musculus | mus musculus | null | Kaminski, M.J., Mackenzie, C.R., Mooibroek, M.J., Dahms, T.E.S., Hirama, T., Houghton, A.N., Chapman, P.B., Evans, S.V. | 2.5 | X-RAY DIFFRACTION | unknown | 0.162 | false | false | IGHV5 | IGKV10 | Kappa | null | null | null | null | null |
6att | H | L | 0 | A | protein | null | receptor tyrosine-protein kinase erbb-2 | IMMUNE SYSTEM | 08/29/17 | 39S Fab bound to HER2 ecd | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Oganesyan, V.Y., Dall'Acqua, W.F. | 3.77 | X-RAY DIFFRACTION | 0.289 | 0.251 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
6dde | E | e | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 05/10/18 | Mu Opioid Receptor-Gi Protein Complex | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | Koehl, A., Hu, H., Maeda, S., Manglik, A., Zhang, Y., Kobilka, B.K., Skiniotis, G., Weis, W.I. | 3.5 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6mzj | H | L | 0 | A | protein | null | 426c ds-sosip d3 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/05/18 | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Borst, A.J., Weidle, C.E., Gray, M.D., Frenz, B., Snijder, J., Joyce, M.G., Georgiev, I.S., Stewart-Jones, G.B.E., Kwong, P.D., McGuire, A.T., DiMaio, F., Stamatatos, L., Pancera, M., Veesler, D. | 4.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6e5p | 3 | 4 | 0 | E | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN | 07/21/18 | Backbone model based on cryo-EM map at 8.5 A of domain-swapped, glycan-reactive, neutralizing antibody 2G12 bound to HIV-1 Env BG505 DS-SOSIP, which was also bound to CD4-binding site antibody VRC03 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Kwong, P.D. | 8.8 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
6usf | H | L | 0 | D | protein | null | chimera of soluble cytochrome b562 (bril) and neuronalacetylcholine receptor subunit alpha-4 | MEMBRANE PROTEIN/IMMUNE SYSTEM | 10/26/19 | CryoEM structure of human alpha4beta2 nicotinic acetylcholine receptor with varenicline in complex with anti-BRIL synthetic antibody BAK5 | HOMO SAPIENS; ESCHERICHIA COLI | homo sapiens | homo sapiens | homo sapiens, escherichia coli | Alvarez, F.J.D., Mukherjee, S., Han, S., Ammirati, M., Kossiakoff, A.A. | 3.87 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6ey6 | K | null | 0 | C | protein | null | t9ss component cytoplasmic membrane protein porm | PROTEIN TRANSPORT | 11/10/17 | C-terminal part (residues 315-516) of PorM with the llama naobody nb130 | PORPHYROMONAS GINGIVALIS; LAMA GLAMA | lama glama | null | porphyromonas gingivalis | Leone, P., Cambillau, C., Roussel, A. | 2.1 | X-RAY DIFFRACTION | 0.215 | 0.181 | false | true | IGHV1 | null | null | null | null | null | null | null |
6oo0 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/01/20 | Crystal structure of bovine Fab NC-Cow1 | BOS TAURUS | bos taurus | bos taurus | null | Stanfield, R.L., Wilson, I.A. | 2.1 | X-RAY DIFFRACTION | 0.238 | 0.202 | false | true | unknown | IGLV1 | Lambda | null | null | null | null | null |
5njd | T | S | 0 | G | F | protein | protein | NA | NA | interleukin-12 subunit beta | interleukin-23 subunit alpha | IMMUNE SYSTEM | 03/28/17 | Structure of Interleukin 23 in complex with Briakinumab FAb | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Bloch, Y., Savvides, S.N. | 3.9 | X-RAY DIFFRACTION | 0.312 | 0.272 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7q9p | E | F | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 11/12/21 | Beta-06 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 4.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
5nml | F | null | 0 | null | null | null | null | IMMUNE SYSTEM | 04/06/17 | Nb36 Ser85Cys with Hg bound | LAMA GLAMA | lama glama | null | null | Hansen, S.B., Andersen, K.R., Laursen, N.S., Andersen, G.R. | 2.5 | X-RAY DIFFRACTION | 0.265 | 0.238 | false | true | IGHV1 | null | null | null | null | null | null | null |
1q9w | D | C | 0 | C | carbohydrate | KDO | polysaccharide | IMMUNE SYSTEM | 08/26/03 | S45-18 Fab pentasaccharide bisphosphate complex | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Nguyen, H.P., Seto, N.O., MacKenzie, C.R., Brade, L., Kosma, P., Brade, H., Evans, S.V. | 1.75 | X-RAY DIFFRACTION | 0.247 | 0.212 | false | false | IGHV7 | IGKV8 | Kappa | null | null | null | null | null |
5b3n | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 03/04/16 | The crystal structure of anti-H4K20me1_scFv, 15F11 | SYNTHETIC CONSTRUCT | synthetic construct | null | null | Kujirai, T., Horikoshi, N., Kurumizaka, H. | 1.94 | X-RAY DIFFRACTION | 0.244 | 0.203 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7qn7 | G | null | 0 | D | protein | null | gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 12/20/21 | Cryo-EM structure of human full-length extrasynaptic alpha4beta3delta GABA(A)R in complex with GABA, histamine and nanobody Nb25 | HOMO SAPIENS | homo sapiens | null | homo sapiens | Sente, A., Desai, R., Naydenova, K., Malinauskas, T., Jounaidi, Y., Miehling, J., Zhou, X., Masiulis, S., Hardwick, S.W., Chirgadze, D.Y., Miller, K.W., Aricescu, A.R. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7khf | H | B | 0 | I | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 10/21/20 | CryoEM structure of LILRB1 D3D4 domain-inserted antibody MDB1 Fab in complex with Plasmodium RIFIN (PF3D7_1373400) V2 domain | HOMO SAPIENS; PLASMODIUM FALCIPARUM (ISOLATE 3D7) | homo sapiens | homo sapiens | null | Xu, K., Kwong, P.D. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGLV3 | Lambda | null | null | null | null | null |
3if1 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 07/23/09 | Crystal structure of 237mAb in complex with a GalNAc | MUS MUSCULUS | mus musculus | mus musculus | null | Brooks, C.L., Evans, S.V., Borisova, S.N. | 2.39 | X-RAY DIFFRACTION | 0.285 | 0.224 | false | true | IGHV6 | IGKV1 | Kappa | null | null | null | null | null |
6xjq | H | L | 0 | A | nucleic-acid | null | self-alkylating ribozyme (58-mer) | RNA/IMMUNE SYSTEM | 06/24/20 | Crystal structure of a self-alkylating ribozyme - alkylated form with biotinylated epoxide substrate | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | aeropyrum pernix | Koirala, D., Piccirilli, J.A. | 1.708 | X-RAY DIFFRACTION | 0.213 | 0.189 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7rqp | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 08/06/21 | Structure of PfCSP NPNV binding antibody L9 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Hurlburt, N.K., Pancera, M. | 2.98 | X-RAY DIFFRACTION | 0.250 | 0.199 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4kka | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | TRANSPORT PROTEIN | 05/05/13 | Structure of the E148A mutant of CLC-ec1 deltaNC construct in 100mM fluoride and 20mM Bromide | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Lim, H.-H., Miller, C. | 3.0 | X-RAY DIFFRACTION | 0.265 | 0.220 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6o41 | B | A | 0 | N | protein | null | immunoglobulin g-binding protein g (domain iii) | IMMUNE SYSTEM | 02/27/19 | Crystal structure of the unbound PGZL1 germline Fab fragment (PGZL1_gVmDmJ) | HOMO SAPIENS; STREPTOCOCCUS SP. GROUP G | homo sapiens | homo sapiens | streptococcus sp. group g | Irimia, A., Wilson, I.A. | 2.465 | X-RAY DIFFRACTION | 0.219 | 0.169 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7c01 | H | L | 0 | A | protein | null | sars-cov-2 spike protein s1 | VIRAL PROTEIN | 05/27/20 | Molecular basis for a potent human neutralizing antibody targeting SARS-CoV-2 RBD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Shi, R., Qi, J., Wang, Q., Gao, F.G., Yan, J. | 2.88 | X-RAY DIFFRACTION | 0.265 | 0.218 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3cm9 | C | N | 1 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6ssp | L | null | 0 | H | G | F | I | J | protein | protein | protein | protein | protein | NA | NA | NA | NA | NA | cys-loop ligand-gated ion channel | cys-loop ligand-gated ion channel | cys-loop ligand-gated ion channel | cys-loop ligand-gated ion channel | cys-loop ligand-gated ion channel | TRANSPORT PROTEIN | 09/09/19 | Structure of the pentameric ligand-gated ion channel ELIC in complex with a NAM nanobody | DICKEYA CHRYSANTHEMI; LAMA GLAMA | lama glama | null | dickeya chrysanthemi | dickeya chrysanthemi | dickeya chrysanthemi | dickeya chrysanthemi | dickeya chrysanthemi | Ulens, C., Brams, M., Evans, G.L., Spurny, R., Govaerts, C., Pardon, E., Steyaert, J. | 3.25 | X-RAY DIFFRACTION | 0.264 | 0.248 | false | true | IGHV1 | null | null | null | null | null | null | null |
1ol0 | B | null | 0 | null | null | null | null | IMMUNOGLOBULIN | 08/02/03 | Crystal structure of a camelised human VH | HOMO SAPIENS | homo sapiens | null | null | Dottorini, T., K Vaughan, C., Walsh, M.A., Losurdo, P., Sollazzo, M. | 1.8 | X-RAY DIFFRACTION | 0.18015 | 0.15449 | false | true | IGHV3 | null | null | null | null | null | null | null |
3sob | H | L | 0 | B | protein | null | low-density lipoprotein receptor-related protein 6 | PROTEIN BINDING/IMMUNE SYSTEM | 06/30/11 | The structure of the first YWTD beta propeller domain of LRP6 in complex with a FAB | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wang, W., Bourhis, E., Tam, C., Zhang, Y., Rouge, L., Wu, Y., Franke, Y., Cochran, A.G. | 1.9 | X-RAY DIFFRACTION | 0.212 | 0.174 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6pci | I | L | 0 | B | protein | null | virion spike glycoprotein | immune system, viral protein | 06/17/19 | EBOV GPdMuc (Makona) in complex with rEBOV-520 and rEBOV-548 Fabs | EBOLA VIRUS; HOMO SAPIENS; ZAIRE EBOLAVIRUS | homo sapiens | homo sapiens | ebola virus | Ward, A.B., Murin, C.D., Alkutkar, T. | 4.12 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7jwp | K | L | 0 | V | peptide | null | il-18 peptide | IMMUNE SYSTEM | 08/26/20 | Fab CJ11 in complex IL-18 peptide liberated by Caspase cleavage | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Payandeh, J., Ho, H. | 3.0 | X-RAY DIFFRACTION | 0.260 | 0.235 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6o3l | A | B | 0 | E | peptide | null | mper peptide, region 671-683 of hiv-1 gp41 | IMMUNE SYSTEM | 02/26/19 | Crystal structure of the Fab fragment of the human HIV-1 neutralizing antibody PGZL1.H4K3 in complex with its MPER peptide epitope (region 671-683 of HIV-1 gp41). | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Irimia, A., Wilson, I.A. | 1.98 | X-RAY DIFFRACTION | 0.211 | 0.170 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
2old | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 01/19/07 | Bence Jones KWR Protein- Immunoglobulin Light Chain Dimer, P3(2)21 Crystal Form | HOMO SAPIENS | null | homo sapiens | null | Makino, D.L., Larson, S.B., McPherson, A. | 2.6 | X-RAY DIFFRACTION | 0.254 | 0.215 | false | false | null | IGLV2 | Lambda | null | null | null | null | null |
7cwt | I | J | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/31/20 | SARS-CoV-2 Spike protein in complex with hb27 and fc05 Fab cocktail | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Cui, Z., Wang, X. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
5aaw | K | k | 0 | L | protein | null | dengue serotype 4 envelope protein domain 3 | null | 07/30/15 | Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency | DENGUE VIRUS; MUS MUSCULUS | mus musculus | null | dengue virus | Wong, Y., Robinson, L., Lescar, J., Sasisekharan, R. | 3.27 | X-RAY DIFFRACTION | 0.26258 | 0.22661 | true | true | unknown | unknown | unknown | 0 | -11.411242 | SPR | null | TBD |
7kkl | E | null | 0 | C | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 10/27/20 | SARS-CoV-2 Spike in complex with neutralizing nanobody mNb6 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Schoof, M.S., Faust, B.F., Saunders, R.A., Sangwan, S., Rezelj, V., Hoppe, N., Boone, M., Billesboelle, C.B., Puchades, C., Azumaya, C.M., Kratochvil, H.T., Zimanyi, M., Desphande, I., Liang, J., Dickinson, S., Nguyen, H.C., Chio, C.M., Merz, G.E., Thompson, M.C., Diwanji, D., Schaefer, K., Anand, A.A., Dobzinski, N., ... | 2.85 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3eoa | H | L | 0 | I | protein | null | integrin alpha-l | IMMUNE SYSTEM/CELL ADHESION | 09/26/08 | Crystal structure the Fab fragment of Efalizumab in complex with LFA-1 I domain, Form I | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Li, S., Ding, J. | 2.8 | X-RAY DIFFRACTION | 0.264 | 0.225 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -11.8 | SPR | 25 | 19258452 |
5vh3 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 04/12/17 | Crystal structure of Fab fragment of the anti-TNFa antibody infliximab in a C-centered orthorhombic crystal form | MUS MUSCULUS | mus musculus | mus musculus | null | Mayclin, S.J., Edwards, T.E., Lerch, T.F., Conlan, H., Sharpe, P. | 2.0 | X-RAY DIFFRACTION | 0.200 | 0.160 | false | true | IGHV6 | IGKV5 | Kappa | null | null | null | null | null |
7eh5 | E | P | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 03/28/21 | Cryo-EM structure of SARS-CoV-2 S-D614G variant in complex with neutralizing antibodies, RBD-chAb15 and RBD-chAb45 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yang, T.J., Yu, P.Y., Chang, Y.C., Wu, H.C., Hsu, S.T.D. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGKV5 | Kappa | null | null | null | null | null |
7eh3 | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 03/28/21 | Structure of Nanobody Nb23 in solution using NMR spectroscopy | LAMA GLAMA | lama glama | null | null | Percipalle, M., Hunashal, Y., Esposito, G., Fogolari, F. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7mdt | H | L | 0 | A | protein | null | surface protein gp120 | VIRAL PROTEIN | 04/06/21 | BG505 SOSIP.v5.2 in complex with the monoclonal antibody Rh4O9.8 (as Fab fragment) | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Antanasijevic, A., Ozorowski, G., Nogal, B., Ward, A.B. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
4q6i | H | L | 0 | C | protein | null | t-cell surface glycoprotein cd4 | IMMUNE SYSTEM | 04/22/14 | Crystal structure of murine 2D5 Fab, a potent anti-CD4 HIV-1-neutralizing antibody in complex with CD4 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Boyington, J.C., Nabel, G.J., Mascola, J.R. | 3.65 | X-RAY DIFFRACTION | 0.257 | 0.226 | false | false | IGHV9 | IGKV3 | Kappa | null | null | null | null | null |
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