Datasets:

Tim419
/

GLMap-panels

element	group	target	emitted	datasets
promoter	Human	1400	1400	3
enhancer	Human	1400	1400	1
splice_donor	Human	600	600	1
splice_acceptor	Human	600	600	1
chromatin_access	Plant	450	450	7
polyA	Plant	350	350	6
lncRNA	Plant	300	300	6
nascent_RNA	Plant	200	200	1
splicing_plant_donor	Plant	150	150	1
splicing_plant_acceptor	Plant	150	150	1
yeast_genome	Fungi	1200	1200	10
fungi_genome	Fungi	1500	1500	1
virus_variants	Virus	600	600	1
virus_species	Virus	1100	1100	1

Length distribution

count	mean	std	min	25%	50%	75%	max
10000	610.1	334.9	156	300	500	1024	1024

Species × functional element cross-tab

functional_element	species	n
chromatin_access	Arabidopsis thaliana	64
chromatin_access	Brachypodium distachyon	64
chromatin_access	Oryza sativa MH63	64
chromatin_access	Oryza sativa ZS97	64
chromatin_access	Setaria italica	64
chromatin_access	Sorghum bicolor	65
chromatin_access	Zea mays	65
enhancer	Homo sapiens	1400
fungi_genome	fungi_sp_0	75
fungi_genome	fungi_sp_1	75
fungi_genome	fungi_sp_10	75
fungi_genome	fungi_sp_11	75
fungi_genome	fungi_sp_12	75
fungi_genome	fungi_sp_13	75
fungi_genome	fungi_sp_14	75
fungi_genome	fungi_sp_15	75
fungi_genome	fungi_sp_16	75
fungi_genome	fungi_sp_17	75
fungi_genome	fungi_sp_18	75
fungi_genome	fungi_sp_19	75
fungi_genome	fungi_sp_2	75
fungi_genome	fungi_sp_3	75
fungi_genome	fungi_sp_4	75
fungi_genome	fungi_sp_5	75
fungi_genome	fungi_sp_6	75
fungi_genome	fungi_sp_7	75
fungi_genome	fungi_sp_8	75
fungi_genome	fungi_sp_9	75
lncRNA	Glycine max	50
lncRNA	Manihot esculenta	50
lncRNA	Solanum lycopersicum	50
lncRNA	Sorghum bicolor	50
lncRNA	Triticum aestivum	50
lncRNA	Zea mays	50
nascent_RNA	Manihot esculenta	200
polyA	Arabidopsis thaliana	58
polyA	Chlamydomonas reinhardtii	58
polyA	Medicago truncatula	58
polyA	Oryza sativa indica	58
polyA	Oryza sativa japonica	59
polyA	Trifolium pratense	59
promoter	Homo sapiens	1400
splice_acceptor	Homo sapiens	600
splice_donor	Homo sapiens	600
splicing_plant_acceptor	Arabidopsis thaliana	150
splicing_plant_donor	Arabidopsis thaliana	150
virus_species	virus_sp_0	44
virus_species	virus_sp_1	44
virus_species	virus_sp_10	44
virus_species	virus_sp_11	44
virus_species	virus_sp_12	44
virus_species	virus_sp_13	44
virus_species	virus_sp_14	44
virus_species	virus_sp_15	44
virus_species	virus_sp_16	44
virus_species	virus_sp_17	44
virus_species	virus_sp_18	44
virus_species	virus_sp_19	44
virus_species	virus_sp_2	44
virus_species	virus_sp_20	44
virus_species	virus_sp_21	44
virus_species	virus_sp_22	44
virus_species	virus_sp_23	44
virus_species	virus_sp_24	44
virus_species	virus_sp_3	44
virus_species	virus_sp_4	44
virus_species	virus_sp_5	44
virus_species	virus_sp_6	44
virus_species	virus_sp_7	44
virus_species	virus_sp_8	44
virus_species	virus_sp_9	44
virus_variants	covid_var_0	67
virus_variants	covid_var_1	67
virus_variants	covid_var_2	66
virus_variants	covid_var_3	67
virus_variants	covid_var_4	66
virus_variants	covid_var_5	67
virus_variants	covid_var_6	66
virus_variants	covid_var_7	67
virus_variants	covid_var_8	67
yeast_genome	Saccharomyces cerevisiae	1200

GC content by element

functional_element	count	mean	min	max
chromatin_access	450	0.49	0.239	0.75
enhancer	1400	0.483	0.2	0.81
fungi_genome	1500	0.462	0.033	0.665
lncRNA	300	0.458	0.218	0.763
nascent_RNA	200	0.287	0.128	0.424
polyA	350	0.404	0.218	0.672
promoter	1400	0.593	0.29	0.877
splice_acceptor	600	0.487	0.252	0.838
splice_donor	600	0.46	0.242	0.712
splicing_plant_acceptor	150	0.393	0.261	0.505
splicing_plant_donor	150	0.389	0.236	0.513
virus_species	1100	0.354	0.149	0.741
virus_variants	600	0.381	0.322	0.484
yeast_genome	1200	0.383	0.232	0.552