Ribozyme
stringlengths 2
37
| Organism
stringclasses 56
values | Variable_reactant
stringlengths 2
100
⌀ | Kobs
stringlengths 1
19
⌀ | Unit_Kobs
stringclasses 11
values | km
stringclasses 287
values | Unit_Km
stringclasses 11
values | kcat
stringclasses 262
values | Unit_Kcat
stringclasses 9
values | km_kcat
stringlengths 1
16
⌀ | Unit_Kcat/Km
stringclasses 30
values | Kcleav
stringclasses 52
values | Unit_Kcleav
stringclasses 3
values | Commentary[Temp]
stringclasses 29
values | Commentary[pH]
stringclasses 34
values | Commentary[Mutant]
stringlengths 2
89
⌀ | Commentary[Others]
stringlengths 3
94
⌀ | pubmed_id
stringclasses 164
values | Source
stringclasses 4
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8-17
|
NA
|
chimeric RNA/DNA substrate CA
|
0.17
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
18644842
|
Table
|
8-17
|
NA
|
chimeric RNA/DNA substrate UA
|
0.47
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
18644842
|
Table
|
8-17
|
NA
|
chimeric RNA/DNA substrate GC
|
0.36
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
18644842
|
Table
|
8-17
|
NA
|
chimeric RNA/DNA substrate AC
|
0.11
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
18644842
|
Table
|
8-17
|
NA
|
chimeric RNA/DNA substrate CC
|
0.019
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
18644842
|
Table
|
8-17
|
NA
|
chimeric RNA/DNA substrate UC
|
0.0047
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
18644842
|
Table
|
8-17
|
NA
|
chimeric RNA/DNA substrate GU/T
|
0.0037
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
18644842
|
Table
|
8-17
|
NA
|
chimeric RNA/DNA substrate AU/T
|
0.00089
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
18644842
|
Table
|
8-17
|
NA
|
chimeric RNA/DNA substrate CT
|
0.00014
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
18644842
|
Table
|
8-17
|
NA
|
chimeric RNA/DNA substrate UT
|
0.000095
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
18644842
|
Table
|
rPC
|
Pneumocystis carinii
|
NA
|
5
|
/min
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
44°C
|
NA
|
WT
|
50 mM Hepes (25 mM Na+), 135 mM KCl, 15 mM MgCl2, Substrate cleavage
|
18684993
|
Text
|
rPC
|
Pneumocystis carinii
|
NA
|
3.2
|
/min
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
44°C
|
NA
|
WT
|
50 mM Hepes (25 mM Na+), 135 mM KCl, 15 mM MgCl2, Exon ligation
|
18684993
|
Text
|
rT-X
|
Tetrahymena thermophila
|
NA
|
0.17
|
/min
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
44°C
|
NA
|
WT
|
50 mM Hepes (25 mM Na+), 135 mM KCl, 10 mM MgCl2, Substrate cleavage
|
18684993
|
Text
|
rT-X
|
Tetrahymena thermophila
|
NA
|
0.14
|
/min
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
44°C
|
NA
|
WT
|
50 mM Hepes (25 mM Na+), 135 mM KCl, 10 mM MgCl2, Exon ligation
|
18684993
|
Text
|
rC
|
Candida albicans
|
NA
|
0.31
|
/min
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
44°C
|
NA
|
WT
|
50 mM Hepes (25 mM Na+), 135 mM KCl, 25 mM MgCl2, Substrate cleavage
|
18684993
|
Text
|
rC
|
Candida albicans
|
NA
|
0.34
|
/min
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
44°C
|
NA
|
WT
|
50 mM Hepes (25 mM Na+), 135 mM KCl, 25 mM MgCl2, Exon ligation
|
18684993
|
Text
|
8-17 DNAzyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
7 × 10^-4
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
7.5
|
NA
|
4 M Li+, 50 mM Na-HEPES, 25 mM EDTA
|
19326878
|
Table
|
8-17 DNAzyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
1 × 10^-3
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
7.5
|
NA
|
4 M NH4+, 50 mM Na-HEPES, 25 mM EDTA
|
19326878
|
Table
|
8-17 DNAzyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
~10^-5
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
7.5
|
NA
|
4 M Na+, 50 mM Na-HEPES, 25 mM EDTA
|
19326878
|
Table
|
8-17 DNAzyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
0.9
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
7
|
NA
|
10 mM Mg2+
|
19326878
|
Table
|
8-17 DNAzyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
1.3
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
6
|
NA
|
10 mM Zn2+
|
19326878
|
Table
|
8-17 DNAzyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
6.5
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
7
|
NA
|
100 µM Pb2+
|
19326878
|
Table
|
Hammerhead ribozyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
2.9 × 10^-1
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
8
|
NA
|
4 M Li+, 50 mM Na-HEPES, 25 mM EDTA
|
19326878
|
Table
|
Hammerhead ribozyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
7.5 × 10^-3
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
8
|
NA
|
4 M Na+, 50 mM Na-HEPES, 25 mM EDTA
|
19326878
|
Table
|
Hammerhead ribozyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
1.4 × 10^-2
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
8
|
NA
|
4 M NH4+, 50 mM Na-HEPES, 25 mM EDTA
|
19326878
|
Table
|
Hammerhead ribozyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
2.2
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
8
|
NA
|
10 mM Mg2+
|
19326878
|
Table
|
Hammerhead ribozyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
7.1 × 10^-3
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
8
|
NA
|
100 mM Co(NH3 ) 6 3+
|
19326878
|
Table
|
G3 DNAzyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
3.0 × 10^-3
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
7
|
NA
|
500 mM Li+, 50 mM Na-HEPES, 25 mM EDTA
|
19326878
|
Table
|
G3 DNAzyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
4.0 × 10^-3
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
7
|
NA
|
500mM Na+, 50 mM Na-HEPES, 25 mM EDTA
|
19326878
|
Table
|
G3 DNAzyme
|
NA
|
substrate 17S was 5′ labeled with γ-32P dATP
|
4.0 × 10^-3
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
7
|
NA
|
500 mM NH4+, 50 mM Na-HEPES, 25 mM EDTA
|
19326878
|
Table
|
E2
|
NA
|
50-nt RNA substrate
|
0.14
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E18-G15-C1
|
NA
|
50-nt RNA substrate
|
1
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E18-G15-C6
|
NA
|
50-nt RNA substrate
|
1
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E42-G15-C16
|
NA
|
50-nt RNA substrate
|
2.1
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E42-G15-C24
|
NA
|
50-nt RNA substrate
|
1.1
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E74-G15-C30
|
NA
|
50-nt RNA substrate
|
0.48
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E74-G15-C33
|
NA
|
50-nt RNA substrate
|
1.3
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E14-G10
|
NA
|
50-nt RNA substrate
|
0.34
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E14-G15
|
NA
|
50-nt RNA substrate
|
1.7
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Multisource
|
E14-G24
|
NA
|
50-nt RNA substrate
|
1.8
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Multisource
|
E18
|
NA
|
50-nt RNA substrate
|
1.44
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E2-G21
|
NA
|
50-nt RNA substrate
|
0.02
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E18-G21
|
NA
|
50-nt RNA substrate
|
2.52
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E75-G15
|
NA
|
50-nt RNA substrate
|
0.87
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E75-G21
|
NA
|
50-nt RNA substrate
|
0.31
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E88
|
NA
|
50-nt RNA substrate
|
1.6
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E25
|
NA
|
50-nt RNA substrate
|
1.8
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
E42
|
NA
|
50-nt RNA substrate
|
2.1
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
NA
|
100 mM KCl, 400 mM NaCl, 7.5 mM MgCl2, 7.5 mM MnCl2
|
19357090
|
Text
|
VS
|
Neurospora crassa
|
NA
|
0.023
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
8
|
WT
|
10 mM MgCl2, 25 mM KCl, 2 mM spermidine
|
19703941
|
Text
|
VS
|
Neurospora crassa
|
NA
|
1 × 10^-4
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
8
|
A756C
|
10 mM MgCl2, 25 mM KCl, 2 mM spermidine
|
19703941
|
Text
|
VS
|
Neurospora crassa
|
NA
|
9 × 10^-5
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
8
|
G638A
|
10 mM MgCl2, 25 mM KCl, 2 mM spermidine
|
19703941
|
Text
|
VS
|
Neurospora crassa
|
G638A VS RNA
|
NA
|
NA
|
5
|
µM
|
NA
|
NA
|
NA
|
NA
|
0.08
|
min^-1
|
37°C
|
8
|
A756C
|
10 mM MgCl2, 25 mM KCl, 2 mM spermidine
|
19703941
|
Text
|
HHPol13
| null |
HIV-1 IIIB pol gene
|
NA
|
NA
|
576
|
nM
|
3.9
|
min^-1
|
6.8
|
min^-1 µM^-1
|
NA
|
NA
|
37°C
|
7.5
|
WT
|
10 mM MgCl2
|
19732019
|
Text
|
VS
| null |
5'-PO substrate
|
2.4
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
WT
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PS substrate
|
0.37
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
WT
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PO substrate
|
0.00023
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
A756G
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PS substrate
|
0.84
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
A756G
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PO substrate
|
0.14
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
C755G
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PS substrate
|
0.35
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
C755G
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PO substrate
|
0.39
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
G757A
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PS substrate
|
0.22
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
G757A
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PO substrate
|
0.0042
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
A730U
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PS substrate
|
0.038
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
A730U
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PO substrate
|
0.029
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
A756C
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PS substrate
|
0.08
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
A756C
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PO G638DAP substrate
|
0.037
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
WT
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PS G638DAP substrate
|
0.3
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
WT
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PO G638DAP substrate
|
0.0003
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
A756G
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
VS
| null |
5'-PS G638DAP substrate
|
1.05
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
6
|
A756G
|
200 mM Mg^2+ , 25 mM KCl
|
20547881
|
Text
|
CT10-3.29
|
NA
|
rC-T junction
|
0.19
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
WT
|
7.5 mM MgCl2, 7.5 mM MnCl2, 100 mM KCl, 400 mM NaCl
|
20630470
|
Text
|
CT10-3.29
|
NA
|
rC-T junction
|
0.34
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
T
|
7.5 mM MgCl2, 7.5 mM MnCl2, 100 mM KCl, 400 mM NaCl
|
20630470
|
Text
|
CT10-3.29
|
NA
|
rC-T junction
|
1.44
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
M1
|
30 mM MnCl2
|
20630470
|
Text
|
CT10-3.29
|
NA
|
rC-T junction
|
0.82
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
M2
|
30 mM MnCl2
|
20630470
|
Text
|
CT10-3.29
|
NA
|
rC-T junction
|
0.45
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
M3
|
30 mM MnCl2
|
20630470
|
Text
|
CT10-3.29
|
NA
|
rC-T junction
|
0.24
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
M4
|
30 mM MnCl2
|
20630470
|
Text
|
CT10-3.29
|
NA
|
rU-T junction
|
0.71
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
M1
|
30 mM MnCl2
|
20630470
|
Text
|
CT10-3.29M5
|
NA
|
5000 nM rG-A junction
|
NA
|
NA
|
NA
|
NA
|
0.022
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
23°C
|
7
|
M4
|
30 mM MnCl2
|
20630470
|
Text
|
8LV13
|
NA
|
Parent sequences
|
0.14
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.5
|
NA
|
20 mM Mn^2+, 150 mM NaCl, 2 mM KCl
|
20739352
|
Text
|
8LV13
|
NA
|
Tv1
|
0.07
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.5
|
NA
|
20 mM Mn^2+, 150 mM NaCl, 2 mM KCl
|
20739352
|
Text
|
8LV13
|
NA
|
Tsn
|
0.19
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.5
|
NA
|
20 mM Mn^2+, 150 mM NaCl, 2 mM KCl
|
20739352
|
Text
|
8LV13
|
NA
|
Tv2
|
0.1
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.5
|
NA
|
20 mM Mn^2+, 150 mM NaCl, 2 mM KCl
|
20739352
|
Text
|
8LX6
|
NA
|
Parent sequences
|
17.1
|
h^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.5
|
NA
|
20 mM Mn^2+, 150 mM NaCl, 2 mM KCl
|
20739352
|
Text
|
8LX6
|
NA
|
Tv1
|
0.47
|
h^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.5
|
NA
|
20 mM Mn^2+, 150 mM NaCl, 2 mM KCl
|
20739352
|
Text
|
8LX6
|
NA
|
Tsn
|
0.07
|
h^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.5
|
NA
|
20 mM Mn^2+, 150 mM NaCl, 2 mM KCl
|
20739352
|
Text
|
8LX6
|
NA
|
Tv2
|
0.16
|
h^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.5
|
NA
|
20 mM Mn^2+, 150 mM NaCl, 2 mM KCl
|
20739352
|
Text
|
10MD5
|
NA
|
DNA substrate
|
2.7
|
h^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.5
|
WT
|
70 mM HEPES, 20 mM MnCl2, 1 mM ZnCl2, 150 mM NaCl
|
20923239
|
Text
|
9NL27
|
NA
|
DNA substrate
|
0.093
|
h^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.2
|
C3A, T16A, G19C, T25C, C30T
|
70 mM HEPES, 20 mM MnCl2, 1 mM ZnCl2, 150 mM NaCl
|
20923239
|
Text
|
9NL27
|
NA
|
DNA substrate
|
0.88
|
h^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.5
|
C3A, T16A, G19C, T25C, C30T
|
70 mM HEPES, 20 mM MnCl2, 1 mM ZnCl2, 150 mM NaCl
|
20923239
|
Text
|
9NL27
|
NA
|
DNA substrate
|
1.43
|
h^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.7
|
C3A, T16A, G19C, T25C, C30T
|
70 mM HEPES, 20 mM MnCl2, 1 mM ZnCl2, 150 mM NaCl
|
20923239
|
Text
|
hhrI-SewB1_01643s-1
|
NA
|
cleavage site UC
|
27.6
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
10 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
hhrI-SewB1_01643s-1
|
NA
|
cleavage site UC
|
1.7
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
1 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
hhrI-454-SetG2_00452-1
|
NA
|
cleavage site UC
|
20.6
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
10 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
hhrI-454-SetG2_00452-1
|
NA
|
cleavage site UC
|
1.2
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
1 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
hhrI-pak6178-j00497s-1
|
NA
|
cleavage site UC
|
7
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
10 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
hhrI-pak6178-j00497s-1
|
NA
|
cleavage site UC
|
0.15
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
1 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
hhrII-POL_IN_00577s-1
|
NA
|
cleavage site UC
|
37
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
10 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
hhrII-POL_IN_00577s-1
|
NA
|
cleavage site UC
|
0.54
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
1 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
hhrII-SewR3_00810s-1
|
NA
|
cleavage site UC
|
25
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
10 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
hhrII-SewR3_00810s-1
|
NA
|
cleavage site UC
|
23
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
1 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
hhrII-SewS1_01145s-1
|
NA
|
cleavage site UC
|
20
|
min^-1
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
NA
|
37°C
|
7.4
|
NA
|
10 mM Mg^2+, 140 mM KCl, 10 mM NaCl, 10 mM Tris-HCl
|
21257745
|
Table
|
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