kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def _get_interpretation_function(interpretation, dtype): """ Retrieves the interpretation function used. """ type_string = dtype.__name__ name = "%s__%s" % (interpretation, type_string) global _interpretations if not hasattr(_interpretations, name): raise ValueError("No transform ...	[ "def", "_get_interpretation_function", "(", "interpretation", ",", "dtype", ")", ":", "type_string", "=", "dtype", ".", "__name__", "name", "=", "\"%s__%s\"", "%", "(", "interpretation", ",", "type_string", ")", "global", "_interpretations", "if", "not", "hasattr"...	30.533333	19.066667
def graded_submissions(self): ''' Queryset for the graded submissions, which are worth closing. ''' qs = self._valid_submissions().filter(state__in=[Submission.GRADED]) return qs	[ "def", "graded_submissions", "(", "self", ")", ":", "qs", "=", "self", ".", "_valid_submissions", "(", ")", ".", "filter", "(", "state__in", "=", "[", "Submission", ".", "GRADED", "]", ")", "return", "qs" ]	36.166667	26.833333
def updateModel(self, X_all, Y_all, X_new, Y_new): """ Updates the model with new observations. """ if self.model is None: self._create_model(X_all, Y_all) else: self.model.set_XY(X_all, Y_all) # WARNING: Even if self.max_iters=0, the hyperparamet...	[ "def", "updateModel", "(", "self", ",", "X_all", ",", "Y_all", ",", "X_new", ",", "Y_new", ")", ":", "if", "self", ".", "model", "is", "None", ":", "self", ".", "_create_model", "(", "X_all", ",", "Y_all", ")", "else", ":", "self", ".", "model", "....	48.625	26
def _getSDRPairs(self, pairs, noise=None, locationNoise=None, includeRandomLocation=False, numAmbiguousLocations=0): """ This method takes a list of (location, feature) index pairs (one pair per cortical column), ...	[ "def", "_getSDRPairs", "(", "self", ",", "pairs", ",", "noise", "=", "None", ",", "locationNoise", "=", "None", ",", "includeRandomLocation", "=", "False", ",", "numAmbiguousLocations", "=", "0", ")", ":", "sensations", "=", "{", "}", "numpy", ".", "random...	33.824561	14.701754
def make_benchark(n_train, n_test, n_dim=2): """ Compute the benchmarks for Ordianry Kriging Parameters ---------- n_train : int number of points in the training set n_test : int number of points in the test set n_dim : int number of dimensions (default=2) Returns --...	[ "def", "make_benchark", "(", "n_train", ",", "n_test", ",", "n_dim", "=", "2", ")", ":", "X_train", "=", "np", ".", "random", ".", "rand", "(", "n_train", ",", "n_dim", ")", "y_train", "=", "np", ".", "random", ".", "rand", "(", "n_train", ")", "X_...	31.159091	20.636364
def get_words(data): """ Extracts the words from given string. Usage:: >>> get_words("Users are: John Doe, Jane Doe, Z6PO.") [u'Users', u'are', u'John', u'Doe', u'Jane', u'Doe', u'Z6PO'] :param data: Data to extract words from. :type data: unicode :return: Words. :rtype: l...	[ "def", "get_words", "(", "data", ")", ":", "words", "=", "re", ".", "findall", "(", "r\"\\w+\"", ",", "data", ")", "LOGGER", ".", "debug", "(", "\"> Words: '{0}'\"", ".", "format", "(", "\", \"", ".", "join", "(", "words", ")", ")", ")", "return", "w...	23.833333	20.722222
def generate(declaration, headers=None, has_iterators=False): """Compile and load the reflection dictionary for a type. If the requested dictionary has already been cached, then load that instead. Parameters ---------- declaration : str A type declaration (for example "vector<int>") he...	[ "def", "generate", "(", "declaration", ",", "headers", "=", "None", ",", "has_iterators", "=", "False", ")", ":", "global", "NEW_DICTS", "# FIXME: _rootpy_dictionary_already_exists returns false positives", "# if a third-party module provides \"incomplete\" dictionaries.", "#if c...	41.573034	19.303371
def create_db(name, owner=None, encoding=u'UTF-8', template='template1', **kwargs): """Create a Postgres database.""" flags = u'' if encoding: flags = u'-E %s' % encoding if owner: flags = u'%s -O %s' % (flags, owner) if template and template != 'template1': fl...	[ "def", "create_db", "(", "name", ",", "owner", "=", "None", ",", "encoding", "=", "u'UTF-8'", ",", "template", "=", "'template1'", ",", "", "", "kwargs", ")", ":", "flags", "=", "u''", "if", "encoding", ":", "flags", "=", "u'-E %s'", "%", "encoding",...	35.333333	18.416667
def validate_page(ctx, param, value): """Ensure that a valid value for page is chosen.""" # pylint: disable=unused-argument if value == 0: raise click.BadParameter( "Page is not zero-based, please set a value to 1 or higher.", param=param ) return value	[ "def", "validate_page", "(", "ctx", ",", "param", ",", "value", ")", ":", "# pylint: disable=unused-argument", "if", "value", "==", "0", ":", "raise", "click", ".", "BadParameter", "(", "\"Page is not zero-based, please set a value to 1 or higher.\"", ",", "param", "=...	36.25	16.875
def characterize_local_files(filedir, max_bytes=MAX_FILE_DEFAULT): """ Collate local file info as preperation for Open Humans upload. Note: Files with filesize > max_bytes are not included in returned info. :param filedir: This field is target directory to get files from. :param max_bytes: This fi...	[ "def", "characterize_local_files", "(", "filedir", ",", "max_bytes", "=", "MAX_FILE_DEFAULT", ")", ":", "file_data", "=", "{", "}", "logging", ".", "info", "(", "'Characterizing files in {}'", ".", "format", "(", "filedir", ")", ")", "for", "filename", "in", "...	39.4	14.866667
def _raise_rpc_timeout_error(self, uuid): """Gather information and raise an Rpc exception. :param str uuid: Rpc Identifier. :return: """ requests = [] for key, value in self._request.items(): if value == uuid: requests.append(key) sel...	[ "def", "_raise_rpc_timeout_error", "(", "self", ",", "uuid", ")", ":", "requests", "=", "[", "]", "for", "key", ",", "value", "in", "self", ".", "_request", ".", "items", "(", ")", ":", "if", "value", "==", "uuid", ":", "requests", ".", "append", "("...	27.526316	13.842105
def hill_climbing_stochastic(problem, iterations_limit=0, viewer=None): ''' Stochastic hill climbing. If iterations_limit is specified, the algorithm will end after that number of iterations. Else, it will continue until it can't find a better node than the current one. Requires: SearchProblem....	[ "def", "hill_climbing_stochastic", "(", "problem", ",", "iterations_limit", "=", "0", ",", "viewer", "=", "None", ")", ":", "return", "_local_search", "(", "problem", ",", "_random_best_expander", ",", "iterations_limit", "=", "iterations_limit", ",", "fringe_size",...	41.25	19.375
def update(self, current, values=[], exact=[], strict=[]): """ Updates the progress bar. # Arguments current: Index of current step. values: List of tuples (name, value_for_last_step). The progress bar will display averages for these values. ex...	[ "def", "update", "(", "self", ",", "current", ",", "values", "=", "[", "]", ",", "exact", "=", "[", "]", ",", "strict", "=", "[", "]", ")", ":", "for", "k", ",", "v", "in", "values", ":", "if", "k", "not", "in", "self", ".", "sum_values", ":"...	38.573034	17.516854
def encode(args, *kwargs): """ A helper function to encode an element. @param args: The python data to be encoded. @kwarg encoding: AMF encoding type. One of L{ENCODING_TYPES}. @return: A L{util.BufferedByteStream} object that contains the data. """ encoding = kwargs.pop('encoding', DEFAU...	[ "def", "encode", "(", "", "args", ",", "", "", "kwargs", ")", ":", "encoding", "=", "kwargs", ".", "pop", "(", "'encoding'", ",", "DEFAULT_ENCODING", ")", "encoder", "=", "get_encoder", "(", "encoding", ",", "", "*", "kwargs", ")", "[", "encoder", ...	28	18.941176
def detect_palette_support(basic_palette=None): ''' Returns whether we think the terminal supports basic, extended, or truecolor. None if not able to tell. Returns: None or str: 'basic', 'extended', 'truecolor' ''' result = col_init = win_enabled = None TERM = env.TERM or '...	[ "def", "detect_palette_support", "(", "basic_palette", "=", "None", ")", ":", "result", "=", "col_init", "=", "win_enabled", "=", "None", "TERM", "=", "env", ".", "TERM", "or", "''", "if", "os_name", "==", "'nt'", ":", "from", ".", "windows", "import", "...	34.431818	21.159091
def after_func_accept_retry_state(fn): """Wrap "after" function to accept "retry_state".""" if not six.callable(fn): return fn if func_takes_retry_state(fn): return fn @_utils.wraps(fn) def wrapped_after_sleep_func(retry_state): # func, trial_number, trial_time_taken ...	[ "def", "after_func_accept_retry_state", "(", "fn", ")", ":", "if", "not", "six", ".", "callable", "(", "fn", ")", ":", "return", "fn", "if", "func_takes_retry_state", "(", "fn", ")", ":", "return", "fn", "@", "_utils", ".", "wraps", "(", "fn", ")", "de...	31.705882	15
def _combine_costs(self, Npwl, Hpwl, Cpwl, fparm_pwl, any_pwl, Npol, Hpol, Cpol, fparm_pol, npol, nw): """ Combines pwl, polynomial and user-defined costs. """ NN = vstack([n for n in [Npwl, Npol] if n is not None], "csr") if (Hpwl is not None) and (Hpol is not No...	[ "def", "_combine_costs", "(", "self", ",", "Npwl", ",", "Hpwl", ",", "Cpwl", ",", "fparm_pwl", ",", "any_pwl", ",", "Npol", ",", "Hpol", ",", "Cpol", ",", "fparm_pol", ",", "npol", ",", "nw", ")", ":", "NN", "=", "vstack", "(", "[", "n", "for", "...	37	21.789474
def dump(self): """Saves state database.""" assert self.database is not None cmd = "SELECT count from {} WHERE rowid={}" self._execute(cmd.format(self.STATE_INFO_TABLE, self.STATE_INFO_ROW)) ret = self._fetchall() assert len(ret) == 1 assert len(ret[0]) == 1 ...	[ "def", "dump", "(", "self", ")", ":", "assert", "self", ".", "database", "is", "not", "None", "cmd", "=", "\"SELECT count from {} WHERE rowid={}\"", "self", ".", "_execute", "(", "cmd", ".", "format", "(", "self", ".", "STATE_INFO_TABLE", ",", "self", ".", ...	30.423077	18.980769
def send_last_message(self, msg, connection_id=None): """ Should be used instead of send_message, when you want to close the connection once the message is sent. :param msg: protobuf validator_pb2.Message """ zmq_identity = None if connection_id is not None and s...	[ "def", "send_last_message", "(", "self", ",", "msg", ",", "connection_id", "=", "None", ")", ":", "zmq_identity", "=", "None", "if", "connection_id", "is", "not", "None", "and", "self", ".", "_connections", "is", "not", "None", ":", "if", "connection_id", ...	38.258065	19.419355
def create_strategy(name=None): """ Create a strategy, or just returns it if it's already one. :param name: :return: Strategy """ import logging from bonobo.execution.strategies.base import Strategy if isinstance(name, Strategy): return name if name is None: name ...	[ "def", "create_strategy", "(", "name", "=", "None", ")", ":", "import", "logging", "from", "bonobo", ".", "execution", ".", "strategies", ".", "base", "import", "Strategy", "if", "isinstance", "(", "name", ",", "Strategy", ")", ":", "return", "name", "if",...	24.653846	23.730769
def deserialize(self, obj=None, ignore_non_existing=False): """ :type obj dict\|None :type ignore_non_existing bool """ if not isinstance(obj, dict): if ignore_non_existing: return raise TypeError("Wrong data '{}' passed for '{}' deserialization".format(obj, self.__class__.__name...	[ "def", "deserialize", "(", "self", ",", "obj", "=", "None", ",", "ignore_non_existing", "=", "False", ")", ":", "if", "not", "isinstance", "(", "obj", ",", "dict", ")", ":", "if", "ignore_non_existing", ":", "return", "raise", "TypeError", "(", "\"Wrong da...	37.5	25.462963
def parse_eff(filename): """ Parse through Jean-Marcs OSSSO .eff files. The efficiency files comes in 'chunks' meant to be used at different 'rates' of motion. """ blocks = [] block = {} with open(filename) as efile: for line in efile.readlines(): if line.lstrip()....	[ "def", "parse_eff", "(", "filename", ")", ":", "blocks", "=", "[", "]", "block", "=", "{", "}", "with", "open", "(", "filename", ")", "as", "efile", ":", "for", "line", "in", "efile", ".", "readlines", "(", ")", ":", "if", "line", ".", "lstrip", ...	28.913043	17.608696
def getExtensions(self): """returns objects for all map service extensions""" extensions = [] if isinstance(self.supportedExtensions, list): for ext in self.supportedExtensions: extensionURL = self._url + "/exts/%s" % ext if ext == "SchematicsServer": ...	[ "def", "getExtensions", "(", "self", ")", ":", "extensions", "=", "[", "]", "if", "isinstance", "(", "self", ".", "supportedExtensions", ",", "list", ")", ":", "for", "ext", "in", "self", ".", "supportedExtensions", ":", "extensionURL", "=", "self", ".", ...	58.7	25.9
def draw_line(self, lx, ltor): '''Draw a series of elements from left to right''' tag = self.get_tag() c = self.canvas s = self.style sep = s.h_sep exx = 0 exy = 0 terms = lx if ltor else reversed(lx) # Reverse so we can draw left to right for term in terms: t, texx,...	[ "def", "draw_line", "(", "self", ",", "lx", ",", "ltor", ")", ":", "tag", "=", "self", ".", "get_tag", "(", ")", "c", "=", "self", ".", "canvas", "s", "=", "self", ".", "style", "sep", "=", "s", ".", "h_sep", "exx", "=", "0", "exy", "=", "0",...	34.657143	24.2
def ext_from_filename(filename): """ Scan a filename for it's extension. :param filename: string of the filename :return: the extension off the end (empty string if it can't find one) """ try: base, ext = filename.lower().rsplit(".", 1) except ValueError: return '' ext = ".{...	[ "def", "ext_from_filename", "(", "filename", ")", ":", "try", ":", "base", ",", "ext", "=", "filename", ".", "lower", "(", ")", ".", "rsplit", "(", "\".\"", ",", "1", ")", "except", "ValueError", ":", "return", "''", "ext", "=", "\".{0}\"", ".", "for...	31.95	16.75
def label_position(self): ''' Find the largest region and position the label in that. ''' reg_sizes = [(r.size(), r) for r in self.pieces] reg_sizes.sort() return reg_sizes[-1][1].label_position()	[ "def", "label_position", "(", "self", ")", ":", "reg_sizes", "=", "[", "(", "r", ".", "size", "(", ")", ",", "r", ")", "for", "r", "in", "self", ".", "pieces", "]", "reg_sizes", ".", "sort", "(", ")", "return", "reg_sizes", "[", "-", "1", "]", ...	34	19.428571
def unpack(cls, msg, client, server, _): """Parse message and return an `OpKillCursors`. Takes the client message as bytes, the client and server socket objects, and the client request id. """ # Leading 4 bytes are reserved. num_of_cursor_ids, = _UNPACK_INT(msg[4:8]) ...	[ "def", "unpack", "(", "cls", ",", "msg", ",", "client", ",", "server", ",", "_", ")", ":", "# Leading 4 bytes are reserved.", "num_of_cursor_ids", ",", "=", "_UNPACK_INT", "(", "msg", "[", "4", ":", "8", "]", ")", "cursor_ids", "=", "[", "]", "pos", "=...	38.866667	14.333333
async def _seek(self, ctx, *, time: str): """ Seeks to a given position in a track. """ player = self.bot.lavalink.players.get(ctx.guild.id) if not player.is_playing: return await ctx.send('Not playing.') seconds = time_rx.search(time) if not seconds: ...	[ "async", "def", "_seek", "(", "self", ",", "ctx", ",", "*", ",", "time", ":", "str", ")", ":", "player", "=", "self", ".", "bot", ".", "lavalink", ".", "players", ".", "get", "(", "ctx", ".", "guild", ".", "id", ")", "if", "not", "player", ".",...	35.421053	20.052632
def _add_warc_action_log(self, path, url): '''Add the action log to the WARC file.''' _logger.debug('Adding action log record.') actions = [] with open(path, 'r', encoding='utf-8', errors='replace') as file: for line in file: actions.append(json.loads(line)) ...	[ "def", "_add_warc_action_log", "(", "self", ",", "path", ",", "url", ")", ":", "_logger", ".", "debug", "(", "'Adding action log record.'", ")", "actions", "=", "[", "]", "with", "open", "(", "path", ",", "'r'", ",", "encoding", "=", "'utf-8'", ",", "err...	38.181818	20.181818
def create_bucket(self, bucket_name, region_name=None): """ Creates an Amazon S3 bucket. :param bucket_name: The name of the bucket :type bucket_name: str :param region_name: The name of the aws region in which to create the bucket. :type region_name: str """ ...	[ "def", "create_bucket", "(", "self", ",", "bucket_name", ",", "region_name", "=", "None", ")", ":", "s3_conn", "=", "self", ".", "get_conn", "(", ")", "if", "not", "region_name", ":", "region_name", "=", "s3_conn", ".", "meta", ".", "region_name", "if", ...	41.210526	16.157895
def _get_local_ip(self): """Try to determine the local IP address of the machine.""" try: sock = socket.socket(socket.AF_INET, socket.SOCK_DGRAM) # Use Google Public DNS server to determine own IP sock.connect(('8.8.8.8', 80)) return sock.getsockname()[0...	[ "def", "_get_local_ip", "(", "self", ")", ":", "try", ":", "sock", "=", "socket", ".", "socket", "(", "socket", ".", "AF_INET", ",", "socket", ".", "SOCK_DGRAM", ")", "# Use Google Public DNS server to determine own IP", "sock", ".", "connect", "(", "(", "'8.8...	33.1875	17.875
def reset(self): """Resets the sampler to its initial state Note ---- This will destroy the label cache and history of estimates. """ self._TP = np.zeros(self._n_class) self._FP = np.zeros(self._n_class) self._FN = np.zeros(self._n_class) self._TN...	[ "def", "reset", "(", "self", ")", ":", "self", ".", "_TP", "=", "np", ".", "zeros", "(", "self", ".", "_n_class", ")", "self", ".", "_FP", "=", "np", ".", "zeros", "(", "self", ".", "_n_class", ")", "self", ".", "_FN", "=", "np", ".", "zeros", ...	36.866667	16.933333
def _get_model_reference(self, model_id): """Constructs a ModelReference. Args: model_id (str): the ID of the model. Returns: google.cloud.bigquery.model.ModelReference: A ModelReference for a model in this dataset. """ return ModelReference.from_api_repr( {"pro...	[ "def", "_get_model_reference", "(", "self", ",", "model_id", ")", ":", "return", "ModelReference", ".", "from_api_repr", "(", "{", "\"projectId\"", ":", "self", ".", "project", ",", "\"datasetId\"", ":", "self", ".", "dataset_id", ",", "\"modelId\"", ":", "mod...	29.769231	19.461538
def last_seen(self): """Return mattress last seen time.""" """ These values seem to be rarely updated correctly in the API. Don't expect accurate results from this property. """ try: if self.side == 'left': lastseen = self.device.device_data['l...	[ "def", "last_seen", "(", "self", ")", ":", "\"\"\"\n These values seem to be rarely updated correctly in the API.\n Don't expect accurate results from this property.\n \"\"\"", "try", ":", "if", "self", ".", "side", "==", "'left'", ":", "lastseen", "=", "self...	35.941176	16
def lock(self, name, timeout=None, sleep=0.1): """ Return a new Lock object using key ``name`` that mimics the behavior of threading.Lock. If specified, ``timeout`` indicates a maximum life for the lock. By default, it will remain locked until release() is called. ``sle...	[ "def", "lock", "(", "self", ",", "name", ",", "timeout", "=", "None", ",", "sleep", "=", "0.1", ")", ":", "return", "Lock", "(", "self", ",", "name", ",", "timeout", "=", "timeout", ",", "sleep", "=", "sleep", ")" ]	41.769231	21
def _copy(query_dict): """ Return a mutable copy of `query_dict`. This is a workaround to Django bug #13572, which prevents QueryDict.copy from working. """ memo = { } result = query_dict.__class__('', encoding=query_dict.encoding, mutable=True) memo[id(query_dict)] = resu...	[ "def", "_copy", "(", "query_dict", ")", ":", "memo", "=", "{", "}", "result", "=", "query_dict", ".", "__class__", "(", "''", ",", "encoding", "=", "query_dict", ".", "encoding", ",", "mutable", "=", "True", ")", "memo", "[", "id", "(", "query_dict", ...	24	18.4
def split_at_single(text, sep, not_before=[], not_after=[]): """Works like text.split(sep) but separated fragments cant end with not_before or start with not_after""" n = 0 lt, s = len(text), len(sep) last = 0 while n < lt: if not s + n > lt: if sep == text[n:n + s]: ...	[ "def", "split_at_single", "(", "text", ",", "sep", ",", "not_before", "=", "[", "]", ",", "not_after", "=", "[", "]", ")", ":", "n", "=", "0", "lt", ",", "s", "=", "len", "(", "text", ")", ",", "len", "(", "sep", ")", "last", "=", "0", "while...	34.105263	16.105263
def reorderMAT(m, H=5000, cost='line'): ''' This function reorders the connectivity matrix in order to place more edges closer to the diagonal. This often helps in displaying community structure, clusters, etc. Parameters ---------- MAT : NxN np.ndarray connection matrix H : int...	[ "def", "reorderMAT", "(", "m", ",", "H", "=", "5000", ",", "cost", "=", "'line'", ")", ":", "from", "scipy", "import", "linalg", ",", "stats", "m", "=", "m", ".", "copy", "(", ")", "n", "=", "len", "(", "m", ")", "np", ".", "fill_diagonal", "("...	29.861111	19.833333
def equivalence_transform(compound, from_positions, to_positions, add_bond=True): """Computes an affine transformation that maps the from_positions to the respective to_positions, and applies this transformation to the compound. Parameters ---------- compound : mb.Compound The Compound to b...	[ "def", "equivalence_transform", "(", "compound", ",", "from_positions", ",", "to_positions", ",", "add_bond", "=", "True", ")", ":", "warn", "(", "'The `equivalence_transform` function is being phased out in favor of'", "' `force_overlap`.'", ",", "DeprecationWarning", ")", ...	44.731707	24.804878
def delete(self, key): """Adds deletion of the entity with given key to the mutation buffer. If mutation buffer reaches its capacity then this method commit all pending mutations from the buffer and emties it. Args: key: key of the entity which should be deleted """ self._cur_batch.delet...	[ "def", "delete", "(", "self", ",", "key", ")", ":", "self", ".", "_cur_batch", ".", "delete", "(", "key", ")", "self", ".", "_num_mutations", "+=", "1", "if", "self", ".", "_num_mutations", ">=", "MAX_MUTATIONS_IN_BATCH", ":", "self", ".", "commit", "(",...	31.071429	18.642857
def _convert_a_header_to_a_h2_header(self, hdr_name, hdr_value, is_sensitive, should_index): # noqa: E501 # type: (str, str, Callable[[str, str], bool], Callable[[str], bool]) -> Tuple[HPackHeaders, int] # noqa: E501 """ _convert_a_header_to_a_h2_header builds a HPackHeaders from a header name...	[ "def", "_convert_a_header_to_a_h2_header", "(", "self", ",", "hdr_name", ",", "hdr_value", ",", "is_sensitive", ",", "should_index", ")", ":", "# noqa: E501", "# type: (str, str, Callable[[str, str], bool], Callable[[str], bool]) -> Tuple[HPackHeaders, int] # noqa: E501", "# If both...	37.297872	18.244681
def arg_to_json(arg): """ Perform necessary JSON conversion on the arg. """ conversion = json_conversions.get(type(arg)) if conversion: return conversion(arg) for type_ in subclass_conversions: if isinstance(arg, type_): return json_conversions[type_](arg) return ...	[ "def", "arg_to_json", "(", "arg", ")", ":", "conversion", "=", "json_conversions", ".", "get", "(", "type", "(", "arg", ")", ")", "if", "conversion", ":", "return", "conversion", "(", "arg", ")", "for", "type_", "in", "subclass_conversions", ":", "if", "...	30.545455	7.818182
def get_report(host, userid, password, port=443, auth_method='basic', client_timeout=60): """get iRMC report This function returns iRMC report in XML format :param host: hostname or IP of iRMC :param userid: userid for iRMC with administrator privileges :param password: password for ...	[ "def", "get_report", "(", "host", ",", "userid", ",", "password", ",", "port", "=", "443", ",", "auth_method", "=", "'basic'", ",", "client_timeout", "=", "60", ")", ":", "auth_obj", "=", "None", "try", ":", "protocol", "=", "{", "80", ":", "'http'", ...	34.921569	16.392157
def action_edit_save(self, courseid, taskid, path, content): """ Save an edited file """ wanted_path = self.verify_path(courseid, taskid, path) if wanted_path is None: return json.dumps({"error": True}) try: self.task_factory.get_task_fs(courseid, taskid).put(want...	[ "def", "action_edit_save", "(", "self", ",", "courseid", ",", "taskid", ",", "path", ",", "content", ")", ":", "wanted_path", "=", "self", ".", "verify_path", "(", "courseid", ",", "taskid", ",", "path", ")", "if", "wanted_path", "is", "None", ":", "retu...	45.1	18
def handle_lock_expired( payment_state: InitiatorPaymentState, state_change: ReceiveLockExpired, channelidentifiers_to_channels: ChannelMap, block_number: BlockNumber, ) -> TransitionResult[InitiatorPaymentState]: """Initiator also needs to handle LockExpired messages when refund tra...	[ "def", "handle_lock_expired", "(", "payment_state", ":", "InitiatorPaymentState", ",", "state_change", ":", "ReceiveLockExpired", ",", "channelidentifiers_to_channels", ":", "ChannelMap", ",", "block_number", ":", "BlockNumber", ",", ")", "->", "TransitionResult", "[", ...	38.76087	19.652174
def WriteFileHash(self, path, hash_value): """Writes the file path and hash to file. Args: path (str): path of the file. hash_value (str): message digest hash calculated over the file data. """ string = '{0:s}\t{1:s}\n'.format(hash_value, path) encoded_string = self._EncodeString(strin...	[ "def", "WriteFileHash", "(", "self", ",", "path", ",", "hash_value", ")", ":", "string", "=", "'{0:s}\\t{1:s}\\n'", ".", "format", "(", "hash_value", ",", "path", ")", "encoded_string", "=", "self", ".", "_EncodeString", "(", "string", ")", "self", ".", "_...	32.363636	16
def _cosine(a, b): """ Return the len(a & b) / len(a) """ return 1. * len(a & b) / (math.sqrt(len(a)) * math.sqrt(len(b)))	[ "def", "_cosine", "(", "a", ",", "b", ")", ":", "return", "1.", "", "len", "(", "a", "&", "b", ")", "/", "(", "math", ".", "sqrt", "(", "len", "(", "a", ")", ")", "", "math", ".", "sqrt", "(", "len", "(", "b", ")", ")", ")" ]	42.666667	16.666667
def list_events(self, source=None, severity=None, text_filter=None, start=None, stop=None, page_size=500, descending=False): """ Reads events between the specified start and stop time. Events are sorted by generation time, source, then sequence number. :param str so...	[ "def", "list_events", "(", "self", ",", "source", "=", "None", ",", "severity", "=", "None", ",", "text_filter", "=", "None", ",", "start", "=", "None", ",", "stop", "=", "None", ",", "page_size", "=", "500", ",", "descending", "=", "False", ")", ":"...	45.477273	20.931818
def flatten(lst): """Flatten list. Args: lst (list): List to flatten Returns: generator """ for elm in lst: if isinstance(elm, collections.Iterable) and not isinstance( elm, string_types): for sub in flatten(elm): yield sub ...	[ "def", "flatten", "(", "lst", ")", ":", "for", "elm", "in", "lst", ":", "if", "isinstance", "(", "elm", ",", "collections", ".", "Iterable", ")", "and", "not", "isinstance", "(", "elm", ",", "string_types", ")", ":", "for", "sub", "in", "flatten", "(...	23.857143	16.357143
def recent_activity(self, user_id): """Recent activity (actions) for a given user""" M = models # noqa if request.args.get('limit'): limit = int(request.args.get('limit')) else: limit = 1000 qry = ( db.session.query(M.Log, M.Dashboard, M.Sli...	[ "def", "recent_activity", "(", "self", ",", "user_id", ")", ":", "M", "=", "models", "# noqa", "if", "request", ".", "args", ".", "get", "(", "'limit'", ")", ":", "limit", "=", "int", "(", "request", ".", "args", ".", "get", "(", "'limit'", ")", ")...	30.957447	15.723404
def log_path(cls, project, log): """Return a fully-qualified log string.""" return google.api_core.path_template.expand( "projects/{project}/logs/{log}", project=project, log=log )	[ "def", "log_path", "(", "cls", ",", "project", ",", "log", ")", ":", "return", "google", ".", "api_core", ".", "path_template", ".", "expand", "(", "\"projects/{project}/logs/{log}\"", ",", "project", "=", "project", ",", "log", "=", "log", ")" ]	42.4	16
def centers_std(self): """The standardized centers for the kmeans model.""" o = self._model_json["output"] cvals = o["centers_std"].cell_values centers_std = [list(cval[1:]) for cval in cvals] centers_std = [list(x) for x in zip(*centers_std)] return centers_std	[ "def", "centers_std", "(", "self", ")", ":", "o", "=", "self", ".", "_model_json", "[", "\"output\"", "]", "cvals", "=", "o", "[", "\"centers_std\"", "]", ".", "cell_values", "centers_std", "=", "[", "list", "(", "cval", "[", "1", ":", "]", ")", "for...	43.428571	10.285714
def create_deamon(cmd, shell=False, root=False): """Usage: Create servcice process. """ try: if root: cmd.insert(0, 'sudo') LOG.info(cmd) subproc = subprocess.Popen(cmd, shell=shell, stdout=subprocess.PIPE, stderr=subprocess.PIPE...	[ "def", "create_deamon", "(", "cmd", ",", "shell", "=", "False", ",", "root", "=", "False", ")", ":", "try", ":", "if", "root", ":", "cmd", ".", "insert", "(", "0", ",", "'sudo'", ")", "LOG", ".", "info", "(", "cmd", ")", "subproc", "=", "subproce...	28.357143	16.214286
def language(s): """ Returns a (language, confidence)-tuple for the given string. """ s = decode_utf8(s) s = set(w.strip(PUNCTUATION) for w in s.replace("'", "' ").split()) n = float(len(s) or 1) p = {} for xx in LANGUAGES: lexicon = _module(xx).__dict__["lexicon"] p[xx] = su...	[ "def", "language", "(", "s", ")", ":", "s", "=", "decode_utf8", "(", "s", ")", "s", "=", "set", "(", "w", ".", "strip", "(", "PUNCTUATION", ")", "for", "w", "in", "s", ".", "replace", "(", "\"'\"", ",", "\"' \"", ")", ".", "split", "(", ")", ...	37.727273	16.727273
def create_user(email, password, active, confirmed_at, send_email): """ Create a new user. """ if confirmed_at == 'now': confirmed_at = security.datetime_factory() user = user_manager.create(email=email, password=password, active=active, confirmed_at=confirmed_...	[ "def", "create_user", "(", "email", ",", "password", ",", "active", ",", "confirmed_at", ",", "send_email", ")", ":", "if", "confirmed_at", "==", "'now'", ":", "confirmed_at", "=", "security", ".", "datetime_factory", "(", ")", "user", "=", "user_manager", "...	43.285714	17.714286
def hook_inform(self, inform_name, callback): """Hookup a function to be called when an inform is received. Useful for interface-changed and sensor-status informs. Parameters ---------- inform_name : str The name of the inform. callback : function ...	[ "def", "hook_inform", "(", "self", ",", "inform_name", ",", "callback", ")", ":", "# Do not hook the same callback multiple times", "if", "callback", "not", "in", "self", ".", "_inform_hooks", "[", "inform_name", "]", ":", "self", ".", "_inform_hooks", "[", "infor...	32.625	17.5
def enthalpy_Cpg_Hvap(self): r'''Method to calculate the enthalpy of an ideal mixture (no pressure effects). This routine is based on "route A", where only the gas heat capacity and enthalpy of vaporization are used. The reference temperature is a property of the class; it defau...	[ "def", "enthalpy_Cpg_Hvap", "(", "self", ")", ":", "H", "=", "0", "T", "=", "self", ".", "T", "if", "self", ".", "phase", "==", "'g'", ":", "for", "i", "in", "self", ".", "cmps", ":", "H", "+=", "self", ".", "zs", "[", "i", "]", "*", "self", ...	41.672414	26.465517
def coerce(self, value): """Convert text values into integer values. Args: value (str or int): The value to coerce. Raises: TypeError: If the value is not an int or string. ValueError: If the value is not int or an acceptable value. Return...	[ "def", "coerce", "(", "self", ",", "value", ")", ":", "if", "isinstance", "(", "value", ",", "int", ")", "or", "isinstance", "(", "value", ",", "compat", ".", "long", ")", ":", "return", "value", "return", "int", "(", "value", ")" ]	27.444444	23.111111
def load(self, filepath): """Load configuration from existing file. :param str filepath: Path to existing config file. :raises: ValueError if supplied config file is invalid. """ try: self._config.read(filepath) self.long_running_operation_timeout = self....	[ "def", "load", "(", "self", ",", "filepath", ")", ":", "try", ":", "self", ".", "_config", ".", "read", "(", "filepath", ")", "self", ".", "long_running_operation_timeout", "=", "self", ".", "_config", ".", "getint", "(", "\"Azure\"", ",", "\"long_running_...	41.0625	16.8125
def update_pulled_fields(instance, imported_instance, fields): """ Update instance fields based on imported from backend data. Save changes to DB only one or more fields were changed. """ modified = False for field in fields: pulled_value = getattr(imported_instance, field) curre...	[ "def", "update_pulled_fields", "(", "instance", ",", "imported_instance", ",", "fields", ")", ":", "modified", "=", "False", "for", "field", "in", "fields", ":", "pulled_value", "=", "getattr", "(", "imported_instance", ",", "field", ")", "current_value", "=", ...	47.75	21.75
def _Close(self): """Closes the file-like object. If the file-like object was passed in the init function the file object-based file-like object does not control the file-like object and should not actually close it. """ if not self._file_object_set_in_init: try: # TODO: fix close...	[ "def", "_Close", "(", "self", ")", ":", "if", "not", "self", ".", "_file_object_set_in_init", ":", "try", ":", "# TODO: fix close being called for the same object multiple times.", "self", ".", "_file_object", ".", "close", "(", ")", "except", "IOError", ":", "pass"...	32.571429	18.142857
def add_optional_arg_param(self, param_name, layer_index, blob_index): """Add an arg param. If there is no such param in .caffemodel fie, silently ignore it.""" blobs = self.layers[layer_index].blobs if blob_index < len(blobs): self.add_arg_param(param_name, layer_index, blob_index)	[ "def", "add_optional_arg_param", "(", "self", ",", "param_name", ",", "layer_index", ",", "blob_index", ")", ":", "blobs", "=", "self", ".", "layers", "[", "layer_index", "]", ".", "blobs", "if", "blob_index", "<", "len", "(", "blobs", ")", ":", "self", ...	63	13.6
def load_plugins(classprefix, plugin_list): """ loads the plugins specified in the list :param classprefix: the class prefix :param plugin_list: the list of plugins """ # classprefix "cmd3.plugins." plugins = [] import_object = {} # log.info(str(list)) for plugin in plugin_list: ...	[ "def", "load_plugins", "(", "classprefix", ",", "plugin_list", ")", ":", "# classprefix \"cmd3.plugins.\"", "plugins", "=", "[", "]", "import_object", "=", "{", "}", "# log.info(str(list))", "for", "plugin", "in", "plugin_list", ":", "if", "cygwin", ":", "plugin",...	34.914286	14.4
def create_oracle(username, password, host, port, database, kwargs): # pragma: no cover """ create an engine connected to a oracle database using cx_oracle. """ return create_engine( _create_oracle(username, password, host, port, database), kwargs )	[ "def", "create_oracle", "(", "username", ",", "password", ",", "host", ",", "port", ",", "database", ",", "", "", "kwargs", ")", ":", "# pragma: no cover", "return", "create_engine", "(", "_create_oracle", "(", "username", ",", "password", ",", "host", ","...	35.375	22.125
def call(self, name, args, kwargs): """Make a SoftLayer API call :param service: the name of the SoftLayer API service :param method: the method to call on the service :param \\args: same optional arguments that ``BaseClient.call`` takes :param \\\\kwargs: same optional ke...	[ "def", "call", "(", "self", ",", "name", ",", "", "args", ",", "", "", "kwargs", ")", ":", "return", "self", ".", "client", ".", "call", "(", "self", ".", "name", ",", "name", ",", "", "args", ",", "", "", "kwargs", ")" ]	37.684211	22.473684
def IV(abf,T1,T2,plotToo=True,color='b'): """ Given two time points (seconds) return IV data. Optionally plots a fancy graph (with errorbars) Returns [[AV],[SD]] for the given range. """ rangeData=abf.average_data([[T1,T2]]) #get the average data per sweep AV,SD=rangeData[:,0,0],rangeData[:,...	[ "def", "IV", "(", "abf", ",", "T1", ",", "T2", ",", "plotToo", "=", "True", ",", "color", "=", "'b'", ")", ":", "rangeData", "=", "abf", ".", "average_data", "(", "[", "[", "T1", ",", "T2", "]", "]", ")", "#get the average data per sweep", "AV", ",...	38.912281	16.912281
def add_filter(self, name, filter_values): """ Add a filter for a facet. """ # normalize the value into a list if not isinstance(filter_values, (tuple, list)): if filter_values is None: return filter_values = [filter_values, ] # re...	[ "def", "add_filter", "(", "self", ",", "name", ",", "filter_values", ")", ":", "# normalize the value into a list", "if", "not", "isinstance", "(", "filter_values", ",", "(", "tuple", ",", "list", ")", ")", ":", "if", "filter_values", "is", "None", ":", "ret...	30.157895	14.157895
def _listen(self): """Listen for messages passed from parent This method distributes messages received via stdin to their corresponding channel. Based on the format of the incoming message, the message is forwarded to its corresponding channel to be processed by its correspondin...	[ "def", "_listen", "(", "self", ")", ":", "def", "_listen", "(", ")", ":", "\"\"\"This runs in a thread\"\"\"", "for", "line", "in", "iter", "(", "sys", ".", "stdin", ".", "readline", ",", "b\"\"", ")", ":", "try", ":", "response", "=", "json", ".", "lo...	38.534884	22.232558
def replace(self, left=None, lower=None, upper=None, right=None, ignore_inf=True): """ Create a new interval based on the current one and the provided values. Callable can be passed instead of values. In that case, it is called with the current corresponding value except if ignore_inf i...	[ "def", "replace", "(", "self", ",", "left", "=", "None", ",", "lower", "=", "None", ",", "upper", "=", "None", ",", "right", "=", "None", ",", "ignore_inf", "=", "True", ")", ":", "if", "callable", "(", "left", ")", ":", "left", "=", "left", "(",...	40.777778	25.833333
def check_cgroup_availability_in_thread(options): """ Run check_cgroup_availability() in a separate thread to detect the following problem: If "cgexec --sticky" is used to tell cgrulesengd to not interfere with our child processes, the sticky flag unfortunately works only for processes spawned by th...	[ "def", "check_cgroup_availability_in_thread", "(", "options", ")", ":", "thread", "=", "_CheckCgroupsThread", "(", "options", ")", "thread", ".", "start", "(", ")", "thread", ".", "join", "(", ")", "if", "thread", ".", "error", ":", "raise", "thread", ".", ...	42	19.230769
def _set_logging( logger_name="colin", level=logging.INFO, handler_class=logging.StreamHandler, handler_kwargs=None, format='%(asctime)s.%(msecs).03d %(filename)-17s %(levelname)-6s %(message)s', date_format='%H:%M:%S'): """ Set personal logger for this library. ...	[ "def", "_set_logging", "(", "logger_name", "=", "\"colin\"", ",", "level", "=", "logging", ".", "INFO", ",", "handler_class", "=", "logging", ".", "StreamHandler", ",", "handler_kwargs", "=", "None", ",", "format", "=", "'%(asctime)s.%(msecs).03d %(filename)-17s %(l...	40.966667	17.433333
def setup(self): """ Create mask list. Consists of all tuples between which this filter accepts lines. """ # get start and end of the mask and set a start_limit if not self.mask_source.start: raise SystemExit("Can't parse format of %s. Is this a log file or "...	[ "def", "setup", "(", "self", ")", ":", "# get start and end of the mask and set a start_limit", "if", "not", "self", ".", "mask_source", ".", "start", ":", "raise", "SystemExit", "(", "\"Can't parse format of %s. Is this a log file or \"", "\"system.profile collection?\"", "%...	38.263158	22.052632
def _attrs_to_init_script( attrs, frozen, slots, post_init, cache_hash, base_attr_map, is_exc ): """ Return a script of an initializer for attrs and a dict of globals. The globals are expected by the generated script. If frozen is True, we cannot set the attributes directly so we use a cac...	[ "def", "_attrs_to_init_script", "(", "attrs", ",", "frozen", ",", "slots", ",", "post_init", ",", "cache_hash", ",", "base_attr_map", ",", "is_exc", ")", ":", "lines", "=", "[", "]", "any_slot_ancestors", "=", "any", "(", "_is_slot_attr", "(", "a", ".", "n...	37.776978	19.133094
def CountHuntLogEntries(self, hunt_id, cursor=None): """Returns number of hunt log entries of a given hunt.""" hunt_id_int = db_utils.HuntIDToInt(hunt_id) query = ("SELECT COUNT(*) FROM flow_log_entries " "FORCE INDEX(flow_log_entries_by_hunt) " "WHERE hunt_id = %s AND flow_id = h...	[ "def", "CountHuntLogEntries", "(", "self", ",", "hunt_id", ",", "cursor", "=", "None", ")", ":", "hunt_id_int", "=", "db_utils", ".", "HuntIDToInt", "(", "hunt_id", ")", "query", "=", "(", "\"SELECT COUNT(*) FROM flow_log_entries \"", "\"FORCE INDEX(flow_log_entries_b...	43.666667	12.222222
def check_array(array, args, *kwargs): """Validate inputs Parameters ---------- accept_dask_array : bool, default True accept_dask_dataframe : bool, default False accept_unknown_chunks : bool, default False For dask Arrays, whether to allow the `.chunks` attribute to contain a...	[ "def", "check_array", "(", "array", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "accept_dask_array", "=", "kwargs", ".", "pop", "(", "\"accept_dask_array\"", ",", "True", ")", "preserve_pandas_dataframe", "=", "kwargs", ".", "pop", "(", "\"preserve_...	36.125	20.027778
def _pigpio_aio_command(self, cmd, p1, p2,): """ Runs a pigpio socket command. sl:= command socket and lock. cmd:= the command to be executed. p1:= command parameter 1 (if applicable). p2:= command parameter 2 (if applicable). """ with (yield from self...	[ "def", "_pigpio_aio_command", "(", "self", ",", "cmd", ",", "p1", ",", "p2", ",", ")", ":", "with", "(", "yield", "from", "self", ".", "_lock", ")", ":", "data", "=", "struct", ".", "pack", "(", "'IIII'", ",", "cmd", ",", "p1", ",", "p2", ",", ...	37.466667	10.266667
def from_json(cls, raw): """Helper to construct a blob from a dict. Args: raw (dict): Raw blob representation. Returns: NodeBlob: A NodeBlob object or None. """ if raw is None: return None bcls = None _type = raw.get('type') ...	[ "def", "from_json", "(", "cls", ",", "raw", ")", ":", "if", "raw", "is", "None", ":", "return", "None", "bcls", "=", "None", "_type", "=", "raw", ".", "get", "(", "'type'", ")", "try", ":", "bcls", "=", "cls", ".", "_blob_type_map", "[", "BlobType"...	26.84	20.64
def annual_return(returns, period=DAILY, annualization=None): """ Determines the mean annual growth rate of returns. This is equivilent to the compound annual growth rate. Parameters ---------- returns : pd.Series or np.ndarray Periodic returns of the strategy, noncumulative. - ...	[ "def", "annual_return", "(", "returns", ",", "period", "=", "DAILY", ",", "annualization", "=", "None", ")", ":", "if", "len", "(", "returns", ")", "<", "1", ":", "return", "np", ".", "nan", "ann_factor", "=", "annualization_factor", "(", "period", ",", ...	31.65	22.95
def version_to_write(self, found): # type: (str) -> Version """ Take 1st version string found. :param found: possible version string :return: """ first = False if self.version is None: first = True try: self.current_version...	[ "def", "version_to_write", "(", "self", ",", "found", ")", ":", "# type: (str) -> Version", "first", "=", "False", "if", "self", ".", "version", "is", "None", ":", "first", "=", "True", "try", ":", "self", ".", "current_version", ",", "self", ".", "version...	31.521739	18.652174
def infer_activations(stmts): """Return inferred RegulateActivity from Modification + ActiveForm. This function looks for combinations of Modification and ActiveForm Statements and infers Activation/Inhibition Statements from them. For example, if we know that A phosphorylates B, and th...	[ "def", "infer_activations", "(", "stmts", ")", ":", "linked_stmts", "=", "[", "]", "af_stmts", "=", "_get_statements_by_type", "(", "stmts", ",", "ActiveForm", ")", "mod_stmts", "=", "_get_statements_by_type", "(", "stmts", ",", "Modification", ")", "for", "af_s...	45.519231	20.288462
def Copy(self): """Return a copy without registering in the attribute registry.""" return Attribute( self.predicate, self.attribute_type, self.description, self.name, _copy=True)	[ "def", "Copy", "(", "self", ")", ":", "return", "Attribute", "(", "self", ".", "predicate", ",", "self", ".", "attribute_type", ",", "self", ".", "description", ",", "self", ".", "name", ",", "_copy", "=", "True", ")" ]	27.375	16.375
def render(msgpack_data, saltenv='base', sls='', **kws): ''' Accepts a message pack string or a file object, renders said data back to a python dict. .. note: This renderer is NOT intended for use in creating sls files by hand, but exists to allow for data backends to serialize the high...	[ "def", "render", "(", "msgpack_data", ",", "saltenv", "=", "'base'", ",", "sls", "=", "''", ",", "", "", "kws", ")", ":", "if", "not", "isinstance", "(", "msgpack_data", ",", "six", ".", "string_types", ")", ":", "msgpack_data", "=", "msgpack_data", ...	37.952381	24.142857
def with_scopes_if_required(credentials, scopes): """Creates a copy of the credentials with scopes if scoping is required. This helper function is useful when you do not know (or care to know) the specific type of credentials you are using (such as when you use :func:`google.auth.default`). This functi...	[ "def", "with_scopes_if_required", "(", "credentials", ",", "scopes", ")", ":", "if", "isinstance", "(", "credentials", ",", "Scoped", ")", "and", "credentials", ".", "requires_scopes", ":", "return", "credentials", ".", "with_scopes", "(", "scopes", ")", "else",...	42.166667	25.208333
def process_input(self, data, input_prompt, lineno): """ Process data block for INPUT token. """ decorator, input, rest = data image_file = None image_directive = None is_verbatim = decorator=='@verbatim' or self.is_verbatim is_doctest = (decorator is no...	[ "def", "process_input", "(", "self", ",", "data", ",", "input_prompt", ",", "lineno", ")", ":", "decorator", ",", "input", ",", "rest", "=", "data", "image_file", "=", "None", "image_directive", "=", "None", "is_verbatim", "=", "decorator", "==", "'@verbatim...	40.447368	20.377193
def remove_event(self, ref): """ Removes an event for a ref (reference), """ # is this reference one which has been setup? if ref in self._refs: self._refs[ref].remove_callback(ref)	[ "def", "remove_event", "(", "self", ",", "ref", ")", ":", "# is this reference one which has been setup?", "if", "ref", "in", "self", ".", "_refs", ":", "self", ".", "_refs", "[", "ref", "]", ".", "remove_callback", "(", "ref", ")" ]	32.428571	7.285714
def group(seq: ActualIterable[T]) -> Dict[TR, List[T]]: """ >>> from Redy.Collections import Flow, Traversal >>> x = [1, 1, 2] >>> Flow(x)[Traversal.group].unbox """ ret = defaultdict(list) for each in seq: ret[each].append(each) return ret	[ "def", "group", "(", "seq", ":", "ActualIterable", "[", "T", "]", ")", "->", "Dict", "[", "TR", ",", "List", "[", "T", "]", "]", ":", "ret", "=", "defaultdict", "(", "list", ")", "for", "each", "in", "seq", ":", "ret", "[", "each", "]", ".", ...	27.1	11.7
def to_bytes(self, dochecksum=True): ''' Return packed byte representation of the UDP header. ''' csum = 0 if dochecksum: csum = self.checksum() return b''.join((struct.pack(ICMP._PACKFMT, self._type.value, self._code.value, csum), self._icmpdata.to_bytes()))	[ "def", "to_bytes", "(", "self", ",", "dochecksum", "=", "True", ")", ":", "csum", "=", "0", "if", "dochecksum", ":", "csum", "=", "self", ".", "checksum", "(", ")", "return", "b''", ".", "join", "(", "(", "struct", ".", "pack", "(", "ICMP", ".", ...	39	26.5
def rollback(using=None, sid=None): """ Possibility of calling transaction.rollback() in new Django versions (in atomic block). Important: transaction savepoint (sid) is required for Django < 1.8 """ if sid: django.db.transaction.savepoint_rollback(sid) else: try: dj...	[ "def", "rollback", "(", "using", "=", "None", ",", "sid", "=", "None", ")", ":", "if", "sid", ":", "django", ".", "db", ".", "transaction", ".", "savepoint_rollback", "(", "sid", ")", "else", ":", "try", ":", "django", ".", "db", ".", "transaction", ...	39.166667	20.166667
def http_method(self, method): """ Execute the given HTTP method and returns if it's success or not and the response as a string if not success and as python object after unjson if it's success. """ self.build_url() try: response = self.get_http_metho...	[ "def", "http_method", "(", "self", ",", "method", ")", ":", "self", ".", "build_url", "(", ")", "try", ":", "response", "=", "self", ".", "get_http_method", "(", "method", ")", "is_success", "=", "response", ".", "ok", "try", ":", "response_message", "="...	30.5	17.863636
def get_longs(): """ Get a dictionary that maps Backpage city names to their respective longitudes. Returns: dictionary that maps city names (Strings) to longitudes (Floats) """ longs = {} fname = pkg_resources.resource_filename(__name__, 'resources/Latitudes-Longitudes.csv') with open(fname, 'rb') a...	[ "def", "get_longs", "(", ")", ":", "longs", "=", "{", "}", "fname", "=", "pkg_resources", ".", "resource_filename", "(", "__name__", ",", "'resources/Latitudes-Longitudes.csv'", ")", "with", "open", "(", "fname", ",", "'rb'", ")", "as", "csvfile", ":", "# Re...	31.823529	19
def url_fix(s, charset='utf-8'): r"""Sometimes you get an URL by a user that just isn't a real URL because it contains unsafe characters like ' ' and so on. This function can fix some of the problems in a similar way browsers handle data entered by the user: >>> url_fix(u'http://de.wikipedia.org/wi...	[ "def", "url_fix", "(", "s", ",", "charset", "=", "'utf-8'", ")", ":", "# First step is to switch to unicode processing and to convert", "# backslashes (which are invalid in URLs anyways) to slashes. This is", "# consistent with what Chrome does.", "s", "=", "to_unicode", "(", "s",...	46.896552	22.965517
def p_statement(self, program): """ statement : decl \| quantum_op ';' \| format ';' \| ignore \| quantum_op error \| format error """ if len(program) > 2: if program[2] != ...	[ "def", "p_statement", "(", "self", ",", "program", ")", ":", "if", "len", "(", "program", ")", ">", "2", ":", "if", "program", "[", "2", "]", "!=", "';'", ":", "raise", "QasmError", "(", "\"Missing ';' at end of statement; \"", "+", "\"received\"", ",", ...	34.285714	9.428571
def highlight(self, message, values, *colors): ''' Highlighter works the way that message parameter is a template, the "values" is a list of arguments going one after another as values there. And so the "colors" should designate either highlight color or alternate for each. Ex...	[ "def", "highlight", "(", "self", ",", "message", ",", "", "values", ",", "", "*", "colors", ")", ":", "m_color", "=", "colors", ".", "get", "(", "'_main'", ",", "self", ".", "_default_color", ")", "h_color", "=", "colors", ".", "get", "(", "'_highl...	42.631579	32.578947
def remove(self, digest): """Remove an existing file from fsdb. File with the given digest will be removed from fsdb and the directory tree will be cleaned (remove empty folders) Args: digest -- digest of the file to remove """ # remove file abs...	[ "def", "remove", "(", "self", ",", "digest", ")", ":", "# remove file", "absPath", "=", "self", ".", "get_file_path", "(", "digest", ")", "os", ".", "remove", "(", "absPath", ")", "# clean directory tree", "tmpPath", "=", "os", ".", "path", ".", "dirname",...	37.5	16.409091
def _astroid_bootstrapping(): """astroid bootstrapping the builtins module""" # this boot strapping is necessary since we need the Const nodes to # inspect_build builtins, and then we can proxy Const builder = InspectBuilder() astroid_builtin = builder.inspect_build(builtins) # pylint: disable=...	[ "def", "_astroid_bootstrapping", "(", ")", ":", "# this boot strapping is necessary since we need the Const nodes to", "# inspect_build builtins, and then we can proxy Const", "builder", "=", "InspectBuilder", "(", ")", "astroid_builtin", "=", "builder", ".", "inspect_build", "(", ...	38.413793	15.465517
def quad_fejer(order, lower=0, upper=1, growth=False, part=None): """ Generate the quadrature abscissas and weights in Fejer quadrature. Example: >>> abscissas, weights = quad_fejer(3, 0, 1) >>> print(numpy.around(abscissas, 4)) [[0.0955 0.3455 0.6545 0.9045]] >>> print(nump...	[ "def", "quad_fejer", "(", "order", ",", "lower", "=", "0", ",", "upper", "=", "1", ",", "growth", "=", "False", ",", "part", "=", "None", ")", ":", "order", "=", "numpy", ".", "asarray", "(", "order", ",", "dtype", "=", "int", ")", ".", "flatten"...	28.934783	18.673913
def save_df_output( df_output: pd.DataFrame, freq_s: int = 3600, site: str = '', path_dir_save: Path = Path('.'),)->list: '''save supy output dataframe to txt files Parameters ---------- df_output : pd.DataFrame output dataframe of supy simulation freq_s : in...	[ "def", "save_df_output", "(", "df_output", ":", "pd", ".", "DataFrame", ",", "freq_s", ":", "int", "=", "3600", ",", "site", ":", "str", "=", "''", ",", "path_dir_save", ":", "Path", "=", "Path", "(", "'.'", ")", ",", ")", "->", "list", ":", "list_...	41.683333	21.816667
def location_lookup(self, req_location): """ returns full location given samecode or county and state. Returns False if not valid. currently locations are a dictionary, once other geo data is added, they will move to a location class/obj """ location = False try: ...	[ "def", "location_lookup", "(", "self", ",", "req_location", ")", ":", "location", "=", "False", "try", ":", "location", "=", "self", ".", "samecodes", "[", "req_location", "[", "'code'", "]", "]", "except", "Exception", ":", "pass", "try", ":", "location",...	35.75	25.25
def pathways(F, A, B, fraction=1.0, maxiter=1000): r"""Decompose flux network into dominant reaction paths. Parameters ---------- F : (M, M) scipy.sparse matrix The flux network (matrix of netflux values) A : array_like The set of starting states B : array_like The set o...	[ "def", "pathways", "(", "F", ",", "A", ",", "B", ",", "fraction", "=", "1.0", ",", "maxiter", "=", "1000", ")", ":", "if", "issparse", "(", "F", ")", ":", "return", "sparse", ".", "pathways", ".", "pathways", "(", "F", ",", "A", ",", "B", ",", ...	35.78	23.12
def log_event(self, event, text = None): """ Log lines of text associated with a debug event. @type event: L{Event} @param event: Event object. @type text: str @param text: (Optional) Text to log. If no text is provided the default is to show a description...	[ "def", "log_event", "(", "self", ",", "event", ",", "text", "=", "None", ")", ":", "self", ".", "__do_log", "(", "DebugLog", ".", "log_event", "(", "event", ",", "text", ")", ")" ]	33.25	16.583333

def _get_interpretation_function(interpretation, dtype): """ Retrieves the interpretation function used. """ type_string = dtype.__name__ name = "%s__%s" % (interpretation, type_string) global _interpretations if not hasattr(_interpretations, name): raise ValueError("No transform ...

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def graded_submissions(self): ''' Queryset for the graded submissions, which are worth closing. ''' qs = self._valid_submissions().filter(state__in=[Submission.GRADED]) return qs

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def updateModel(self, X_all, Y_all, X_new, Y_new): """ Updates the model with new observations. """ if self.model is None: self._create_model(X_all, Y_all) else: self.model.set_XY(X_all, Y_all) # WARNING: Even if self.max_iters=0, the hyperparamet...

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def _getSDRPairs(self, pairs, noise=None, locationNoise=None, includeRandomLocation=False, numAmbiguousLocations=0): """ This method takes a list of (location, feature) index pairs (one pair per cortical column), ...

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def make_benchark(n_train, n_test, n_dim=2): """ Compute the benchmarks for Ordianry Kriging Parameters ---------- n_train : int number of points in the training set n_test : int number of points in the test set n_dim : int number of dimensions (default=2) Returns --...

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def get_words(data): """ Extracts the words from given string. Usage:: >>> get_words("Users are: John Doe, Jane Doe, Z6PO.") [u'Users', u'are', u'John', u'Doe', u'Jane', u'Doe', u'Z6PO'] :param data: Data to extract words from. :type data: unicode :return: Words. :rtype: l...

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def generate(declaration, headers=None, has_iterators=False): """Compile and load the reflection dictionary for a type. If the requested dictionary has already been cached, then load that instead. Parameters ---------- declaration : str A type declaration (for example "vector<int>") he...

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def create_db(name, owner=None, encoding=u'UTF-8', template='template1', **kwargs): """Create a Postgres database.""" flags = u'' if encoding: flags = u'-E %s' % encoding if owner: flags = u'%s -O %s' % (flags, owner) if template and template != 'template1': fl...

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def validate_page(ctx, param, value): """Ensure that a valid value for page is chosen.""" # pylint: disable=unused-argument if value == 0: raise click.BadParameter( "Page is not zero-based, please set a value to 1 or higher.", param=param ) return value

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def characterize_local_files(filedir, max_bytes=MAX_FILE_DEFAULT): """ Collate local file info as preperation for Open Humans upload. Note: Files with filesize > max_bytes are not included in returned info. :param filedir: This field is target directory to get files from. :param max_bytes: This fi...

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def _raise_rpc_timeout_error(self, uuid): """Gather information and raise an Rpc exception. :param str uuid: Rpc Identifier. :return: """ requests = [] for key, value in self._request.items(): if value == uuid: requests.append(key) sel...

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def hill_climbing_stochastic(problem, iterations_limit=0, viewer=None): ''' Stochastic hill climbing. If iterations_limit is specified, the algorithm will end after that number of iterations. Else, it will continue until it can't find a better node than the current one. Requires: SearchProblem....

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def update(self, current, values=[], exact=[], strict=[]): """ Updates the progress bar. # Arguments current: Index of current step. values: List of tuples (name, value_for_last_step). The progress bar will display averages for these values. ex...

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def encode(*args, **kwargs): """ A helper function to encode an element. @param args: The python data to be encoded. @kwarg encoding: AMF encoding type. One of L{ENCODING_TYPES}. @return: A L{util.BufferedByteStream} object that contains the data. """ encoding = kwargs.pop('encoding', DEFAU...

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def detect_palette_support(basic_palette=None): ''' Returns whether we think the terminal supports basic, extended, or truecolor. None if not able to tell. Returns: None or str: 'basic', 'extended', 'truecolor' ''' result = col_init = win_enabled = None TERM = env.TERM or '...

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def after_func_accept_retry_state(fn): """Wrap "after" function to accept "retry_state".""" if not six.callable(fn): return fn if func_takes_retry_state(fn): return fn @_utils.wraps(fn) def wrapped_after_sleep_func(retry_state): # func, trial_number, trial_time_taken ...

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def _combine_costs(self, Npwl, Hpwl, Cpwl, fparm_pwl, any_pwl, Npol, Hpol, Cpol, fparm_pol, npol, nw): """ Combines pwl, polynomial and user-defined costs. """ NN = vstack([n for n in [Npwl, Npol] if n is not None], "csr") if (Hpwl is not None) and (Hpol is not No...

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def dump(self): """Saves state database.""" assert self.database is not None cmd = "SELECT count from {} WHERE rowid={}" self._execute(cmd.format(self.STATE_INFO_TABLE, self.STATE_INFO_ROW)) ret = self._fetchall() assert len(ret) == 1 assert len(ret[0]) == 1 ...

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def send_last_message(self, msg, connection_id=None): """ Should be used instead of send_message, when you want to close the connection once the message is sent. :param msg: protobuf validator_pb2.Message """ zmq_identity = None if connection_id is not None and s...

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def create_strategy(name=None): """ Create a strategy, or just returns it if it's already one. :param name: :return: Strategy """ import logging from bonobo.execution.strategies.base import Strategy if isinstance(name, Strategy): return name if name is None: name ...

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def deserialize(self, obj=None, ignore_non_existing=False): """ :type obj dict|None :type ignore_non_existing bool """ if not isinstance(obj, dict): if ignore_non_existing: return raise TypeError("Wrong data '{}' passed for '{}' deserialization".format(obj, self.__class__.__name...

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def parse_eff(filename): """ Parse through Jean-Marcs OSSSO .eff files. The efficiency files comes in 'chunks' meant to be used at different 'rates' of motion. """ blocks = [] block = {} with open(filename) as efile: for line in efile.readlines(): if line.lstrip()....

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def getExtensions(self): """returns objects for all map service extensions""" extensions = [] if isinstance(self.supportedExtensions, list): for ext in self.supportedExtensions: extensionURL = self._url + "/exts/%s" % ext if ext == "SchematicsServer": ...

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def draw_line(self, lx, ltor): '''Draw a series of elements from left to right''' tag = self.get_tag() c = self.canvas s = self.style sep = s.h_sep exx = 0 exy = 0 terms = lx if ltor else reversed(lx) # Reverse so we can draw left to right for term in terms: t, texx,...

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def ext_from_filename(filename): """ Scan a filename for it's extension. :param filename: string of the filename :return: the extension off the end (empty string if it can't find one) """ try: base, ext = filename.lower().rsplit(".", 1) except ValueError: return '' ext = ".{...

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def label_position(self): ''' Find the largest region and position the label in that. ''' reg_sizes = [(r.size(), r) for r in self.pieces] reg_sizes.sort() return reg_sizes[-1][1].label_position()

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def unpack(cls, msg, client, server, _): """Parse message and return an `OpKillCursors`. Takes the client message as bytes, the client and server socket objects, and the client request id. """ # Leading 4 bytes are reserved. num_of_cursor_ids, = _UNPACK_INT(msg[4:8]) ...

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async def _seek(self, ctx, *, time: str): """ Seeks to a given position in a track. """ player = self.bot.lavalink.players.get(ctx.guild.id) if not player.is_playing: return await ctx.send('Not playing.') seconds = time_rx.search(time) if not seconds: ...

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def _add_warc_action_log(self, path, url): '''Add the action log to the WARC file.''' _logger.debug('Adding action log record.') actions = [] with open(path, 'r', encoding='utf-8', errors='replace') as file: for line in file: actions.append(json.loads(line)) ...

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def create_bucket(self, bucket_name, region_name=None): """ Creates an Amazon S3 bucket. :param bucket_name: The name of the bucket :type bucket_name: str :param region_name: The name of the aws region in which to create the bucket. :type region_name: str """ ...

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def _get_local_ip(self): """Try to determine the local IP address of the machine.""" try: sock = socket.socket(socket.AF_INET, socket.SOCK_DGRAM) # Use Google Public DNS server to determine own IP sock.connect(('8.8.8.8', 80)) return sock.getsockname()[0...

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33.1875

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def reset(self): """Resets the sampler to its initial state Note ---- This will destroy the label cache and history of estimates. """ self._TP = np.zeros(self._n_class) self._FP = np.zeros(self._n_class) self._FN = np.zeros(self._n_class) self._TN...

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def _get_model_reference(self, model_id): """Constructs a ModelReference. Args: model_id (str): the ID of the model. Returns: google.cloud.bigquery.model.ModelReference: A ModelReference for a model in this dataset. """ return ModelReference.from_api_repr( {"pro...

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def last_seen(self): """Return mattress last seen time.""" """ These values seem to be rarely updated correctly in the API. Don't expect accurate results from this property. """ try: if self.side == 'left': lastseen = self.device.device_data['l...

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35.941176

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def lock(self, name, timeout=None, sleep=0.1): """ Return a new Lock object using key ``name`` that mimics the behavior of threading.Lock. If specified, ``timeout`` indicates a maximum life for the lock. By default, it will remain locked until release() is called. ``sle...

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def _copy(query_dict): """ Return a mutable copy of `query_dict`. This is a workaround to Django bug #13572, which prevents QueryDict.copy from working. """ memo = { } result = query_dict.__class__('', encoding=query_dict.encoding, mutable=True) memo[id(query_dict)] = resu...

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def split_at_single(text, sep, not_before=[], not_after=[]): """Works like text.split(sep) but separated fragments cant end with not_before or start with not_after""" n = 0 lt, s = len(text), len(sep) last = 0 while n < lt: if not s + n > lt: if sep == text[n:n + s]: ...

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def reorderMAT(m, H=5000, cost='line'): ''' This function reorders the connectivity matrix in order to place more edges closer to the diagonal. This often helps in displaying community structure, clusters, etc. Parameters ---------- MAT : NxN np.ndarray connection matrix H : int...

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29.861111

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def equivalence_transform(compound, from_positions, to_positions, add_bond=True): """Computes an affine transformation that maps the from_positions to the respective to_positions, and applies this transformation to the compound. Parameters ---------- compound : mb.Compound The Compound to b...

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44.731707

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def delete(self, key): """Adds deletion of the entity with given key to the mutation buffer. If mutation buffer reaches its capacity then this method commit all pending mutations from the buffer and emties it. Args: key: key of the entity which should be deleted """ self._cur_batch.delet...

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31.071429

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def _convert_a_header_to_a_h2_header(self, hdr_name, hdr_value, is_sensitive, should_index): # noqa: E501 # type: (str, str, Callable[[str, str], bool], Callable[[str], bool]) -> Tuple[HPackHeaders, int] # noqa: E501 """ _convert_a_header_to_a_h2_header builds a HPackHeaders from a header name...

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37.297872

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def arg_to_json(arg): """ Perform necessary JSON conversion on the arg. """ conversion = json_conversions.get(type(arg)) if conversion: return conversion(arg) for type_ in subclass_conversions: if isinstance(arg, type_): return json_conversions[type_](arg) return ...

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30.545455

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def get_report(host, userid, password, port=443, auth_method='basic', client_timeout=60): """get iRMC report This function returns iRMC report in XML format :param host: hostname or IP of iRMC :param userid: userid for iRMC with administrator privileges :param password: password for ...

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34.921569

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def action_edit_save(self, courseid, taskid, path, content): """ Save an edited file """ wanted_path = self.verify_path(courseid, taskid, path) if wanted_path is None: return json.dumps({"error": True}) try: self.task_factory.get_task_fs(courseid, taskid).put(want...

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45.1

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def handle_lock_expired( payment_state: InitiatorPaymentState, state_change: ReceiveLockExpired, channelidentifiers_to_channels: ChannelMap, block_number: BlockNumber, ) -> TransitionResult[InitiatorPaymentState]: """Initiator also needs to handle LockExpired messages when refund tra...

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38.76087

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def WriteFileHash(self, path, hash_value): """Writes the file path and hash to file. Args: path (str): path of the file. hash_value (str): message digest hash calculated over the file data. """ string = '{0:s}\t{1:s}\n'.format(hash_value, path) encoded_string = self._EncodeString(strin...

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32.363636

16

def _cosine(a, b): """ Return the len(a & b) / len(a) """ return 1. * len(a & b) / (math.sqrt(len(a)) * math.sqrt(len(b)))

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42.666667

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def list_events(self, source=None, severity=None, text_filter=None, start=None, stop=None, page_size=500, descending=False): """ Reads events between the specified start and stop time. Events are sorted by generation time, source, then sequence number. :param str so...

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45.477273

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def flatten(lst): """Flatten list. Args: lst (list): List to flatten Returns: generator """ for elm in lst: if isinstance(elm, collections.Iterable) and not isinstance( elm, string_types): for sub in flatten(elm): yield sub ...

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23.857143

16.357143

def recent_activity(self, user_id): """Recent activity (actions) for a given user""" M = models # noqa if request.args.get('limit'): limit = int(request.args.get('limit')) else: limit = 1000 qry = ( db.session.query(M.Log, M.Dashboard, M.Sli...

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30.957447

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def log_path(cls, project, log): """Return a fully-qualified log string.""" return google.api_core.path_template.expand( "projects/{project}/logs/{log}", project=project, log=log )

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42.4

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def centers_std(self): """The standardized centers for the kmeans model.""" o = self._model_json["output"] cvals = o["centers_std"].cell_values centers_std = [list(cval[1:]) for cval in cvals] centers_std = [list(x) for x in zip(*centers_std)] return centers_std

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43.428571

10.285714

def create_deamon(cmd, shell=False, root=False): """Usage: Create servcice process. """ try: if root: cmd.insert(0, 'sudo') LOG.info(cmd) subproc = subprocess.Popen(cmd, shell=shell, stdout=subprocess.PIPE, stderr=subprocess.PIPE...

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28.357143

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def language(s): """ Returns a (language, confidence)-tuple for the given string. """ s = decode_utf8(s) s = set(w.strip(PUNCTUATION) for w in s.replace("'", "' ").split()) n = float(len(s) or 1) p = {} for xx in LANGUAGES: lexicon = _module(xx).__dict__["lexicon"] p[xx] = su...

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37.727273

16.727273

def create_user(email, password, active, confirmed_at, send_email): """ Create a new user. """ if confirmed_at == 'now': confirmed_at = security.datetime_factory() user = user_manager.create(email=email, password=password, active=active, confirmed_at=confirmed_...

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43.285714

17.714286

def hook_inform(self, inform_name, callback): """Hookup a function to be called when an inform is received. Useful for interface-changed and sensor-status informs. Parameters ---------- inform_name : str The name of the inform. callback : function ...

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32.625

17.5

def enthalpy_Cpg_Hvap(self): r'''Method to calculate the enthalpy of an ideal mixture (no pressure effects). This routine is based on "route A", where only the gas heat capacity and enthalpy of vaporization are used. The reference temperature is a property of the class; it defau...

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41.672414

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def coerce(self, value): """Convert text values into integer values. Args: value (str or int): The value to coerce. Raises: TypeError: If the value is not an int or string. ValueError: If the value is not int or an acceptable value. Return...

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27.444444

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def load(self, filepath): """Load configuration from existing file. :param str filepath: Path to existing config file. :raises: ValueError if supplied config file is invalid. """ try: self._config.read(filepath) self.long_running_operation_timeout = self....

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41.0625

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def update_pulled_fields(instance, imported_instance, fields): """ Update instance fields based on imported from backend data. Save changes to DB only one or more fields were changed. """ modified = False for field in fields: pulled_value = getattr(imported_instance, field) curre...

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47.75

21.75

def _Close(self): """Closes the file-like object. If the file-like object was passed in the init function the file object-based file-like object does not control the file-like object and should not actually close it. """ if not self._file_object_set_in_init: try: # TODO: fix close...

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32.571429

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def add_optional_arg_param(self, param_name, layer_index, blob_index): """Add an arg param. If there is no such param in .caffemodel fie, silently ignore it.""" blobs = self.layers[layer_index].blobs if blob_index < len(blobs): self.add_arg_param(param_name, layer_index, blob_index)

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63

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def load_plugins(classprefix, plugin_list): """ loads the plugins specified in the list :param classprefix: the class prefix :param plugin_list: the list of plugins """ # classprefix "cmd3.plugins." plugins = [] import_object = {} # log.info(str(list)) for plugin in plugin_list: ...

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34.914286

14.4

def create_oracle(username, password, host, port, database, **kwargs): # pragma: no cover """ create an engine connected to a oracle database using cx_oracle. """ return create_engine( _create_oracle(username, password, host, port, database), **kwargs )

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35.375

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def call(self, name, *args, **kwargs): """Make a SoftLayer API call :param service: the name of the SoftLayer API service :param method: the method to call on the service :param \\*args: same optional arguments that ``BaseClient.call`` takes :param \\*\\*kwargs: same optional ke...

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37.684211

22.473684

def IV(abf,T1,T2,plotToo=True,color='b'): """ Given two time points (seconds) return IV data. Optionally plots a fancy graph (with errorbars) Returns [[AV],[SD]] for the given range. """ rangeData=abf.average_data([[T1,T2]]) #get the average data per sweep AV,SD=rangeData[:,0,0],rangeData[:,...

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38.912281

16.912281

def add_filter(self, name, filter_values): """ Add a filter for a facet. """ # normalize the value into a list if not isinstance(filter_values, (tuple, list)): if filter_values is None: return filter_values = [filter_values, ] # re...

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30.157895

14.157895

def _listen(self): """Listen for messages passed from parent This method distributes messages received via stdin to their corresponding channel. Based on the format of the incoming message, the message is forwarded to its corresponding channel to be processed by its correspondin...

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38.534884

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def replace(self, left=None, lower=None, upper=None, right=None, ignore_inf=True): """ Create a new interval based on the current one and the provided values. Callable can be passed instead of values. In that case, it is called with the current corresponding value except if ignore_inf i...

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40.777778

25.833333

def check_cgroup_availability_in_thread(options): """ Run check_cgroup_availability() in a separate thread to detect the following problem: If "cgexec --sticky" is used to tell cgrulesengd to not interfere with our child processes, the sticky flag unfortunately works only for processes spawned by th...

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42

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def _set_logging( logger_name="colin", level=logging.INFO, handler_class=logging.StreamHandler, handler_kwargs=None, format='%(asctime)s.%(msecs).03d %(filename)-17s %(levelname)-6s %(message)s', date_format='%H:%M:%S'): """ Set personal logger for this library. ...

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def setup(self): """ Create mask list. Consists of all tuples between which this filter accepts lines. """ # get start and end of the mask and set a start_limit if not self.mask_source.start: raise SystemExit("Can't parse format of %s. Is this a log file or "...

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def _attrs_to_init_script( attrs, frozen, slots, post_init, cache_hash, base_attr_map, is_exc ): """ Return a script of an initializer for *attrs* and a dict of globals. The globals are expected by the generated script. If *frozen* is True, we cannot set the attributes directly so we use a cac...

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def CountHuntLogEntries(self, hunt_id, cursor=None): """Returns number of hunt log entries of a given hunt.""" hunt_id_int = db_utils.HuntIDToInt(hunt_id) query = ("SELECT COUNT(*) FROM flow_log_entries " "FORCE INDEX(flow_log_entries_by_hunt) " "WHERE hunt_id = %s AND flow_id = h...

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def check_array(array, *args, **kwargs): """Validate inputs Parameters ---------- accept_dask_array : bool, default True accept_dask_dataframe : bool, default False accept_unknown_chunks : bool, default False For dask Arrays, whether to allow the `.chunks` attribute to contain a...

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def _pigpio_aio_command(self, cmd, p1, p2,): """ Runs a pigpio socket command. sl:= command socket and lock. cmd:= the command to be executed. p1:= command parameter 1 (if applicable). p2:= command parameter 2 (if applicable). """ with (yield from self...

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def from_json(cls, raw): """Helper to construct a blob from a dict. Args: raw (dict): Raw blob representation. Returns: NodeBlob: A NodeBlob object or None. """ if raw is None: return None bcls = None _type = raw.get('type') ...

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def annual_return(returns, period=DAILY, annualization=None): """ Determines the mean annual growth rate of returns. This is equivilent to the compound annual growth rate. Parameters ---------- returns : pd.Series or np.ndarray Periodic returns of the strategy, noncumulative. - ...

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def version_to_write(self, found): # type: (str) -> Version """ Take 1st version string found. :param found: possible version string :return: """ first = False if self.version is None: first = True try: self.current_version...

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def infer_activations(stmts): """Return inferred RegulateActivity from Modification + ActiveForm. This function looks for combinations of Modification and ActiveForm Statements and infers Activation/Inhibition Statements from them. For example, if we know that A phosphorylates B, and th...

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def Copy(self): """Return a copy without registering in the attribute registry.""" return Attribute( self.predicate, self.attribute_type, self.description, self.name, _copy=True)

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def render(msgpack_data, saltenv='base', sls='', **kws): ''' Accepts a message pack string or a file object, renders said data back to a python dict. .. note: This renderer is NOT intended for use in creating sls files by hand, but exists to allow for data backends to serialize the high...

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def with_scopes_if_required(credentials, scopes): """Creates a copy of the credentials with scopes if scoping is required. This helper function is useful when you do not know (or care to know) the specific type of credentials you are using (such as when you use :func:`google.auth.default`). This functi...

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def process_input(self, data, input_prompt, lineno): """ Process data block for INPUT token. """ decorator, input, rest = data image_file = None image_directive = None is_verbatim = decorator=='@verbatim' or self.is_verbatim is_doctest = (decorator is no...

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def remove_event(self, ref): """ Removes an event for a ref (reference), """ # is this reference one which has been setup? if ref in self._refs: self._refs[ref].remove_callback(ref)

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def group(seq: ActualIterable[T]) -> Dict[TR, List[T]]: """ >>> from Redy.Collections import Flow, Traversal >>> x = [1, 1, 2] >>> Flow(x)[Traversal.group].unbox """ ret = defaultdict(list) for each in seq: ret[each].append(each) return ret

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def to_bytes(self, dochecksum=True): ''' Return packed byte representation of the UDP header. ''' csum = 0 if dochecksum: csum = self.checksum() return b''.join((struct.pack(ICMP._PACKFMT, self._type.value, self._code.value, csum), self._icmpdata.to_bytes()))

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def rollback(using=None, sid=None): """ Possibility of calling transaction.rollback() in new Django versions (in atomic block). Important: transaction savepoint (sid) is required for Django < 1.8 """ if sid: django.db.transaction.savepoint_rollback(sid) else: try: dj...

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def http_method(self, method): """ Execute the given HTTP method and returns if it's success or not and the response as a string if not success and as python object after unjson if it's success. """ self.build_url() try: response = self.get_http_metho...

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def get_longs(): """ Get a dictionary that maps Backpage city names to their respective longitudes. Returns: dictionary that maps city names (Strings) to longitudes (Floats) """ longs = {} fname = pkg_resources.resource_filename(__name__, 'resources/Latitudes-Longitudes.csv') with open(fname, 'rb') a...

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def url_fix(s, charset='utf-8'): r"""Sometimes you get an URL by a user that just isn't a real URL because it contains unsafe characters like ' ' and so on. This function can fix some of the problems in a similar way browsers handle data entered by the user: >>> url_fix(u'http://de.wikipedia.org/wi...

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def highlight(self, message, *values, **colors): ''' Highlighter works the way that message parameter is a template, the "values" is a list of arguments going one after another as values there. And so the "colors" should designate either highlight color or alternate for each. Ex...

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def remove(self, digest): """Remove an existing file from fsdb. File with the given digest will be removed from fsdb and the directory tree will be cleaned (remove empty folders) Args: digest -- digest of the file to remove """ # remove file abs...

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def _astroid_bootstrapping(): """astroid bootstrapping the builtins module""" # this boot strapping is necessary since we need the Const nodes to # inspect_build builtins, and then we can proxy Const builder = InspectBuilder() astroid_builtin = builder.inspect_build(builtins) # pylint: disable=...

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def quad_fejer(order, lower=0, upper=1, growth=False, part=None): """ Generate the quadrature abscissas and weights in Fejer quadrature. Example: >>> abscissas, weights = quad_fejer(3, 0, 1) >>> print(numpy.around(abscissas, 4)) [[0.0955 0.3455 0.6545 0.9045]] >>> print(nump...

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def save_df_output( df_output: pd.DataFrame, freq_s: int = 3600, site: str = '', path_dir_save: Path = Path('.'),)->list: '''save supy output dataframe to txt files Parameters ---------- df_output : pd.DataFrame output dataframe of supy simulation freq_s : in...

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def location_lookup(self, req_location): """ returns full location given samecode or county and state. Returns False if not valid. *currently locations are a dictionary, once other geo data is added, they will move to a location class/obj* """ location = False try: ...

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def pathways(F, A, B, fraction=1.0, maxiter=1000): r"""Decompose flux network into dominant reaction paths. Parameters ---------- F : (M, M) scipy.sparse matrix The flux network (matrix of netflux values) A : array_like The set of starting states B : array_like The set o...

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def log_event(self, event, text = None): """ Log lines of text associated with a debug event. @type event: L{Event} @param event: Event object. @type text: str @param text: (Optional) Text to log. If no text is provided the default is to show a description...

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33.25

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