id stringlengths 12 30 | sequence stringlengths 12 4.38k | secondary_structure stringlengths 12 4.38k | aligned_ids listlengths 1 10 | aligned_sequences listlengths 1 10 | split stringclasses 4
values |
|---|---|---|---|---|---|
URS0001A24876_1189620_1-28 | UAACCUCUGGCGAGAUCCGCGUAUGUUG | ((((...(.(((.....)))..).)))) | [
"URS0001A24876_1189620/1-28",
"URS0001A23379_12908/1-28",
"URS0001A24876_12908/1-28",
"URS0001A23FFB_12908/1-28",
"URS0001A23F07_12908/1-28"
] | [
"UAACCUCUGGCG--AGAUC-------CGCGUAUGUUG",
"CAACCUCUGGCG--AGGGA-------CGUGUAUGUUG",
"UAACCUCUGGCG--AGAUC-------CGCGUAUGUUG",
"CAACCUCUGGCG--AGAUC-------CGUGUAUGUUG",
"CAACCUCUGGCG--AAAUC-------CGCGAAUGUUG"
] | rfam_14_5_ref |
URS0001A24886_12908_1-34 | CUAUGUCUGACAUUACUAGACAUGGCGGAAGGAG | ((((((((.........))))))))......... | [
"URS0001A24886_12908/1-34",
"URS0001A23941_12908/1-33",
"URS0001A23970_12908/1-29",
"URS0001A232DD_12908/1-33",
"URS0001A23FF4_12908/1-31",
"URS0001A2474C_12908/1-31",
"URS0001A23FA9_12908/1-32",
"URS0001A24754_12908/1-29",
"URS0001A24909_12908/1-29",
"URS0001A24544_12908/1-32"
] | [
"CUAUG-------UCUG---------ACAUUAC---------------UAGA-------CAUGG-C--GGAAGGAG",
"CUAUA-------UCAG---------AAGUAA----------------UUGA-------UAUGG-C--GGAAGGAG",
"CUAUG-------GAC----------GUGA-------------------GUU-------CAUGG-C--GGAAGGAG",
"CUAUG-------UUUU---------UAUAAC----------------AAAA-------CAUGG-C--GGAAG... | rfam_14_5_ref |
URS0001A2488A_12908_1-77 | GGCACCUUGCUUAGAAGUUGCCGCGCCGGAUAGUGUUAAUAGUCGUGCCUUUGGCCGGACACGAUGGUUAGGGAAUC | ((((.(..........).)))).............(((((.((((((.((......)).)))))).)))))...... | [
"URS0001A2488A_12908/1-77",
"URS0001A23525_12908/1-77",
"URS0001A23E49_12908/1-77",
"URS0001A236D6_12908/1-77",
"URS0001A23F24_12908/1-77",
"URS0001A23C48_12908/1-77",
"URS0001A24286_12908/1-77",
"URS0001A242BB_12908/1-72"
] | [
"GGCACCUU---GCUUAG----------AAGUUGCC---GCGCCGGAUAGUGUUAAUAGUC--GU--GCCU----------UUGGCC-GGACA-CGAUGGUUAGGG-AAUC",
"GGUAGC-----UUGCUUAGAA--------GUUGCC---GCGCCGGAUAGUGUUAAUAGUC--GU--GCCU----------UUGGCC-GGACA-CGAUGGUUAGGG-AAUC",
"GGCAGC-----UUGCUUAGAA--------GUUGCC---GCGCCGGAUAGUGUUAAUAGUC--GU--GCCU----------UUG... | rfam_14_5_ref |
URS0001A2488B_1121363_1-66 | ACUCGGGCACGAUCCCUGGACGUUAUACAAGGCCUUGGAACCGACCCGAUGUUCAAUCCUGAGGGA | ((.((((.....(((..((.............))..))).....))))..)).............. | [
"URS0001A2488B_1121363/1-66",
"URS0001A245E5_1717/1-60",
"URS0001A245E5_1166015/1-60",
"URS0001A23C2C_1450522/1-60",
"URS0001A23AC8_1125779/1-59",
"URS0001A24087_196164/1-55"
] | [
"ACUCGGGCACGAUCCCUGG-------------------------------------------------ACGUUAUACAAGG---------------------------------------------------------------------CCUUGGAACCGACCCGAUGU--UCAAUCCUGAGGGA",
"ACUCGAGCACGAUCUUCAC-------------------------------------------------CGUGAU-------------------------------------------------... | rfam_14_5_ref |
URS0001A2488F_12908_1-76 | AUGCAAAUGGUGUUUGUGGGUUUCCAUGAAGCCGUGGGGCAGGGAUUGCGCAAUACCUGUACCCCGCCAUUUGCCA | ..(((((((((((((((((....))))))).....(((.((((............))))..))))))))))))).. | [
"URS0001A2488F_12908/1-76",
"URS0001A24673_194439/1-76"
] | [
"AUGCAA-AUGGU-GUUUGUGG----GUUU----------CCAUGAAGCCGUGGGG---CAGGGAUUGCGCAAU-ACCUGU-ACCCCGCCAU--UUGCCA",
"ACGCGA-AUGGU-GUUCGUGC----GUCC----------GCAUGAAGCCGUGAAA--GCAGG-GAUGCGCAAU-ACCUGU-UUUCCGCCAU--UUGCAC"
] | rfam_14_5_ref |
URS0001A248A1_12908_1-78 | UUGCAAGUGGUGUUCAUAGCUUAUAUGAAGCCAAGGAGCAUAUGGGAUGCGCAAUACCAGUGUUCCCGCCAUUUGCUU | ..((((((((((((((((.....)))))).....((((....(((...........)))...)))))))))))))).. | [
"URS0001A248A1_12908/1-78",
"URS0001A23319_331678/1-75"
] | [
"UUGCAA-GUGGU-GUUCAUA-----GCUUA----------UAUGAAGCCAAGGAGCAUAUGG-GAUGCGCAAU-ACCAGUGUUCCCGCCAU--UUGCUU",
"UUGCAA-GUGGU-GUUCAUG-----UGGUAU---------CCUGAAUCCAAGGGA---CAGG-GAUGCGCAAU-ACCUGA-UCCCCACCAU--UUGUAU"
] | rfam_14_5_ref |
URS0001A248A8_12908_1-83 | AAGGUUCCGGUUCACGCCUGAGCCACCGCCCUGGGCCAGAAACGUGGCGAGUGCGGUCAAGCGAUGACGGCGACCCGGCGACC | ..(((.((((....((((..................................................))))..))))..))) | [
"URS0001A248A8_12908/1-83",
"URS0001A235C5_1246995/1-70",
"URS0001A235C5_12908/1-70",
"URS0001A24822_12908/1-70",
"URS0001A237F5_543632/1-70",
"URS0001A234CE_1120949/1-70"
] | [
"AAGG-UUCCGGUUCACGCC---UGAGC--CACCGCCCUGGGCCA----GAAACG----------------------------------------------UGGCG-AGUGCGGUCAAGCGAUGACGGCGACCCGGCG-ACC",
"AAGG-UUCCGGUUCACGCU-CGAGU--CG-UCCGCCCU----------AGC-------------------------------------------------------GGGGCGGUUCGGUGCUGACGGCGACCCGGCG-ACC",
"AAGG-UUCCGGUUCACGCU-C... | rfam_14_5_ref |
URS0001A248A9_1331007_1-60 | CGUAUGGUGUUUGGUGUCAAUUGUGGCGACCAGAUGGCGAUACGGCCCAAGUAUUGAGGU | (((((.((..(((((.............)))))...)).)))))................ | [
"URS0001A248A9_1331007/1-60",
"URS0001A24685_12908/1-52",
"URS0001A24685_715451/1-52",
"URS0001A248FB_12908/1-52",
"URS0001A247BA_12908/1-53",
"URS0001A244EB_12908/1-47",
"URS0001A24A10_1195246/1-55",
"URS0001A23EA1_1197174/1-56",
"URS0001A23EA1_12908/1-56",
"URS0001A233EC_12908/1-51"
] | [
"CGUAUGGUGUUUGGU-------GUCA---------AUUG-----------------------UGGC----G-ACCAG-AUGGCGAUACGGCCCAAGUAUU---GAGGU",
"CGUAUGGUGUUUGG-C-------------------UUCGG------------------------------G--CCAA-AUAGCGAUACGGCCUCAUAUUG---AAGGU",
"CGUAUGGUGUUUGG-C-------------------UUCGG------------------------------G--CCAA-AUAGCGAUA... | rfam_14_5_ref |
URS0001A248B6_12908_1-67 | UAUAUUUUGCCGCGCUAAUUAAAAAUUAAUUAGCUACAUAAUAAUCAUUUAUAACAAUAUUGGCAUG | ..............((((((.......)))))).................................. | [
"URS0001A248B6_12908/1-67",
"URS0001A23BD8_12908/1-57",
"URS0001A24864_12908/1-67",
"URS0001A23BA9_12908/1-63",
"URS0001A232B5_12908/1-59",
"URS0001A235B5_12908/1-65",
"URS0001A23640_12908/1-65",
"URS0001A24874_487796/1-62",
"URS0001A24874_12908/1-62",
"URS0001A233D4_12908/1-61"
] | [
"UAUAUUUUGCCGCG-------------CUAAUUAA----------AAA------------------UUAAUUAG-------------------------------------CUAC-AUAAU-AAUCAUU---UAUAA--CAAUAUUGGCAUG",
"UAGUU-UUGCCACCU------------UA----------------AAU------------------------UA-----------------------------------UCAUAC-AUAAU-AAACAUU---UAAAA--CAAUUUUGGCAUG",
... | rfam_14_5_ref |
URS0001A248B8_12908_1-70 | UAAUUUUGCGCCGUCGAAUCUAAAAAGUUUGGAGCGACUACAUAAAAAUCAUUUAAAUAAUAUUGGCAUG | .............(((..(.............).)))................................. | [
"URS0001A248B8_12908/1-70",
"URS0001A2377D_12908/1-67",
"URS0001A241CD_12908/1-69",
"URS0001A23327_12908/1-61",
"URS0001A2342D_12908/1-59",
"URS0001A24150_12908/1-58",
"URS0001A23CBD_12908/1-60",
"URS0001A23D8D_12908/1-62",
"URS0001A23340_12908/1-68",
"URS0001A249D6_12908/1-68"
] | [
"UAAUU-UUGCGCCG-------------UCGAAUCUAAA-------AAG---------------UUUGGAG-CGA-------------------------------------CUAC-AUAAA-AAUCAUU---UA-AA--UAAUAUUGGCAUG",
"UACCU-UUGCACCGU------------CUUACAAA----------AAG------------------UUUGUAGG-------------------------------------CUAC-AUAAU-AAUUAUU---UUUAU--CAAUAUUGGCAUG",
... | rfam_14_5_ref |
URS0001A248D5_1122610_1-74 | CUGUCGAGGCCACCUUCCCUCCCAAAAUCGCUCCUCGAGAGCGUCUACCCCGGUACCUGACACGGCCGGAGAGA | ((.((((((.......................)))))).))..(((.(.(((((..........))))).)))) | [
"URS0001A248D5_1122610/1-74",
"URS0001A231C5_1380388/1-50",
"URS0001A246C3_1380392/1-50",
"URS0001A23371_1844/1-47",
"URS0001A23CEA_12908/1-45"
] | [
"CUGUCGAGG-------CCACCUUCCCUCCCAAAAUCGCU-------CCUCGAGAGCG-----UCUA-CCCCGGUACCUGACACGGCCGGAG--AGA",
"CGACCCGC--------ACCC---------------------------GCGGGUCGU------CUA--CCCCGGUACCUGACACGGCCGGAG---AG",
"CGACCAGC--------GACC---------------------------GCUGGUCGU------CUA--CCCCGGUACCUGACACGGCCGGAG---AG",
"CGCCCC---... | rfam_14_5_ref |
URS0001A248ED_519442_1-50 | CCUGUUUAGGCAGGUCGGAAUGUGGCCGGCGGAGCCGGCUGAACCACCCA | (((((....)))))..((.....(((((.......)))))...))..... | [
"URS0001A248ED_519442/1-50",
"URS0001A24871_12908/1-50",
"URS0001A242EF_12908/1-50",
"URS0001A24580_12908/1-50",
"URS0001A23F4A_1033806/1-48"
] | [
"CCUGU------------------------------UUAG------------------------------------GCAG-G------UCGGAAUGU-GGCCGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGA------------------... | rfam_14_5_ref |
URS0001A24905_1448860_1-55 | CCCGAGGAAUCGGGACGAAAUGUGGGUCGGCGUCGAACGCCGCCCGAAUCGAAAG | (((((....)))))..((.....(((.(.............))))...))..... | [
"URS0001A24905_1448860/1-55",
"URS0001A23F89_12908/1-55",
"URS0001A2399C_12908/1-55",
"URS0001A23689_12908/1-55",
"URS0001A238CC_469382/1-54"
] | [
"CCCGA------------------------------GGAA------------------------------------UCGG-G------ACGAAAUGU-GGGUCGGCGU-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGA------------------... | rfam_14_5_ref |
URS0001A24912_12908_1-34 | CUCUGUUUCGGCAAACGAUUCAGGGCGGAAAGAG | (((((..(((.....)))..)))))......... | [
"URS0001A24912_12908/1-34",
"URS0001A235DB_1631346/1-32",
"URS0001A239AB_1380372/1-34",
"URS0001A24912_1071072/1-34",
"URS0001A2421D_1408254/1-34",
"URS0001A24912_1200792/1-34",
"URS0001A24912_1393/1-34",
"URS0001A24912_1679167/1-34",
"URS0001A24912_358681/1-34",
"URS0001A24912_1144308/1-34"
] | [
"CUCUGUU-----UCG----------GCAAA------------------CGA-----UUCAGGG-C--GGAAAGAG",
"CUCUGUU-----UCG----------UCU--------------------CGA-----UUCAGGG-C--AAAGUGAG",
"CUCUGUU-----UCA----------GCACA------------------UGA-----UUCAGGG-C--GGAAAGAG",
"CUCUGUU-----UCG----------GCAAA------------------CGA-----UUCAGGG-C--GGAAA... | rfam_14_5_ref |
URS0001A24924_1280674_1-78 | GGGGACGCGUCUUAGAAUCCCCGCAGCCCGAUGGUGUUAAUAGCUCUUUCCAUGGCCGGGAAGAGUGGUUAGUGAAUC | (((((............)))))..............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A24924_1280674/1-78",
"URS0001A23958_12908/1-75"
] | [
"GGGGACGC---GUCUUA----------GAAUCCCC--GCAGCCCGAUGGUGUUAAUAGCU--CU--UUCC----------AUGGCC-GGGAA-GAGUGGUUAGUG-AAUC",
"GGGGA------GAGGCUUAGAA--------UCCCC----GCAGACGGCGUGUUAAUAGCA--GU--GUCU----------UUGGCC-GGGCA-UUGUGGUUAGUG-AAUC"
] | rfam_14_5_ref |
URS0001A24931_1434104_1-54 | CGGGAUGAGAGUCCCGUAGGAGUGUGGCCGAAGUAACUUUGGCUGAACCGUGAA | (((((......)))))..((.....(((((.........)))))...))..... | [
"URS0001A24931_1434104/1-54",
"URS0001A233D1_547558/1-47",
"URS0001A231B9_12908/1-52",
"URS0001A24931_2226/1-54"
] | [
"CGGGAU-----------------------------GAGA-----------------------------------GUCCC-G------UAGGAGUGU-GGCCGAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAA------------------... | rfam_14_5_ref |
URS0001A24937_12908_1-52 | CCUGUAUAACUCAGGUUGGUGCGGGAUGUGGCUUUCACGGCUGAACCGUUAA | ((((.......)))).......((.....((((.....))))...))..... | [
"URS0001A24937_12908/1-52",
"URS0001A23336_12908/1-51",
"URS0001A233AF_12908/1-52"
] | [
"CCUGU------------------------------AUAAC-----------------------------------UCAG-G-UUGGUGCGGGAUGU-GGCU-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUCAC----------------... | rfam_14_5_ref |
URS0001A2493D_1510391_1-66 | CGCCGUGAACCGUGAGGAACUGUCUCCCCUUGCGGAUCCGGAAAAAUAUCACAGAAAAAGAAGGAG | ..(((.((.((((((((..........)))))))).)))))......................... | [
"URS0001A2493D_1510391/1-66",
"URS0001A23A67_338966/1-60",
"URS0001A242DB_12908/1-64",
"URS0001A23808_269799/1-63",
"URS0001A24840_12908/1-56",
"URS0001A23C5E_12908/1-56",
"URS0001A2375B_12908/1-63",
"URS0001A23E53_12908/1-63",
"URS0001A24038_35554/1-63",
"URS0001A24038_12908/1-63"
] | [
"CGCCGUGAACCGUGAGG-----AACUGUCUCCCCUUGCGGAUCCGGAAAAAUAUCACAGAAAAAGA-------------------------------------------------------AGGAG",
"CGCCAAGAACCACGAGG------ACAGUCUCCCCUUGUGGAUCGGGCAAA----------------AUU---------CAU------------GAU-----------------------CAAGGAG",
"GACCGUGAACCGUGAGG-----AAACGUCUCCCCUUGCGGAUCCGGCGAA-... | rfam_14_5_ref |
URS0001A24944_1121923_1-54 | CGCUUGGUGUGCAACUUCGGGUUGUAUAGCGAGGCGGCCUUAAAUAAGAAAGGU | (((((.((..(((((.....)))))...)).))))).................. | [
"URS0001A24944_1121923/1-54",
"URS0001A2407A_1127673/1-51",
"URS0001A23B96_12908/1-52",
"URS0001A23EA7_1085623/1-52",
"URS0001A23460_1121922/1-53",
"URS0001A242C4_12908/1-52",
"URS0001A24757_1129793/1-51",
"URS0001A23B6C_12908/1-51",
"URS0001A24243_493475/1-51",
"URS0001A24226_12908/1-51"
] | [
"CGCUUGGUGUGCAA-C-------------------UUCGG------------------------------G--UUGU-AUAGCGAGGCGGCCUUAAAUAAGA-AAGGU",
"CGUAUGGUGUGCAA-C-------------------UUCGG------------------------------G--UUGU-AUAGCGAUACGGCCCAGAAAU----GAGGU",
"CGUAUGGUGUGCAA-C-------------------UUCGG------------------------------G--UUGU-AUAGCGAUG... | rfam_14_5_ref |
URS0001A24954_1122999_1-50 | UCGGUGCCGGUUCACGCCGCCCUUCGGGGCUUCGAUGGCGACCCGGCGCC | ..(((.((((....((((..................))))..)))).))) | [
"URS0001A24954_1122999/1-50",
"URS0001A2430E_12908/1-49",
"URS0001A235CB_12908/1-41",
"URS0001A233C6_12908/1-43",
"URS0001A241F6_1210045/1-45",
"URS0001A24763_1463845/1-45",
"URS0001A24247_1437610/1-47",
"URS0001A2346C_12908/1-45",
"URS0001A24427_12908/1-45",
"URS0001A23329_1449048/1-42"
] | [
"UCGG-UGCCGGUUCACGCC------GCCC-------------------UUCG---------------------------------------------------------------GGGCUUCGAUGGCGACCCGGC--GCC",
"UCGG-UACCGGUUCACGUC-CCGCCC----------------------ACGG------------------------------------------------------------------GGGCGGCGACGACCCGGCG--CC",
"CAGG-UUCCGGUUCACGUCAU... | rfam_14_5_ref |
URS0001A2495F_12908_1-106 | UGAUAGCUAAGAAGCGGAGGUUGCCGAGAAAACUGUGAAUUCAGGUUUUUGGGUUUUUCGUGGAGCGAAUGUCAAGAGACCGAAAGGUCUGUAAACCUGGCGACAA | .............(((((((...(((((...................)))))..)))))))........((((....((((....))))............)))). | [
"URS0001A2495F_12908/1-106",
"URS0001A23B84_12908/1-105",
"URS0001A248BF_12908/1-105",
"URS0001A2495F_592026/1-106"
] | [
"UGAUAGCUAAGAAGCG-G-AGGUUGCCGAGAAAA-------------------CUG-----------UGAAUU-----------------CAGGUU----UUUGG-GU--U-UUU-CGUGGAGCGAAUGUCAAGA---G--ACCGAA-A----------------GGUCUGUAAACCUGGC--GACAA",
"UGAUAGCUAAGAAGCG-G-AGGUUGCCGAGAA---------------------UACU----------GCAAA-----------------AGUGGGU----UUUGG-GU--U-UUU-CGUGG... | rfam_14_5_ref |
URS0001A2497C_12908_1-42 | CUCUGGCGCUGGACAAAGAGCUUGAUCACCAGGGCAAAGGAG | ((((((......................))))))........ | [
"URS0001A2497C_12908/1-42",
"URS0001A245C9_360094/1-35",
"URS0001A245C9_1094181/1-35",
"URS0001A248A2_1133569/1-33",
"URS0001A2438F_12908/1-35"
] | [
"CUCUG-------GCGCUGGACAA--AGAGC----------UUGAUCA---C-------CAGGG-C---AAAGGAG",
"CUCUGU------GGUAA--------AAA------------------UUGCU----CAACAGGG-C---AAAGGAG",
"CUCUGU------GGUAA--------AAA------------------UUGCU----CAACAGGG-C---AAAGGAG",
"CUCUGGC-----UCA----------GCAAA------------------UGA-----ACCAGGG-C---AAAG... | rfam_14_5_ref |
URS0001A24985_12908_1-64 | GUGAUGUCGGCAAGGGUGGACGAUGCGGCCCGAGUCCUGGUAACAGGAUAAGCCGAAAGAUCAC | (((((.(((((..((((...((...))))))..(((((......)))))..)))))...))))) | [
"URS0001A24985_12908/1-64",
"URS0001A240EF_12908/1-62",
"URS0001A23EB6_12908/1-64"
] | [
"GUGAU---GUCGGC-AA---GGGUGGAC---G-------AUG-------------C-G-GCCCGA----GUCCU-------------------------GGUAAC--------------------------------------A-GGAUAA----GCCGAAAG-------AUCAC",
"GUGAU--GACGGC--AA---GGGUGGAC---G-------AUG-------------C-G-GCCCGA----AUCC--------------------------UUAACC-----------------------------... | rfam_14_5_ref |
URS0001A24988_1137258_1-57 | CUGGUUCCGGUUCACGUCCGAUCCGUCGCACAUCCGCGAUCGGGCGACCCGGCGACC | ..(((.((((....((((((((................))))))))..))))..))) | [
"URS0001A24988_1137258/1-57",
"URS0001A2322C_12908/1-48",
"URS0001A232EF_12908/1-41",
"URS0001A2324A_12908/1-55",
"URS0001A235DA_12908/1-53",
"URS0001A236AF_12908/1-51",
"URS0001A23D56_419479/1-48",
"URS0001A238CE_12908/1-49",
"URS0001A24362_12908/1-51",
"URS0001A23625_1121927/1-47"
] | [
"CUGG-UUCCGGUUCACGUCCGAUC-CG---------------------UCGCACAUC------------------------------------------------------------CGCGAUCGGGCGACCCGGCG-ACC",
"UCGG-UUCCGGUUCACGUC--GCGC-----------------------AAGCCC-----------------------------------------------------------------GCGCUGGACGACCCGGG--ACU",
"AUGG-UUCCGGUUCACCCGCC... | rfam_14_5_ref |
URS0001A24997_325240_1-55 | CAUGUGGUGUCCGACUACGGGUUGGAAGAGCGACAUGGCCUUACACUUUUGAGGU | (((((.((.((((((.....))))))...)).))))).................. | [
"URS0001A24997_325240/1-55",
"URS0001A23DED_1123497/1-52",
"URS0001A24412_319224/1-54",
"URS0001A24412_327275/1-54",
"URS0001A24997_12908/1-55",
"URS0001A23612_326297/1-53",
"URS0001A24218_211586/1-51",
"URS0001A24218_1339231/1-51",
"URS0001A233C1_12908/1-55",
"URS0001A24493_392500/1-53"
] | [
"CAUGUGGUG-UCCGAC-------------------UACGG------------------------------G-UUGGA-AGAGCGACAUGGCCUUACACUUUU-GAGGU",
"CAUGUGGUGUCCGG-C-------------------AAC--------------------------------GAUCCGG-AUAGCGACAUGGCCCGAUUUUU---GAGGU",
"CAUGUGGUG-UCCGAC-------------------UAAGG------------------------------G-UUGGA-AGAGCGACA... | rfam_14_5_ref |
URS0001A249A0_12908_1-66 | UCGGUUCCGGUUCACGCCAGGGGGUUCAUCCAGCCCCAUCAGUUUUGCCAUCGGCGACCCGGAGCC | ..(((.((((....((((.(.(..........................).).))))..)))).))) | [
"URS0001A249A0_12908/1-66",
"URS0001A23B6D_12908/1-62",
"URS0001A234F3_1035308/1-59"
] | [
"UCGG-UUCCGGUUCACGCCAGGG-------------------------GGUUCAUCCAGCCCCAUCAGUUUUGC-----------------------------------------------CAUCGGCGACCCGGA--GCC",
"UCGG-UUCCGGUUCACGCC------GC---GGGGC-------------GCAUCCA------------------------------------------------------GCCCCUCAGCAAAGAUGGCGACCCGGU--GCC",
"UCGG-UUCCGGUUCACGCC--... | rfam_14_5_ref |
URS0001A249B4_12908_1-94 | CUGAUGGCGGCGUCUGGGUGGAAAUCGGAAUCAAUCGCCCAAUUCCCCUUCGCACCGGAGAAAAGUUCCCGGUAGGGCAGCGCCUAAGUGUCAG | (((((...(((((..((((...(.(.(....).)).)))).....(((((.....(((.((.....)))))).))))..))))).....))))) | [
"URS0001A249B4_12908/1-94",
"URS0001A2345A_12908/1-94",
"URS0001A24063_12908/1-94",
"URS0001A249A8_12908/1-94",
"URS0001A23667_12908/1-94",
"URS0001A248FC_12908/1-94",
"URS0001A24128_12908/1-94",
"URS0001A243A4_12908/1-94",
"URS0001A23430_12908/1-94",
"URS0001A2366F_12908/1-94"
] | [
"CUGAU-GGCGGCGUCU----GGGUGGAA---AUCG----GAAU---------CAA--UCGCCCAAUUC-CCCUUCGCAC-CGGAGAA------------AAG----------------------UUC-CCG------------GUAGGGCA----GCGCCUAAGU-----GUCAG",
"CUGAU-GGCGGCGUCU----GGGUGGAA---AUCG----GAAU---------CAA--UCGCCCUAU---UCCCCUUCG--CACCGG-------------AGAAAAGUAC----------------UCGGUG---... | rfam_14_5_ref |
URS0001A249B6_1224136_1-54 | CGCGUGGUGUCUGGCGUUAGGGCUGGAAGAGCGACGCGGCCUUCAGAUUGAGGU | (((((.((.((((((......))))))...)).)))))................ | [
"URS0001A249B6_1224136/1-54",
"URS0001A246F2_29488/1-54",
"URS0001A23821_1224318/1-54",
"URS0001A23247_12908/1-53",
"URS0001A240A0_12908/1-53",
"URS0001A23AA5_12908/1-52",
"URS0001A24120_1159613/1-52",
"URS0001A2365A_413503/1-52",
"URS0001A2365A_1208664/1-52",
"URS0001A2365A_1074000/1-52"
] | [
"CGCGUGGUG-UCUGGC-------------------GUUAGG-----------------------------G-CUGGA-AGAGCGACGCGGCCUUCAGAUU---GAGGU",
"CGUGUGGUGUCUGG-C-------------------GGCAACAGG--------------------------G--CUGG-AUAGCGACGCGGCCUUAACA-----GAGGU",
"CGCGUGGUG-UCUGGC-------------------GUUAGG-----------------------------G-CUGGA-AGAGCGACG... | rfam_14_5_ref |
URS0001A249B9_12908_1-69 | UACUUUUGCAACCGUCUAAACCGAGAGUCGGUGUGGCUACAUAAAAAUUAUUUAUACAAUAUUGGCAUG | ...............(((.((.........)).)))................................. | [
"URS0001A249B9_12908/1-69",
"URS0001A2482E_12908/1-69",
"URS0001A242D0_1406840/1-63",
"URS0001A2487E_12908/1-65"
] | [
"UACUU-UUGCAACCGU-----------CUAAACCGA---------GAG-----------------UCGGUGUGG-------------------------------------CUAC-AUAAA-AAUUAUU---UA-UA--CAAUAUUGGCAUG",
"UAUAU-UUGCACCC-------------GCUAUUCA----------UAUGAGU--------------UGAGUGGC--------------------------------------UAC-AUAAA-AAUUAUU---UAAUC--AAAUAUUGGCAUG",
... | rfam_14_5_ref |
URS0001A249C0_12908_1-68 | UGGGUUCCGGUUCACGCCGCGCCUGCCUCGUUUCGACGGGGCAGGCGGAAGACGGCGACCCGGCGACC | ..(((.((((....(((((.................................)))))..))))..))) | [
"URS0001A249C0_12908/1-68",
"URS0001A2380A_1206723/1-50",
"URS0001A23279_1206735/1-56",
"URS0001A24345_1194972/1-52"
] | [
"UGGG-UUCCGGUUCACGCCG-----CGCCUGCCUCGU-----------UUCG-------------------------------------------------------ACGGGGCAGGCGGAAGACGGCGACCCGGCG-ACC",
"UCGG-UUCCGGUUCACGCUUCGCGCG----------------------AAUU------------------------------------------------------------------CGCGUG-GGCGACCCGGCG-ACC",
"UCGG-UUCCGGUUCACGCUCA... | rfam_14_5_ref |
URS0001A249C1_12908_1-51 | GCGGGAUACGUCCCGCCGGAAUGUGGCUUAAGACCUAAGCUGAACCAUGAA | (((((......))))).((.....(((((.......)))))...))..... | [
"URS0001A249C1_12908/1-51",
"URS0001A237AE_12908/1-50",
"URS0001A24654_1094980/1-46",
"URS0001A24380_12908/1-46",
"URS0001A24146_12908/1-49",
"URS0001A23E91_1122233/1-46"
] | [
"GCGGGA-----------------------------UACG-----------------------------------UCCCG-C-------CGGAAUGU-GGCUUA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACC----------------... | rfam_14_5_ref |
URS0001A249DA_12908_1-91 | CCUGUCUACGCAGGUCGGGAUGUGAUUCGCGUUCGUGGCCGACGGCCGCGAGGAGGCGGCACCGCCGCCGAAACGGGAAUUGAACCACACA | (((((....)))))..((.....(((((................................................)))))...))..... | [
"URS0001A249DA_12908/1-91",
"URS0001A23819_12908/1-82",
"URS0001A242CB_12908/1-81",
"URS0001A2374F_12908/1-80"
] | [
"CCUGU------------------------------CUAC------------------------------------GCAG-G------UCGGGAUGU-GAUUCGCGUUCGUGGCCGACG--GCCGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGAG---------------... | rfam_14_5_ref |
URS0001A249F3_12908_1-35 | CUCUGGGUCCGACUGUUGAUCCAGGGCAGAAAGAG | ((((((((..........))))))))......... | [
"URS0001A249F3_12908/1-35",
"URS0001A244A9_1121347/1-34",
"URS0001A23FF1_1590652/1-35",
"URS0001A248EA_12908/1-34",
"URS0001A2349B_1126833/1-35",
"URS0001A236DC_1122920/1-34",
"URS0001A2326F_1122924/1-35",
"URS0001A236DC_1684143/1-34",
"URS0001A23BD0_684063/1-34",
"URS0001A24331_1243662/1-34"
] | [
"CUCUG-------GGUC---------CGACUGUU--------------GAUC-------CAGGG-C--AGAAAGAG",
"CUCUG-------GAUCCG-------CAUG----------------UGG-UU-------CAGGG-C--AGAAAGAG",
"CUCUG-------AAUCCG-------CCUG----------------UUGAUU-------CAGGG-C--AGAAAGAG",
"CUCUG-------CGUC---------CGCAUGC---------------GAUG-------CAGGG-C--AGAAA... | rfam_14_5_ref |
URS0001A249FD_12908_1-33 | GGUUACACAACAACUUCUCUGUAAUCGCGGCAG | (((((((............)))))))....... | [
"URS0001A249FD_12908/1-33",
"URS0001A244A6_12908/1-33",
"URS0001A2351B_12908/1-33",
"URS0001A235C7_12908/1-33",
"URS0001A23337_12908/1-33",
"URS0001A23337_1123008/1-33",
"URS0001A239AD_1121099/1-31",
"URS0001A2437C_12908/1-32"
] | [
"GGUUACA--------------------------------CAACAACUUCUC---UGUAAUCGCGG-CA-G",
"GAUUACA--------------------------------CUUCAACUUCUC---UGUAAUCGCGG-CU-G",
"GAUUACA--------------------------------AUACAACUUCUC---UGUAAUCGCGG-CU-G",
"GAUUACA--------------------------------ACACAACUUCUC---UGUAAUCGCGG-CU-G",
"GAUUACA----... | rfam_14_5_ref |
URS0001A24A02_12908_1-68 | UAUCUUUGCACCCGCUACUCAAACGACUUGAGUACGUACAUAAAAAUUAUUUAUACAAUAUUGGCAUG | ...............(((((.........))))).................................. | [
"URS0001A24A02_12908/1-68",
"URS0001A243CA_12908/1-56",
"URS0001A2467B_12908/1-56",
"URS0001A243AA_12908/1-56",
"URS0001A248E1_12908/1-56",
"URS0001A248F1_12908/1-56"
] | [
"UAUCU-UUGCACCCG------------CUACUCAA----------ACGAC----------------UUGAGUAC-------------------------------------GUAC-AUAAA-AAUUAUU---UA-UA--CAAUAUUGGCAUG",
"UAUAU-UUGCAACU-------------UC----------------AAACA----------------------GG-------------------------------------AUAC-AUAAA-AACUAUU---AAAAC--UAAUAUUGGCAUG",
... | rfam_14_5_ref |
URS0001A24A04_12908_1-78 | GGGCACCUGCGGACUUCGGUCGAGGGGCCUUACAACAUGAGGCAGGGCAACCUGCCGCAAAGCAACGGAAGACAGAAA | ((((.(((...............)))))))..........((((((....))))))...................... | [
"URS0001A24A04_12908/1-78",
"URS0001A24115_12908/1-61",
"URS0001A240FC_12908/1-68",
"URS0001A231E9_571166/1-65",
"URS0001A238B9_12908/1-65",
"URS0001A23DCC_12908/1-65",
"URS0001A23D18_12908/1-62",
"URS0001A24777_12908/1-66",
"URS0001A23271_12908/1-62",
"URS0001A23214_1185766/1-68"
] | [
"GGGC-ACCU--GCGGACUUCGGUCGA--------------------GGG----GCC-UUACAACAUGA----GGCAG-----------G---------------------------GCAA----------------------------------------------------------------------------C-----------------------C-UGCCG--C--AAAGC--AACGGA-AGACAGA-AA",
"GGGG-ACCU--UCG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A24A0E_12908_1-76 | CGCACAUUAUGUGCUGGCUAAGGUAAGUCCGACGUGCUUCUUCAGCACUGCUCCUUUUGGGGGGGCUUGGGAUUAC | .(((((...)))))........((((..((...(((((.....))))).(((((.......)))))...)).)))) | [
"URS0001A24A0E_12908/1-76",
"URS0001A23FDB_12908/1-74"
] | [
"CGCACA-------UUA------------------UGUGCU---GGCUAAGGUAAGUCCGA--CGUGCUUCUUC----------------------------------------------AGCACUGCUCCUU-----UUG--------------GGGGGGCU-UGGGAUUAC",
"UGCACA-------UCA------------------UGUGCU---GGCUGAGGUAAGUCCGA--CGUGCUCAAGU----------------------------------------------AGCACUGCCCU-------... | rfam_14_5_ref |
URS0001A24A14_1232219_1-75 | CCUGCGUGCGAUGUUCGCAUUGCAGGUCGGAAUGUGGCCAGCGUGGUCCAUCGGGCCACGCGGCUGAACCACCAA | (((((................)))))..((.....((((......................))))...))..... | [
"URS0001A24A14_1232219/1-75",
"URS0001A23288_1227455/1-67",
"URS0001A23BB7_1227456/1-68"
] | [
"CCUGCG-UGCGA-----------------------UGU------------------------------UCGCAUUGCAG-G------UCGGAAUGU-GGCCAGCGUGGUCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUC------------------... | rfam_14_5_ref |
URS0001A24A1B_12908_1-94 | CUGAUAAAGGCGUCUGGGUGGAAAUCGGAGUUGAUCGCCCAAUACCCCUAGUGUCGAAAGAGAUAUACAAGCCGGGGCAACGCCUAAAUGUCAG | (((((...(((((..((((...(.(((....)))).))))....((((..(((((......))))).......))))..))))).....))))) | [
"URS0001A24A1B_12908/1-94",
"URS0001A236D8_12908/1-94"
] | [
"CUGAU-AAAGGCGUCU----GGGUGGAA---AUCG----GAGU---------UGA--UCGCCCAAUA--CCCCUA-----GUGUC--------------GAAAGA---------------------GAUAU------ACAAGCC-GGGGCA----ACGCCUAAAU-----GUCAG",
"CUGAU-AAAGGCGUCU----GGGUGGAA---AUCG----GAGU---------CGAU--CGCCCUG----UGCCC------CUCGUC-------------ACA-----------------------GACGAGAAA... | rfam_14_5_ref |
URS0001A24A2E_12908_1-31 | GAUUGUAUUAAACCUCUCGCAAUCGCGGCUG | ((((((............))))))....... | [
"URS0001A24A2E_12908/1-31",
"URS0001A23277_12908/1-31",
"URS0001A23C4D_12908/1-31",
"URS0001A23858_12908/1-31"
] | [
"GAUUGU---------------------------------AUUAAACCUCUC----GCAAUCGCGG-CU-G",
"GAUUGC---------------------------------AUAAAUCCUCUC----GCAAUCGCGG-CA-G",
"GAUUGUA----------------------------------AAUUCUUCUC---UACAAUCGCGG-CU-G",
"GAUUGUA----------------------------------AUUUCUUCUC---UACAAUCGCGG-CU-G"
] | rfam_14_5_ref |
URS0001A24A30_12908_1-63 | UGGACACGCGAAACAAGUGCAGUUCAACACGGCUGACGCCGGUACCUGAUACGGCCGGCGCAG | (((((................)))))......(((.(((((((..........)))))))))) | [
"URS0001A24A30_12908/1-63",
"URS0001A235DF_1507734/1-50",
"URS0001A24392_1158056/1-50",
"URS0001A24392_576784/1-50",
"URS0001A24325_67256/1-57",
"URS0001A23A2E_44060/1-57"
] | [
"UGGAC-----------ACGCGAAACAAGUGCA------------------GUUCAACACGG-CUGA-CGCCGGUACCUGAUACGGCCGGCG--CAG",
"ACAG------------GCUGGAUU---------------------------UUGUUCA----CUGA-CACCGGUACCUGAUACGGCCGGUG--CAG",
"ACGG------------GCUGGAUU---------------------------UUGUUCA----CUGA-CACCGGUACCUGAUACGGCCGGUG--CAG",
"ACGG-----... | rfam_14_5_ref |
URS0001A24A3C_12908_1-92 | CUCGCCGCCGAGUCGAGUCCCGGUCCAUCGUGGGCCGUGGUCGAUGACUCGGGACGAGACGAGAUGUGGCCGCCUCGCGGCUGAAUCGCAAG | ((((..................................................))))..((.....(((((.....)))))...))..... | [
"URS0001A24A3C_12908/1-92",
"URS0001A24868_1227485/1-83",
"URS0001A24945_1227481/1-83"
] | [
"CUCGCCGCCGAGUCG-AGUCC-CGGUCCA------UCG-------------UGGGCCGUGGUCGAUGACUCGG-GACGA-G------ACGAGAUGU-GGCCGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUC------------------... | rfam_14_5_ref |
URS0001A24A44_12908_1-77 | GGGGAUGUGCUUAGAGUCCCCAGGAUGUGGCGUGUUAAUAGAGGUAUUCUGUGGCCGGAAGCCUUGGUUAGUGAAUC | ((((((.........)))))).............(((((.(((((.((((......))))))))).)))))...... | [
"URS0001A24A44_12908/1-77",
"URS0001A24145_12908/1-74"
] | [
"GGGGAU-----GUGCUUAGA---------GUCCCC---AGGAUGUGGCGUGUUAAUAGAG--GUA-UUCU----------GUGGCC-GGAAG-CCUUGGUUAGUG-AAUC",
"AUGGGGAGU--UCUU-----------AGACCCCAU------GGAUGUCGUGUUAAUAGCC--GU--GCUU----------UUGGCC-GAGUG-CGGUGGUUAGUG-AAUC"
] | rfam_14_5_ref |
URS0001A24A5A_12908_1-76 | AGAGUCACCCUUAAGGUGCUCUUUUUCUGCGUGUUAAUAGCUUUUCUCAUUGGCCUGUGAAAGCGGUUAGUGAAUC | ((((.(...........)))))...........(((((.(((.(((.((......)).)))))).)))))...... | [
"URS0001A24A5A_12908/1-76",
"URS0001A23365_12908/1-73",
"URS0001A244C4_12908/1-70",
"URS0001A233DF_12908/1-73"
] | [
"AGAGUCACC--CUUAA----------GGUG-CUCU-----UUUUCUGCGUGUUAAUAGCUU-UU--CUCA----------UUGGCC-UGUGA-AAGCGGUUAGUG-AAUC",
"GAGCC------CCUUAAAA-----------GGCUC----AUUAUCUGCGUGUUAAUAGCUU-UU--CUCA----------UUGGCC-UGGGA-AAGUGGUUAGUG-AAUC",
"AGCCC------UUAAU--------------GGGCU---CUCUUUCUGCGUGUUAAUAGCUU-UU--CUC-----------UUG... | rfam_14_5_ref |
URS0001A24A6E_12908_1-80 | GAUAUGCGAUGAUGCAGAAGGUGGCCGCCCCUUGAGGCGGGGAAUUUCUGCGGAGUAUGUCCGAUUUACAAACCGGGCGA | .............(((..(((...(((((......)))))....))).)))......((((((..........)))))). | [
"URS0001A24A6E_12908/1-80",
"URS0001A2401D_12908/1-77",
"URS0001A248DB_12908/1-74"
] | [
"GAUAUGCGAUGAUGCAGA-AGGUGGCCGCCCCUUGA----------------------------------------------------------------GGCGG-GGAAU-UUC-UGCGGAGU--AUGUC-------C--G--AUUUACAAAC-------------CG--------------GGCGA",
"---AUGCGAUGAUGCA-GAAGGUGGCCGUCCUUUGA----------------------------------------------------------------GACGG-GGAAU-UUC-UGCGG... | rfam_14_5_ref |
URS0001A24A71_12908_1-31 | GAUUACAAUUUCCUUUCUGUAAUCGCGGCUG | (((((((..........)))))))....... | [
"URS0001A24A71_12908/1-31",
"URS0001A24395_12908/1-29",
"URS0001A23DEF_12908/1-31",
"URS0001A241C3_679937/1-31"
] | [
"GAUUACA----------------------------------AUUUCCUUUC---UGUAAUCGCGG-CU-G",
"GAUGCC-----------------------------------ACUCCUUUCC----GUAAUCGCGG-CU-G",
"G-AUUGCA----------------------------------UUUCCUUUC--UGUAAUUCGCGG-CU-G",
"GAUUACA----------------------------------UCUUCUUCUC---UGUAAUCGCGG-CU-G"
] | rfam_14_5_ref |
URS0001A24A79_12908_1-77 | GGGAAUACGCUUAGGAUUCUCAUAGCGUGGUCGUGUUAAUAGUUCUUCUUUUGGCCGAGGAGAGCGGUUAGUGAAUC | ((((((.........))))))..............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A24A79_12908/1-77",
"URS0001A24A79_1115809/1-77",
"URS0001A24A79_1122980/1-77",
"URS0001A23C3D_12908/1-77"
] | [
"GGGAAUAC---GCUUAG----------G-AUUCUC--AUAGCGUGGUCGUGUUAAUAGUU--CU--UCUU----------UUGGCC-GAGGA-GAGCGGUUAGUG-AAUC",
"GGGAAUAC---GCUUAG----------G-AUUCUC--AUAGCGUGGUCGUGUUAAUAGUU--CU--UCUU----------UUGGCC-GAGGA-GAGCGGUUAGUG-AAUC",
"GGGAAUAC---GCUUAG----------G-AUUCUC--AUAGCGUGGUCGUGUUAAUAGUU--CU--UCUU----------UUG... | rfam_14_5_ref |
URS0001A24A85_12908_1-82 | CUGAUCGAGACGUUGGGCCAACGCCAGUGCAGCGCGCCCGGUUCCAGAGAAGAAUAUCUCUCCGGAAACGUCGAAGAGUCAG | (((((...(((((.((((...(((.......))).))))..((((.((((........)))).))))))))).....))))) | [
"URS0001A24A85_12908/1-82",
"URS0001A23F03_12908/1-79",
"URS0001A24A94_12908/1-79",
"URS0001A2422E_12908/1-79",
"URS0001A23BE2_12908/1-80",
"URS0001A23B65_12908/1-79",
"URS0001A249C4_12908/1-79",
"URS0001A242E9_12908/1-79",
"URS0001A2476D_12908/1-80",
"URS0001A23843_12908/1-79"
] | [
"CUGAU-CGAGACGU-U----GGGCCAAC---GC------CAGUGCA--------GC-GCGCCCGG----UUCCA------GAGA---------------AGAAUAUC--------------------UCUC------------C-GGAA------ACGUCGAAGA-----GUCAG",
"CUGAU-CGAGACGA-U----GGGCCAAC---GC------CAGUGCA--------GC-GCGCCCGG----UUCCG------GGAA---------------CACUC-----------------------UUUC---... | rfam_14_5_ref |
URS0001A24A87_1628856_1-26 | UCCGUUGCUGGGUCGCCUGUAGCGGA | ((((((((.((....)).)))))))) | [
"URS0001A24A87_1628856/1-26",
"URS0001A238F5_1121018/1-26",
"URS0001A238CA_1214065/1-25",
"URS0001A23899_1223569/1-26",
"URS0001A23899_1225785/1-26",
"URS0001A23AC1_1336237/1-26",
"URS0001A23AC1_1005995/1-26",
"URS0001A23AC1_480813/1-26",
"URS0001A23899_1224149/1-26",
"URS0001A24282_1216966/1-26"
... | [
"UCCGUUGC-UGGGUC-GCCUGUAGCGGA",
"UCUGCUAC-UGGGUC-GCCUGUCGCAGA",
"-CCGCUGC-UGGGUC-GCCUGUAGCGGU",
"CCUGUUGC-UGGGUC-GCCUGUAACAGG",
"CCUGUUGC-UGGGUC-GCCUGUAACAGG",
"UCUGUUGC-UGGGUC-GCCUGUAACAGA",
"UCUGUUGC-UGGGUC-GCCUGUAACAGA",
"UCUGUUGC-UGGGUC-GCCUGUAACAGA",
"CCUGUUGC-UGGGUC-GCCUGUAACAGG",
"UCUGCUGC-... | rfam_14_5_ref |
URS0001A24A98_12908_1-28 | UAACCUCUGGCGAUGUUCGUGAACGUUG | ((((...(.((((...))))..).)))) | [
"URS0001A24A98_12908/1-28",
"URS0001A24699_12908/1-28",
"URS0001A23776_12908/1-28",
"URS0001A23358_12908/1-28",
"URS0001A2353F_12908/1-28",
"URS0001A243B7_12908/1-28",
"URS0001A23ADB_12908/1-28",
"URS0001A23351_12908/1-28",
"URS0001A248BD_12908/1-28",
"URS0001A23930_12908/1-28"
] | [
"UAACCUCUGGCGA-UGU--------UCGUGAACGUUG",
"UAACCUCUGGCG--AUGUC-------CGUGAAUGUUA",
"CAACCUCUGGCA--AGAGA-------UGUUAACGUUG",
"CAACCUCUGGCG--AUGUA-------CGUGUAUGUUG",
"CAACCUCUGGCGA-GCA--------UCGUGAACGUUG",
"CAACCUCUGGCGA-AGU--------UCGCGAAUGUUG",
"CAACCUCUGGCG--AGGGA-------CGUGAAUGUUG",
"UAACCUCUGGCG--... | rfam_14_5_ref |
URS0001A24AD5_12908_1-75 | CUGGGAACAGCACAGCCGCAUAUCCGACUUCGUCGCGCAGGCCUCGCGCCUCGCGGCUUGGGAGUGCGGACGUGC | .........((((..((((((..((......((((((..............))))))...)).))))))..)))) | [
"URS0001A24AD5_12908/1-75",
"URS0001A23DAF_12908/1-66",
"URS0001A244BE_12908/1-71",
"URS0001A248C4_12908/1-71",
"URS0001A248C4_1230455/1-71",
"URS0001A248C4_1194088/1-71",
"URS0001A248C4_1227468/1-71",
"URS0001A248C4_1227483/1-71",
"URS0001A23907_1498500/1-71",
"URS0001A24703_12908/1-72"
] | [
"CUGGGAACAGCACAGCCGCAUAUCCGACUUCGUCGCGCAGGC------------------------------CUCGC-------------------------------------------------GCCU-CGCGGC-U-U-GGGAGUGCGGACGUGC",
"AUGGGAACAGCACAGCCGCAUAUCCGACCU-GCCGCCC----------------------------------GUUC------------------------------------------------------GGGUGGC-U-U-GGGAGUGCG... | rfam_14_5_ref |
URS0001A24AD7_12908_1-77 | GGGGAAAACACUUAGAAUCCCCGUGGACUAGAGUGUGAAUAGCAACGUCUUUGGCCGGACGUCGUGGUUCGGGAAUC | (((((............))))).............(((((.((.((((((......)))))).)).)))))...... | [
"URS0001A24AD7_12908/1-77",
"URS0001A2340A_12908/1-76",
"URS0001A235A0_12908/1-77",
"URS0001A23ED7_12908/1-75",
"URS0001A2424C_12908/1-76",
"URS0001A2370A_12908/1-77",
"URS0001A23919_12908/1-76",
"URS0001A23A81_12908/1-76",
"URS0001A24062_12908/1-76",
"URS0001A237AF_12908/1-76"
] | [
"GGGGA------AAACACUUAGAA-------UCCCC---GUGGACUAGAGUGUGAAUAGCA--AC--GUCU----------UUGGCC-GGACG-UCGUGGUUCGGG-AAUC",
"GGGGAAACU--CUU------------AGAAUCCCC---GUGAACAGGGGUGUGAAUAGCG--GC--GUCU----------UUGGCC-GGGCG-AAGCGGUUCGUG-AAUC",
"GGGGAUAC---ACUUA-----------GAGUCCCC---UGGAUAGCGUGUGUUAAUAGCAA-CG--UCCU----------GUG... | rfam_14_5_ref |
URS0001A24ADC_12908_1-53 | CGGGAAUGCGCCCGCAGGGAUGUGACUGCGAAAAAAAGCAGUUGAACCAUAAA | ((((......))))..((.....(((((..........)))))...))..... | [
"URS0001A24ADC_12908/1-53",
"URS0001A23EC9_12908/1-52"
] | [
"CGGG-------------------------------AAUGCG-----------------------------------CCC-G------CAGGGAUGU-GACUGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAAA-------------... | rfam_14_5_ref |
URS0001A24ADF_12908_1-74 | GGGGACCUGUCACAGGGGCCCUAUAAACCACCGGCGGGCAAAUUCCCGUCGGCCAAGCAAACGGAAGACAGAAA | ((((.(((.......)))))))........(.(..(((......))).).)....................... | [
"URS0001A24ADF_12908/1-74",
"URS0001A24264_12908/1-64",
"URS0001A2344E_12908/1-64",
"URS0001A246D8_12908/1-67",
"URS0001A23CF4_366616/1-72",
"URS0001A2416F_12908/1-70",
"URS0001A23EE7_12908/1-66",
"URS0001A23D2E_12908/1-66",
"URS0001A23EDA_12908/1-66",
"URS0001A238EA_1294273/1-62"
] | [
"GGGG-ACCU--GUCACAG----------------------------GGG----CCC-UAUAAACCA------CCGGC-----------GGGC------------------------AAAU-------------------------------------------------------------------------UCCC-------------------------GUCGG--C--CAAGC-AAACGGA-AGACAGA-AA",
"GGGG-AGC---UUCGGC------------------------------GCCCUA... | rfam_14_5_ref |
URS0001A24AEB_1401073_1-76 | GGGGAAUUUUCUUAGAACCCCAUACGAUACGUGUUAAUAGUGUUGUCUUUGGCCGGGCAGCAUGGUUAGGUCAAGC | ((((.............))))............(((((.(((((((((......))))))))).)))))....... | [
"URS0001A24AEB_1401073/1-76",
"URS0001A23653_28125/1-74",
"URS0001A248DE_1122993/1-74",
"URS0001A23D54_649761/1-74",
"URS0001A23F78_12908/1-74",
"URS0001A247E2_12908/1-75",
"URS0001A232AA_12908/1-75",
"URS0001A23567_1236518/1-75",
"URS0001A23567_12908/1-75",
"URS0001A2470A_1227276/1-75"
] | [
"GGGG-------AAUUUUCUUAGAA-------CCCC----AUACGAUACGUGUUAAUAGUG--UU--GUCU----------UUGGCC-GGGCA-GCAUGGUUAGGUCAAGC",
"GGGAUUUU---CUU-------------AGAAUCCC----AUACGUUACGUGUUAAUAACA--UA--GUCU----------UUGGCC-GGGCU-AUGUGGUUAGGAAAAGC",
"GGGGUACU---CUU-------------AGAGCCCC----AUACGAUGCAUGUUAAUAGUG--UU--GUCU----------UUG... | rfam_14_5_ref |
URS0001A24AF8_987045_1-48 | UUGGUUCCGGUUCACGGUUCGGCACCCUGCCGCACCGACCCGGCGGCC | ..(((.((((....((((.(((.......))).))))..))))..))) | [
"URS0001A24AF8_987045/1-48",
"URS0001A2493C_12908/1-42",
"URS0001A236E2_12908/1-39",
"URS0001A247E4_12908/1-39",
"URS0001A23406_12908/1-39",
"URS0001A23B53_1120935/1-39"
] | [
"UUGG-UUCCGGUUCACGGUUCGGCA-----------------------CCC--------------------------------------------------------------------UGCCGCACCGACCCGGCG-GCC",
"UUGG-CUCCGGUUCACGAC-----------------------------GCGUGACCA--------------------------------------------------------------------GUCGACCCGGCG-GCC",
"CCGG-CACCGGUUCCCGUG--... | rfam_14_5_ref |
URS0001A24B0C_12908_1-60 | GAAAGGCUGCCAUAUUUCGCCAUCCGGCAGCUGGGUGCAUACCGAGACACCCCAAUUAGG | ....(((((((..............)))))))(((((..........)))))........ | [
"URS0001A24B0C_12908/1-60",
"URS0001A23289_12908/1-48",
"URS0001A233CC_12908/1-56",
"URS0001A23363_12908/1-52",
"URS0001A236A8_12908/1-57",
"URS0001A23940_12908/1-57",
"URS0001A238F8_12908/1-57",
"URS0001A238F8_1226324/1-57",
"URS0001A23DB0_12908/1-57",
"URS0001A23DB0_1121115/1-57"
] | [
"GAAAGGCUGCCAUAUUUCGCCA-----------------------------------------------UCCGG-CAGCUGGGUG-----------------------------------CAUACCGAGA-----------------------------------------------------------------------------------------------------CACCCCAA----UUAGG",
"GAAAGGCGGCC---GUAA-------------------------------------------... | rfam_14_5_ref |
URS0001A24B1A_12908_1-81 | GGGAGUGCAUCUUAGAGCUUCCGCAGCCGUGAGGUGUUAAUAGUCUGUCUCAUUUGGCCGAGACACGACGGUUAGUGAAUC | ((((((..........))))))..............(((((.(((.((.((..........)).))))).)))))...... | [
"URS0001A24B1A_12908/1-81",
"URS0001A24298_12908/1-81",
"URS0001A231D7_12908/1-81",
"URS0001A23755_12908/1-74",
"URS0001A2375D_12908/1-75",
"URS0001A239FA_12908/1-75",
"URS0001A23B31_12908/1-76",
"URS0001A2324C_1392486/1-76",
"URS0001A24AA1_12908/1-76",
"URS0001A23FB6_12908/1-75"
] | [
"GGGAGUGC---AUCUUA----------GAGCUUCC--GCAGCCGUGAGGUGUUAAUAGUCU-GU--CUC---------AUUUGGCCGAGACA-CGACGGUUAGUG-AAUC",
"GGGAGU-----GUGUCUUAGA--------GCUUCC--GCAGCCGUGAGGUGUUAAUAGUCU-GU--CUC---------AUUUGGCCGAGACA-CGACGGUUAGUG-AAUC",
"GGGAGU-----GUGUCUUAGA--------GCUUCC--ACAGCCGUGAGGUGUUAAUAGUCU-GU--CUC---------AUUUG... | rfam_14_5_ref |
URS0001A24B1D_12908_1-83 | CGCCGUGAACUGAGGGGUCCUGUCUCCCCCUUCAGAUCCGGUUGCGGGCCAUUCUGCCCGCCGACAUCAUAAGUGAGAAGGAG | ..(((.((.((((((((..........)))))))).)))))..(((((........)))))...................... | [
"URS0001A24B1D_12908/1-83",
"URS0001A2328A_12908/1-77",
"URS0001A2354A_12908/1-76",
"URS0001A23AF8_338963/1-76",
"URS0001A23754_12908/1-75"
] | [
"CGCCGUGAACUGAGGGG-----UCCUGUCUCCCCCUUCAGAUCCGGUU------------------GCGGGC------CAUUCU------GCCCGC--------CGACAUCAUAAGUGAGAAGGAG",
"GUCCGUGAACUGAGGGG-----AAAUGUCUCCCCCUUCAGAUCCGGC-------------------GGCGGG------AUGU--------CCCGCC-----------CAUUACACGCAAGAAGGAG",
"GUCCGUGAACUGAGGGG-----AAAUGUCUCCCCCUUCAGAUCCGGC----... | rfam_14_5_ref |
URS0001A24B28_73044_1-48 | UCGGCUCCGGUUCACGCACCCGCAUUCCCGCGGUGGCGACCCGGCGCC | ..(((.((((....(((..(((........)))..)))..)))).))) | [
"URS0001A24B28_73044/1-48",
"URS0001A23F85_12908/1-47",
"URS0001A24008_12908/1-46",
"URS0001A23D1D_12908/1-45",
"URS0001A23B11_12908/1-39",
"URS0001A236FE_12908/1-47",
"URS0001A245DB_29306/1-48",
"URS0001A23D52_700597/1-47",
"URS0001A23B60_12908/1-47",
"URS0001A23B60_1463917/1-47"
] | [
"UCGG-CUCCGGUUCACGCACCCGC------------------------AUUCCC------------------------------------------------------------------GCGGUGGCGACCCGGC--GCC",
"GUGG-CUCCGGUUCACGGCC--AGC-----------------------ACCCC------------------------------------------------------------------GCUGAGGCCGACCCGGA--GCC",
"CUGG-CUCCGGUUCACGUC-C... | rfam_14_5_ref |
URS0001A24B35_1121370_1-86 | ACUCAGGCACGAUCUGCGCCUUAUAUAUACGCACCAAUCAAGCGUUAUCUGCGCGCCGAACCGACCUGAAGUUCAAUCCUGAGGGA | (((((((.....((.((((.........((((.........)))).......)))).)).....)))).))).............. | [
"URS0001A24B35_1121370/1-86",
"URS0001A24ABF_196627/1-56"
] | [
"ACUCAGGCACGAUCUGCGC-----CUUAUAUAUACGC-------------------------------ACCAAUCAA------------------------------------------GCGUUAUCUGC--------------------GCGCCGAACCGACCUGAAGU--UCAAUCCUGAGGGA",
"ACUCGGGCACGAUCUGGC--------------------------------------------------AUCC---------------------------------------------------... | rfam_14_5_ref |
AACY020454584.1_1474-1546 | ACUCGUCUGAGCGAGUAUAAAUAGGCUUUUGGCUCAGAGCGAUUCCUGGAGCGCUGUUUCCAGGGAUGUAGCA | ((((..[[[[[.))))........(((.....]]]]]....(((((((((........)))))))))..))). | [
"AACY020454584.1/1474-1546",
"ABLX01198122.1/57-104",
"ABLX01246400.1/55-101",
"ABLX01165607.1/35-1"
] | [
"ACUCGUCUGAGCGAGUAUAAAUAGGCUUUU--GGCUCAGAGCGAUUCCUGGAGCGCUGUUUCCAGGGAUGUAGCA",
"ACUCGUCAGAGCGAGUAUAAAUAGCUUUUUUAGGCUCUGAGCGUCCUC---------------------------",
"ACUCGUCAGAGCGAGUAUAAAUAGCUUUUUAGGCUCUGAAGCGUACC----------------------------",
"ACUCGUCAGAGCGAGUAUAAAUAGCUUUUUAGGCU-------------------------------------... | rfam_14_5_mafft |
AACY020496190.1_1503-1438 | AGUCGUCUAAGCGACUCUAAAAAGGCUUUAAGCUUAGAGCGUUCGCCCAUAUUGGGCGAGGUUGUA | ((((..[[[[[.))))........((......]]]]]....(((((((.....)))))))...)). | [
"AACY020496190.1/1503-1438",
"AACY022607213.1/736-672"
] | [
"AGUCGUCUAAGCGACUCUAAAAAGGCUUUAAGCUUAGAGCGUUCGCCCAUAUUGGGCGAGGUUGUA",
"ACUCGACUAAGCGAGAAUAAAAAGGCUUUAGGCUUAGAGCGUUCGCCC-UUCGGGGCGGGGUAGUA"
] | rfam_14_5_mafft |
AACY022661277.1_934-864 | ACUGGACUACGCCAGUAUAAAUAGGCAUUAAGCGUAGUGCGUUCCAAUGUUGUGAAACAUCGGAGGUUGUU | ((((..[[[[[.)))).......((((.....]]]]]....((((.((((......)))).))))..)))) | [
"AACY022661277.1/934-864",
"AACY020846719.1/108-178",
"AACY020846719.1/529-597"
] | [
"ACUGGACUACGCCAGUAUAAAUAGGCAUUAAGCGUAGUGCGUUCCAAUGUUGUGAAACAUCGGAGGUUGUU",
"ACUCGACUAAGCGAGUAUAAAUAGGCAUUAGGCUUAGAGCGUUCCAAUGUUGUGAAACAUCGGAGGUUGUU",
"ACUGGACUACGCCAGUAUAAAUAGGCAUUAAGCGUAGUGCGUUCCA--GUCUUCACAGACUGGAGGUUGUU"
] | rfam_14_5_mafft |
AACZ03123677.1_4633-4230 | GACAGGAGGAAACGCAGCGCCAGCAGCAUCUCAUCUACCCUCCUUGACACCUCCUCCCCGUGGCUCCAGCCAGACCCUAGAGGUCAGCCUUGCGGACCAACAGGAGGACUCCCAGCUUUCCCUUUUCAAGAGGUCCCCAGACACCGGCCACCCUCUUCCAGCCCCUGCGGCCAGUGCAAGGAGGCACCAAUGCUCUGAGGCUGUCGCGUGGUGCAGCGUCGAGCAUCCUCGCCGAGGUCCUUUCUGCUGCCUGUCCCGCCUCACCCCGCUCCAUCACACCAGCUGGCCCUCUUUGCUUCCUUUUCCCAGAAUCGUUAAGC... | ..((((((((...((((.((.(((((............((((((((.(((..........(((((.(((.........(((((...((((((.(((((...((((((.............)))))).....))))).))).....)))...)))))........))).)))))))))))))))).....((((((.((.((((.(((...))))))).))))))))((((...))))......)))))))))))..........((.(((..........))).))......................((.(((......... | [
"AACZ03123677.1/4633-4230",
"AL138805.8/76141-75741"
] | [
"GACAGGAGGAAACGCAGCGCCAGCAGCAUCUCAUCUACCCUCCUUGACACCUCCUCCCCGUGGCUCCAGCCAGACCCUAGAGGUCAGCCUUGCGGACCAACAGGAGGACUCCCAGCUUUCCCUUUUCAAGAGGUCCCCAGACACCGGCCACCCUCUUCCAGCCCCUGCGGCCAGUGCAAGGAGGCACCAAUGCUCUGAGGCUGUCGCGUGGUGCAGCGUCGAGCAUCCUCGCCGAGGUCCUUUCUGCUGCCUGUCCCGCCUCACCCCGCUCCAUCACACCAGCUGGCCCUCUUUGCUUCCUUUUCCCAGAAUCGU... | rfam_14_5_mafft |
AAJM01000018.1_9079-9029 | UGUGUUUCACUCCUUUUACAUGUAUUGUAAACCUUCACACUAAUGUGAAGG | .............((((.(((((...................))))))))) | [
"AAJM01000018.1/9079-9029",
"AE016877.1/5073644-5073594",
"CM000745.1/4393294-4393244"
] | [
"UGUGUUUCACUCCUUUUACAUGUAUUGUAAACCUUCACACUAAUGUGAAGG",
"UGCGUUUCACUCCUUCUACAUGUAUUGUAAACCUUCACACUAAUGUGAGGG",
"UGCAUUUCACUCCUUUCGUAUAUAUUGUAAACCUUCACACUAAUGUGAAGG"
] | rfam_14_5_mafft |
AAKY01000063.1_80713-80932 | CACUUCAUCUUUCAUCUUUGCACACCCGAAUUCCGCAGGGUUUUUCAAGUACCAGAGGUAGCCGGUUGCCGCGUGACGAAGGGAACAAAUCGACCAAAGAAGCGAGGACGGUCAUGCGAUCUGCCCGGAUUGCACUGAUGCUGACGAUCGUGCUUGCCGGUCCGUAUGCGUCGAACUUCGCGUAUGCGCAGCGCCCCGAGCAGGGCGCAUCGUCGCGCAA | ................((((....(((...((.(((..(((...((...((((...))))...))..)))..)))..)).)))..)))).((.(.....(.(((((..(.((.....((((.((...(....(..(......)..)....)....)).)))).....))...)..).)))).)..(((..(((((........)))))..))).)))... | [
"AAKY01000063.1/80713-80932",
"CP000380.1/737566-737785"
] | [
"CACUUCAUCUUUCAUCUUUGCACACCCGAAUUCCGCAGGGUUUUUCAAGUACCAGAGGUAGCCGGUUGCCGCGUGACGAAGGGAACAAAUCGACCAAAGAAGCGAGGACGGUCAUGCGAUCUGCCCGGAUUGCACUGAUGCUGACGAUCGUGCUUGCCGGUCCGUAUGCGUCGAACUUCGCGUAUGCGCAGCGCCCCGAGCAGGGCGCAUCGUCGCGCAA",
"CACUCCAUCUUUCAUCUUUGUACACCCGAAUUCCGCAGGGUUUUUCAAGUACCAGAGGUAACCGGUUGCCGCGUGACGAAGGGAACAAA... | rfam_14_5_mafft |
AALC02000098.1_4036-4190 | GAGAUCAAAGAAUCACCCUCGGUUGUUGGUUAAAUUAUUAUCUUGUCAAUCAGGAUUUUGGCGAAAUCUAAUGCUGUUAAACACCCGAUAAAUCAAUCAAUUCAAUAGUGAUAAUGGAGAGGAUGAUGAGUAAAAAGAAAGGGUUAACUACCGCA | .........((((.......(..(((((.(.(.......((..((((((........))))))..)).........).)......)))))..)......))))....((.((..(.......)..))..)).........((.....))...... | [
"AALC02000098.1/4036-4190",
"AM286415.1/1541353-1541200",
"FR729477.2/249912-249759",
"ACCA01000005.1/16418-16265"
] | [
"GAGAUCAAAGAAUCACCCUCGGUUGUUGGUUAAAUUAUUAUCUUGUCAAUCAGGAUUUUGGCGAAAUCUAAUGCUGUUAAACACCCGAUAAAUCAAUCAAUUCAAUAGUGAUAAUGGAGAGGAUGAUGAGUAAAAAGAAAGGGUUAACUACCGCA",
"GAGAUCAAAGAAUAAACCGCUGAUGUUGUUUAAGUUAUUAUUUUGCCAAUCGGACUUUUGGCGAAAUCUCAUACUGUAAAACACCCAAUACG-CAAUCAAUUCAACAGCCAUACUGGAGAAAAUGAUGAGCAAAAAGAAAGGAUUAACCACCGC... | rfam_14_5_mafft |
AAQB01006145.1_104686-104836 | AGCACCAAAAUCAGUAACCAAGCGAAUGCUAAACUAGCUUGGGGACUACGCUUGGGUGCUCAAAUUGAUUUAACCGCUCGCUAUAAUGCCAAACAUAACAUUAAGAGCAUAACCUAAUCCUCGCUAUGCUUGUGGCCCUGUUUCGAGACAC | ((((((......(((..((((((.............))))))..))).......)))))).........(.......(((..(((..((((.............((((((..(.........)..)))))).))))..)))..)))).... | [
"AAQB01006145.1/104686-104836",
"AAPU01010147.1/87506-87365",
"AANI01014934.1/201555-201413",
"AAPT01021484.1/866747-866600",
"AASS01007470.1/1742-1886",
"AAPP01018740.1/148667-148811",
"AAGH01006567.1/2471-2327",
"AAIZ01002208.1/899-755"
] | [
"AGCACC-AAAAUCAGUAACCAAGCGAAUGCUAAACUAGCUUGGGGACUACGCUUGGGUGCUCAAAUUGAUUUAACCGCUCGCUAUAAUGCCAAACAUAACAUUAAGAGCAU---AACCUAAUCCUCGCUAUGCUUGUGGCCCUGUUUCGAGACAC",
"AGCACC-AAAAUCAGUAACCAAGCGACUGCUAAACUAGCUUGGCGACUACGCUUGGGUGCUAAAAUU-AAAU------ACGCUAUGAUGCCGCAU-UUAUUAAAAGAGCAUACUAAC----CCAUUAGAAUGCUUGUGGCCUUGUUUUGUAACA... | rfam_14_5_mafft |
AAXW01000073.1_3077-3000 | UCUAAAAUCGUGUGAUUUCGGUAUCUCCCAUUGAUAUUGAGUUCUCCUAGAAUACCUCGGUGAUGCGCCGAGGUUUUU | .....................................................((((((((.....)))))))).... | [
"AAXW01000073.1/3077-3000",
"CP000806.1/3982179-3982256"
] | [
"UCUAAAAUCGUGUGAUUUCGGUAUCUCCCAUUGAUAUUGAGUUCUCCUAGAAUACCUCGGUGAUGCGCCGAGGUUUUU",
"UCUAAAAUCGUGUGAUUUCGGUAUCUCCCAUUGAUAUUGAGUUCUCCUAGAAUACCUCGGUGAUGUACCGAGGUUUUU"
] | rfam_14_5_mafft |
AAYW02000017.1_89779-89685 | ACAGUACAAACUGAGCAGGCGGUGGGAUGACCACAGGGCCGGGCCACACAGGGUGGCAGCAGAUAAAGAAUGAAUUUAUGAUCUGCGGGACAGUA | .........((((.....((.((((.....))))...))...(((((.....))))).(((((..................)))))....)))). | [
"AAYW02000017.1/89779-89685",
"BABG01026138.1/868-788",
"BAAZ01003956.1/1271-1191"
] | [
"ACAGUACAAACUGAGCAGGCGGUGGGAUGACCACAGGGCCGGGCCACACAGGGUGGCAGCAGAUAAAGAAUGAAUUUAUGAUCUGCGGGACAGUA",
"ACAGUACAAACUGAGCAGGCCGGGGAUU--UCCUGGGCACGGGUCGUA---AAUGACAGUGGAUCGAAGAC---------AUCUGCGGGACAGUA",
"ACAGUACAAACUGAGCAGGCCGGGGAUU--UCCUGGGGCCGGGUCGUA---AAUGACAGUGGAUCGAAGAC---------AUCUGCGGGACAGUA"
] | rfam_14_5_mafft |
AB546780.1_10221-10069 | AUCUUAAAUAGAAAGAGGGUUUGCAUAUGGACUUCACUGGUGUUAUUACAAGCAUUAUUGAUUUAAUCAAGACUUGCAUUCAGACUUUCGGUUAAGUUUUUUGUUUCAACGCAAUAAAAAAACAGAGGAAAUAUUCAACAAUUUGAUUGUUUC | ......(((.(((((...(..((((....((.((((.(((((((......))))))).)))...).))......))))..)...))))).)))..................................((((((.((((....)))).)))))) | [
"AB546780.1/10221-10069",
"BX571856.1/49332-49190",
"Y13052.1/1021-1172",
"Y14051.1/1066-1207"
] | [
"AUCUUAAAUAGAAAGAGGGUUUGCAUAUGGACUUCACUGGUGUUAUUACAAGCAUUAUUGAUUUAAUCAAGACUUGCAUUCAGACUUUCGGUUAAGUUUUUUGUUUCAACGCAAUAAAAAAACAGAGGAAAUAUUCAACAAUUUGAUUGUUUC",
"AUCUUAAAUAGAAAGAGGGUAUGCAUAUGGAUUUCACUGGUGUUAUUACAAGCAUUAUUGAUUUAAUCAAGACUUGCAUUCAGGCUUUCGGUUAAUUUUUU----------CAACUAAAAAACAGAGGAAAUAUUCAACGACUUGAUUGUUUC",
... | rfam_14_5_mafft |
AB917088.1_10623-10699 | CAGUGUCGGGCCACAGGUUUUGUGCCAUUAGCGUGCAGUGCAGCCCGGACAAAAGACACGCCCCAGGAGGACUGGGA | ......(((((((((.....))))...((.......))....)))))..............(((((.....))))). | [
"AB917088.1/10623-10699",
"JX236040.3/10648-10723",
"MF380429.1/10655-10730"
] | [
"CAGUGUCGGGCCACAGGUUUUGUGCCAUUAGCGUGCAGUGCAGCCCGGACAAAAGACACGCCCCAGGAGGACUGGGA",
"CAAAGUCAGGCCGUAGGUUUUACGCCACUAGCAUGCAGUGCUGCCUGAG-ACAAGACAUGCCCCAGGAGGACUGGGA",
"CAAAGUCCGGCCACAGGUUUUGUGUCACUAAUAUGCAGUGCUGCCUGAG-CAAAGACAUGCCCCAGGUGGACUGGGU"
] | rfam_14_5_mafft |
AB981186.1_10338-10399 | GCCCCCGCAAGGAGGAACGUGUCACUGGCAUGUUCCUGGGAGUUAACGGCUCUCCGGCCCCA | ....(((.....((((((.............))))))((((((.....)))))))))..... | [
"AB981186.1/10338-10399",
"KC464457.1/10342-10401"
] | [
"GCCCCCGCAAGGAGGAACGUGUCACUGGCAUGUUCCUGGGAGUUAACGGCUCUCCGGCCCCA",
"GCCCCCGCAAGGAGGGACGUGU--GCAUCACGUUUCUGGGAGUUAACGGCUCUCCGGCCCCA"
] | rfam_14_5_mafft |
AB981186.1_10486-10549 | GCCCGCGCAAGGAAAGACGUGGAGCAGUCCGCGAUCUUUGGGAGUUGACGACUCUCCGCCCCCA | ....(((.....(((((.................)))))((((((.....)))))))))..... | [
"AB981186.1/10486-10549",
"MH827524.1/10367-10426"
] | [
"GCCCGCGCAAGGAAAGACGUGGAGCAGUCCGCGAUCUUUGGGAGUUGACGACUCUCCGCCCCCA",
"GCCCCCGCAAGGAGGGACGU---GCUUUUCACG-UCUCUGGGAGUUGACGACUCUCCGGCCCCA"
] | rfam_14_5_mafft |
ABBG01000012.1_1114-1321 | AAAUGCGCUACGGGGAACGAUAAAAACAGCGCGGGGGUAGCGUUGCUGGCACGCGUUCAGCGUGUCGGCAGCGGUUGUCUGCAUGCACGACGGGGCCAACCACCACAACAAACCAACAUGCAGGCACAUACGCCUAUUCAAUCGACGUUCCGCCGUCCGGCCGGGGGAAGCAGAGGUCAAUGCGGGCGGCGGCGGACGCAUUUUUUAC | (((((((((.((.(...............).)).))....((((((((((((((.....))))))))))))))..((((((((((.......((........))............))))))))))...(((.(.((...)).).)))(((((((.(((.(((.(...............).))).)))))))))))))))))..... | [
"ABBG01000012.1/1114-1321",
"CP000086.1/259652-259853",
"CP000548.1/3330916-3330716",
"CP000570.1/239381-239581"
] | [
"AAAUGCGCUACGGGGAACGAUAAAAACAGCGCGGGGGUAGCGUUGCUGGCACGCGUUCAGCGUGUCGGCAGCGGUUGUCUGCAUGCACGACGGGGCCAACCACCACAACAAACCAACAUGCAGGCACAUACGCCUAUUCAAUCGACGUUCCGCCGUCCGGCCGGGGGAAGCAGAGGUCAAUGCGGGCGGCGGCGGACGCAUUUUUUAC",
"AAAUGCGCUACGGGGAACAAUAAAAACAGCGCGGGGGUAGCGUUGCCGGCACGCUUUCGGCGUGCCGGCAGCGGUUGUCUGCAUGCACGACGGGGCCAAUC... | rfam_14_5_mafft |
ABLN01000435.1_3857-4030 | GUCGACUGGUCAGAGGCUUUCUGUACAAGGUCAGACAGUAUCCCACCCGGCCCACUAGUGAAACUGGUUCAAUCCCAGUAUCGCGCACCACGAUUGACCUGCGGUUUCAUCCACAAAAUCUGGGCUGCGUGAACUAAAUGUGAACUGACUCGGUGCAACCACCGAAAGGUUCCU | ((((.(((..((((.....))))..)).).)..))).......(((.(((((((...(((((((((..((((((...((.......))...))))))....)))))))))..........))))))).)))..........(((((...((((((....))))))..))))).. | [
"ABLN01000435.1/3857-4030",
"BX842580.1/207875-208046"
] | [
"GUCGACUGGUCAGAGGCUUUCUGUACAAGGUCAGACAGUAUCCCACCCGGCCCACUAGUGAAACUGGUUCAAUCCCAGUAUCGCGCACCACGAUUGACCUGCGGUUUCAUCCACAAAAUCUGGGCUGCGUGAACUAAAUGUGAACUGACUCGGUGCAACCACCGAAAGGUUCCU",
"GUCGCCUGGUCAGAGGCUUUCUGUAC-AGGUCAGACAGUAUCCCA-CCGGCCCACUAGUGAAACUGGUUCAAUCCCAGUAUCGCGCACCACGAUUGACCUGCGGUUUCAUCCACAAAAUCUGGGCUGCGUGAACU... | rfam_14_5_mafft |
ABNK01016853.1_25-90 | AGUCGUCUGAGCGACUAUAAACAGAGUUUUAGGCUCAGAGCGCCUCCCCUUCGGGGGAGGGUACUA | ((((..[[[[[.))))........(((......]]]]]....(((((((....)))))))..))). | [
"ABNK01016853.1/25-90",
"AACY020454584.1/937-1000"
] | [
"AGUCGUCUGAGCGACUAUAAACAGAGUUUUAGGCUCAGAGCGCCUCCCCUUCGGGGGAGGGUACUA",
"ACUCGUCUGAGCGAGUAUAAAC--CACUUUAGGCUCAGAGCGUCCCCACUUCGGUGGGGGGUAGCA"
] | rfam_14_5_mafft |
ABPA01000012.1_259180-259079 | ACACUCGACCAGAUUUUUUUGAUUUUCGAUUUCCAAACGCGAUUUAUUCCAAUCCGCCUUGUAGCAGACUAACCGGUGCACUUUUGCACGUGUACGCAAGAC | ....((((..(((((.....))))))))).........(((...........((.((......)).)).......(((((....))))).....)))..... | [
"ABPA01000012.1/259180-259079",
"AFYV01000981.1/13872-13771",
"AFHV01000122.1/7874-7975",
"AFPV01000520.1/7122-7021"
] | [
"ACACUCGACCAGAUUUUUUUGAUUUUCGAUUUCCAAACGCGAUUUAUUCCAAUCCGCCUUGUAGCAGACUAACCGGUGCACUUUUGCACGUGUACGCAAGAC",
"ACGCUCGACCAGAUUUUUUUGAUUUUCGAUUUCCAAACGCGAUUUAUUCCAAUCCGCCUUGUAGCAAACUAACCGGUGCACUUUUGCACGUGUACGCAAGAC",
"ACGCUCGACCAGAGUUUUUUGAUUUUCGAUUUCCAAACGCGAUUCAUUCCAAUCCGCCUUGUAGCAAACUAACCGGUGCACUUUUGCACGUGUACGCAA... | rfam_14_5_mafft |
ABPY01006745.1_722-791 | GCUGGUCACGGCCAGUAUAAACAGACAUUAAGCCGUGAGCGUCUCCUGUUCUGUGAACGGGAGGGUUGUA | ((((..[[[[[.))))........(((.....]]]]]....(((((((((.....)))))))))..))). | [
"ABPY01006745.1/722-791",
"ABPY01006746.1/503-437"
] | [
"GCUGGUCACGGCCAGUAUAAACAGACAUUAAGCCGUGAGCGUCUCCUGUUCUGUGAACGGGAGGGUUGUA",
"AGAGGUCACAGCCUCUUAAAAUAGACAUUAAGCUGUGAGCGUCUCCCG---UAUUAACGGGAGGGUUGUA"
] | rfam_14_5_mafft |
ABSH01000027.1_84172-83906 | CAUCGCGAUGCUCUUCAGAGAUGGAGAAAUCGUGAUGAGGAUACUUUCAAAGCCCCAACUGAAGGAGUUGGUUUUGUACUCGCCGCAACAUGUCGCACGUCUGGAAAAGGCAGGCCUAUUCCCCAAGCGGGUACAGCUGGGCCCGAACAGAGUGGGAUGGGUCGAAGAUGAAGUGCUGGACUGGCUACAAACACGGAUGGAGGGUCGCGAGGAGGCCUGACCGACACUCCUCAUGUAGGAGUAUGGGUGGCCGGAGGUGCACACUUC | (((((((((..((((((....)))))).))))))))).................(((.((...(.(((((((((..(((((((..(.((.((((.(((..(((.....(((.(((.....(((.....)))....)))..)))....))).))).)))).)).)..).)).))))..))))))))).)......)).)))..((((((............(((...(((((.....)))))..))))))))).(((.......))). | [
"ABSH01000027.1/84172-83906",
"CP000031.1/1307274-1307010"
] | [
"CAUCGCGAUGCUCUUCAGAGAUGGAGAAAUCGUGAUGAGGAUACUUUCAAAGCCCCAACUGAAGGAGUUGGUUUUGUACUCGCCGCAACAUGUCGCACGUCUGGAAAAGGCAGGCCUAUUCCCCAAGCGGGUACAGCUGGGCCCGAACAGAGUGGGAUGGGUCGAAGAUGAAGUGCUGGACUGGCUACAAACACGGAUGGAGGGUCGCGAGGAGGCCUGACCGACACUCCUCAUGUAGGAGUAUGGGUGGCCGGAGGUGCACACUUC",
"CAUCGCGAUGCUCUUCAAUCAUGGAGACAUCGUGAUGAGGAU... | rfam_14_5_mafft |
ABVR01000037.1_34959-34871 | GCUGCUCGAAUGAAUCACACACCUCUUUGUGGUGAGUAGCAGGCAACGAUCUAAGAAUCAGGGAUCCGGUGAUCGGCUGAGAUGUGAAG | (((((((.............(((.......))))))))))......(((((...................))))).............. | [
"ABVR01000037.1/34959-34871",
"BAAX01009272.1/687-759",
"BABG01003130.1/789-717",
"ADJS01009498.1/9048-9120",
"ADJS01000960.1/2397-2471",
"FP929042.1/1182829-1182917",
"ADJS01012391.1/1357-1285"
] | [
"GCUGCUCGAAUGAAUCACACACCUCUUUGUGGUGAGUAGCAGGCAACGAUCUAAGAAUCAGGGAUCCGGUGAUCGGCUGAGAUGUGAAG",
"GCUGCUCUGAU-AAUCACACACCUCUCCGUGGUGGGCAGCAGGUAACGAUCUUA---------------UGAUCGGCUGAGAUGUGAAG",
"GCUGCUCUGAU-AAUCACACACCUCUUCGUGGUGAGCAGCAGGGAACGAUCUUA---------------CAGUCGGCGAAGAUGUGAGA",
"GCUGCUCGGAC-AAUCACACACCUCUUCAU... | rfam_14_5_mafft |
ABYA01000314.1_2329-2086 | AGUUCCGGUGCGGUCGGCGCCUUUCCCAAGAAACGCGAGAGGGAAAUGACCCCCCACCGAACCCACCCUUUCCCGCCCGGGACCUGCGCUCACUCGGGCGGGUGGACAUCACCGCUCGGCCGGCUUUUCGGGUGCCCCGCGGCUUUACGCUCAGCGCACACCACCGCAGAAAAGACUUCGGCCCCCGCCGGGACUGGCAUCCCAGUGCGAGGGCCUGACCACCAAGGAAGACGAGACCUUCCCG | ......((((.....((((......................................................))))............((((((....))))))...............(.(............................).).........................(((((.(((.((((......))))...))).)))))....))))..(((((.......))))).. | [
"ABYA01000314.1/2329-2086",
"ACFA01000511.1/6065-5823"
] | [
"AGUUCCGGUGCGGUCGGCGCCUUUCCCAAGAAACGCGAGAGGGAAAUGACCCCCCACCGAACCCACCCUUUCCCGCCCGGGACCUGCGCUCACUCGGGCGGGUGGACAUCACC-GCUCGGCCGGCUUUUCGGGUGCCCCGCGGCUUUACGCUCAGCGCACACCACCGCAGAAAAGACUUCGGCCCCCGCCGGGACUGGCAUCCCAGUGCGAGGGCCUGACCACCAAGGAAGACGAGACCUUCCCG",
"AGCUCCGGUGCCGUCGGCGCCUUCCCAAAGCAAGAACCCGGGGAGAAAACACCCCACCAAGCCC... | rfam_14_5_mafft |
AC018761.6_48391-48315 | GGCCUCAAGUGAUGGAGAGCAAUACCCGGGGAUGACUGUGACCACAUUGGGAUGUAUUCGUACUGUCUGAUGGGGCC | (((((((...(((((...(((((((((.((..((........))..)).))..))))).)).)))))...))))))) | [
"AC018761.6/48391-48315",
"CAEC01248628.1/1603-1530",
"AAPE02050986.1/14566-14492",
"AAHY01072741.1/86035-86109",
"DAAA02019387.1/33502-33577",
"ACBE01053081.1/13693-13618"
] | [
"GGCCUCAAGUGAUGGAGAGCAAUACCCGGGGAUGACUGUGACCACAUUGGGAUGUAUUCGUACUGUCUGAUGGGGCC",
"GGCCUCAAGUGAUGGAGAGCAAUACCCAGGGAUGACUGUG---ACAUUGGGAUGUAUUCGUACUGUCUGAUGGGGCC",
"GGCCUCAAGUGAUGGA--ACAAUGACCAGGGAGGACUGUGACCGAACUAGGAUGUGUUCGUACUGUCUGAUGGGGCC",
"GGCCUCAAGUGAUGGA--GACAUACCCUGGGAGGCCCAUGACCGGACUGGGAUGUAUUCGUACUGU... | rfam_14_5_mafft |
AC069351.5_37957-38002 | AGCUGAAGAGCUGAUGAUGUUCCCCUAAAGCUGAAGCUCUUAAGCU | ((((.(((((((......................))))))).)))) | [
"AC069351.5/37957-38002",
"ABGA01077128.1/22957-22999",
"AANU01123273.1/4120-4162"
] | [
"AGCUGAAGAGCUGAUGAUGUUCCCCUAAAGCUGAAGCUCUUAAGCU",
"AGCUGAAGAGC---UGAUGUUCCCCUAAGGCUGAAGCUCUUAAGCU",
"AGUUGAAGAGC---UGAUGUUCCUCUAAGGCUGAAGCUCUUAAACU"
] | rfam_14_5_mafft |
ACCA01000039.1_31556-31467 | CGCCAUAUCAGUGAUAUGGUUGUUGUGUUAGAUAUUGUUAUAAUGAUCCGGAUGAUUUUUAUGAAAAAGACAUUAUUGGCCAGUUCUUUG | .(((((.........)))))..........((((.((((((((.((((.....)))).))))))......)).))))............. | [
"ACCA01000039.1/31556-31467",
"AM286415.1/2007663-2007751"
] | [
"CGCCAUAUCAGUGAUAUGGUUGUUGUGUUAGAUAUUGUUAUAAUGAUCCGGAUGAUUUUUAUGAAAAAGACAUUAUUGGCCAGUUCUUUG",
"AGCCAUGUCAGUGAUAUGGUUAUUGUAUUAG-UAUUGUUAUAACAAUCUGGAUUAUUUUUAUGAAAAAGACAUUACUAGCUAGUUCUCUA"
] | rfam_14_5_mafft |
ACCL02000009.1_43428-43513 | ACAGUACAAACUGAGCAGACCGUAACAGUCCGUUAUGGAGUCGGGUCACAUGCGUGACAGUGGAAAUGUUCAUCCACGGGACAGUU | .........((((.....((.(((((.....)))))...))...(((((....))))).(((((........)))))....)))). | [
"ACCL02000009.1/43428-43513",
"BAAX01024222.1/601-517"
] | [
"ACAGUACAAACUGAGCAGACCGUAACAGUCCGUUAUGGAGUCGGGUCACAUGCGUGACAGUGGAAAU---GUUCAUCCACGGGACAGUU",
"ACAGUACAAACUGAGCAGACCGUGA----AUAUCAUGGGGUCGGGUCGCAGAAGCGACAGUGGAAGUUAGUUUCAUCCACGGGACAGUA"
] | rfam_14_5_mafft |
ACEY01000129.1_49787-50034 | GGUUCCGGUGCCGUCGGUGCCCUACCAAGACAAGAAACCGGGGGAAAUGACCCCUACCAAGCCCCACCCCUCCCGCCCGAGGCGCUUCGUCACUCGGGCGGGUGAACAUCACCGUUUGAGCUGGAUUUCGGGGCCCUCAACUCCCCUACUCUCAGCGCAAACAAACACAUCUGAAAAGGCAUCGGCCCCCGCUGGGACUGGCAUCCCGGUGCGAGGGCCUAACCACCAAGGAAGAAGAGAGCUUCCCG | ......((((.....((((......................................................))))............((((((....))))))..............(((((...........................)))))...........................(((((.(((.((((......))))...))).)))))....))))..(((((.......))))).. | [
"ACEY01000129.1/49787-50034",
"AL939121.1/30426-30180"
] | [
"GGUUCCGGUGCCGUCGGUGCCCUACCAAGACAAGAAACCGGGGGAAAUGACCCCUACCAAGCCCCACCCCUCCCGCCCGAGGCGCUUCGUCACUCGGGCGGGUGAACAUCACCGUUUGAGCUGGAUUUCGGGGCCCUCAACUCCCCUACUCUCAGCGCAAACAAACACAUCUGAAAAGGCAUCGGCCCCCGCUGGGACUGGCAUCCCGGUGCGAGGGCCUAACCACCAAGGAAGAAGAGAGCUUCCCG",
"GGUUCCGGUGCCGUCGGCGCCCUACCAAGACAAGAAA-CGGGGGAAAUGACCCCUACCAAG... | rfam_14_5_mafft |
ACIE02000035.1_129003-128921 | ACAGUACAGACUGAUCAGGUCAUAAGACCGGGCUGUUAAAAAAACAGCAGCAGAUGAAAUUAACAGCAUCUGUGGGACAAGUG | .........((((.....(((....)))...(((((.......))))).(((((..............)))))....)).)). | [
"ACIE02000035.1/129003-128921",
"ACDH01000075.1/27393-27312"
] | [
"ACAGUACAGACUGAUCAGGUCAUAAGACCGGGCUGUUAAAAAAACAGCAGCAGAUGAAAUUAACAGCAUCUGUGGGACAAGUG",
"ACAGUACAGACUGAUCAGGUCAUAUGACUGGGCUGUU-AAAAAACGGCAGCAGAUGAAAUCAACAGCAUCUGUGGGACAAGUG"
] | rfam_14_5_mafft |
ACII01000103.1_12160-12054 | ACAGUACAAACUGAGCAGGCGAUGCCCGAGAUGCUUGAGGGCGUGGGGCCGGGCCGCGCGAAGCGGCAGCAGAUAUGAAAAUUUUCAGACAUAUCUGUGGGACAGUG | .........((((.....((.(((((.............)))))...))...(((((.....))))).(((((....................)))))....)))). | [
"ACII01000103.1/12160-12054",
"ACTJ01000082.1/4659-4566",
"BABE01016748.1/605-499",
"BABE01000339.1/4553-4659",
"ADJS01017039.1/13737-13800",
"AGTN01307508.1/5-99",
"ACTR01000042.1/628-533",
"ABFY02000067.1/269385-269480",
"CP000939.1/1702810-1702899",
"AGTN01407302.1/1961-2052"
] | [
"ACAGUACAAACUGAGCAGGCGAUGCCCGAGAUGCUUGAGGGCGUGGGGCCGGGCCGCGCGAAGCGGCAGCAGAUAUGAAAAUUUUCAGACAUAUCUGUGGGACAGUG",
"ACAGUACAAACUGAGCAGGCAAUGACCAGAGCGG------UCAUGCAGCCGGGCUGCGAAA-GCGGCAACAGAUGAUUACAC------GCACAUCUGUGGGACAGUU",
"ACAGUACAAACUGAGCAGGCGAUGCCCGAGAUGCUCGAGGGCGUGGGGCCGGGCCGCGCGAAGUGGCAGCAGAUAUGAACAUUUUCAGA... | rfam_14_5_mafft |
ACIO01000756.1_6332-6236 | ACAGUACAAACUGAGCAGGCAAUGUCUGAUCAUGCGACAUGAAGCCGGGCCGCUUCGGCGGCAGCAGAUGGGUAUCAGGCGCAUCUGUGGGACAGUA | .........((((.....((.(((((.........)))))...))...(((((....))))).(((((...............)))))....)))). | [
"ACIO01000756.1/6332-6236",
"ABCC02000047.1/101761-101671"
] | [
"ACAGUACAAACUGAGCAGGCAAUGUCUGAUCAUGCGACAUGAAGCCGGGCCGC-UUCGGCGGCAGCAGAUGGGUAUCAGGCGCAUCUGUGGGACAGUA",
"ACAGUACAAACUGAGCAGGCCAAAGGCGUUUACUGCCUUGGGAGCCGGGCCGCGGGCGGCGGCAGCAGA-------CAGAAGCGUCUGUGGGACAGUG"
] | rfam_14_5_mafft |
ACUL01000219.1_9374-9283 | ACGGGUUUACCCCCGAAUCGAGCCUUGUGGUCUGUCCAGGCAUCAUUUAUAUGAGCCGCUCGAAUAACACUAAACUAAAAUCCAGGGUAAAC | ....((((((((.....((((((....(((.....)))(((.((........))))))))))).....................)))))))) | [
"ACUL01000219.1/9374-9283",
"ACUL01000193.1/56449-56540"
] | [
"ACGGGUUUACCCCCGAAUCGAGCCUUGUGGUCUGU-CCAGGCAUCAUUUAUAUGAGCCGCUCGAAUAACACUAAACUAAAAUCCAGGGUAAAC",
"ACGGGUUUACCCCCGCAUCGAGCCUAGUGGUCCUUACCAAGCAUCAUUUAUAUGAGCUGCUCGAAUAACACUAAAC-ACAAUCCUGGGUAAAC"
] | rfam_14_5_mafft |
ACUP01006700.1_43239-43155 | GAAUUCUCUAAAAGAGAUCUUUUUCUGCUCUUUGAAGAAAGAAGGGUCUUUGCUUGAUUUUGGAGAUGUCUCUGCUCUCAGAUCU | ....((((((((((((((((((((((.........))))..))))))))).......)))))))))....((((....))))... | [
"ACUP01006700.1/43239-43155",
"S46513.1/13-97"
] | [
"GAAUUCUCUAAAAGAGAUCUUUUUCUGCUCUUUGAAGAAAGAAGGGUCUUUGCUUGAUUUUGGAGAUGUCUCUGCUCUCAGAUCU",
"GAAUUCUCUAAAAGAGAUCCUUUUCUGCUCUUUGAAGAAAGAAGGGUCUUUGCUUGAUUUUGGAGAUGUCUCUGCUCUCAGAUCU"
] | rfam_14_5_mafft |
ACYV01000002.1_98152-98229 | UCGAUUUUAAGAUAACUUUACGUGGAUGGCUUUCUGCGUUUAUUUAUUAUUUAUAUAUCUUCAAAGUAGAACGCAAUG | ((.(((((((((((.....(((((((......)))))))................)))))).))))).))........ | [
"ACYV01000002.1/98152-98229",
"L01623.1/1218-1288",
"AAKI02000075.1/2726-2796"
] | [
"UCGAUUUUAAGAUAACUUUACGUGGAUGGCUUUCUGCGUUUAUUUAUUAUUUAUAUAUCUUCAAAGUAGAACGCAAUG",
"UCGAUUUUAAGAUAACUUUACGUGGAUGGCUCUCUGCGU-------UUAUUUAUAUAUCUUCAGAGUAGAACGCAAUG",
"UCAAUUUUAAUACAACUUUACGUGGAUGGCUCUCUGCGU-------UUAUUUAUAUAUCUUCAGAGUAGAACGCAAUG"
] | rfam_14_5_mafft |
ACZG01000001.1_1182032-1182127 | UUUGAUUUGCCCCACCAUUUCGAGCCUUGCAGCACAAGCUGGAUAUCCUUUUUGAGUGAAUCGCUCGACUAACACUAAACCAAAGAUAGGGCAAAU | ....((((((((.......((((((....((((....))))(((.((..........)))))))))))....................)))))))) | [
"ACZG01000001.1/1182032-1182127",
"CP001828.1/3011501-3011596",
"CR628337.1/2846659-2846754",
"FN650140.1/733830-733735",
"ACUL01000097.1/2498-2592"
] | [
"UUUGAUUUGCCCCACCAUUUCGAGCCUUGCAGCACAAGCUGGAUAUCCUUUUUGAGUGAAUCGCUCGACUAACACUAAACCAAAGAUAGGGCAAAU",
"CUUGAUUUGCCACACUAUUUCGAGCCUUGCAGCGCAAGCUGGAUAUCCUCUUUGAGUGAAUCGCUCGAUUAACACUAAACCAAAGACAGGGCAAAU",
"CUUGAUUUGCCCCAACAUUUCGAGCCUUGCAGCACAAGCUGGAUAUCCUCUUUGAGUGAAUCGCUCGAUUAACACUAAACCAAAGACAGGGCAAAU",
"CUUGAUUUG... | rfam_14_5_mafft |
ADAV01000062.1_11136-10957 | GAGGACAGAAGUUUCUCGCAAUUAAAAUUUAUCAGUUUUACUUUCUGCUCUCUGGAAACGCCUGCUUCUUUUUUCCCCGAGAGCAUUUUUUCGCAUUCCGAUUUGGUUAACUUUGUUUUUUGAGUACCUUGUCCAGUUAGUAGGAGUGCCACCUUCCUUUUCAAUAGUGGCGGUAAUUUU | .(((((.(((((((..........)))))..)).)))))..((((((((..(((((......((((.(((........)))))))....((((....(.((..........)).).....)))).......)))))..))))))))((((((..............))))))........ | [
"ADAV01000062.1/11136-10957",
"CP001396.1/1303639-1303817",
"AFDV01000042.1/40867-40689",
"ACXF01000026.1/92775-92953",
"CP000266.1/1884764-1884586",
"AEZV01000092.1/20993-20815",
"AERQ01000013.1/21897-21719",
"AGTL01000342.1/5660-5482",
"AFEA01000010.1/48077-47899",
"AEJY01000029.1/421-243"
] | [
"GAGGACAGAAGUUUCUCGCAAUUAAAAUUUAUCAGUUUUACUUUCUGCUCUCUGGAAACGCCUGCUUCUUUUUUCCCCGAGAGCAUUUUUUCGCAUUCCGAUUUGGUUAACUUUGUUUUUUGAGUACCUUGUCCAGUUAGUAGGAGUGCCACCUUCCUUUUCAAUAGUGGCGGUAAUUUU",
"GAGGACUGAAGUUUCUCGCAAUUAAAAUUUAUCAGUUUUACUUUCUGCUCUCUGGAAACGCCUGCUUCUUUUUUACCUGAGAGCAUUUUUUCGCAUUCUGAUUUCGUUAGUUUAG-AUUUUGAAUAUCU... | rfam_14_5_mafft |
ADCZ01000007.1_276193-276256 | AUUCGACUAGACGAGUAUAAAUAGGUGUCAGGUCUAGUGCGGCAGGGUUCUUCCCUGCAUCAUA | ((((..[[[[[.))))........(((.....]]]]]....((((((.....))))))..))). | [
"ADCZ01000007.1/276193-276256",
"ADCZ01000057.1/1592-1655",
"BABE01011365.1/336-273"
] | [
"AUUCGACUAGACGAGUAUAAAUAGGUGUCAGGUCUAGUGCGGCAGGGUUCUUCCCUGCAUCAUA",
"GAUCGACUAGACGAUUAAAAACAGGUGUUAGGUCUAGUGCGGCAGGGUUCUUCCCUGCGUCACA",
"AAUCGACUAGACGAUAAAAAACAGGUGUUAGGUCUAGUGCGGCAGGGUUCUUCCCUGCGUCACA"
] | rfam_14_5_mafft |
ADCZ01000007.1_277655-277723 | AAUCGACUAGGCGAUUUUAAAUAGGUGUUAAGCCUAGUGCGGUAAGAGGUAUAACCCUCUUGCGUCACG | ((((..[[[[[.))))........(((.....]]]]]....((((((((......))))))))..))). | [
"ADCZ01000007.1/277655-277723",
"ADCZ01000007.1/276491-276554"
] | [
"AAUCGACUAGGCGAUUUUAAAUAGGUGUUAAGCCUAGUGCGGUAAGAGGUAUAACCCUCUUGCGUCACG",
"AAUCGACUAGGCGAUUUAAAAUAGGUGUUAAGCCUAGUGCGGCAGGG-----UUCUUCCCUGCAUCACA"
] | rfam_14_5_mafft |
ADDF011338994.1_3988-3917 | UGGGCAUGUGAUGUGACCUUCCUGAGCCUGCAUUCCCUCACCUGGAAAUGAUGAGCAGUUACUGAUGCCACA | ..(((((.....(((((.....((..(.(.((((.((......)).))))).)..)))))))..)))))... | [
"ADDF011338994.1/3988-3917",
"AC193191.3/151617-151546",
"ADFV01060123.1/2136-2065",
"CAEC01259586.1/1980-2050",
"ACFV01107233.1/4420-4488"
] | [
"UGGGCAUGUGAUGUGACCUUCCUGAGCCUGCAUUCCCUCACCUGGAAAUGAUGAGCAGUUACUGAUGCCACA",
"UGGGCAUGUGAUGUGACCUUCCUGAGCCUGCAUUCCCUCACCUGGAAGUGAUGAGCAGUUACUGAUGCCACA",
"UGGGCAUGUGAUGUAACCUUCCUGAGCCUGCAUUCCCUCACCUGGAAAUGAUGAGCAGUUACUGAUGUCACA",
"UGGGUGUGUGGUGUGACCUUCCUGAGCCUGCAUUCCCUCACCUGGAAU-GAUGAGCAGUUACUGAUGUCACA",
"UGG... | rfam_14_5_mafft |
ADGC01006520.1_5852-5937 | UAACUUUGAACUGAGCAGGCAAUGCAGCGCAUGAGGCCGGGCCCGAGAGGCAGCAGAUUGAAACAACAAACAUCUGCGGGACAGUA | .........((((.....((.((((...))))...))...(((.....))).(((((...............)))))....)))). | [
"ADGC01006520.1/5852-5937",
"BAAY01006628.1/1007-962"
] | [
"UAACUUUGAACUGAGCAGGCAAUGCAGCGCAUGAGGCCGGGCCCGAGAGGCAGCAGAUUGAAACAACAAACAUCUGCGGGACAGUA",
"---------------------------------------GGCCCAUCGGGCAGCAGAUUCGUA-AACAAACAUCUGCGGGACAGUA"
] | rfam_14_5_mafft |
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