id stringlengths 12 30 | sequence stringlengths 12 4.38k | secondary_structure stringlengths 12 4.38k | aligned_ids listlengths 1 10 | aligned_sequences listlengths 1 10 | split stringclasses 4
values |
|---|---|---|---|---|---|
URS0001A2441E_1089548_1-34 | CUCUGAUUCCCAAGUUGAAUCAGGGCGGAAAGAG | ((((((((.........))))))))......... | [
"URS0001A2441E_1089548/1-34",
"URS0001A2441E_1288971/1-34",
"URS0001A24765_12908/1-32",
"URS0001A24A0F_157733/1-32"
] | [
"CUCUG-------AUUC---------CCAAGUU---------------GAAU-------CAGGG-C--GGAAAGAG",
"CUCUG-------AUUC---------CCAAGUU---------------GAAU-------CAGGG-C--GGAAAGAG",
"CUCUGUU-----UCG----------UAA--------------------UGA-----AUCAGGG-C--GGAAGGAG",
"CUCUGUU-----UCC----------UCA--------------------GGA-----AUCAGGG-C--GGAAG... | rfam_14_5_ref |
URS0001A24420_1577905_1-76 | GGGCACCUUCGGGGGCCUUUAACCAUAGGCGGGGGUGAUCGCACCCAUCGUCGUUUAGCAAAACGGAAGACAGUAA | ((((.(((...))))))).........(((((...............)))))........................ | [
"URS0001A24420_1577905/1-76",
"URS0001A23318_12908/1-66",
"URS0001A23F56_12908/1-66",
"URS0001A23B05_391595/1-68",
"URS0001A24622_12908/1-67",
"URS0001A23FA4_12908/1-69",
"URS0001A23EBA_12908/1-72",
"URS0001A23CDF_12908/1-65",
"URS0001A233A7_391613/1-64",
"URS0001A236C0_314264/1-64"
] | [
"GGGC-ACCU--UCG--------------------------------GGG----GCC-UUUAACCAUA-----GGCGG---------------------------------------GGGUGAUCGCACCCA-----------------------------------------------------------------------------------------U-CGUCG--UU-U-AGCAAAACGGA-AGACAGU-AA",
"GGCC-ACCU--ACG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A24428_12908_1-98 | GGUCACCUGUUCAGCCAAUGGCGCUCAGGGGGCUUUACACCAAGGCGGUGAUCUCGGGCGAACUCGGGGCAUCGCUUAUGCUAAACGGAAGACAGAAA | ((((.(((...................))))))).........(((((((...................)))))))...................... | [
"URS0001A24428_12908/1-98",
"URS0001A2323B_12908/1-91",
"URS0001A24034_12908/1-91",
"URS0001A23913_12908/1-91",
"URS0001A248AF_12908/1-38",
"URS0001A24A69_12908/1-38"
] | [
"GGUC-ACCU--GUUCAGCCAAUGGCGCUCA----------------GGG----GGC-UUUACACCAA-----GGCGG-----------UGAUCUCGGG------------------CGAA-------------------------------------------------------------------CUCGGGG-CA-----------------------U-CGCU------UAUGCUAAACGGA-AGACAGA-AA",
"GGUC-ACCU--GCUCACAUGCA------------------------GGG----... | rfam_14_5_ref |
URS0001A2442F_12908_1-65 | CUGUAAAGACAUGGUGAGUCGUAGGACCAUCUCCAUAAUUGCAGAAUGGGACAUGUCUCGAUGAA | .......(((((((((.(((....)))))).(((((.........))))).))))))........ | [
"URS0001A2442F_12908/1-65",
"URS0001A236AC_12908/1-63",
"URS0001A23558_12908/1-63",
"URS0001A23A2C_1441735/1-63",
"URS0001A23A2C_1441732/1-63",
"URS0001A23A2C_1226633/1-63",
"URS0001A23A2C_1441734/1-63",
"URS0001A23A2C_556263/1-63",
"URS0001A232B0_12908/1-63",
"URS0001A232B7_12908/1-63"
] | [
"CUGUAAAGACAUG-GU-GAGUCGUAG-GAC-CAUC--UCCAU-----------------AAUUGCAGA------------AUGGGACAU-GUCUCGAUG--AA",
"CUGUAAAGACAUG-GU-GAGUCGUAG-GAC-CAUC--UCCAU-----------------AAUUGCAGA------------AUGGGACAU-GUC--GAUG--AA",
"CUGUAAAGAUAUG-GU-GAGUCGUAG-GAC-CAUC--CCCAU-----------------AAUCGCAGA------------AUGGGACAU-AUC--GA... | rfam_14_5_ref |
URS0001A24434_12908_1-69 | AGGGAACCAGCACGGCCGCAAAUCUGACUCGCUCGGCGUCGACGUCGGGCUUCGAGAUUGCGGAAGUGC | .........((((..((((((..((.....(((((((......)))))))....)).))))))..)))) | [
"URS0001A24434_12908/1-69",
"URS0001A23CE4_12908/1-61",
"URS0001A24016_1210908/1-64",
"URS0001A24276_1227460/1-61",
"URS0001A23A27_1508454/1-61",
"URS0001A23A27_1227464/1-61",
"URS0001A2356E_1230453/1-61",
"URS0001A23A93_309800/1-61",
"URS0001A23A93_662480/1-61",
"URS0001A24688_662478/1-61"
] | [
"AGGGAACCAGCACGGCCGCAAAUCUGACUC-GCUCGGCG---------------------------------UCGA-----------------------------------------------------CGUCGGGC-UUC-GAGAUUGCGGAAGUGC",
"GUGGGAACAGUAUAGCCGCAAAUCUGACUC-GCGUG------------------------------------UGG---------------------------------------------------------UGCGC-U-U-GGGAUUGCG... | rfam_14_5_ref |
URS0001A24441_348780_1-50 | CCUGUCGACACAGGCUGGAAUGUGACCGGCUCCGCCGGUUGAACCACGAA | (((((....)))))..((.....(((((.......)))))...))..... | [
"URS0001A24441_348780/1-50",
"URS0001A23D59_12908/1-50"
] | [
"CCUGU------------------------------CGAC------------------------------------ACAG-G------CUGGAAUGU-GACCGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCC------------------... | rfam_14_5_ref |
URS0001A24446_12908_1-69 | GCGGUUCCGGUUCACGUCAAGCCUCCCUUUUGCAGGCACGCUCCCAUGCGAGCGGACGACCCGGCGGCC | ..(((.((((....((((....................................))))..))))..))) | [
"URS0001A24446_12908/1-69",
"URS0001A23555_12908/1-68",
"URS0001A243F7_12908/1-48",
"URS0001A233C5_12908/1-57",
"URS0001A23322_164756/1-56",
"URS0001A2422F_1795/1-57",
"URS0001A237F7_12908/1-57",
"URS0001A237F7_1449060/1-57",
"URS0001A237F7_700508/1-57"
] | [
"GCGG-UUCCGGUUCACGUC-----------------------------AAGCCUCCCUUUUGCAGGCACGCUCCCAUGCGAGCG-----------------------------------------GACGACCCGGCG-GCC",
"GCGG-UUCCGGUUCACGUCAGGCCCUCUAUGA----------------GGGCAGCGC-------------------------------------------------------UCCAGGCGGGCGCGACGACCCGGCG-GCC",
"GCGG-UUCCGGUUCACGUCGA... | rfam_14_5_ref |
URS0001A24453_12908_1-79 | CGGGAAUAAGCUUAGGAUUCCCGGCAGUUUGGCAGUGUUAAUAGCCUUUUCUUUGGCCGGAAUUGGCGGUUAGUGAAUC | ((((((...........))))))..............(((((.(((..((((......))))..))).)))))...... | [
"URS0001A24453_12908/1-79",
"URS0001A2413C_999422/1-79",
"URS0001A23FBC_12908/1-79",
"URS0001A23FBC_1122986/1-79",
"URS0001A232E6_12908/1-79",
"URS0001A2431E_12908/1-79",
"URS0001A23A37_12908/1-79",
"URS0001A2423D_12908/1-79",
"URS0001A24116_12908/1-77",
"URS0001A23FDC_12908/1-78"
] | [
"CGGGAAU----AAGCUUAGG--------AUUCCCG--GCAGUUUGGCAGUGUUAAUAGCC--UU--UUCU----------UUGGCC-GGAAU-UGGCGGUUAGUG-AAUC",
"CGGGAAU----AAGCUUAGA--------AUUCCCG--GUAGUUUGGCAGUGUUAAUAGCC--UU--UUCU----------UUGGCC-GGAAU-UGGCGGUUAGUG-AAUC",
"CGGGAAU----AAGCUUAGA--------AUUCCCG--GCAGUUUGGCAGUGUUAAUAGCC--UU--UUCU----------UUG... | rfam_14_5_ref |
URS0001A24458_1499681_1-36 | GUCCUGGUCGGAAACCAGGACGCGAUUCCAGAGGAG | ((((((((.....))))))))............... | [
"URS0001A24458_1499681/1-36",
"URS0001A24843_12908/1-31",
"URS0001A24A62_1118060/1-35",
"URS0001A23B98_1232436/1-35",
"URS0001A23DE5_633147/1-32",
"URS0001A23851_12908/1-33",
"URS0001A23892_12908/1-34",
"URS0001A238C2_12908/1-33",
"URS0001A2330F_12908/1-32",
"URS0001A23642_12908/1-32"
] | [
"GU-CCUGGUCGGAAACC-AGGAC--GCGAUUCCAGAGGAG",
"GG-CCUGGUCGGAAACC-AGGCC-------ACCUAUGGAG",
"GC-CCUGGUCGGUAACC-AGGAC---GAGAUCGUAAGGAG",
"GU-CCUGGUCGGUAACC-AGGAC---GCGAUGGUAAGGAG",
"GG-UCUGGUCGGAAACC-AGA-C-----AGGCAGAAGGAG",
"GU-CCUGGUCGGAAACC-AGGAC-----ACGAAGAAGGAG",
"GC-CCUGGUCGGAAACC-AGGGC----CCGAUAAAAGGA... | rfam_14_5_ref |
URS0001A2445B_1224164_1-88 | ACUCAGGCACGAUCUUUGCCGUGGGUUUCCUUAUGUGGGGACCCCGUGAGGAUGCGAAGAACCGACCUGAAGUUUCAAUCCUGAGGGA | (((((((.....(((((((((.((..................)))).......))))))).....)))).)))............... | [
"URS0001A2445B_1224164/1-88",
"URS0001A239DA_12908/1-55"
] | [
"ACUCAGGCACGAUCUUUGC--------------CGUGGGUUUCC------------------------UUAUGU--------------------------------------GGGGACCC-CGUGAGGAU--------------------GCGAAGAACCGACCUGAAGU-UUCAAUCCUGAGGGA",
"ACUUAGGCACGAUCC-----------------------------------------------------AUCACUGC-----------------------------------------------... | rfam_14_5_ref |
URS0001A24463_12908_1-32 | CUAUACCAAAGAAUUUGGUAUGGCGAAAGGAG | ((((((((.......))))))))......... | [
"URS0001A24463_12908/1-32",
"URS0001A233C2_12908/1-31"
] | [
"CUAUA-------CCAAA--------GAA------------------UUUGG-------UAUGG-C--GAAAGGAG",
"CUAUG-------UCA----------UGAAUU-----------------UGG-------CAUGG-C--GAAAGGAG"
] | rfam_14_5_ref |
URS0001A24469_1158606_1-33 | CUCUGGUGAAGCAAAUGAGCCAGGGCAAAGGAG | (((((((...........)))))))........ | [
"URS0001A24469_1158606/1-33",
"URS0001A2463B_1449342/1-33",
"URS0001A23456_1158607/1-33",
"URS0001A24469_12908/1-33",
"URS0001A24469_888066/1-33",
"URS0001A240B9_1123233/1-30",
"URS0001A240B9_45670/1-30",
"URS0001A23EC7_1227363/1-33",
"URS0001A238DF_1260356/1-33",
"URS0001A241D5_1328869/1-33"
] | [
"CUCUG-------GU-----------GAAGCAAAUGA-------------GC-------CAGGG-C---AAAGGAG",
"CUCUG-------GUUCAGC------AGAU---------------GC---AU-------CAGGG-C---AAAGGAG",
"CUCUG-------AUU----------CAGCA------------------AAU---GUUUCAGGG-C---AAAGGAG",
"CUCUG-------GU-----------GAAGCAAAUGA-------------GC-------CAGGG-C---AAAG... | rfam_14_5_ref |
URS0001A24472_12908_1-47 | CGGACAAACACGUCCGUAGGGAUGUGGCCGAAAGGCUGAACCAUAAA | (((((......)))))..((.....((((....))))...))..... | [
"URS0001A24472_12908/1-47",
"URS0001A23F16_12908/1-46",
"URS0001A23D81_12908/1-46",
"URS0001A23C73_12908/1-47",
"URS0001A24088_12908/1-46",
"URS0001A240ED_12908/1-47",
"URS0001A24047_12908/1-46"
] | [
"CGGAC------------------------------AAACA----------------------------------CGUCC-G------UAGGGAUGU-GGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAA-----------------... | rfam_14_5_ref |
URS0001A2447F_374933_1-51 | CGCGAGGCGUCAGUCCUUGAACUUGAUAGCGGCGUGGCUUUAAAUUGAGGU | ((((..((..(((.........)))...))..))))............... | [
"URS0001A2447F_374933/1-51",
"URS0001A24AF6_1304873/1-51",
"URS0001A246C1_1304890/1-51",
"URS0001A24337_1169410/1-51",
"URS0001A2387D_1298924/1-51",
"URS0001A2387D_1290393/1-51",
"URS0001A2387D_262727/1-51"
] | [
"CGCGAGGCGUCAG----------------------UCCUUGAAC------------------------------UUG-AUAGCGGCGUGGCUUUAAAUU----GAGGU",
"CACGCGGUGUC-AGUC-------------------UUU--------------------------------GAACUCG-AUAGCGGCGUGGCUUCAAAUC----GAGGU",
"CAUGCGGUGUCAG-U--------------------CUAAGU-------------------------------ACUUG-AUAGCGGCA... | rfam_14_5_ref |
URS0001A24494_12908_1-86 | CUGACCAGGACGCAUGGGUCGACGUUCGUGCAACGAGCCCCUCUCCUUACAACCUGACGGUAGUAAGGAGAUGCGACAAAAGUCAG | (((((...(.(((..((((...((((.....)))).)))).(((((.(((.((......)).))).))))).))).)....))))) | [
"URS0001A24494_12908/1-86",
"URS0001A23397_12908/1-80",
"URS0001A247E6_12908/1-80",
"URS0001A23A50_12908/1-80",
"URS0001A23720_12908/1-80",
"URS0001A23D37_12908/1-80",
"URS0001A23D35_12908/1-80",
"URS0001A246B4_12908/1-76"
] | [
"CUGAC-CAGGACGCAU----GGGUCGAC---GUU-----CGUGC---------AAC-GAGCCCC-----UCUCCU-----UACAACC------------UGAC---------------------GGUAGUA-----------AG-GAGAU-----GCGACAAAA------GUCAG",
"CUGAC-CAGGACGCAU----GGGUCGAC---GUU-----CGUGC---------AAC-GAGCCCCU----UCCUC------CUGC---------------UGAU------------------------GCAG---... | rfam_14_5_ref |
URS0001A244A1_12908_1-62 | UGCCAAGAACCAUGAGGAAAUUGUCUCCCCUUAUGGAUCUGGUAAAUUAACCAAUGAAGGAG | ..(((.((.((((((((...........)))))))).))))).................... | [
"URS0001A244A1_12908/1-62",
"URS0001A23D9F_12908/1-62",
"URS0001A2449F_12908/1-62",
"URS0001A2358B_12908/1-62",
"URS0001A23CCA_12908/1-62"
] | [
"UGCCAAGAACCAUGAGG----AAAUUGUCUCCCCUUAUGGAUCUGGUAAAUUAACCAAUGA------------------------------------------------------------AGGAG",
"UGCCAAGAACCAUGAGG----AAAUUGUCUCCCCUUAUGGAUCUGGUAAAUUAACCAACGA------------------------------------------------------------AGGAG",
"UGCCAAGAACCAUGAGG----AAAUUGUCUCCCCUUAUGGAUCUGGCCAAU... | rfam_14_5_ref |
URS0001A244A3_12908_1-55 | GAAAGGCCGUAUUCGUCUUAUACGGCUGGAUGCGACAGAAAGCAUCCCAUUCAAG | ....((((((((.......))))))))((((((........))))))........ | [
"URS0001A244A3_12908/1-55",
"URS0001A23910_12908/1-51",
"URS0001A23D7C_12908/1-53"
] | [
"GAAAGGCCGUAU--UCGUCUU--------------------------------------------------AUA-CGGCUGGAUGC----------------------------------GACAGAAA------------------------------------------------------------------------------------------------------GCAUCCCAU----UCAAG",
"GAAAGGCCGU----UCAUCGUCGU-------------------------------------... | rfam_14_5_ref |
URS0001A244AC_12908_1-103 | UGAUAGCUGUGAAGUGGGAGGUUGCUACUUUCAUUUUUAAUUUAAAAGAUAGAAAGUAGGUUUUCACACUGAGCGAAGGUCAUGUUACUAAAACUGGCGACAA | .............(((.((((...(((((.........................)))))..)))).))).........(((..((((.......))))))).. | [
"URS0001A244AC_12908/1-103",
"URS0001A2485F_679200/1-87",
"URS0001A23AE2_12908/1-86"
] | [
"UGAUAGCUGUGAAGUGGG-AGGUUGCUACUUUC--------------------AUUUUU--------AAUUUA--------------AAAGAU---AGAAAGUAG-GU--U-UUCACACUGAGCGAAGGUCAU-----G--UUACUAAAAC--------------UGGC--------------GACAA",
"UGAUAGCUGUGAAGCGUG-AGGUUGCCGUUCCUGUUGG--------------------------------------------------------------GAUGGGGU--U-UUC-CGUGG... | rfam_14_5_ref |
URS0001A244C3_12908_1-39 | GAUUGCAUAUUUACCUUACCCUCUCUGUAAUCGCGGCUG | (((((((..................)))))))....... | [
"URS0001A244C3_12908/1-39",
"URS0001A23F4F_12908/1-38",
"URS0001A24220_12908/1-39",
"URS0001A2492C_12908/1-33",
"URS0001A2431F_12908/1-33",
"URS0001A23AD4_12908/1-34",
"URS0001A24762_1158294/1-34",
"URS0001A247D1_12908/1-39",
"URS0001A24249_12908/1-34",
"URS0001A23770_12908/1-34"
] | [
"GAUUGCA--------------------------UAUUUACCUUACCCUCUC---UGUAAUCGCGG-CU-G",
"GAUUGCA---------------------------CAUUCACACUACCUCUC---UGUAAUCGCGG-CU-G",
"GAUUACA--------------------------CAAAGACCUUAUCCUCUC---UGUAGUCGCGG-CU-G",
"GAUUACA--------------------------------CAACGACCUUUC---UGUGAUCGCGG-CU-G",
"GGUUGCA----... | rfam_14_5_ref |
URS0001A244C5_12908_1-119 | AGCACUGUGUGAACGGUGUAAUCAUACGUAAGUCCGACGUGCUGGAUUGCAGAGUUUUUCUGCAGAUCCCUGAACAAUCAGGGGAAGGCACUGCCCGAAAAACCGGGCUCAGGGAUUAC | .((((((......))))))........((((..((...(((((...........................................))))).(((((......)))))....)).)))) | [
"URS0001A244C5_12908/1-119",
"URS0001A23C96_521011/1-117"
] | [
"AGCACUGU-----GUGA---------------ACGGUGUA---AUCAUACGUAAGUCCGA--CGUGCUGGA-------UUGCAGAGUUUUUCUGCAGAUCCCUGAACAAUCAGGG-GAAGGCACUGCCCG-------AAAAAC-------------CGGGCUCAGGGAUUAC",
"AGCACUGU-----GUGA---------------ACGGUGUA---AUCAUACGUAAGUCCGA--CGUGCCGGA-------UUGCAG-UUUUU-CUGCAGAUUCCUGAACAAUCAGGG-GAUGGCACUGCCCAG------... | rfam_14_5_ref |
URS0001A244C9_1210908_1-88 | CCCGUGACCCGUACGGGAACGGGACGAAAUGUGGUUGCGCGGCGAGGACGACGACGUGUCGUCUUCGUUGGCGGAACUGAAUCGCAAG | (((((.............)))))..((.....((((......................................))))...))..... | [
"URS0001A244C9_1210908/1-88",
"URS0001A23ADF_12908/1-65"
] | [
"CCCGUGACCC-------------------------GUAC-------------------------------GGGA-ACGG-G------ACGAAAUGU-GGUUGCGC-GGCGAGGACGAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGU----------------... | rfam_14_5_ref |
URS0001A244D3_1433844_1-79 | UGAGAAAGCGCUUAGAAUUCUCAGCAGUUCAGUGGUGUUAAUAGCGUUCUCUCUGGCCUGAUGACGCGGUUAGUGAAUC | ((((((...........))))))..............(((((.(((((.((........)).))))).)))))...... | [
"URS0001A244D3_1433844/1-79",
"URS0001A23C29_12908/1-79",
"URS0001A2393B_12908/1-79",
"URS0001A2438C_12908/1-79",
"URS0001A24A13_12908/1-79",
"URS0001A23E52_12908/1-79",
"URS0001A23E52_702438/1-79",
"URS0001A23E52_1236497/1-79"
] | [
"UGAGAAAGC--GCUUA----------GAAUUCUCA--GCAGUUCAGUGGUGUUAAUAGCG--UU--CUC----------UCUGGCC-UGAUG-ACGCGGUUAGUG-AAUC",
"UGAGAAAGC--GCUUA----------GAAUUCUCA--GCAGUUCAGUGGUGUUAAUAGCG--UU--CUCU----------CCGGCC-AGAUG-ACGCGGUUAGUG-AAUC",
"UGAGAAAGC--GCUUA----------GAAAUCUCA--GCAGUUCAGUGGUGUUAAUAGCG--UU--CUCU----------CUG... | rfam_14_5_ref |
URS0001A244E6_12908_1-92 | GGGGACCUUCGGGGCCCUAUACCAAGGGGUGGGUUCGACCCGCCCUACAUAACCGGCAGGGAAACCUGUCGAAGCUAAACGGAAGACAGAAA | ((((.(((...))))))).........((((((((...........................))))))))...................... | [
"URS0001A244E6_12908/1-92",
"URS0001A24371_12908/1-89"
] | [
"GGGG-ACCU--UCG--------------------------------GGG----CCC-UAUACCAAGG-----GGUGG-----------GUU-------------------------CGACCCGCCCUACAUAACCGGCAGGGA---------------------------------------------------AAC-----------------------C-UGUCG-----A-AGCUAAACGGA-AGACAGA-AA",
"GGGG-ACCU--UCG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A244EC_1123024_1-59 | CCGGUUCCGGUUCACCCUCGGUGCCGCGCUCGUCGAGCCGCACCAGGGACCCGGCGACC | ..(((.((((....((((.(((...................)))))))..))))..))) | [
"URS0001A244EC_1123024/1-59",
"URS0001A24855_12908/1-50",
"URS0001A24035_12908/1-45",
"URS0001A233C0_12908/1-49",
"URS0001A241EC_12908/1-45",
"URS0001A23950_12908/1-42",
"URS0001A2418F_12908/1-52",
"URS0001A23AFE_12908/1-49",
"URS0001A244D9_1305843/1-56",
"URS0001A2351D_468556/1-42"
] | [
"CCGG-UUCCGGUUCACCCUCGGUGCCGCGCUC----------------GUC-------------------------------------------------------------GAGC-C-GCACC-AGGGACCCGGCG-ACC",
"UUGG-UUCCGGUUCACCUCAGCCGC-----------------------ACCGC------------------------------------------------------------------GCGUCUGGGGACCCGGCG-ACU",
"CUGG-UUCCGGUUCACCCGGC... | rfam_14_5_ref |
URS0001A24501_1227493_1-100 | CUGAUCAACGCGUGCGGGUCAAUUGCGGCUUGCAACACCCGAUCUCCCUCAACGUACCGCCGAAAAUGGCGGUCUCCGAGGGAGAGCGCGUGACUAUCAG | (((((...(((((..((((...(((((...))))).))))..(((((((...(........................))))))))))))).....))))) | [
"URS0001A24501_1227493/1-100",
"URS0001A24B1E_12908/1-100",
"URS0001A249DB_12908/1-100",
"URS0001A2320C_1455608/1-100",
"URS0001A239E4_12908/1-100",
"URS0001A231BB_12908/1-100",
"URS0001A24445_12908/1-100",
"URS0001A2354C_1227498/1-100",
"URS0001A24125_1227497/1-100",
"URS0001A246B8_1227492/1-100"... | [
"CUGAU-CAACGCGUGC----GGGUCAAU---UGCG----GCU----------UGCA-ACACCCGA----UCUCC------CUCAACG--UACCGCCG--AAAA-----------UGGCGGUCUCCG---AG------------G-GAGA------GCGCGUGACU-----AUCAG",
"CUGAU-CGGCGCGUCC----GGGUCAAU---UGCG----GCU----------UGCA-ACACCCGA----UCUCG------CUCAACGUGCCUCCA----CGAA-------------UGGAGGUU-ACGGAG---... | rfam_14_5_ref |
URS0001A2450D_12908_1-69 | UAUCUUUGCACCCGCUAUUCCUAUGAGUGGAAUUGCUACAUAAUAAUUAUUUAACUAAAUAUUAGCAUG | .............((.(((...........))).))................................. | [
"URS0001A2450D_12908/1-69",
"URS0001A24123_12908/1-69",
"URS0001A234EC_12908/1-69",
"URS0001A239FC_12908/1-69",
"URS0001A23692_1094466/1-65",
"URS0001A23EEB_12908/1-56",
"URS0001A23F12_12908/1-56",
"URS0001A240AE_1107311/1-65"
] | [
"UAUCU-UUGCACCC-------------GCUAUUCC----------UAUGAGU--------------GGAAUUGC--------------------------------------UAC-AUAAU-AAUUAUU---UAACU--AAAUAUUAGCAUG",
"UAUCU-UUGCACCC-------------GCUAUUCC----------UAUGAGU--------------GGAAUUGC--------------------------------------UAC-AUAAU-AAUUAUU---UAACU--AAAUAUUGGCAUG",
... | rfam_14_5_ref |
URS0001A24518_12908_1-77 | GGGGGUAAAUCCUUAGAGCCCCCAGCGUGGCCGUGUUAAUAGUGGUGUCUUUGGCCGGGCAUCAUGGUUAGUGAAUC | ((((((...........))))))............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A24518_12908/1-77",
"URS0001A242E6_12908/1-75",
"URS0001A23FAF_12908/1-74",
"URS0001A24374_246198/1-76",
"URS0001A241AC_12908/1-76",
"URS0001A241AC_1236508/1-76",
"URS0001A236CA_12908/1-76",
"URS0001A23CBE_12908/1-76",
"URS0001A23CCD_12908/1-75",
"URS0001A243B9_12908/1-75"
] | [
"GGGGGU-----AAAUCCUUAGA-------GCCCCC----AGCGUGGCCGUGUUAAUAGUG--GU--GUCU----------UUGGCC-GGGCA-UCAUGGUUAGUG-AAUC",
"UGGGG------GAAGUCUUAGAA-------CCCCA-----UGGAUGCCGUGUUAAUAGCG--AU--GCCU----------UUGGCC-GGGCA-UGGCGGUUAGUG-AAUC",
"GGGGU------GAACUUAGA----------GCCCC---GUGGAUGUGCGUGUUAAUAGCC--GU--GCCU----------UUG... | rfam_14_5_ref |
URS0001A2451A_12908_1-58 | CGGCGGCUCGCCUGAGCCGCCGGCCCACCUACCCGAGUACCUGACACGGCCCGGGAGA | (((((((((....)))))))))......((.((((.((..........)).)))))). | [
"URS0001A2451A_12908/1-58",
"URS0001A2478A_12908/1-51"
] | [
"CGGCGGCUC-------GCCU--------------------------GAGCCGCCGGCCCA--CCUA-CCCGAGUACCUGACACGGCCCGGG--AGA",
"CGGCCGGC--------GUCC---------------------------GCCGGUCG-------UCUA-CCCGGGUACCUGACACGGCCCGAG--AGA"
] | rfam_14_5_ref |
URS0001A2451B_12908_1-37 | AUUAAUAACCGAGGGUCGGGCACCCUACAAAAUUAAU | ((((((.....(((((.....))))).....)))))) | [
"URS0001A2451B_12908/1-37",
"URS0001A23426_12908/1-35",
"URS0001A23FD1_12908/1-35",
"URS0001A24113_12908/1-36",
"URS0001A23FE0_12908/1-31",
"URS0001A236B3_12908/1-36",
"URS0001A241E9_1197874/1-37",
"URS0001A2331F_12908/1-36",
"URS0001A23C5A_867900/1-36",
"URS0001A249A4_28188/1-36"
] | [
"AUUAAUAACCGAGGGUCGGGCACCCUACAAAAUUAA-U",
"AUUAUUAACC-GAGGUCGGGCACCUCAAA-AAAUAA-A",
"AUUAAUAACC-GGGGUCGUGUACCCCAAA-AUUUAA-U",
"AUUAAUAACC-AGGGUCGGGAACCCUUAAUAUUUAA-U",
"AUUAAUAACA-AGGGUCGGGCACCCU-----AUAAA-U",
"AUUAAUAACG-AGGGUCGGGCACCCUGCAAAAUUAA-U",
"AUUAAUAACCGAGGGUCGGGCACCCUACAUAAUUAA-U",
"AUUAAUA... | rfam_14_5_ref |
URS0001A24532_12908_1-103 | UGAUAGCGUUGAAGCGUGAGGUUGCCACAUUAUCCAGUGAUGUGGGUUUUCCGUGGAGCGAAUGUCAGUAGGCUGCAUAGCGGCCACAAAAUCAUGACGACAA | .............(((.((((...(((((...........)))))..)))))))........((((.....((((.....))))..............)))). | [
"URS0001A24532_12908/1-103",
"URS0001A24532_1280697/1-103",
"URS0001A24532_1280700/1-103",
"URS0001A24161_12908/1-86"
] | [
"UGAUAGCGUUGAAGCGUG-AGGUUGCCACAUUAUCCAGUGA-----------------------------------------------------------UGUGG-GU--U-UUC-CGUGGAGCGAAUGUCAGUAG--G--CUGCAUAG----------------CGGCCACAAAAUCAUGACGACAA",
"UGAUAGCGUUGAAGCGUG-AGGUUGCCACAUUAUCCAGUGA-----------------------------------------------------------UGUGG-GU--U-UUC-CGUGG... | rfam_14_5_ref |
URS0001A24537_12908_1-34 | CGGUUAUCGAAGGAGAAAGCCUUAAUUCAUAACG | (.(((((.(((((......))))....))))))) | [
"URS0001A24537_12908/1-34",
"URS0001A239F8_12908/1-34",
"URS0001A24257_12908/1-34",
"URS0001A235F2_12908/1-32",
"URS0001A23413_12908/1-32",
"URS0001A23413_1125720/1-32",
"URS0001A24AF4_12908/1-32",
"URS0001A246EA_12908/1-33",
"URS0001A23E48_12908/1-33",
"URS0001A23601_313596/1-33"
] | [
"CGGU-U-AUCGAAGGAGAAAG----------CCUUAAU-UC-A-UAAC--G",
"U-GU-U-AUCGGAGGAGUUAGA---------CCUUAAU-UC-A-UAAC--A",
"U-GU-U-AUCGAAGGAGUUAGA---------CCUUAAU-UC-A-UAAC--A",
"A-GU-U-AUCGAAGGAUAAG-----------CCUUAAU-UC-A-UAGC--U",
"U-GU-U-AUCGAAGGAAUG------------CCUUAAU-UC-A-UAAC-UA",
"U-GU-U-AUCGAAGGAAUG-----------... | rfam_14_5_ref |
URS0001A24538_12908_1-62 | CUGUAAAGAUAUGGUGGCUGUAGAGUCAUCCCCAUAAUCUGGAAAUGGGCCAUAUCGAGGAA | .......((((((((((((....)))))).(((((.........))))).))))))...... | [
"URS0001A24538_12908/1-62",
"URS0001A23C78_1319815/1-55",
"URS0001A23C78_1340502/1-55",
"URS0001A240B7_12908/1-59",
"URS0001A233F9_12908/1-59",
"URS0001A234E0_12908/1-62"
] | [
"CUGUAAAGAUAUG-GU-G-GCUGUAG-AGU-CAUC--CCCAU-----------------AAUCUGGAA------------AUGGGCCAU-AUC--GAGG--AA",
"CUGUAAAGGUAUG-UU-AGGCUGUAG-AGC-UAGUA-CUC-------------------GAAA-------------------GAGGCAU-ACC--GAAG--AA",
"CUGUAAAGGUAUG-UU-AGGCUGUAG-AGC-UAGUA-CUC-------------------GAAA-------------------GAGGCAU-ACC--GA... | rfam_14_5_ref |
URS0001A24539_12908_1-79 | CGAAGAUAACGCUUAGAUUCUUCGCAGCUCUUUCGUGUUAAUAGUGGUAUUCAUGGCCGGAUAUCAUGGUUAGUGAAUC | ((((((............)))))).............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A24539_12908/1-79",
"URS0001A2450C_12908/1-78",
"URS0001A23F4B_12908/1-78",
"URS0001A236FB_12908/1-78",
"URS0001A2428D_12908/1-78",
"URS0001A24228_12908/1-78",
"URS0001A24692_12908/1-78",
"URS0001A23B3E_12908/1-78",
"URS0001A24017_12908/1-78",
"URS0001A23733_12908/1-78"
] | [
"CGAAGA-----UAACGCUUAGAU------UCUUCG---CAGCUCUUUCGUGUUAAUAGUG--GU--AUUC----------AUGGCC-GGAUA-UCAUGGUUAGUG-AAUC",
"GAAGAU-----AAUACUUAGA--------AUCUUC--AUAGCUUCUUCGUGUUAAUAGUG--AU--AUUC----------AUGGCC-GAAUA-UCAUGGUUAGUG-AAUC",
"GAAGAU-----AAUACUUAGA--------AUCUUC--AUAGCUUCUUCGUGUUAAUAGUG--AU--AUUC----------AUG... | rfam_14_5_ref |
URS0001A24548_12908_1-64 | AGCCAUGAACCGUGAGGAAAAUGUCUCCCCUUGCGGAUCGGCGAUAAAAAAAAUGACAAAGGAG | ...(..((.((((((((...........)))))))).)).)....................... | [
"URS0001A24548_12908/1-64",
"URS0001A2330A_12908/1-57",
"URS0001A23B79_12908/1-57",
"URS0001A23395_12908/1-60"
] | [
"AGCCAUGAACCGUGAGG----AAAAUGUCUCCCCUUGCGGAUCGGCGAUAAAAAAAAUGACAA----------------------------------------------------------AGGAG",
"CCCCCUGAACCGUGAGA-----AAACGG--CCUCUUGCGGAUCGGGUAAUUUAAAAUAA--------------------------------------------------------------AGGAG",
"GACCCAGAACCGCGAGG-----AAACGG--CCUCUUGCGGAUCGGGAAAUU... | rfam_14_5_ref |
URS0001A2454F_1336240_1-53 | CAUGUGGUGCCUGACUUCGGGUUGGGAGUGCGACGUGGCCUUAAACUUGAGGU | (((((.((.((((((.....))))))...)).)))))................ | [
"URS0001A2454F_1336240/1-53",
"URS0001A23618_1515746/1-53",
"URS0001A23A8C_1579504/1-52",
"URS0001A23463_314608/1-53",
"URS0001A23463_637905/1-53",
"URS0001A24409_1236542/1-53",
"URS0001A24409_225849/1-53",
"URS0001A239D0_1565129/1-53",
"URS0001A239D0_1521167/1-53",
"URS0001A239D0_323850/1-53"
] | [
"CAUGUGGUG-CCUGAC-------------------UUCGG------------------------------G-UUGGG-AGUGCGACGUGGCCUUAAACUU---GAGGU",
"CAUGUGGUG-CUCAAC-------------------UUCGG------------------------------G-UUGGG-AGAGCGACAUGGCCUUAAACUU---GAGGU",
"CAUGUGGUG-UCCGAC-------------------UUCGG------------------------------G-UUGGA-AGAGCGACA... | rfam_14_5_ref |
URS0001A24555_12908_1-34 | CUCUGGAUUCGAAGGCAAUCCAGGGCGGAAAGAG | ((((((((.........))))))))......... | [
"URS0001A24555_12908/1-34",
"URS0001A23BF8_12908/1-34",
"URS0001A23AE1_12908/1-34",
"URS0001A2359C_12908/1-34",
"URS0001A24769_717606/1-34",
"URS0001A245AD_1430331/1-32",
"URS0001A245AD_1382357/1-32"
] | [
"CUCUG-------GAUU---------CGAAGGC---------------AAUC-------CAGGG-C--GGAAAGAG",
"CUCUG-------GAUUC--------GCAGG----------------GAAUC-------CAGGG-C--GGAAAGAG",
"CUCUG-------GAUUC--------GCGGG----------------GAAUC-------CAGGG-C--GGAAAGAG",
"CUCUG-------GAUUC--------GCGUG----------------GAAUC-------CAGGG-C--GGAAA... | rfam_14_5_ref |
URS0001A2457C_12908_1-65 | GGGGUCCUUUGGGCCCUAUAAUAUGCAAGACCCAACUGUUUUGCACAUAAAACGGAAGACAGAAA | ((((.((....))))))......((((((((......)))))))).................... | [
"URS0001A2457C_12908/1-65",
"URS0001A24029_12908/1-65"
] | [
"GGGG-UCC---UUUG--------------------------------GG----CCC-UAUAAUA--------UGCAA-----------GACC------------------------CAAC-------------------------------------------------------------------------UGUU-----------------------U-UGCA---CAUA-----AAACGGA-AGACAGA-AA",
"GGGG-ACCU--UUG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A24585_1230460_1-77 | CCUGCGCAGCACGUCUCUGUGCUACAGGUCGGGAUGUGAUCCGCGGGGCAUGGCCCCGGUCGGGAUUGAACCAGAAA | ((((....................))))..((.....(((((....................)))))...))..... | [
"URS0001A24585_1230460/1-77",
"URS0001A23532_12908/1-58",
"URS0001A24A4C_1227499/1-62",
"URS0001A23312_12908/1-58",
"URS0001A23BFF_12908/1-58",
"URS0001A246F3_1227498/1-70",
"URS0001A235A1_1227497/1-70",
"URS0001A2424A_694430/1-70",
"URS0001A23A7D_12908/1-60",
"URS0001A23AD8_268739/1-50"
] | [
"CCUGCGCAGCAC-----------------------GUCUCU---------------------------GUGCUA--CAG-G------UCGGGAUGU-GAUCC---GCGGGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUG------------------... | rfam_14_5_ref |
URS0001A2458D_12908_1-103 | AGGCACCUACGGGGGCCUAUACCACCUGCCACCUUCGGGGGGCUUACAUCGCGGGGGAUGGCCAUCGGGCCGAACUCGCACUGCUAGAAACGGAAGACAGUAA | ((((.(((...))))))).......(.(.(...............................................)..).).................... | [
"URS0001A2458D_12908/1-103",
"URS0001A24466_266809/1-66",
"URS0001A24466_12908/1-66",
"URS0001A24727_1290553/1-76",
"URS0001A23B23_12908/1-66",
"URS0001A23D6D_12908/1-69",
"URS0001A23AFB_388399/1-64",
"URS0001A24AAD_12908/1-65",
"URS0001A249DD_12908/1-67",
"URS0001A24332_12908/1-65"
] | [
"AGGC-ACCU--ACG--------------------------------GGG----GCC-UAUACCAC-------CUGCC-----------------------------------------ACCUUCGGGGGGCUUACAUCGCGGGGGAUGGCCAUCGGGCCGAACUC-------------------------------------------------------GCACUG---C--U-AG--AAACGGA-AGACAGU-AA",
"GGCC-ACCU--CCG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A24590_752555_1-78 | GAAGAUGCAUCUUAGAGUCUUCACAGCUUUCUUGUGUUAAUCGUGUUAUCUUUGGCCGGGUAUCACUGUUAGUGAAUC | ((((((..........))))))..............(((((.(((.(((((......))))).))).)))))...... | [
"URS0001A24590_752555/1-78",
"URS0001A24590_12908/1-78"
] | [
"GAAGAUGC---AUCUUA----------GAGUCUUC--ACAGCUUUCUUGUGUUAAUCGUG--UU--AUCU----------UUGGCC-GGGUA-UCACUGUUAGUG-AAUC",
"GAAGAUGC---AUCUUA----------GAGUCUUC--ACAGCUUUCUUGUGUUAAUCGUG--UU--AUCU----------UUGGCC-GGGUA-UCACUGUUAGUG-AAUC"
] | rfam_14_5_ref |
URS0001A2459E_12908_1-69 | UAUUUUUGCACUCGAAUUAUGAUAGACAUGAUUCAUACUAUAAAAAUCAUUUACAAAAAUAUUAGCAUG | .............((((((.........))))))................................... | [
"URS0001A2459E_12908/1-69",
"URS0001A245EB_12908/1-68",
"URS0001A23AE0_12908/1-68",
"URS0001A24845_12908/1-68",
"URS0001A2321D_12908/1-68",
"URS0001A2490F_12908/1-68",
"URS0001A23C9E_12908/1-68",
"URS0001A2332F_12908/1-67",
"URS0001A23B46_12908/1-68",
"URS0001A24836_12908/1-68"
] | [
"UAUUU-UUGCACUC-------------GAAUUAUG----------AUAGA----------------CAUGAUUC-------------------------------------AUACUAUAAA-AAUCAUU---UACAA--AAAUAUUAGCAUG",
"UAUUU-UUGCAUCC-------------GAAUUAUG----------AUAAA----------------CAUAAUUC-------------------------------------AUAC-AUAAA-AAUCAUU---UACAA--AAAUAUUAGCAUG",
... | rfam_14_5_ref |
URS0001A245A6_12908_1-35 | CUUUAAAUCCGCAUGUGAUUUAAGGCGGAAGGGAG | ((((((((.........)))))))).......... | [
"URS0001A245A6_12908/1-35",
"URS0001A2361D_12908/1-34",
"URS0001A2401B_12908/1-32"
] | [
"CUUUA-------AAUC---------CGCAUGU---------------GAUU-------UAAGG-C-GGAAGGGAG",
"CUUUA-------AACCA--------GCUCA----------------UGGUU-------UAAGG-C--GGAAGGAG",
"CUUUG-------AAUGA--------AGG------------------UCAUU-------CAAGG-C--GGAAGGAG"
] | rfam_14_5_ref |
URS0001A245AB_58123_1-73 | CCGGACGGCCGGGGGCGCGUUCCCCGGCCGUUCCGGAACCAGCUGACACCGGUACCUGGUACGGCCGGUGCAG | ((((((((...................))).)))))......(((.(((((((..........)))))))))) | [
"URS0001A245AB_58123/1-73",
"URS0001A24715_1394178/1-55",
"URS0001A241BF_12908/1-56",
"URS0001A249EC_500153/1-59",
"URS0001A23E28_68042/1-50",
"URS0001A24B2F_1463857/1-56",
"URS0001A249EB_1206101/1-58",
"URS0001A249EB_1169158/1-58",
"URS0001A249EB_1169155/1-58",
"URS0001A24130_67263/1-57"
] | [
"CCGGA-CGGCCGGGGGCGCGU------------------UCCCCGGCCGUUCCGGAACCAG-CUGA-CACCGGUACCUGGUACGGCCGGUG--CAG",
"GUUCCCCGG-------CCGU--------------------------CCU-GGAACCAG----CUGA-CACCGGUACCUGAUACGGCCGGUG--CAG",
"GGUCGGGGC-------GGCU--------------------------GCCCCGGCUUCCA---CUAG-CUCCGGUACCUGGUACGGCCGGGG---AG",
"CCGCCGGGG... | rfam_14_5_ref |
URS0001A245AC_1227454_1-76 | CCUGUUCGGCAACCGACGCCGCCACAGGCCGGGAUGUGAUCCGCGGGGCCCCGCCCCGUUGGGAUUGAACCAGGAA | (((((..................)))))..((.....(((((...................)))))...))..... | [
"URS0001A245AC_1227454/1-76",
"URS0001A23405_1227491/1-74",
"URS0001A2341B_1230458/1-74",
"URS0001A249FB_29540/1-74",
"URS0001A232D8_12908/1-71",
"URS0001A2370B_358396/1-62",
"URS0001A231DA_12908/1-62",
"URS0001A24230_1227492/1-64",
"URS0001A235BD_1227493/1-64",
"URS0001A242A4_797304/1-70"
] | [
"CCUGU-UCGGC------------------------AACCGAC---------------------------GCCGCCACAG-G------CCGGGAUGU-GAUCC--GCGGGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCC------------------... | rfam_14_5_ref |
URS0001A245B4_33876_1-49 | GCGGUUCCGGUUCCCGCCUCGACGAGCCCGUCGAGACGACCCGGCGACC | ..(((.((((....((.(((((........))))).))..))))..))) | [
"URS0001A245B4_33876/1-49",
"URS0001A24A5E_1288083/1-46",
"URS0001A2357D_12908/1-42",
"URS0001A242A7_1087469/1-41",
"URS0001A242A7_1091046/1-41",
"URS0001A242A7_36809/1-41",
"URS0001A242A7_1001714/1-41",
"URS0001A2488C_1463821/1-41",
"URS0001A23999_12908/1-41",
"URS0001A2398E_12908/1-41"
] | [
"GCGG-UUCCGGUUCCCGCCUCGACG-----------------------AGCC-------------------------------------------------------------------CGUCGAGACGACCCGGCG-ACC",
"UCGG-UCCCGGUUCACGUCGCACC------------------------AGCA--------------------------------------------------------------------GGUGGGACGACCCGGC--ACC",
"CAGG-UCCCGGUUCACGUCAU... | rfam_14_5_ref |
URS0001A245B7_12908_1-45 | GCGGACAAGGUCCGCUAGGAUGUAACCGUAAGGUUGAACUAUAAA | (((((.....)))))..((....((((....))))...))..... | [
"URS0001A245B7_12908/1-45",
"URS0001A23DE8_12908/1-45"
] | [
"GCGGAC-----------------------------AAG------------------------------------GUCCG-C------UAGG-AUGU-AACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUAA-----------------... | rfam_14_5_ref |
URS0001A245BB_679901_1-55 | CGGGAUAUAUUCCCGUAGGGAUGUGAUUCGUUAAACCGAUGAAUUGAACCAUGAA | (((((.....)))))..((.....(((((...........)))))...))..... | [
"URS0001A245BB_679901/1-55",
"URS0001A240B6_12908/1-53"
] | [
"CGGGA------------------------------UAUAU-----------------------------------UCCC-G------UAGGGAUGU-GAUUCGUU---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACC----------------... | rfam_14_5_ref |
URS0001A245C4_12908_1-95 | GGGGACCUAUGGGGCCCUAUAACAUGAGGUGGGUUUCACCCACCCUACACAUAGGCGAAUUCAAGGAUUCGCCACUGCUAAACGGAAGACAGAAA | ((((.(((...))))))).........((((((((..............................))))))))...................... | [
"URS0001A245C4_12908/1-95",
"URS0001A23524_12908/1-89",
"URS0001A234ED_12908/1-94"
] | [
"GGGG-ACCU--AUG--------------------------------GGG----CCC-UAUAACAUGA-----GGUGG-----------GUU-------------------------UCACCCACCCUACACAUAGGCGAAUUCAAG------------------------------------------------GAU-----------------------U-CGCCA--C--U--GCUAAACGGA-AGACAGA-AA",
"GGGG-ACCU--UCG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A245C5_12908_1-62 | CCUGUCACAGGACAGGACGGGAUGUGAACCCCGAGACCGACUCGCACGGUUUGAACCACUCG | (((((......)))))..((.....(((((.................)))))...))..... | [
"URS0001A245C5_12908/1-62",
"URS0001A24799_12908/1-51"
] | [
"CCUGUC-----------------------------ACAG-----------------------------------GACAG-G------ACGGGAUGU-GAACC--CCGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGA----------------... | rfam_14_5_ref |
URS0001A245C6_1071085_1-77 | CCCGCCGCCCGGCCGACGCCGGUCGGGGACGGGACGAGAUGUGGUUCCGCGGCGUCGUCGCGGGACUGAAUCGCAAG | ((((.........................))))..((.....(((((...............)))))...))..... | [
"URS0001A245C6_1071085/1-77",
"URS0001A249C5_1261545/1-64",
"URS0001A234E6_12908/1-48"
] | [
"CCCGCCGCCCGGCCG--------------------ACGC--------------------------CGGUCGGG-GACGG-G------ACGAGAUGU-GGUUCCGCGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUC------------------... | rfam_14_5_ref |
URS0001A245D2_2715674_1-63 | ACUCAGGCACGAUUCUCUCACUCUUAGCUGGGGGAAAGCGACCUGAAGUUCAAUCCUGAGGGA | (((((((.....(((((((..........))))))).....)))).))).............. | [
"URS0001A245D2_2715674/1-63",
"URS0001A23DCD_1724/1-63",
"URS0001A239C2_2715677/1-63",
"URS0001A245D2_553204/1-63",
"URS0001A245D2_43771/1-63",
"URS0001A238D4_38305/1-63",
"URS0001A24236_35755/1-61",
"URS0001A23F73_571915/1-54",
"URS0001A24808_12908/1-54"
] | [
"ACUCAGGCACGAUUCUCUC-------------------------------------------------ACUCUUAGCU------------------------------------------------------------------------GGGGGAAAGCGACCUGAAGU--UCAAUCCUGAGGGA",
"ACUCAGGCACGAUUCACGC--------------GGU--------------------------------GUA-------------------------------------------------ACC... | rfam_14_5_ref |
URS0001A245D6_12908_1-51 | CGCAUGGUGUUCGUGGAAAGCACGGAUGGCGAUGCGGCCCAUAUAUGAGGU | (((((.((..(((((.....)))))...)).)))))............... | [
"URS0001A245D6_12908/1-51",
"URS0001A23F6B_12908/1-49",
"URS0001A23B36_12908/1-50",
"URS0001A23ED1_12908/1-51",
"URS0001A249AE_1036674/1-51",
"URS0001A244FE_12908/1-51"
] | [
"CGCAUGGUGUUCGUG--------------------GAAAG--------------------------------CACGG-AUGGCGAUGCGGCCCAUAUAU----GAGGU",
"CGUAUGGUGUGCGGA--------------------GAGAG--------------------------------UCCGU-AUAGCGAUGCGGCCCAAUU------GAGGU",
"CGCAUGGUGUUCGUG--------------------GAAAG--------------------------------CACGG-AUGGCGAUG... | rfam_14_5_ref |
URS0001A245DE_12908_1-67 | GAAAGGUCACGGGAAAUUGUGGCUGGACGCAGUGAAGAAGGAUGAAGAUCCCGGCGUCCCAAUUUGA | ....((((((........))))))((((((.(...................).))))))........ | [
"URS0001A245DE_12908/1-67",
"URS0001A23BAA_658656/1-67",
"URS0001A23A23_12908/1-67",
"URS0001A23A23_658088/1-67",
"URS0001A247B3_12908/1-67"
] | [
"GAAAGGUCAC----GGGAAAUU---------------------------------------------------G-UGGCUGGACGCAG---UGAAGAA--GGAU----------------GAAG--------------------------------------------------------------------------AUCC--------------------------CGGCGUCCCAA----UUUGA",
"GAAAGGUCACGG--GAAA-------------------------------------------... | rfam_14_5_ref |
URS0001A245E9_252305_1-79 | GGCCACCUUCGGGGGGCUUAUCACAUAGGUCUUCGCGCCCGGAGGGGCAGGGGAUCGCUAGCUAAACGGAAGACAGAAA | ((((.(((...))))))).........(((((....(((......)))...)))))....................... | [
"URS0001A245E9_252305/1-79",
"URS0001A236D1_1579316/1-75",
"URS0001A23CF1_12908/1-74",
"URS0001A2362F_12908/1-76",
"URS0001A241E7_12908/1-67",
"URS0001A24419_12908/1-67",
"URS0001A23C8F_467661/1-66"
] | [
"GGCC-ACCU--UCG--------------------------------GGG----GGC-UUAUCACAUA-----GGUCUUCGC-------GCCC------------------------GGAG-------------------------------------------------------------------------GGGCAGG--------------------G-GAUCG--C--U-AGCUAAACGGA-AGACAGA-AA",
"GGCC-ACCU--UCG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A2460B_1365007_1-66 | CGUGUGGUACUUUGUUGAAUGAAAUAAUUCAUUCAAGCUGAGCAGCGACACGGCCUAAAUAGAGGU | (((((.((..((.(((..................).)).))...)).))))).............. | [
"URS0001A2460B_1365007/1-66",
"URS0001A24AEE_1278302/1-64",
"URS0001A24943_12908/1-65",
"URS0001A24AAB_12908/1-65",
"URS0001A24639_12908/1-65",
"URS0001A23741_12908/1-65",
"URS0001A24776_357804/1-65",
"URS0001A233AD_12908/1-65",
"URS0001A249F8_12908/1-65",
"URS0001A248B0_1123036/1-65"
] | [
"CGUGUGGUACUUUGUU------GAAUGA-------AAUAAU-------------------UCAUUC----AAGCUGA-GCAGCGACACGGCCUAAAUA-----GAGGU",
"CGUGUGGUACUCUGUU------GAUUGA-------AAUAA--------------------UUCAUCA---A-GCUGA-GCAGCGACACGGACCAAUA------GAGGU",
"CGUGUGGUACUUUGUU------GAGUGA-------AAUGAU-------------------UCUCUCA---A-ACAAA-GCAGCGAUG... | rfam_14_5_ref |
URS0001A2460E_1675527_1-78 | GGGGACCUUCGGGGCCCUUUAACAUAGGCGGGUCGGCUUUCUAACAUGGCCCGCCGUCUAGCUAACGGAAGAGAGCAA | ((((.(((...)))))))........((((((((.............))))))))....................... | [
"URS0001A2460E_1675527/1-78",
"URS0001A235A6_1415756/1-67"
] | [
"GGGG-ACCU--UCG--------------------------------GGG----CCC-UUUAACAUA------GGCGG-----------GUCG------------------------GCUUUCUAACA------------------------------------------------------------------UGGC-----------------------C-CGCCG-UC--U-AGC-UAACGGA-AGAGAGC-AA",
"AGGG-ACCU--UCG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A24619_1585974_1-37 | CUUUGAAGUUAGACAAAAAAUUUCAAGGCGGAAGGAG | ((((((((............))))))))......... | [
"URS0001A24619_1585974/1-37",
"URS0001A244C6_1050201/1-34",
"URS0001A23F0A_12908/1-34",
"URS0001A2363C_999415/1-34",
"URS0001A23B00_1658109/1-34",
"URS0001A24AF7_12908/1-34",
"URS0001A2396E_12908/1-33",
"URS0001A249CF_12908/1-31",
"URS0001A24056_12908/1-31",
"URS0001A24357_12908/1-34"
] | [
"CUUUG-------AAGUU--------AGACAAAA-------------AAUUU-------CAAGG-C--GGAAGGAG",
"CUUUA-------AAUCA--------GCAAA----------------UGAUU-------UAAGG-C--GGAAGGAG",
"CUUUG-------GAUU---------CGCAUGA---------------AAUC-------CAAGG-C--GGAAGGAG",
"CUUUG-------GAGUA--------GCAUA----------------UAUUU-------CAAGG-C--GGAAG... | rfam_14_5_ref |
URS0001A24624_2342_1-56 | CGCGUGGUGUCUGGUUAUAAAGUAGACCGGAUAGCGACGCGGCCUUACGAAGAGGU | (((((.((..((((((........))))))...)).)))))............... | [
"URS0001A24624_2342/1-56",
"URS0001A24081_1111728/1-51",
"URS0001A23CE3_1214065/1-54",
"URS0001A23FFF_343509/1-54",
"URS0001A247DA_12908/1-54",
"URS0001A24AA5_1239307/1-54",
"URS0001A2476A_1263550/1-53",
"URS0001A2476A_634503/1-53",
"URS0001A24366_667121/1-53",
"URS0001A245F8_1216966/1-53"
] | [
"CGCGUGGUGUCUGGUU-------------------AUAAAGUA---------------------------G-ACCGG-AUAGCGACGCGGCCUUACGAA----GAGGU",
"CGCGUGGUGUUCGG-C-------------------AAUAGU-----------------------------G-ACCGG-AUAGCGACGCGGCUUAAGA------GAGGC",
"CGCGUGGUGUGCGG-C-------------------GAAAAAU----------------------------G-ACCGU-AUAGCGACG... | rfam_14_5_ref |
URS0001A2463E_12908_1-55 | CGUGUGGUGUCUGGCAUAGGAUCAGAUAGCGACACGGCCUACAAAACACAGAGGU | (((((.((..(((((....).))))...)).)))))................... | [
"URS0001A2463E_12908/1-55",
"URS0001A2405F_12908/1-49",
"URS0001A23EB3_12908/1-50",
"URS0001A234A5_12908/1-54",
"URS0001A23E11_12908/1-52",
"URS0001A23F32_1279015/1-52",
"URS0001A23F32_511062/1-52",
"URS0001A23D79_12908/1-55",
"URS0001A2462A_1185651/1-50",
"URS0001A23D7B_218936/1-54"
] | [
"CGUGUGGUGUCUGG-C-------------------AUAG-------------------------------G-AUCAG-AUAGCGACACGGCCUACAAAACACAGAGGU",
"CGUGUGGUGUCUGUU--------------------GAAACA-------------------------------CAUAG-AUAGCGACACGGCCGACA-------GAGGU",
"CGUGUGGUGUCCGACU-------------------UCG--------------------------------G-GUUUG-AUAGCGACA... | rfam_14_5_ref |
URS0001A24656_12908_1-75 | GAAGGAUGUCUUAGGUCCUUCGGUCUCGUCGUGUUAAUAGCUGUACUUUUGGCCGAGUGCGGUGGUUAGUGAAUC | ((((((.........))))))............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A24656_12908/1-75",
"URS0001A23935_12908/1-75"
] | [
"GAAGGAU----GUCUUAG----------GUCCUUC----GGUCUCGUCGUGUUAAUAGCU--GU--ACUU----------UUGGCC-GAGUG-CGGUGGUUAGUG-AAUC",
"GAAGGAU----GUCUUAG----------GUCCUUC----GGUCUCGUCGUGUUAAUAGCG--GU--ACUU----------UUGGCC-GAGUG-CAGUGGUUAGUG-AAUC"
] | rfam_14_5_ref |
URS0001A24659_1451189_1-67 | ACUCAGGCACGACCACCUGCGCAACGCUAGCCGCUGUGGACCGACCUGAUGUACACAACCUAAGGGA | ((.((((.....((((..(((...)))........)))).....))))..))............... | [
"URS0001A24659_1451189/1-67",
"URS0001A240F3_306537/1-62",
"URS0001A23A38_38289/1-62",
"URS0001A2444F_525262/1-62",
"URS0001A2444F_38289/1-62",
"URS0001A23A29_38289/1-61",
"URS0001A24053_38289/1-61",
"URS0001A23453_38289/1-61",
"URS0001A24A28_38289/1-61",
"URS0001A23414_1267754/1-60"
] | [
"ACUCAGGCACGACCACC---------------UGCG--------------------------------CAA-------------------------------------------------CGCUAGCC----------------------GCUGUGGACCGACCUGAUGU-ACACAACCUAAGGGA",
"ACUCAGGCACGACCCGCGC-------------------------------------------------ACGUAAC------------------------------------------------... | rfam_14_5_ref |
URS0001A24666_12908_1-54 | GAAAGGCUGUAUGAACAUACAGCUGGGUGUCAUGCACUUGACGCCCCAGUUAGA | ....((((((((....))))))))((((((((......))))))))........ | [
"URS0001A24666_12908/1-54",
"URS0001A2334C_12908/1-52",
"URS0001A2331D_12908/1-52",
"URS0001A248C3_12908/1-50"
] | [
"GAAAGGCUGUAU--GAAC-----------------------------------------------------AUA-CAGCUGGGUGUCA--------------------------------UGCACU------------------------------------------------------------------------------------------------------UGACGCCCCAG----UUAGA",
"GAAAGGCUGUAUG-GGUG-------------------------------------------... | rfam_14_5_ref |
URS0001A2466E_12908_1-63 | GUGGACCUACGGGGCCAUAUAACCACAACGAUCAAUUGAUCGUUUAAAAACGGAAGACAGAAA | ((((.(((...)))))))........(((((((....)))))))................... | [
"URS0001A2466E_12908/1-63",
"URS0001A23A3E_12908/1-63",
"URS0001A236B6_12908/1-63",
"URS0001A237EE_12908/1-63"
] | [
"GUGG-ACCU--ACG--------------------------------GGG----CCA-UAUAACCAC------AACGA-----------UC--------------------------AAUU---------------------------------------------------------------------------GA-----------------------U-CGUU---UA-A-----AAACGGA-AGACAGA-AA",
"ACGG-ACCU--ACG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A24670_351160_1-67 | CGGGAUACGUUCCCGCCGGGAUGUGGCCUAUCCAUAUUCAUCAUGACAGGAUAGGUUGAACCAGGAA | (((((.....)))))..((.....(((((.......................)))))...))..... | [
"URS0001A24670_351160/1-67",
"URS0001A2438D_12908/1-55"
] | [
"CGGGA------------------------------UACGU-----------------------------------UCCC-G------CCGGGAUGU-GGCCUAUCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUAUUCAUCAUGACA------... | rfam_14_5_ref |
URS0001A2468F_12908_1-75 | ACGCAAACGGUGUUCAUGCGUGGCAUGAAGCCGCGAAAGCAGGGAUGCGCAAUACCUGCUUUCCGCCAUUUGCGC | .((((((.(((((((((((...))))))).....((((.((((...........)))).)))))))).)))))). | [
"URS0001A2468F_12908/1-75",
"URS0001A2468F_517417/1-75"
] | [
"ACGCAA-ACGGU-GUUCAUGC----GUG-----------GCAUGAAGCCGCGAAA--GCAGG-GAUGCGCAAU-ACCUGC-UUUCCGCCAU--UUGCGC",
"ACGCAA-ACGGU-GUUCAUGC----GUG-----------GCAUGAAGCCGCGAAA--GCAGG-GAUGCGCAAU-ACCUGC-UUUCCGCCAU--UUGCGC"
] | rfam_14_5_ref |
URS0001A24696_12908_1-115 | AGGCACCUUAGUAGCCGGUUUCUUGCGAAACCUGCGGGCGGGGGCCUUAAACAUAGCGGCGGGUAAACCUGCCGCCAGUCGGGGAAACCCGACUUAGCUAAACGGAAGACAGAAA | ((((.(((................................)))))))..........(.(((((......................))))).)...................... | [
"URS0001A24696_12908/1-115",
"URS0001A23F1D_12908/1-113",
"URS0001A243CE_351016/1-75"
] | [
"AGGC-ACCUU-AGUAGCCGGUUUCUUGCGAAACCUGCGGGC----GGGG----GCC-UUAAACAUAGC----GGCGG-----------GU--------------------------AAACCUGCCGCCAGUCGGGGAA---------------------------------------------------------AC-----------------------C-CGAC---U--U-AGCUAAACGGA-AGACAGA-AA",
"GGGC-ACCUU-AGUAGCCGGUUUUGCACGAAAUCUGCGGAC----GGGG----... | rfam_14_5_ref |
URS0001A246A1_12908_1-69 | UAUAUUUGCCCCUCAAUUCUGAGAGCCAGAAUUGUUUGCAUAAAAAUUAUUUAAACAAAUAUUGGAAUG | .............((((((.........))))))................................... | [
"URS0001A246A1_12908/1-69",
"URS0001A2347C_12908/1-67",
"URS0001A237F3_12908/1-69",
"URS0001A2462B_12908/1-69",
"URS0001A23CAC_12908/1-69",
"URS0001A23F1F_12908/1-69",
"URS0001A23EE0_12908/1-69",
"URS0001A24A59_12908/1-68"
] | [
"UAUAU-UUGCCCCU-------------CAAUUCUG----------AGAGC----------------CAGAAUUG------------------------------------UUUGC-AUAAA-AAUUAUU---UAAAC--AAAUAUUGGAAUG",
"UAUAU-UUGCCACU-------------UGAUUGU-----------CUCAA-----------------AAAAUUG------------------------------------AUUAC-AUAAA-AAUUAUU---UAAAG--AAAUAUUGGAAUG",
... | rfam_14_5_ref |
URS0001A246A3_12908_1-92 | GGGGACCUUCGGGGCCCUAAAAGACCGAGCAAAACAAAUGCUCGAAACAUACUGGUCGGGGCAACCCGAUCUUGCUUAACGGAAGACAGAAA | ((((.(((...))))))).......((.(.........(((...................))).).))........................ | [
"URS0001A246A3_12908/1-92",
"URS0001A23BD1_12908/1-91",
"URS0001A24B04_12908/1-91"
] | [
"GGGG-ACCU--UCG--------------------------------GGG----CCC-UAAAAGAC-------CGAGCAAAACAAA---UGCUCGAAACA-----------------UAC-------------------------------------------------------------------UGGUCGGGGCA-----------------------A-CCCGA--UC-U-UGCUUAACGGA-AGACAGA-AA",
"GGGG-ACCU--UCG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A246A5_12908_1-58 | GAAAGGUCGUUCUUUCGCCAAAGACGACUGGGUGUUUUACCGAGGCACCCCAAUUAGG | ....(((((((...........)))))))((((((((.....))))))))........ | [
"URS0001A246A5_12908/1-58",
"URS0001A238E0_12908/1-57",
"URS0001A24B09_12908/1-57"
] | [
"GAAAGGUCGUUCUUUCGCC--------------------------------------------------AAAGA-CGACUGGGUGUUUU-------------------------------ACC--------------------------------------------------------------------------------------------------------GAGGCACCCCAA----UUAGG",
"GAAAGGUUGC----UUUACGCCAAAA-----------------------------------... | rfam_14_5_ref |
URS0001A246B6_12908_1-28 | UAACCACUGGCGAUAUACGUGUAUGUUG | ((((...(.(((.....)))..).)))) | [
"URS0001A246B6_12908/1-28",
"URS0001A23539_12908/1-28",
"URS0001A244FA_12908/1-28",
"URS0001A23D6B_12908/1-28",
"URS0001A249A6_12908/1-28"
] | [
"UAACCACUGGCG--AUAUA-------CGUGUAUGUUG",
"CAACCGCUGACG--AAAAA-------CGUGUAUGUUG",
"UAACCUCUGGCG--AAGGA-------CGUGUAUGUUA",
"UAACCACUGGCG--AUAAC-------CGUGUAUGUUG",
"UAACCACUGGCG--AGAUA-------CGUGAAUGUUG"
] | rfam_14_5_ref |
URS0001A246BA_12908_1-83 | CCUGCCUGUGCAGGUCGGGAUGUGGCUGGCGGGGUCUCUGACCCCGGGCAGGCGGCACCGCCGCCGGAGAGCUGAACCACACA | (((((....)))))..((.....((((..........................................))))...))..... | [
"URS0001A246BA_12908/1-83",
"URS0001A23CAA_12908/1-77"
] | [
"CCUGC------------------------------CUGU------------------------------------GCAG-G------UCGGGAUGU-GGCU--------------------------------------------------------------GG-CGGGGUC---------UCU--------------------GACCCCG-GGCA------------------GGCGG---------------------CACCG-----------------------CCGCCGGAG-----------------... | rfam_14_5_ref |
URS0001A246C0_12908_1-68 | UAUCUUUGCAGCCGUAUUGACCAAGGUGGUUAGUCUACAUAAUAAUCAUUUACACAAAUAUUAGCAUG | ...............(((((.........))))).................................. | [
"URS0001A246C0_12908/1-68",
"URS0001A24435_12908/1-66",
"URS0001A243DC_12908/1-66",
"URS0001A247CA_12908/1-68",
"URS0001A23EA2_12908/1-68",
"URS0001A24255_12908/1-56"
] | [
"UAUCU-UUGCAGCCG------------UAUUGACCA---------AGG-----------------UGGUUAGUC--------------------------------------UAC-AUAAU-AAUCAUU---UACAC--AAAUAUUAGCAUG",
"UAUCU-UCGCACCGU------------AAUUCCAA----------GAG------------------UUGGAGUU-------------------------------------CUAC-AUAAU-AAUCAUU---CA-AG--UAAUAUUGGCAUG",
... | rfam_14_5_ref |
URS0001A246D1_12908_1-48 | CCCGAUCUGUUCGGGAUGACAUGUGGCGCAGAUGCGCUGAAUCGCAAC | (((((.....)))))..((.....(((((....)))))...))..... | [
"URS0001A246D1_12908/1-48",
"URS0001A23886_12908/1-48",
"URS0001A24014_12908/1-48",
"URS0001A238C8_12908/1-48",
"URS0001A23A92_12908/1-48"
] | [
"CCCGA------------------------------UCUGU-----------------------------------UCGG-G------AUGACAUGU-GGCGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAU-----------------... | rfam_14_5_ref |
URS0001A246DE_12908_1-72 | ACGGUUCCGGUUGACGGCGCGAUCGGCAGCACGCCCGCGCCCGUCUUGAGGAGCACCGCCGACCCGGCGACC | ..(((.((((....(((((.....................................)))))..))))..))) | [
"URS0001A246DE_12908/1-72",
"URS0001A234C8_927661/1-50"
] | [
"ACGG-UUCCGGUUGACGGCG----------------------------CGAUCGGCAGCACGCCCGCGCCCGUCUUGAGGAGCAC---------------------------------------CGCCGACCCGGCG-ACC",
"UCGG-UUCCGGUUCACGCUGCGCUCC----------------------GCCU------------------------------------------------------------------GGAG-GCCGCGACCCGGCG-ACC"
] | rfam_14_5_ref |
URS0001A246FD_12908_1-76 | GGGGGAAGUCUUACGCCCCCCGCCGGGCAAAGUGUUAAUAGCGCCGCUUGUGGCCGAGCGUCGCGGUUAGUGAAUC | (((((..........)))))..............(((((.(((.(((((......))))).))).)))))...... | [
"URS0001A246FD_12908/1-76",
"URS0001A24545_12908/1-75"
] | [
"GGGGG------AAGUCUUACG---------CCCCC--CGCCGGGCAAAGUGUUAAUAGCG--CC--GCUUG----------UGGC-CGAGCG-UCGCGGUUAGUG-AAUC",
"GGGGG------AAGUCUUAG----------CCCCC--CGCCGGGCAAAGUGUUAAUAGCG--CC--GCUUG----------UGGC-CGAGCG-UCGCGGUUAGUG-AAUC"
] | rfam_14_5_ref |
URS0001A24712_12908_1-36 | GCCUUGGUCGGAAACCAAGGCACUCUGUCAAAGGAG | ((((((((.....))))))))............... | [
"URS0001A24712_12908/1-36",
"URS0001A239F1_12908/1-33",
"URS0001A24083_12908/1-34",
"URS0001A2481B_12908/1-33",
"URS0001A23893_1531429/1-33",
"URS0001A2377A_12908/1-30",
"URS0001A241EF_1235794/1-31",
"URS0001A237EB_1121866/1-31",
"URS0001A23C4B_12908/1-33",
"URS0001A247D3_502558/1-33"
] | [
"GC-CUUGGUCGGAAACC-AAGGC--ACUCUGUCAAAGGAG",
"GG-CUUGGUCGGAAACC-AAGCC-----UCGAUAAAGGAG",
"GC-CUUGAUCGGAAACC-AAGGC----ACAGAAGAAGGAG",
"GCACUUGGUCGGAAACC-AAGGC------ACUAGAAGGAG",
"GA-CUUGGUCGGAAACC-AAGUC-----CUCGAAAAGGAG",
"CC-CUUGGUCGGAAACC-AAGGA--------AGUUAGGAG",
"UC-CUUGGUCGGAAACC-AAGGG-------AAGAUAGGA... | rfam_14_5_ref |
URS0001A24713_12908_1-62 | CGUGUGGUGCCGGUGCAGGUGAAUUCCUGGCACGGGAGAGCGACGCGGCCCUUUACUGAGGU | (((((.((..(.((((.............)))).)....)).)))))............... | [
"URS0001A24713_12908/1-62",
"URS0001A2477B_592316/1-58",
"URS0001A23C3E_1681195/1-58",
"URS0001A242E5_1144341/1-58",
"URS0001A237CE_12908/1-59",
"URS0001A2485A_660596/1-59",
"URS0001A239EC_1522060/1-59",
"URS0001A2428F_470934/1-59",
"URS0001A24015_12908/1-59",
"URS0001A24015_470931/1-59"
] | [
"CGUGUGGUGCCGGUGC------AGG----------UGAAUU----------------------CCUG---G-CACGGGAGAGCGACGCGGCCCUUUACU----GAGGU",
"CGUGUGGUG-CUGUGC------AGG----------UUUGG-----------------------CCUG---G-CACGG-AGAGCGACACGGCCUUUUAU-----GAGGU",
"CGUGUGGUG-CUGUGC------AGGC---------UGA------------------------GCCUG---G-CACGG-AGAGCGACA... | rfam_14_5_ref |
URS0001A24714_12908_1-88 | AGCACUCUUGGAUAGUGCUGGCAGAUGUAAGUCCGACGUGCGGCAACGCACGGGCCGGAGGGGGUUCUCCCCCGGCCUCUGGGAUUAC | ((((((.......)))))).......((((..((...(((((....)))))(((((.................)))))...)).)))) | [
"URS0001A24714_12908/1-88",
"URS0001A24579_12908/1-84",
"URS0001A23BF9_12908/1-84"
] | [
"AGCACU-------CUUGGAU--------------AGUGCU---GGCAGAUGUAAGUCCGA--CGUGCGGCAA-----------------------------------------------CGCAC-GGGCCGGAGGGGGUUC--------UCCC-CCGGCCUC-UGGGAUUAC",
"AGCACU-------UCUGGAU--------------AGUGCU---GGCAGAUGUAAGUCCGA--CGUGCGGCAA-----------------------------------------------CGCAC-GGGCCGGGG---... | rfam_14_5_ref |
URS0001A24716_1519438_1-101 | GAAAGGGCGUGAAUACCGACACGCCUGGGCUGGGAUAUCGGAACAUUACUGCGUUCCGGUAGGGAACAGGAAAAAAUCCAGUGCCCGCAGCCUCAAUUUAG | ....(((((((........)))))))(((((((....................................................).))))))........ | [
"URS0001A24716_1519438/1-101",
"URS0001A23C4A_12908/1-90"
] | [
"GAAAGGGCGUG---AAUACCGA--------------------------------------------------CA-CGCCUGGGCUG-GG--------AUAUCGGA-------AC------AUUACUGC-------------------------------------------------------------------GUUCCGGUAGGGAACAGGAAAAAAUCCAGUGCCCGCAGCCUCAA----UUUAG",
"GAAAGGGCGUGUU-AUA--------------------------------------------... | rfam_14_5_ref |
URS0001A24718_12908_1-76 | AGGGUGUGGUGUAACACACUCUAAAUCUGCGUGUUAAUAGCUUUUCUCAUUGGCCUGGGAGAGCGGUUAGUGAAUC | ((((((..........))))))...........(((((.(((.((((((......))))))))).)))))...... | [
"URS0001A24718_12908/1-76",
"URS0001A233AB_12908/1-70"
] | [
"AGGGUGUG---GUGUAA----------CACACUCU-----AAAUCUGCGUGUUAAUAGCUU-UU--CUCA----------UUGGCC-UGGGA-GAGCGGUUAGUG-AAUC",
"AAGACU-----GUAAG-------------AGUCUU----AAAAUCUGUGUGUUAAUAGCA--UU--UUCA----------UUGGCC-UGGA--AUGCGGUUAGUG-AAUC"
] | rfam_14_5_ref |
URS0001A24737_12908_1-75 | UCAAUGCGAUGAUGCAGGAGAUUGCGUCCUGGACGGUAACUUCUGCGGAGUAUGUCCGGUCAUCGGGCGGCUGGG | .............(((.(((....(((((.))))).....))))))........(((((((.......))))))) | [
"URS0001A24737_12908/1-75",
"URS0001A23817_12908/1-70",
"URS0001A242B6_12908/1-68"
] | [
"UCAAUGCGAUGAUGCAGG-AGAUUGCGUCCU---------------------------------------------------------------------GGACG-GUAAC-UUC-UGCGGAGUAUGUCCG-------G--UC--AUCGGGC--------------GGC--------------UGGG-",
"-AAAUGCGAUGAACCGGG-AGAUUGCUCC--------------------------------------GAAA------------------------------GGAG-GUAAC-UUC-CGGGG... | rfam_14_5_ref |
URS0001A2474E_12908_1-39 | CUCCGACGAAGGAUAAGAAUAAGACCUUAAUUCUCGGAG | ((((((.(((((............))))....))))))) | [
"URS0001A2474E_12908/1-39",
"URS0001A23799_12908/1-39",
"URS0001A239F5_12908/1-39",
"URS0001A231D8_12908/1-32"
] | [
"C-UC-C-GACGAAGGAUAAGAAUAAGA----CCUUAAU-UC-U-CGGA--G",
"C-UU-C-GACGAAGGAUAAGAAUAAGA----CCUUAAU-UC-U-AGGA--G",
"C-AU-C-AGAGAAGGAUAAGAAUAAGA----CCUGAAU-UC-U-CAAU--G",
"G-UU-U-GACGAAGGAUAGA-----------CCUUAAU-UC-U-CAUA--C"
] | rfam_14_5_ref |
URS0001A24760_1535422_1-50 | CGCAUGGUAUCUGGCAAAAGAUCAGAUGGCGAUGCGGCCUAACACAAGGU | (((((.((..(((((....).))))...)).))))).............. | [
"URS0001A24760_1535422/1-50",
"URS0001A23728_137584/1-50",
"URS0001A23728_485447/1-50",
"URS0001A2471A_1517416/1-49"
] | [
"CGCAUGGUAUCUGG-C-------------------AAAA-------------------------------G-AUCAG-AUGGCGAUGCGGCCUAACAC-----AAGGU",
"CGUAUGGUACCUGG-C-------------------AAAA-------------------------------G-AUCAG-GUGGCGAUACGGCCUUAACA-----GAGGU",
"CGUAUGGUACCUGG-C-------------------AAAA-------------------------------G-AUCAG-GUGGCGAUA... | rfam_14_5_ref |
URS0001A24761_592678_1-62 | CCGGCACCGGUUCACCCCACUGGCUCACUUUGGGCCGAGCGUUGUUCGGGGACCCGGCGGCC | ..(((.((((....(((((.........................)..))))..))))..))) | [
"URS0001A24761_592678/1-62",
"URS0001A23ABE_1068978/1-52",
"URS0001A23ABE_385957/1-52",
"URS0001A23ABE_1068979/1-52",
"URS0001A23708_1337958/1-37",
"URS0001A23708_1463846/1-37",
"URS0001A24710_928729/1-54",
"URS0001A2475F_882084/1-55"
] | [
"CCGG-CACCGGUUCACCCC--A--------------------------CUGGCUCACUUUGGGCCGAGCGUUG-------------------------------------------------UUCGGGGACCCGGCG-GCC",
"CCGG-CUCCGGUUCACCCCACGUGUCG---------------------AAGAA----------------------------------------------------------------CGCCGCG--GGGACCCGGCG-GCC",
"CCGG-CUCCGGUUCACCCCAC... | rfam_14_5_ref |
URS0001A2476C_12908_1-55 | GAAAGGUCGGGUAUUUAUCCGGCUGGAUGUACCGAAUGUGUAUAUCCCAUUUAGG | ....((((((((....))))))))((((((((.......))))))))........ | [
"URS0001A2476C_12908/1-55",
"URS0001A2424E_12908/1-51"
] | [
"GAAAGGUCGGGU--AUUU-----------------------------------------------------AUC-CGGCUGGAUGUACC-------------------------------GAAUGU------------------------------------------------------------------------------------------------------GUAUAUCCCAU----UUAGG",
"GAAAGGUCGGGU--AUUU-------------------------------------------... | rfam_14_5_ref |
URS0001A2476E_12908_1-70 | GGAUCCACGAGCGGGAUGGAAACAUCCCAAACGAAACGGACCUUUGGUCCAAAGCAACGGAAGACAGAGA | (((((((.........)))....))))..........(((((...))))).................... | [
"URS0001A2476E_12908/1-70",
"URS0001A23D0F_1415159/1-62",
"URS0001A23D0F_272942/1-62"
] | [
"GGAU--CCA--CGAGCGGGA--------------------------UGGAAACAUC-CCAAACGAAAC----GGACCUUU--------------------------------------------------------------------------------------------------------------------------------------------G-GUCC------AAAGC--AACGGA-AGACAGA-GA",
"GGGG--AGC--UACG-------------------------------GCG----... | rfam_14_5_ref |
URS0001A24798_12908_1-66 | GACGGGAACGUACGGCCGCAACUCCGACGUGCCGCCCGCUUGGGCGGCUUGGGAUUGCGGCGGUGU | .........((((.(((((((..((.....(((((((....)))))))...)).))))))).)))) | [
"URS0001A24798_12908/1-66",
"URS0001A235FF_12908/1-63",
"URS0001A23D8B_12908/1-63",
"URS0001A24159_12908/1-63",
"URS0001A23E38_12908/1-66",
"URS0001A2411A_12908/1-66"
] | [
"GACGGGAACGUACGGCCGCAACUCCGACGU-GCCGCCC----------------------------------GCUU------------------------------------------------------GGGCGGC-U-U-GGGAUUGCGGCGGUGU",
"UCGGGAAACACACGGCCGCAACUCCGACGC-GUCGGC-----------------------------------GCU--------------------------------------------------------GCCGAC-U-U-GGGAUUGCG... | rfam_14_5_ref |
URS0001A247A9_911126_1-49 | CGAGACAAUGUCUCAUGGAUGUGGCUUUUUAAAAAAGCUGAACAAAAGG | .((((.....))))...(....(((((.......)))))...)...... | [
"URS0001A247A9_911126/1-49",
"URS0001A246EC_12908/1-42",
"URS0001A232CA_12908/1-41",
"URS0001A242DD_12908/1-43",
"URS0001A24AE9_868131/1-43",
"URS0001A245E1_12908/1-44",
"URS0001A247A9_483214/1-49",
"URS0001A247A9_12908/1-49",
"URS0001A247A9_911128/1-49",
"URS0001A247A9_911117/1-49"
] | [
"CGAGAC-----------------------------AAU------------------------------------GUCUC-A-------UGG-AUGU-GGCUUUU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAA------------------... | rfam_14_5_ref |
URS0001A247AD_1120936_1-59 | CCCGGGGCCGGUCGGCCCCGGGGUUCGGCUGACGCCGGUACCUGACACGGCCGGCGCAG | (((((((((....)))))))))......(((.(((((((..........)))))))))) | [
"URS0001A247AD_1120936/1-59",
"URS0001A24A95_12908/1-52",
"URS0001A23F66_561175/1-58",
"URS0001A23388_1463854/1-47"
] | [
"CCCGGGGCC-------GGUC--------------------------GGCCCCGGGGUUCGG-CUGA-CGCCGGUACCUGACACGGCCGGCG--CAG",
"GGGGCUAC--------GAGUG--------------------------GUGGCCCC-------CUGA-CGCCGGUACCUGACACGGCCGGUG--CAG",
"CCCGGGGCC-------GCCC--------------------------GGCCCCGGGGCAAG--CUGA-CGUCGGUACCUGAUACGGCCGGCG--CAG",
"CCUGG----... | rfam_14_5_ref |
URS0001A247B5_12908_1-61 | CGUAUGGUGCUUAGCAAUUAAUAGGAAUUGACUAAGUGGCGAUACGGCCUAAUACAGAGGU | (((((.((..(((((..............).))))...)).)))))............... | [
"URS0001A247B5_12908/1-61",
"URS0001A248F2_12908/1-61",
"URS0001A23676_12908/1-59",
"URS0001A23FAE_12908/1-59",
"URS0001A24275_12908/1-59"
] | [
"CGUAUGGUGCUUAG-C------AAUU---------AAUAGG---------------------AAUU----G-ACUAA-GUGGCGAUACGGCCUAAUACA----GAGGU",
"CGUAUGGUGCUUUG-C------AGC----------AAUAAAUA--------------------GCU----G-ACUAA-GUGGCGAUGCGGCCUUAAACA----GAGGU",
"CGUAUGGUGCUUGG-C------AG-----------CAAUAAUGA--------------------CU----G-AUCAA-GUGGCGAUG... | rfam_14_5_ref |
URS0001A247EB_12908_1-68 | GGGGCAAAAACAGCCCCAAAGUGCGUGUGAAUAGUGUGCUUAUUGGCCAGGUACACGGUUCGUGAAUC | (((((.......)))))..........(((((.((((((((.......)))))))).)))))...... | [
"URS0001A247EB_12908/1-68",
"URS0001A2363E_12908/1-68"
] | [
"GGGGC------AAAAACA------------GCCCC------AAAGUGCGUGUGAAUAGUG--U---GCUU---------AUUGGCC-AGGU--ACACGGUUCGUG-AAUC",
"GGGGC------GAAUUAU------------GCCCC------AAAGUGCGUGUGAAUAGUU--CG--CUCU----------UUGGCC-AGA-C-GGACGGUUCGUG-AAUC"
] | rfam_14_5_ref |
URS0001A247EF_443143_1-63 | GUCCGAGAACCGUGAGGAAACGUCUCCCCUUGCGGAUCCGGCUAAUUUAAAAACCAGAAGGAG | ..(((.((.((((((((..........)))))))).)))))...................... | [
"URS0001A247EF_443143/1-63",
"URS0001A2374C_12908/1-61",
"URS0001A236FF_12908/1-57",
"URS0001A2417D_12908/1-57",
"URS0001A243A1_12908/1-55",
"URS0001A2334E_12908/1-58",
"URS0001A23BD6_12908/1-55",
"URS0001A236BC_12908/1-56",
"URS0001A24835_12908/1-56",
"URS0001A23D05_12908/1-60"
] | [
"GUCCGAGAACCGUGAGG-----AAACGUCUCCCCUUGCGGAUCCGGCUAAUUUAAAAACCAGA----------------------------------------------------------AGGAG",
"AGCUGUGAACCGCGAGG-----AAACGUCUCCCCUUGCGGAUCCGGACCAAUAAAAACC------------------------------------------------------------AAAGGAG",
"GCCCCAGAGCCGCGAGG-----AAACGG--CCUCUUGCGGAUCGGGUAAUU... | rfam_14_5_ref |
URS0001A247F6_12908_1-32 | GAUUGUAAUUUCUUCUCUACAGUUCGCGGCUG | ((((((............))))).)....... | [
"URS0001A247F6_12908/1-32",
"URS0001A243F8_12908/1-31"
] | [
"G-AUUGUA---------------------------------AUUUCUUCUC--UACAGUUCGCGG-CU-G",
"GAUUGUA----------------------------------AUUUCUUCUC---UACAGUCGCGG-CU-G"
] | rfam_14_5_ref |
URS0001A2480F_12908_1-141 | GAAAGGGUAUGUAGUUUCCGUACAUACCUGGGCUGGGAUAUCGGAAGGAUACAUUCCGGUAGGAUGCAGCAGUAAAUGAGUUACACCAGACUUCAUUUAUAAAAAGAAGAGACUCAUUUCGCAUUCGCAGCCUCAAUUAGG | ....((((((((.........))))))))((((((.(........................................................................................).))))))........ | [
"URS0001A2480F_12908/1-141",
"URS0001A2486F_12908/1-141",
"URS0001A2339E_12908/1-141"
] | [
"GAAAGGGUAUGUA-GUUUCC-------------------------------------------------GUACA-UACCUGGGCUGGGA--------UAUCG----------GAAG----GAUACAUUCCGGUAGGAUGCAGCAGUAAAUGAGUUACACCAGACUUCAUUUAUAAAAAGAAGAGACUCA----UUUC---GCAU-----------------------UCGCAGCCUCAA----UUAGG",
"GAAAGGGUAUGUA-GUUUCCG----------------------------------------... | rfam_14_5_ref |
URS0001A2481C_12908_1-32 | CUAUGGUCUGAGAAAUGGCUAUGGCAAAGGAG | ((((((((........))))))))........ | [
"URS0001A2481C_12908/1-32",
"URS0001A2481C_879301/1-32",
"URS0001A2481C_879297/1-32"
] | [
"CUAUG-------GUC----------UGAGAAAU---------------GGC-------UAUGG-C---AAAGGAG",
"CUAUG-------GUC----------UGAGAAAU---------------GGC-------UAUGG-C---AAAGGAG",
"CUAUG-------GUC----------UGAGAAAU---------------GGC-------UAUGG-C---AAAGGAG"
] | rfam_14_5_ref |
URS0001A24829_12908_1-77 | GGGGAUGAACUUAGAGUCCCCAACGUAUGGGAGUGUUAAUAGUCGCACUUUUGGCCAGGUUCGACGGUUAGUGAAUC | ((((((.........))))))..............(((((.((((.((((......)))).)))).)))))...... | [
"URS0001A24829_12908/1-77",
"URS0001A23F76_12908/1-76",
"URS0001A2373F_915438/1-75",
"URS0001A23AD0_12908/1-75",
"URS0001A23766_12908/1-75",
"URS0001A238BD_12908/1-76",
"URS0001A2377F_873533/1-75",
"URS0001A23512_12908/1-75",
"URS0001A23512_1073367/1-75",
"URS0001A23468_12908/1-75"
] | [
"GGGGAU-----GAACUUAGA---------GUCCCC--AACGUAUGGGAGUGUUAAUAGUC--GC--ACUU----------UUGGCC-AGGUU-CGACGGUUAGUG-AAUC",
"GGGGAU-----ACACUUAGA---------GUCCCC---UGGGUAUGGUGUGUUAAUAGCA--CA--UCCU----------GUGGCC-GGGAU-UUGCGGUUAGUG-AAUC",
"GGGGAU-----AAACUUAGA---------AUCCCU----AUGAAUAUUGUGUUAAUAGUC--GU--ACUU----------UUG... | rfam_14_5_ref |
URS0001A24833_12908_1-72 | GGCCACCUUUCGGGGGGGCUUUUACCAUAGGCAAAGCGUUGCUUUGCCGCAUAAGCAAACGGAAGACACAAA | ((((.(((.....))))))).........((((((((...))))))))........................ | [
"URS0001A24833_12908/1-72",
"URS0001A24B2C_12908/1-69",
"URS0001A24263_12908/1-62",
"URS0001A23A47_12908/1-64",
"URS0001A249EF_12908/1-69",
"URS0001A23934_12908/1-69",
"URS0001A2320D_12908/1-69",
"URS0001A234C0_12908/1-69",
"URS0001A24589_12908/1-69",
"URS0001A2354F_12908/1-69"
] | [
"GGCC-ACCUU-UCG-------------------------------GGGG----GGC-UUUUACCAUA-----GGCAA-----------AGC-------------------------GUU---------------------------------------------------------------------------GCU-----------------------U-UGCCG--CA-UAAGC-AAACGGA-AGACACA-AA",
"GGCC-ACCC--UCG--------------------------------GGG----... | rfam_14_5_ref |
URS0001A2483E_1111729_1-64 | ACUCAGGCACGGUCCCGUUGAGCAUGCUCGGUGGGGUAUCGACCUGAAGUUCAAUCCUGAGGGA | (((((((......(((..((((....))).)..)))......)))).))).............. | [
"URS0001A2483E_1111729/1-64",
"URS0001A23CEC_12908/1-64",
"URS0001A24938_12908/1-55"
] | [
"ACUCAGGCACGGUCCCGUU--------------GAG--------------------------------CAUG------------------------------------------------CUCG--------------------------GUGGGGUAUCGACCUGAAGU--UCAAUCCUGAGGGA",
"ACUCAGGCACGAUCGUCAG-------------------------------------------------AUCCGUUUUG---------------------------------------------... | rfam_14_5_ref |
URS0001A2484F_12908_1-94 | CUGACGACGGCGCAUGGGUGGAGAUAGGUGUUGAGCGCCCAUUGCCCCUCAGGACCGAAAAGCGGUUUCGGUUGGGGCAGCGCCUGAACGUCAG | (((((...(((((..((((...(.(.(....).).)))))..(((((.....((((((.........)))))).)))))))))).....))))) | [
"URS0001A2484F_12908/1-94",
"URS0001A23606_12908/1-94",
"URS0001A2329F_12908/1-94",
"URS0001A2329F_1110509/1-94",
"URS0001A24187_12908/1-94",
"URS0001A2498F_12908/1-94"
] | [
"CUGAC-GACGGCGCAU----GGGUGGAG---AUAG----GUGU---------UGAG-C-GCCCAU----UGCCCCUCAG-GACCGAAA-----------AGCGG-------------------UUUCGGUU-----------GG-GGCA------GCGCCUGAAC-----GUCAG",
"CUGAC-AACGGCGCAU----GGGUGGAG---AUAG----GUGU---------UGAG-C-GCCCAU----UGCCC------CUCAAGACCGC--------AUC------------------GCGGUACAGAG---... | rfam_14_5_ref |
URS0001A2485B_12908_1-63 | CUGUAAAGAUAUGUUGGCCGUAGGGCCAUCUCCGAGUUUUAGGAAGCGGAACAUAUCGAUGAA | .......((((((.(((((....)))))..((((............)))).))))))...... | [
"URS0001A2485B_12908/1-63",
"URS0001A241F9_12908/1-59",
"URS0001A2366A_12908/1-62"
] | [
"CUGUAAAGAUAUG-UU-G-GCCGUAG-GGC-CAUC--UCCG------------------AGUUUUAGGAAG----------CGGAACAU-AUC--GAUG--AA",
"CUGUAAAGAUAUG-UU-GAGCCGUAG-AGC-C-GCGACCUUU-----------------UACA-----------------AAAGGACAU-AUC--GAUG--AA",
"CUGUAAAGAUAUG-UU-G-GCUGUAG-AGC-CAUC--UCCG------------------AAUUUAGGAAA-----------CGGAACAU-AUC--GA... | rfam_14_5_ref |
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