repo_name string | path string | copies string | size string | content string | license string |
|---|---|---|---|---|---|
guziy/basemap | lib/mpl_toolkits/basemap/cm.py | 2 | 40170 | from __future__ import (absolute_import, division, print_function)
"""
extra colormaps:
* Generic Mapping Tools colormaps: GMT_drywet,GMT_gebco,GMT_globe,GMT_haxby
GMT_no_green,GMT_ocean,GMT_polar,GMT_red2green,GMT_relief,GMT_split,
GMT_wysiwyg
* Stepped-sequential scheme: StepSeq
* A nonlinear precipitation colormap... | gpl-2.0 |
frownless/EMUstack | backend/plotting.py | 1 | 42894 | """
plotting.py is a subroutine of EMUstack that contains numerous plotting
routines. These were developed during simulations for photovoltaics,
hence the efficiency calculations.
Copyright (C) 2013 Bjorn Sturmberg, Kokou Dossou, Felix Lawrence
EMUstack is free software: you can redistribu... | gpl-3.0 |
detrout/debian-statsmodels | statsmodels/base/tests/test_data.py | 1 | 35156 | import numpy as np
from numpy.testing import assert_equal, assert_, assert_raises
import pandas
import pandas.util.testing as ptesting
from statsmodels.base import data as sm_data
from statsmodels.formula import handle_formula_data
#class TestDates(object):
# @classmethod
# def setupClass(cls):
# nrows =... | bsd-3-clause |
huzq/scikit-learn | sklearn/model_selection/tests/test_split.py | 1 | 61594 | """Test the split module"""
import warnings
import pytest
import numpy as np
from scipy.sparse import coo_matrix, csc_matrix, csr_matrix
from scipy import stats
from scipy.special import comb
from itertools import combinations
from itertools import combinations_with_replacement
from itertools import permutations
from ... | bsd-3-clause |
m3wolf/xanespy | tests/test_qt.py | 1 | 40620 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
#
# Copyright © 2016 Mark Wolf
#
# This file is part of Xanespy.
#
# Xanespy is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# ... | gpl-3.0 |
hypergravity/hrs | twodspec/extern/polynomial.py | 1 | 65808 | # -*- coding: utf-8 -*-
"""
Extended functions to operate on polynomials
"""
# ------------------------------------------------------------------------
# Name: polynomial
# Purpose: Functions to operate on polynomials.
#
# Author: pab
# polyXXX functions are based on functions found in the matlab to... | bsd-3-clause |
ARudiuk/mne-python | mne/cov.py | 1 | 75049 | # Authors: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr>
# Matti Hamalainen <msh@nmr.mgh.harvard.edu>
# Denis A. Engemann <denis.engemann@gmail.com>
#
# License: BSD (3-clause)
import copy as cp
from distutils.version import LooseVersion
import itertools as itt
from math import log
imp... | bsd-3-clause |
DailyActie/Surrogate-Model | 01-codes/deap-master/deap/gp.py | 1 | 46680 | # This file is part of DEAP.
#
# DEAP is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License as
# published by the Free Software Foundation, either version 3 of
# the License, or (at your option) any later version.
#
# DEAP is distributed ... | mit |
maropu/spark | python/pyspark/pandas/frame.py | 1 | 427279 | #
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not us... | apache-2.0 |
gfyoung/pandas | pandas/tests/frame/test_arithmetic.py | 1 | 59793 | from collections import deque
from datetime import datetime
import operator
import re
import numpy as np
import pytest
import pytz
import pandas as pd
from pandas import DataFrame, MultiIndex, Series
import pandas._testing as tm
import pandas.core.common as com
from pandas.core.computation.expressions import _MIN_ELE... | bsd-3-clause |
mne-tools/mne-python | mne/preprocessing/maxwell.py | 1 | 103928 | # -*- coding: utf-8 -*-
# Authors: Mark Wronkiewicz <wronk.mark@gmail.com>
# Eric Larson <larson.eric.d@gmail.com>
# Jussi Nurminen <jnu@iki.fi>
# License: BSD (3-clause)
from collections import Counter, OrderedDict
from functools import partial
from math import factorial
from os import path as op
... | bsd-3-clause |
jakevdp/seaborn | seaborn/categorical.py | 1 | 102456 | from __future__ import division
from textwrap import dedent
import colorsys
import numpy as np
from scipy import stats
import pandas as pd
from pandas.core.series import remove_na
import matplotlib as mpl
import matplotlib.pyplot as plt
import warnings
from .external.six import string_types
from .external.six.moves im... | bsd-3-clause |
hetland/xray | xray/core/dataset.py | 1 | 74283 | import functools
import warnings
from collections import Mapping
from numbers import Number
import numpy as np
import pandas as pd
from . import ops
from . import utils
from . import common
from . import groupby
from . import indexing
from . import alignment
from . import formatting
from .. import conventions
from .a... | apache-2.0 |
kdaily/altanalyze | GO_Elite.py | 1 | 158023 | ###GO-Elite
#Copyright 2005-2008 J. David Gladstone Institutes, San Francisco California
#Author Nathan Salomonis - nsalomonis@gmail.com
#Permission is hereby granted, free of charge, to any person obtaining a copy
#of this software and associated documentation files (the "Software"), to deal
#in the Software ... | apache-2.0 |
L3nzian/AutoPermit | TmdlGui.py | 1 | 198879 | import wx
from wx import aui,grid
from wx.lib import colourdb
import wxmpl_plus
import matplotlib.dates
import _winreg
import TmdlFrame
if wx.Platform == '__WXMSW__':
import wx.lib.iewin as iewin
import TmdlLogic
import datetime
from dateutil import parser as DateParse, relativedelta as Relative
import types
from c... | gpl-2.0 |
rajul/mne-python | mne/epochs.py | 1 | 98236 | """Tools for working with epoched data"""
# Authors: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr>
# Matti Hamalainen <msh@nmr.mgh.harvard.edu>
# Daniel Strohmeier <daniel.strohmeier@tu-ilmenau.de>
# Denis Engemann <denis.engemann@gmail.com>
# Mainak Jas <mainak@neuro... | bsd-3-clause |
msincenselee/vnpy | vnpy/app/cta_strategy/backtesting.py | 1 | 39812 | from collections import defaultdict
from datetime import date, datetime, timedelta
from typing import Callable
from itertools import product
from functools import lru_cache
from time import time
import multiprocessing
import random
import traceback
import numpy as np
import matplotlib.pyplot as plt
import seaborn as s... | mit |
canismarko/xanespy | xanespy/xanes_frameset.py | 1 | 83425 | # -*- coding: utf-8 -*-
#
# Copyright © 2016 Mark Wolf
#
# This file is part of Xanespy.
#
# Xanespy is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any l... | gpl-3.0 |
PythonProgramming/PythonProgramming.net-Website | content_management.py | 1 | 41914 | ##
##//
##
##
##// CURRENT:
##// list of topics by {TOPIC:[["TITLE", "URL"]]}
##
##// FUTURE:
##////list of topics by {TOPIC:[["TITLE", "URL", "TAGS"],
##//// ["TITLE", "URL", "TAGS"]]}
def Content():
## // Suggest Branches for next steps
## // If liked: Matp... | mit |
biorack/metatlas | metatlas/tools/fastanalysis.py | 1 | 44715 | from __future__ import absolute_import
from __future__ import print_function
import logging
import os
import multiprocessing as mp
import pprint
from six.moves import range
import numpy as np
import pandas as pd
from metatlas.io import metatlas_get_data_helper_fun as ma_data
from metatlas.io import write_utils
from m... | bsd-3-clause |
dssg/education-college-public | code/etl/cleaners/clean_noble.py | 1 | 31155 | ''' Contains all the functions to clean Noble data.
Inputs:
Each cleaning function takes a dataframe (or many dataframes) as inputs.
These input dataframes are "raw", loaded directly from CSVs provided by partners.
Output:
Each cleaning function returns a "cleaned" dataframe, which is in the correct
format to be uplo... | mit |
ahaberlie/MetPy | src/metpy/plots/skewt.py | 1 | 36390 | # Copyright (c) 2014,2015,2016,2017,2019 MetPy Developers.
# Distributed under the terms of the BSD 3-Clause License.
# SPDX-License-Identifier: BSD-3-Clause
"""Make Skew-T Log-P based plots.
Contain tools for making Skew-T Log-P plots, including the base plotting class,
`SkewT`, as well as a class for making a `Hodog... | bsd-3-clause |
louispotok/pandas | pandas/tests/groupby/test_categorical.py | 1 | 31976 | # -*- coding: utf-8 -*-
from __future__ import print_function
from datetime import datetime
import pytest
import numpy as np
import pandas as pd
from pandas import (Index, MultiIndex, CategoricalIndex,
DataFrame, Categorical, Series, qcut)
from pandas.util.testing import assert_frame_equal, assert... | bsd-3-clause |
agiovann/Constrained_NMF | caiman/source_extraction/cnmf/estimates.py | 1 | 75132 | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Thu Jul 12 11:11:45 2018
@author: epnevmatikakis
"""
import logging
import matplotlib.pyplot as plt
import numpy as np
import scipy.sparse
from typing import List
import time
import caiman
from .utilities import detrend_df_f, decimation_matrix
from .spati... | gpl-2.0 |
aclapes/simpledarwintree | spectral_division.py | 1 | 37991 | """Tree structure and hierarchical divisive algorithm for spectral clustering
Used in the paper:
@article{Gaidon2014,
author = {Gaidon, Adrien and Harchaoui, Zaid and Schmid, Cordelia},
title = {{Activity representation with motion hierarchies}},
journal = {IJCV},
year = {2014}
}
LICENSE: BSD
Copyrights: Adrien Gaidon,... | gpl-2.0 |
dusenberrymw/deep-histopath | deephistopath/wsi/slide.py | 1 | 32987 | # ------------------------------------------------------------------------
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless requi... | apache-2.0 |
jreback/pandas | pandas/tests/groupby/aggregate/test_aggregate.py | 1 | 38917 | """
test .agg behavior / note that .apply is tested generally in test_groupby.py
"""
import datetime
import functools
from functools import partial
import numpy as np
import pytest
from pandas.errors import PerformanceWarning
from pandas.core.dtypes.common import is_integer_dtype
import pandas as pd
from pandas imp... | bsd-3-clause |
peterwilliams97/prince | explore.py | 1 | 30458 | # -*- coding: utf-8 -*-
"""
"""
from __future__ import division, print_function
import sys
import os
import re
import numpy as np
import pandas as pd
from pandas import DataFrame, Series
from glob import glob
from pprint import pprint
from sklearn import cross_validation, utils
from sklearn.ensemble impo... | mit |
tienhv/caravel | caravel/forms.py | 1 | 43489 | """Contains the logic to create cohesive forms on the explore view"""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
from collections import OrderedDict
from copy import copy
import json
import math
from flask_babel ... | apache-2.0 |
louispotok/pandas | pandas/tests/io/parser/common.py | 1 | 54118 | # -*- coding: utf-8 -*-
import csv
import os
import platform
import codecs
import re
import sys
from datetime import datetime
from collections import OrderedDict
import pytest
import numpy as np
from pandas._libs.tslib import Timestamp
import pandas as pd
import pandas.util.testing as tm
from pandas import DataFram... | bsd-3-clause |
plotly/plotly.py | packages/python/plotly/plotly/graph_objs/parcats/line/_colorbar.py | 1 | 73397 | from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class ColorBar(_BaseTraceHierarchyType):
# class properties
# --------------------
_parent_path_str = "parcats.line"
_path_str = "parcats.line.colorbar"
_valid_props = {
"bgcolor",
... | mit |
WMD-group/rvo | rvo_stats.py | 3 | 36130 | #! /usr/bin/env python
# rvo_stats.py
# Copyright 2015 Adam J. Jackson and Jonathan M. Skelton
from __future__ import print_function
import csv
import math
import numpy as np
from collections import namedtuple
import matplotlib as mpl
import matplotlib.pyplot as plt
# from matplotlib.ticker import FuncFormatter
im... | gpl-3.0 |
adykstra/mne-python | mne/decoding/csp.py | 1 | 36717 | # -*- coding: utf-8 -*-
# Authors: Romain Trachel <trachelr@gmail.com>
# Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr>
# Alexandre Barachant <alexandre.barachant@gmail.com>
# Clemens Brunner <clemens.brunner@gmail.com>
# Jean-Remi King <jeanremi.king@gmail.com>
#
# Lic... | bsd-3-clause |
jskDr/jamespy_py3 | jchem.py | 1 | 57361 | from rdkit import Chem
from rdkit.Chem import AllChem
from rdkit.Chem import Draw
from rdkit import DataStructs
from rdkit.Chem import MACCSkeys
from rdkit.Chem import FragmentCatalog
import matplotlib.pyplot as plt
import numpy as np
import pandas as pd
import os
from scipy import stats
# This is James Sungjin Kim's... | mit |
lvphj/epydemiology | epydemiology/phjCalculateProportions.py | 1 | 69661 | import pkg_resources
try:
pkg_resources.get_distribution('numpy')
except pkg_resources.DistributionNotFound:
numpyPresent = False
print("Error: Numpy package not available.")
else:
numpyPresent = True
import numpy as np
try:
pkg_resources.get_distribution('pandas')
except pkg_resources.Distri... | mit |
OGGM/oggm | oggm/workflow.py | 1 | 41901 | """Wrappers for the single tasks, multi processor handling."""
# Built ins
import logging
import os
import shutil
from collections.abc import Sequence
# External libs
import multiprocessing
import numpy as np
import pandas as pd
from scipy import optimize as optimization
# Locals
import oggm
from oggm import cfg, task... | bsd-3-clause |
agile-geoscience/welly | welly/well.py | 1 | 45351 | """
Defines wells.
:copyright: 2021 Agile Scientific
:license: Apache 2.0
"""
from __future__ import division
import re
import datetime
import warnings
import matplotlib.pyplot as plt
import matplotlib as mpl
import matplotlib.ticker as ticker
import lasio
import numpy as np
from io import StringIO
import urllib
fr... | apache-2.0 |
ChinaQuants/pyfolio | pyfolio/timeseries.py | 1 | 33526 | #
# Copyright 2015 Quantopian, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in wr... | apache-2.0 |
armsd/aRMSD | armsd/alog.py | 1 | 77989 | """
aRMSD log functions
(c) 2017 by Arne Wagner
"""
# Authors: Arne Wagner
# License: MIT
from __future__ import absolute_import, division, print_function
from builtins import range, input
try:
import numpy as np
except ImportError:
pass
class Logger(object):
""" An object used ... | mit |
Frikster/Mesoscale-Brain-Explorer | src/plugins/correlation_matrix.py | 1 | 38149 | #!/usr/bin/env python3
from __future__ import print_function
import os
import sys
import math
from PyQt4.QtCore import *
from PyQt4.QtGui import *
from .util import custom_qt_items as cqt
from .util import file_io
from .util.mygraphicsview import MyGraphicsView
sys.path.append('..')
import qtutil
import pickle
impor... | mit |
jdavidrcamacho/Tests_GP | 07 - MCMC results/kernel_multiqp_all.py | 1 | 40712 | # -*- coding: utf-8 -*-
import Gedi as gedi
import numpy as np; #np.random.seed(13042017)
import matplotlib.pylab as pl; pl.close("all")
from matplotlib.ticker import MaxNLocator
import astropy.table as Table
from time import time
import sys
#sys.path.append(...\Emcee)
import emcee
print
print 'It has began.'
print
#... | mit |
SiLab-Bonn/Scarce | scarce/fields.py | 1 | 42599 | r"""The field module calculates the potentials and fields of silicon sensors.
The potential is determined numerically by solving these equations on a mesh:
.. math:: \nabla^2 \Phi = 0
:label: laplace
.. math:: \nabla^2 \Phi = \frac{\rho}{\epsilon}
:label: poisson
For the weighting potential equation :eq:`lapl... | mit |
dattalab/d_code | imaging/segmentation/CellPicker.py | 1 | 47797 | import matplotlib as mpl
from PyQt4 import QtCore, QtGui
import sys
import matplotlib.pyplot as plt
from matplotlib.backends.backend_qt4agg import FigureCanvasQTAgg as FigureCanvas
from matplotlib.figure import Figure
mpl.rcParams['backend.qt4']='PySide'
import numpy as np
import scipy.ndimage as nd
import scipy
i... | mit |
sosey/ginga | ginga/cmap.py | 2 | 507657 | #
# cmap.py -- color maps for fits viewing
#
# Eric Jeschke (eric@naoj.org)
#
# Copyright (c) Eric R. Jeschke. All rights reserved.
# This is open-source software licensed under a BSD license.
# Please see the file LICENSE.txt for details.
#
from __future__ import print_function
import numpy
from ginga.util.six.move... | bsd-3-clause |
googlearchive/rgc-models | response_model/python/population_subunits/jitter/distributed/jitter_model.py | 1 | 31283 | # Copyright 2018 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, s... | apache-2.0 |
BRD-CD/superset | superset/views/core.py | 1 | 82382 | from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
from collections import defaultdict
from datetime import datetime, timedelta
import json
import logging
import pandas as pd
import pickle
import re
import time
import tra... | apache-2.0 |
plotly/python-api | packages/python/plotly/plotly/graph_objs/choroplethmapbox/_colorbar.py | 1 | 69712 | from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class ColorBar(_BaseTraceHierarchyType):
# class properties
# --------------------
_parent_path_str = "choroplethmapbox"
_path_str = "choroplethmapbox.colorbar"
_valid_props = {
"bgcolo... | mit |
3324fr/spinalcordtoolbox | dev/sct_segment_gray_matter_asman/sct_asman_old.py | 1 | 104827 | #!/usr/bin/env python
########################################################################################################################
#
# Asman et al. groupwise multi-atlas segmentation method implementation
#
#
# -------------------------------------------------------------------------------------------------... | mit |
bretthdavis/standfire | apps/STANDFIRE_v1.1/fuels.py | 1 | 46363 | #!python2
################################################################################
#----------#
# fuels.py #
#----------#
"""
This module is the interface to FVS. Given a FVS variant name, a keyword file
and the corresponding tree file, a user can run a FVS simulation and request
various fuels information from... | gpl-3.0 |
BigDataforYou/movie_recommendation_workshop_1 | big_data_4_you_demo_1/venv/lib/python2.7/site-packages/pandas/core/base.py | 1 | 36967 | """
Base and utility classes for pandas objects.
"""
from pandas import compat
from pandas.compat import builtins
import numpy as np
from pandas.core import common as com
import pandas.core.nanops as nanops
import pandas.lib as lib
from pandas.compat.numpy import function as nv
from pandas.util.decorators import (Appen... | mit |
Merinorus/adaisawesome | Homework/01 - Pandas and Data Wrangling/Intro to Pandas.py | 1 | 39059 |
# coding: utf-8
# # Table of Contents
# <p><div class="lev1"><a href="#Introduction-to-Pandas"><span class="toc-item-num">1 </span>Introduction to Pandas</a></div><div class="lev2"><a href="#Pandas-Data-Structures"><span class="toc-item-num">1.1 </span>Pandas Data Structures</a></div><div class... | gpl-3.0 |
CompPhysics/ThesisProjects | doc/MSc/msc_students/former/AudunHansen/Audun/Notebooks/CCAlgebra_mk4_tab.py | 1 | 83258 | #from IPython.display import display, Math, Latex
#%matplotlib inline
from numpy import *
from itertools import *
from matplotlib.pyplot import *
from copy import copy
from sympy import Symbol, expand
class Combiner():
#Normal ordered operator for cluster algebra (diagrammatic)
def __init__(self... | cc0-1.0 |
coillarach/PCWG | pcwg_tool.py | 1 | 157035 | from Tkinter import *
from tkFileDialog import *
import tkSimpleDialog
import tkMessageBox
from dataset import getSeparatorValue
import Analysis
import configuration
import datetime
import os
import os.path
import pandas as pd
import dateutil
columnSeparator = "|"
filterSeparator = "#"
datePickerFormat = "%Y-%m-%d %H:... | mit |
dpaiton/OpenPV | pv-core/analysis/python/plot_roc.py | 1 | 40329 | """
Plot the highest activity of four different bar positionings
"""
import sys
import numpy as np
import matplotlib.pyplot as plt
import matplotlib.mlab as mlab
import matplotlib.cm as cm
import PVReadSparse as rs
import PVReadWeights as rw
import PVConversions as conv
import scipy.cluster.vq as sp
import math
def ... | epl-1.0 |
NSLS-II-HXN/PyXRF | pyxrf/gui_module/useful_widgets.py | 1 | 39863 | from qtpy.QtWidgets import (QLineEdit, QWidget, QHBoxLayout, QComboBox, QTextEdit,
QSizePolicy, QLabel, QPushButton, QGridLayout, QSlider,
QSpinBox, QCheckBox)
from qtpy.QtCore import Qt, Signal, Slot
from qtpy.QtGui import QPalette, QColor, QFontMetrics, QIntVali... | bsd-3-clause |
jerjorg/BZI | BZI/all_2D.py | 1 | 70767 | """Methods to for calculating and visualizing lattices and Brillouin zones in 2D."""
from numpy.linalg import norm, inv, det
import numpy as np
import matplotlib.pyplot as plt
from mpl_toolkits.mplot3d import Axes3D
import itertools as it
from copy import deepcopy, copy
from scipy.spatial import ConvexHull
from BZI.s... | gpl-3.0 |
pligor/predicting-future-product-prices | 01_imputation/my_fancy_imputation.py | 1 | 32532 | # -*- coding: UTF-8 -*-
from __future__ import division
import sys
import unirest
import json
from time import sleep
import pickle
import numpy as np
import pandas as pd
import time
from datetime import datetime, timedelta
import os
from fancyimpute import KNN, NuclearNormMinimization, SoftImpute, IterativeSVD, MICE, ... | agpl-3.0 |
azariven/BioSig_SEAS | SEAS_Main/simulation/transmission_spectra_simulator.py | 1 | 44393 | #!/usr/bin/env python
#
# Copyright (C) 2017 - Massachusetts Institute of Technology (MIT)
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option... | gpl-3.0 |
Erotemic/ibeis | ibeis/algo/smk/smk_funcs.py | 1 | 40867 | # -*- coding: utf-8 -*-
"""
References:
Jegou's Source Code, Data, and Publications
http://people.rennes.inria.fr/Herve.Jegou/publications.html
To aggregate or not to aggregate: selective match kernels for image search
https://hal.inria.fr/hal-00864684/document
Image search with selective match ke... | apache-2.0 |
yejingxin/PyKrige | pykrige/ok.py | 1 | 33614 | __doc__ = """Code by Benjamin S. Murphy
bscott.murphy@gmail.com
Dependencies:
numpy
scipy
matplotlib
Cython
Classes:
OrdinaryKriging: Convenience class for easy access to 2D Ordinary Kriging.
References:
P.K. Kitanidis, Introduction to Geostatistcs: Applications in Hydrogeology,
... | bsd-3-clause |
jseabold/statsmodels | statsmodels/tsa/holtwinters/model.py | 4 | 69847 | """
Notes
-----
Code written using below textbook as a reference.
Results are checked against the expected outcomes in the text book.
Properties:
Hyndman, Rob J., and George Athanasopoulos. Forecasting: principles and
practice. OTexts, 2014.
Author: Terence L van Zyl
Modified: Kevin Sheppard
"""
from statsmodels.comp... | bsd-3-clause |
jcrudy/sklearntools | sklearntools/sklearntools.py | 1 | 46229 | '''
Created on Feb 11, 2016
@author: jason
'''
from sklearn.base import BaseEstimator, clone, MetaEstimatorMixin
import numpy as np
from six import with_metaclass
from functools import update_wrapper
import sys
from sklearn2code.sym.function import comp
if sys.version_info[0] < 3:
from inspect import getargspec
el... | bsd-3-clause |
fedspendingtransparency/data-act-broker-backend | dataactcore/scripts/load_historical_fpds_files.py | 1 | 47679 | import argparse
import urllib.request
import datetime
import csv
import io
import os
import boto3
import re
import zipfile
import numpy as np
import pandas as pd
import logging
from sqlalchemy.dialects.postgresql import insert
from sqlalchemy.exc import IntegrityError
from dataactcore.config import CONFIG_BROKER
fro... | cc0-1.0 |
jordan-melendez/buqeyemodel | gsum/models.py | 1 | 75656 | from __future__ import division
import docrep
from .helpers import coefficients, hpd, mahalanobis, geometric_sum
import numpy as np
from numpy.linalg import solve, cholesky
import scipy as sp
from scipy.linalg import cho_solve, solve_triangular, inv, eigh
from scipy.special import loggamma
import scipy.stats as st
from... | mit |
tebeka/arrow | python/pyarrow/tests/test_array.py | 1 | 41758 | # -*- coding: utf-8 -*-
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "... | apache-2.0 |
treycausey/scikit-learn | sklearn/tests/test_common.py | 1 | 43845 | """
General tests for all estimators in sklearn.
"""
# Authors: Andreas Mueller <amueller@ais.uni-bonn.de>
# Gael Varoquaux gael.varoquaux@normalesup.org
# License: BSD 3 clause
from __future__ import print_function
import os
import warnings
import sys
import traceback
import inspect
import pickle
import pkg... | bsd-3-clause |
Egdus/SimpleShedSimulator | simpleshedsimulator/core/net.py | 1 | 38464 | #SimpleShedSimulator for quick schedule risk analysis
#Copyright (C) 2014 Anders Jensen
#
#This program is free software: you can redistribute it and/or modify
#it under the terms of the GNU General Public License as published by
#the Free Software Foundation, either version 3 of the License, or
#(at your option) any ... | gpl-3.0 |
bashuk/thesis | main.py | 1 | 36646 | #!/usr/bin/env python
# -*- encoding: utf-8 -*-
""" Optimal trajectory builder (Alex Bashuk's thesis work)."""
import copy
import bisect
import numpy as np
import matplotlib.pyplot as plt
import random
import PIL
import os
import sys
import math
import profilehooks
__author__ = "Alex Bashuk"
__copyright__ = "Copyrig... | mit |
ericfourrier/pandas-patch | pandas_patch/main.py | 1 | 30523 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
"""
@author: efourrier
Purpose : the puropose of this modest patch is to create some new methods for
the class Dataframe in order to simplify a data scientist life.
The module is designed as a monkey patch so just import it before starting your
analysis.
It is providing m... | mit |
phaustin/pyman | Book/chap7/python/chap7_funcs.py | 1 | 55841 | # -*- coding: utf-8 -*-
# ---
# jupyter:
# jupytext:
# cell_metadata_filter: all
# notebook_metadata_filter: all,-language_info
# text_representation:
# extension: .py
# format_name: percent
# format_version: '1.2'
# jupytext_version: 1.2.1
# kernelspec:
# display_name: Pytho... | cc0-1.0 |
chrsrds/scikit-learn | sklearn/cluster/optics_.py | 3 | 37550 | # -*- coding: utf-8 -*-
"""Ordering Points To Identify the Clustering Structure (OPTICS)
These routines execute the OPTICS algorithm, and implement various
cluster extraction methods of the ordered list.
Authors: Shane Grigsby <refuge@rocktalus.com>
Adrin Jalali <adrinjalali@gmail.com>
Erich Schuber... | bsd-3-clause |
schoolie/bokeh | bokeh/core/tests/test_properties.py | 1 | 62944 | from __future__ import absolute_import
import datetime
import unittest
import numpy as np
import pandas as pd
from copy import copy
import pytest
from bokeh.core.properties import (field, value,
NumberSpec, ColorSpec, Bool, Int, Float, Complex, String,
Regex, Seq, List, Dict, Tuple, Instance, Any, Interval, ... | bsd-3-clause |
olafhauk/mne-python | mne/tests/test_epochs.py | 1 | 137806 | # -*- coding: utf-8 -*-
# Author: Alexandre Gramfort <alexandre.gramfort@inria.fr>
# Denis Engemann <denis.engemann@gmail.com>
# Stefan Appelhoff <stefan.appelhoff@mailbox.org>
#
# License: BSD (3-clause)
from copy import deepcopy
from distutils.version import LooseVersion
from functools import partial... | bsd-3-clause |
rsmailach/MultiServerSRPT | ClassBased_Multi_RR.py | 1 | 45800 | #----------------------------------------------------------------------#
# ApproxSRPTE_Multi_RR.py
#
# This application simulates multiple server with Poisson arrivals
# and processing times of a general distribution. There are errors in
# time estimates within a range. Arrivals are assigned to SRPT classes
# using the... | mit |
ClearCorp/odootools | odootools/odootools/odoo/server.py | 1 | 42624 | #!/usr/bin/python2
# -*- coding: utf-8 -*-
########################################################################
#
# Odoo Tools by CLEARCORP S.A.
# Copyright (C) 2009-TODAY CLEARCORP S.A. (<http://clearcorp.co.cr>).
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of ... | agpl-3.0 |
zerothi/sisl | sisl/grid.py | 1 | 65207 | # This Source Code Form is subject to the terms of the Mozilla Public
# License, v. 2.0. If a copy of the MPL was not distributed with this
# file, You can obtain one at https://mozilla.org/MPL/2.0/.
from functools import partial
from numbers import Integral, Real
from math import pi
import numpy as np
from numpy impo... | lgpl-3.0 |
parksandwildlife/wastd | wastd/observations/utils.py | 1 | 200499 | # -*- coding: utf-8 -*-
"""Observation untilities."""
import csv
import io
import json
# from plogger.debug import plogger.debug
import logging
import os
import shutil
from datetime import datetime, timedelta
import pandas
import requests
import xmltodict
from confy import env
from dateutil import parser
from django.c... | mit |
eclee25/flu-SDI-exploratory-age | scripts/create_fluseverity_figs_v3/functions_v3.py | 1 | 76886 | #!/usr/bin/python
##############################################
###Python template
###Author: Elizabeth Lee
###Date: 10/15/14
## Purpose: script of functions for data cleaning and processing to draw flu severity figures; supports figures in create_fluseverity_figs
## v2: swap child:adult OR to adult:child OR
## v3: ... | mit |
FCP-INDI/C-PAC | CPAC/pipeline/cpac_ga_model_generator.py | 1 | 42272 | import re
import os
import sys
import glob
from CPAC.utils.datasource import create_grp_analysis_dataflow
from CPAC.utils import Configuration
def write_new_sub_file(current_mod_path, subject_list, new_participant_list):
# write the new participant list
new_sub_file = os.path.join(current_mod_path,os.path.ba... | bsd-3-clause |
DittmarLab/HGTector | hgtector/database.py | 1 | 31223 | #!/usr/bin/env python3
# ----------------------------------------------------------------------------
# Copyright (c) 2013--, Qiyun Zhu and Katharina Dittmar.
#
# Distributed under the terms of the Modified BSD License.
#
# The full license is in the file LICENSE, distributed with this software.
# --------------------... | bsd-3-clause |
Alex-Ian-Hamilton/sunpy | sunpy/spectra/spectrogram.py | 1 | 42397 | # -*- coding: utf-8 -*-
# Author: Florian Mayer <florian.mayer@bitsrc.org>
"""Classes for spectral analysis."""
from __future__ import division, print_function, absolute_import
import datetime
from random import randint
from copy import copy
from math import floor
import numpy as np
from numpy import ma
from scipy... | bsd-2-clause |
nomad-vagabond/asterion | visualize_data.py | 1 | 31054 | import itertools, string
from copy import deepcopy
import numpy as np
import matplotlib as mpl
import matplotlib.pyplot as plt
from mpl_toolkits.mplot3d import Axes3D
from matplotlib import cm
import learn_data as ld
_axsize = [0.09, 0.05, 0.8, 0.9] # [left, bottom, width, height]
# _cbar_size = [0.9, ... | mit |
pratapvardhan/scikit-learn | sklearn/linear_model/coordinate_descent.py | 1 | 81092 | # Author: Alexandre Gramfort <alexandre.gramfort@inria.fr>
# Fabian Pedregosa <fabian.pedregosa@inria.fr>
# Olivier Grisel <olivier.grisel@ensta.org>
# Gael Varoquaux <gael.varoquaux@inria.fr>
#
# License: BSD 3 clause
import sys
import warnings
from abc import ABCMeta, abstractmethod
import n... | bsd-3-clause |
xccui/flink | flink-python/pyflink/table/table_environment.py | 1 | 88461 | ################################################################################
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this... | apache-2.0 |
jrversteegh/softsailor | deps/scipy-0.10.0b2/scipy/stats/distributions.py | 1 | 213919 | # Functions to implement several important functions for
# various Continous and Discrete Probability Distributions
#
# Author: Travis Oliphant 2002-2011 with contributions from
# SciPy Developers 2004-2011
#
import math
import warnings
from copy import copy
from scipy.misc import comb, derivative
from s... | gpl-3.0 |
adlyons/AWOT | awot/graph/radar_vertical.py | 1 | 30248 | """
awot.graph.radar_vertical
=========================
A group of scripts to create vertical radar plots.
"""
# FUNCTIONS::
# polar_sweep - Plot polar coordinate data on polar coordinate axis
# polar_sweep_grid - Plotting transformed data to Cartesian output
# sweep_to_Cart - Polar coordinates transformed to Cartesia... | gpl-2.0 |
zhouyao1994/incubator-superset | tests/core_tests.py | 1 | 37852 | # Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | apache-2.0 |
amolkahat/pandas | pandas/tests/indexes/test_base.py | 1 | 98659 | # -*- coding: utf-8 -*-
import pytest
from datetime import datetime, timedelta
from decimal import Decimal
from collections import defaultdict
import pandas.util.testing as tm
from pandas.core.dtypes.generic import ABCIndex
from pandas.core.dtypes.common import is_unsigned_integer_dtype
from pandas.core.indexes.api ... | bsd-3-clause |
giacomov/3ML | threeML/utils/data_builders/time_series_builder.py | 1 | 44553 | import copy
import re
import astropy.io.fits as fits
import numpy as np
from threeML.exceptions.custom_exceptions import custom_warnings
from threeML.io.file_utils import file_existing_and_readable
from threeML.io.progress_bar import progress_bar
from threeML.plugins.DispersionSpectrumLike import DispersionSpectrumLi... | bsd-3-clause |
ORTI3D/ORTI3D_code | iliblast/addin.py | 1 | 32992 | import os, sys, inspect
from config import *
from Pht3d import *
from Min3p import *
from geometry import *
from matplotlib import pylab # for having grafs in batch
from Pest import *
from Opgeo import *
from instantFit import *
from modflowWriter import *
class addin:
"""the addin class is used to add buttons or ... | gpl-3.0 |
RRCKI/panda-server | pandaserver/taskbuffer/OraDBProxy.py | 1 | 890929 | """
proxy for database connection
"""
import re
import os
import sys
import json
import time
import copy
import glob
import fcntl
import types
import random
import urllib
import socket
import inspect
import datetime
import commands
import traceback
import warnings
import ErrorCode
import SiteSpec
import CloudSpec
impo... | apache-2.0 |
webeng/DeepLearningTutorials | code/sktheano_cnn_original.py | 1 | 35346 | """
Aaron Berndsen:
A Conformal Neural Network using Theano for computation and structure,
but built to obey sklearn's basic 'fit' 'predict' functionality
*code largely motivated from deeplearning.net examples
and Graham Taylor's "Vanilla RNN" (https://github.com/gwtaylor/theano-rnn/blob/master/rnn.py)
You'll requir... | bsd-3-clause |
kdmurray91/scikit-bio | skbio/diversity/tests/test_driver.py | 1 | 35795 | # ----------------------------------------------------------------------------
# Copyright (c) 2013--, scikit-bio development team.
#
# Distributed under the terms of the Modified BSD License.
#
# The full license is in the file COPYING.txt, distributed with this software.
# --------------------------------------------... | bsd-3-clause |
lucfra/RFHO | rfho/save_and_load.py | 1 | 33269 | import time
from collections import OrderedDict, defaultdict
from functools import reduce, wraps
from inspect import signature
import matplotlib.pyplot as plt
from rfho import as_list
import tensorflow as tf
import rfho as rf
try:
from IPython.display import IFrame
import IPython
except ImportError:
pr... | mit |
roshantha9/AbstractManycoreSim | src/analyse_results/AnalyseResults_Exp_ACTest_MultiSeed_DACVariants.py | 1 | 32302 | import sys, os, csv, pprint, math
from collections import OrderedDict
import numpy as np
import random
import shutil
import math
import matplotlib
matplotlib.use('Qt4Agg')
import matplotlib.pyplot as plt
plt.style.use('bmh_rosh')
#from mpl_toolkits.mplot3d import Axes3D
import itertools
from itertools import cycle # ... | gpl-3.0 |
analysiscenter/dataset | batchflow/pipeline.py | 1 | 62902 | """ Contains pipeline class """
import sys
import time
from functools import partial
import traceback
import threading
import concurrent.futures as cf
import asyncio
import logging
import warnings
from cProfile import Profile
from pstats import Stats
import queue as q
import numpy as np
import pandas as pd
from .base ... | apache-2.0 |
hobson/pug-invest | pug/invest/util.py | 1 | 46263 | # util.py
from __future__ import print_function
from collections import Mapping, OrderedDict
import datetime
import itertools
import random
import warnings
import pandas as pd
np = pd.np
from scipy import integrate
from matplotlib import pyplot as plt
import seaborn
from scipy.optimize import minimize
from scipy.si... | mit |
wronk/mne-python | mne/viz/raw.py | 1 | 33845 | """Functions to plot raw M/EEG data
"""
from __future__ import print_function
# Authors: Eric Larson <larson.eric.d@gmail.com>
# Jaakko Leppakangas <jaeilepp@student.jyu.fi>
#
# License: Simplified BSD
import copy
from functools import partial
import numpy as np
from ..externals.six import string_types
fro... | bsd-3-clause |
dsm054/pandas | pandas/tests/test_algos.py | 1 | 70722 | # -*- coding: utf-8 -*-
import numpy as np
import pytest
from numpy.random import RandomState
from numpy import nan
from datetime import datetime
from itertools import permutations
import struct
from pandas import (Series, Categorical, CategoricalIndex,
Timestamp, DatetimeIndex, Index, IntervalInd... | bsd-3-clause |
valohai/valohai-cli | valohai_cli/_vendor/tabulate.py | 1 | 56476 | # type: ignore
# -*- coding: utf-8 -*-
# Imported from
# https://bitbucket.org/astanin/python-tabulate/raw/a4c22260a8b01c9cafd57de9465ba45394a4c027/tabulate.py
#
# This module is:
# Copyright (c) 2011-2017 Sergey Astanin
#
# Permission is hereby granted, free of charge, to any person obtaining
# a copy of this s... | mit |
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