Split (1)

train · 64.8k rows

Unnamed: 0 int64 0 64.8k	seqname stringlengths 4 10	source stringclasses 2 values	feature stringclasses 1 value	start int64 1 249M	end int64 107 249M	score float64 8 205k	strand stringclasses 2 values	gene_id stringlengths 17 24	gene_type stringlengths 3 34	gene_name stringlengths 2 25	level int64 1 3	havana_gene stringlengths 20 22 ⌀	tag stringclasses 25 values
1,000	GL000253.2	ENSEMBL	gene	2,174,495	2,174,797	303	+	ENSG00000266263.1	misc_RNA	RF00100	3	null	null
1,001	GL000253.2	HAVANA	gene	2,177,227	2,186,160	3,994	-	ENSG00000231444.1	processed_transcript	DDR1-DT	2	OTTHUMG00000149215.1	null
1,002	GL000253.2	HAVANA	gene	2,191,217	2,210,394	5,689	+	ENSG00000234078.10	protein_coding	DDR1	2	OTTHUMG00000149219.5	null
1,003	GL000253.2	HAVANA	gene	2,218,420	2,224,342	2,353	+	ENSG00000233149.10	protein_coding	GTF2H4	2	OTTHUMG00000149225.2	overlapping_locus
1,004	GL000253.2	ENSEMBL	gene	2,224,441	2,236,694	4,070	+	ENSG00000285089.1	protein_coding	VARS2	3	null	null
1,005	GL000253.2	HAVANA	gene	2,218,478	2,236,697	8,454	+	ENSG00000223494.10	protein_coding	VARS2	2	OTTHUMG00000149224.2	overlapping_locus
1,006	GL000253.2	HAVANA	gene	2,241,591	2,242,413	691	-	ENSG00000230072.2	protein_coding	SFTA2	2	OTTHUMG00000149231.2	null
1,007	GL000253.2	ENSEMBL	gene	2,242,856	2,242,947	92	-	ENSG00000265323.1	misc_RNA	RF00019	3	null	null
1,008	GL000253.2	HAVANA	gene	2,293,961	2,300,241	3,883	+	ENSG00000223590.5	protein_coding	MUC21	2	OTTHUMG00000149232.2	null
1,009	GL000253.2	HAVANA	gene	2,320,965	2,345,917	6,019	+	ENSG00000231474.5	processed_transcript	BX927139.1	2	OTTHUMG00000149216.1	null
1,010	GL000253.2	HAVANA	gene	2,363,962	2,370,397	2,183	+	ENSG00000237894.6	transcribed_unprocessed_pseudogene	HCG22	2	OTTHUMG00000149233.2	null
1,011	GL000253.2	ENSEMBL	gene	2,393,513	2,393,612	100	+	ENSG00000263367.1	snRNA	RF00026	3	null	null
1,012	GL000253.2	HAVANA	gene	2,421,726	2,423,062	1,140	-	ENSG00000231624.2	protein_coding	C6orf15	2	OTTHUMG00000149238.1	null
1,013	GL000253.2	HAVANA	gene	2,425,650	2,430,956	2,503	-	ENSG00000237114.2	protein_coding	CDSN	2	OTTHUMG00000149241.2	null
1,014	GL000253.2	HAVANA	gene	2,448,059	2,449,875	1,152	-	ENSG00000234605.2	protein_coding	PSORS1C2	2	OTTHUMG00000149235.1	null
1,015	GL000253.2	HAVANA	gene	2,425,264	2,450,563	4,688	+	ENSG00000231094.8	protein_coding	PSORS1C1	2	OTTHUMG00000149236.1	null
1,016	GL000253.2	HAVANA	gene	2,451,244	2,451,430	187	+	ENSG00000225714.1	processed_pseudogene	POLR2LP1	2	OTTHUMG00000149237.1	null
1,017	GL000253.2	HAVANA	gene	2,452,954	2,468,748	4,556	-	ENSG00000223533.8	protein_coding	CCHCR1	2	OTTHUMG00000149378.3	null
1,018	GL000253.2	HAVANA	gene	2,469,087	2,474,716	3,281	+	ENSG00000224941.6	protein_coding	TCF19	2	OTTHUMG00000149379.2	null
1,019	GL000253.2	HAVANA	gene	2,474,838	2,481,213	1,880	-	ENSG00000230336.9	protein_coding	POU5F1	2	OTTHUMG00000149239.2	null
1,020	GL000253.2	ENSEMBL	gene	2,481,082	2,483,105	108	+	ENSG00000257215.2	protein_coding	CR847794.2	3	null	null
1,021	GL000253.2	HAVANA	gene	2,484,255	2,488,424	593	-	ENSG00000226422.1	processed_transcript	PSORS1C3	2	OTTHUMG00000149242.1	null
1,022	GL000253.2	HAVANA	gene	2,508,305	2,508,726	167	+	ENSG00000238148.2	processed_transcript	HCG27	2	OTTHUMG00000149217.1	fragmented_locus
1,023	GL000253.2	HAVANA	gene	2,510,714	2,511,187	474	-	ENSG00000229823.1	processed_transcript	CR847794.1	2	OTTHUMG00000149240.1	null
1,024	GL000253.2	HAVANA	gene	2,577,801	2,581,172	2,569	-	ENSG00000237022.10	protein_coding	HLA-C	2	OTTHUMG00000149248.5	null
1,025	GL000253.2	HAVANA	gene	2,584,583	2,587,755	3,173	+	ENSG00000229265.1	processed_pseudogene	USP8P1	2	OTTHUMG00000149253.1	null
1,026	GL000253.2	HAVANA	gene	2,589,318	2,590,520	1,203	+	ENSG00000237448.3	processed_pseudogene	RPL3P2	2	OTTHUMG00000149252.1	null
1,027	GL000253.2	HAVANA	gene	2,596,507	2,597,958	1,452	-	ENSG00000234980.1	processed_pseudogene	WASF5P	2	OTTHUMG00000149251.1	null
1,028	GL000253.2	HAVANA	gene	2,616,799	2,617,532	306	-	ENSG00000228954.1	unprocessed_pseudogene	BX927178.1	2	OTTHUMG00000149250.1	null
1,029	GL000253.2	HAVANA	gene	2,578,541	2,665,857	2,743	-	ENSG00000224608.10	protein_coding	HLA-B	2	OTTHUMG00000149247.4	null
1,030	GL000253.2	HAVANA	gene	2,674,960	2,675,506	547	-	ENSG00000233604.1	processed_pseudogene	DHFRP2	2	OTTHUMG00000149244.1	null
1,031	GL000253.2	ENSEMBL	gene	2,678,743	2,678,849	107	+	ENSG00000263701.1	snRNA	RF00026	3	null	null
1,032	GL000253.2	HAVANA	gene	2,686,021	2,686,622	602	+	ENSG00000224131.1	processed_pseudogene	CR318637.1	2	OTTHUMG00000149245.1	null
1,033	GL000253.2	HAVANA	gene	2,689,018	2,689,446	429	+	ENSG00000226732.1	processed_pseudogene	ZDHHC20P2	2	OTTHUMG00000149246.1	null
1,034	GL000253.2	HAVANA	gene	2,690,681	2,690,895	53	-	ENSG00000228179.1	unprocessed_pseudogene	HLA-S	2	OTTHUMG00000149249.1	null
1,035	GL000253.2	ENSEMBL	gene	2,710,743	2,710,841	99	-	ENSG00000266747.1	misc_RNA	RF00019	3	null	null
1,036	GL000253.2	HAVANA	gene	2,708,377	2,724,826	3,835	+	ENSG00000235233.9	protein_coding	MICA	2	OTTHUMG00000149254.2	null
1,037	GL000253.2	HAVANA	gene	2,749,706	2,755,003	2,140	+	ENSG00000231836.1	processed_transcript	LINC01149	2	OTTHUMG00000149243.1	null
1,038	GL000253.2	HAVANA	gene	2,810,695	2,816,200	2,503	+	ENSG00000231372.8	protein_coding	MICB	2	OTTHUMG00000149269.2	null
1,039	GL000253.2	HAVANA	gene	2,824,562	2,825,373	498	-	ENSG00000229216.4	processed_pseudogene	PPIAP9	2	OTTHUMG00000149266.1	null
1,040	GL000253.2	HAVANA	gene	2,833,187	2,833,766	580	+	ENSG00000236273.1	processed_pseudogene	RPL15P4	2	OTTHUMG00000149268.1	null
1,041	GL000253.2	HAVANA	gene	2,833,790	2,835,305	955	+	ENSG00000238238.2	protein_coding	MCCD1	2	OTTHUMG00000149267.1	null
1,042	GL000253.2	ENSEMBL	gene	2,841,445	2,841,520	76	-	ENSG00000265116.1	snoRNA	SNORD117	3	null	null
1,043	GL000253.2	ENSEMBL	gene	2,846,154	2,846,231	78	-	ENSG00000265325.1	snoRNA	SNORD84	3	null	null
1,044	GL000253.2	HAVANA	gene	2,847,357	2,848,191	527	+	ENSG00000231647.1	processed_transcript	DDX39B-AS1	2	OTTHUMG00000149255.1	null
1,045	GL000253.2	HAVANA	gene	2,835,292	2,851,631	7,195	-	ENSG00000225859.10	protein_coding	DDX39B	2	OTTHUMG00000149295.5	ncRNA_host,overlapping_locus
1,046	GL000253.2	HAVANA	gene	2,849,515	2,851,897	1,652	-	ENSG00000226850.2	protein_coding	ATP6V1G2	2	OTTHUMG00000149291.1	overlapping_locus
1,047	GL000253.2	HAVANA	gene	2,851,919	2,863,876	1,779	+	ENSG00000227565.8	protein_coding	NFKBIL1	2	OTTHUMG00000149280.2	null
1,048	GL000253.2	HAVANA	gene	2,877,095	2,879,365	1,737	+	ENSG00000231408.8	protein_coding	LTA	2	OTTHUMG00000149296.1	null
1,049	GL000253.2	HAVANA	gene	2,880,608	2,883,377	1,676	+	ENSG00000228321.3	protein_coding	TNF	2	OTTHUMG00000149278.1	null
1,050	GL000253.2	HAVANA	gene	2,885,596	2,887,563	926	-	ENSG00000223448.7	protein_coding	LTB	2	OTTHUMG00000149287.1	null
1,051	GL000253.2	HAVANA	gene	2,891,165	2,893,950	2,294	+	ENSG00000231048.8	protein_coding	LST1	2	OTTHUMG00000149282.2	null
1,052	GL000253.2	HAVANA	gene	2,893,936	2,898,026	1,212	-	ENSG00000236979.6	protein_coding	NCR3	2	OTTHUMG00000149286.2	null
1,053	GL000253.2	ENSEMBL	gene	2,928,117	2,928,248	132	+	ENSG00000266847.1	snoRNA	SNORA38	3	null	null
1,054	GL000253.2	HAVANA	gene	2,925,761	2,942,812	9,115	+	ENSG00000226618.9	protein_coding	PRRC2A	2	OTTHUMG00000149283.1	ncRNA_host
1,055	GL000253.2	HAVANA	gene	2,944,068	2,957,751	5,332	-	ENSG00000228760.10	protein_coding	BAG6	2	OTTHUMG00000149381.3	null
1,056	GL000253.2	HAVANA	gene	2,957,462	2,963,256	1,237	+	ENSG00000231974.6	protein_coding	APOM	2	OTTHUMG00000149288.2	null
1,057	GL000253.2	HAVANA	gene	2,963,375	2,965,768	673	+	ENSG00000233169.1	processed_transcript	C6orf47-AS1	2	OTTHUMG00000149277.1	null
1,058	GL000253.2	HAVANA	gene	2,963,344	2,965,819	2,476	-	ENSG00000228177.2	protein_coding	C6orf47	2	OTTHUMG00000149290.2	null
1,059	GL000253.2	ENSEMBL	gene	2,968,335	2,968,448	114	+	ENSG00000264915.1	misc_RNA	RF00019	3	null	null
1,060	GL000253.2	HAVANA	gene	2,966,276	2,971,330	3,528	-	ENSG00000223932.6	protein_coding	GPANK1	2	OTTHUMG00000149284.3	null
1,061	GL000253.2	HAVANA	gene	2,970,283	2,977,393	3,349	+	ENSG00000232960.11	protein_coding	CSNK2B	2	OTTHUMG00000149279.1	overlapping_locus
1,062	GL000253.2	HAVANA	gene	2,971,149	2,977,497	1,427	+	ENSG00000258543.7	protein_coding	CR354443.1	2	OTTHUMG00000171222.1	overlapping_locus
1,063	GL000253.2	HAVANA	gene	2,975,426	2,978,593	2,589	+	ENSG00000240433.4	protein_coding	LY6G5B	2	OTTHUMG00000149380.1	overlapping_locus
1,064	GL000253.2	HAVANA	gene	2,981,731	2,989,087	2,828	-	ENSG00000228883.9	protein_coding	LY6G5C	2	OTTHUMG00000149289.1	null
1,065	GL000253.2	HAVANA	gene	2,991,996	3,008,464	3,850	-	ENSG00000224552.9	protein_coding	ABHD16A	2	OTTHUMG00000149285.2	null
1,066	GL000253.2	HAVANA	gene	3,011,934	3,015,647	920	+	ENSG00000239741.3	protein_coding	LY6G6F	2	OTTHUMG00000149293.1	overlapping_locus
1,067	GL000253.2	HAVANA	gene	3,017,386	3,018,862	506	-	ENSG00000236210.8	protein_coding	LY6G6E	2	OTTHUMG00000149294.1	null
1,068	GL000253.2	HAVANA	gene	3,020,406	3,022,850	614	+	ENSG00000225993.9	protein_coding	LY6G6D	2	OTTHUMG00000149383.2	overlapping_locus
1,069	GL000253.2	HAVANA	gene	3,011,953	3,022,964	1,266	+	ENSG00000258635.1	protein_coding	LY6G6F-LY6G6D	2	OTTHUMG00000171200.1	overlapping_locus
1,070	GL000253.2	HAVANA	gene	3,023,694	3,026,891	1,103	-	ENSG00000235452.2	protein_coding	LY6G6C	2	OTTHUMG00000149297.2	null
1,071	GL000253.2	HAVANA	gene	3,023,640	3,031,757	2,861	+	ENSG00000228090.6	protein_coding	MPIG6B	2	OTTHUMG00000149292.1	null
1,072	GL000253.2	HAVANA	gene	3,032,085	3,035,664	2,538	-	ENSG00000233076.6	protein_coding	DDAH2	2	OTTHUMG00000149312.2	overlapping_locus
1,073	GL000253.2	HAVANA	gene	3,035,628	3,044,810	1,942	-	ENSG00000226651.6	protein_coding	CLIC1	2	OTTHUMG00000149281.1	overlapping_locus
1,074	GL000253.2	HAVANA	gene	3,045,038	3,052,473	1,416	+	ENSG00000230961.10	protein_coding	MSH5	2	OTTHUMG00000149382.3	null
1,075	GL000253.2	HAVANA	gene	3,162,875	3,168,122	4,822	-	ENSG00000223957.6	protein_coding	NEU1	2	OTTHUMG00000149313.2	null
1,076	GL000253.2	HAVANA	gene	3,168,408	3,168,651	244	-	ENSG00000203463.2	processed_transcript	SLC44A4	2	OTTHUMG00000149314.1	null
1,077	GL000253.2	HAVANA	gene	3,239,415	3,246,691	787	-	ENSG00000223747.1	processed_transcript	C4B-AS1	2	OTTHUMG00000149316.1	null
1,078	GL000253.2	HAVANA	gene	3,225,156	3,250,651	5,241	+	ENSG00000204364.10	protein_coding	C2	2	OTTHUMG00000149315.3	overlapping_locus
1,079	GL000253.2	HAVANA	gene	3,250,627	3,255,741	3,490	+	ENSG00000204359.9	protein_coding	CFB	2	OTTHUMG00000149355.3	overlapping_locus
1,080	GL000253.2	ENSEMBL	gene	3,383,514	3,383,634	121	-	ENSG00000263418.1	rRNA	RF00001	3	null	null
1,081	GL000253.2	HAVANA	gene	3,369,799	3,403,206	7,227	-	ENSG00000236221.9	protein_coding	TNXB	2	OTTHUMG00000149375.4	ncRNA_host
1,082	GL000253.2	HAVANA	gene	3,453,360	3,459,374	4,261	-	ENSG00000229488.9	protein_coding	PRRT1	2	OTTHUMG00000149317.2	null
1,083	GL000253.2	HAVANA	gene	3,469,589	3,473,262	2,596	+	ENSG00000243897.8	protein_coding	EGFL8	2	OTTHUMG00000149319.4	overlapping_locus
1,084	GL000253.2	HAVANA	gene	3,458,442	3,476,959	6,987	+	ENSG00000168452.21	protein_coding	PPT2	2	OTTHUMG00000149376.6	overlapping_locus
1,085	GL000253.2	HAVANA	gene	3,473,193	3,483,077	3,631	-	ENSG00000227642.9	protein_coding	AGPAT1	2	OTTHUMG00000149324.1	null
1,086	GL000253.2	HAVANA	gene	3,483,335	3,485,774	1,178	+	ENSG00000228907.5	protein_coding	RNF5	2	OTTHUMG00000149318.1	null
1,087	GL000253.2	HAVANA	gene	3,485,949	3,489,305	2,077	-	ENSG00000229058.10	protein_coding	AGER	2	OTTHUMG00000149320.2	null
1,088	GL000253.2	HAVANA	gene	3,489,722	3,495,164	4,341	-	ENSG00000232005.7	protein_coding	PBX2	2	OTTHUMG00000149321.2	null
1,089	GL000253.2	HAVANA	gene	3,495,744	3,500,501	1,854	-	ENSG00000236697.7	protein_coding	GPSM3	2	OTTHUMG00000149322.2	overlapping_locus
1,090	GL000253.2	HAVANA	gene	3,499,821	3,529,069	9,743	-	ENSG00000232339.5	protein_coding	NOTCH4	2	OTTHUMG00000149323.2	overlapping_locus
1,091	GL000253.2	HAVANA	gene	3,630,215	3,631,174	960	+	ENSG00000233160.1	processed_pseudogene	HNRNPA1P2	2	OTTHUMG00000149331.1	null
1,092	GL000253.2	ENSEMBL	gene	3,657,881	3,657,987	107	+	ENSG00000266660.1	snRNA	RF00026	3	null	null
1,093	GL000253.2	HAVANA	gene	3,597,691	3,676,908	2,297	-	ENSG00000206245.11	protein_coding	C6orf10	2	OTTHUMG00000149330.1	null
1,094	GL000253.2	HAVANA	gene	3,695,502	3,698,679	611	+	ENSG00000229903.1	processed_transcript	HCG23	2	OTTHUMG00000149325.1	null
1,095	GL000253.2	HAVANA	gene	3,698,956	3,712,147	1,470	-	ENSG00000225412.7	protein_coding	BTNL2	2	OTTHUMG00000149326.4	null
1,096	GL000253.2	HAVANA	gene	3,744,059	3,749,270	1,280	+	ENSG00000226260.9	protein_coding	HLA-DRA	2	OTTHUMG00000149327.1	null
1,097	GL000253.2	HAVANA	gene	3,764,073	3,777,729	343	-	ENSG00000234164.2	unprocessed_pseudogene	HLA-DRB9	2	OTTHUMG00000149328.1	null
1,098	GL000253.2	HAVANA	gene	3,789,961	3,790,056	96	-	ENSG00000223359.2	unprocessed_pseudogene	CR354545.1	2	OTTHUMG00000149904.1	null
1,099	GL000253.2	ENSEMBL	gene	3,815,536	3,815,683	148	-	ENSG00000265059.1	snRNA	RF00003	3	null	null

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