Split (1)

train · 64.8k rows

Unnamed: 0 int64 0 64.8k	seqname stringlengths 4 10	source stringclasses 2 values	feature stringclasses 1 value	start int64 1 249M	end int64 107 249M	score float64 8 205k	strand stringclasses 2 values	gene_id stringlengths 17 24	gene_type stringlengths 3 34	gene_name stringlengths 2 25	level int64 1 3	havana_gene stringlengths 20 22 ⌀	tag stringclasses 25 values
900	GL000253.2	HAVANA	gene	762,635	775,681	877	+	ENSG00000228370.1	processed_transcript	BX927133.1	2	OTTHUMG00000149160.1	null
901	GL000253.2	HAVANA	gene	794,551	798,699	2,777	+	ENSG00000225426.5	processed_transcript	LINC01015	2	OTTHUMG00000149161.1	null
902	GL000253.2	HAVANA	gene	802,835	803,918	1,084	-	ENSG00000237811.1	unprocessed_pseudogene	GPR53P	2	OTTHUMG00000149173.1	null
903	GL000253.2	HAVANA	gene	818,377	819,324	948	+	ENSG00000223441.2	unprocessed_pseudogene	OR2I1P	2	OTTHUMG00000149264.1	null
904	GL000253.2	HAVANA	gene	820,771	825,085	990	-	ENSG00000224654.2	protein_coding	UBD	2	OTTHUMG00000149260.1	overlapping_locus
905	GL000253.2	HAVANA	gene	839,092	840,019	928	+	ENSG00000225034.2	unprocessed_pseudogene	OR2H5P	2	OTTHUMG00000149262.1	null
906	GL000253.2	HAVANA	gene	842,643	842,932	290	+	ENSG00000224241.2	processed_pseudogene	TMEM183AP1	2	OTTHUMG00000149265.1	null
907	GL000253.2	ENSEMBL	gene	847,433	847,516	84	+	ENSG00000265663.1	snoRNA	SNORD32B	3	null	null
908	GL000253.2	HAVANA	gene	847,692	848,209	518	+	ENSG00000224146.1	processed_pseudogene	RPL13AP	2	OTTHUMG00000149259.1	null
909	GL000253.2	HAVANA	gene	852,639	854,222	1,584	+	ENSG00000227044.4	protein_coding	OR2H2	2	OTTHUMG00000149257.1	null
910	GL000253.2	HAVANA	gene	820,771	898,309	7,011	-	ENSG00000237051.8	protein_coding	GABBR1	2	OTTHUMG00000149256.1	overlapping_locus
911	GL000253.2	HAVANA	gene	901,182	901,465	284	-	ENSG00000228130.3	processed_pseudogene	SUMO2P1	2	OTTHUMG00000149258.1	null
912	GL000253.2	HAVANA	gene	922,098	937,486	3,054	+	ENSG00000230885.9	protein_coding	MOG	2	OTTHUMG00000149261.1	null
913	GL000253.2	HAVANA	gene	937,506	946,215	2,149	-	ENSG00000232099.7	protein_coding	ZFP57	2	OTTHUMG00000149263.1	null
914	GL000253.2	HAVANA	gene	973,224	973,646	423	-	ENSG00000226303.1	processed_pseudogene	ZDHHC20P1	2	OTTHUMG00000149162.1	null
915	GL000253.2	HAVANA	gene	985,643	986,633	991	-	ENSG00000229573.1	unprocessed_pseudogene	BX927250.1	2	OTTHUMG00000149179.1	null
916	GL000253.2	HAVANA	gene	989,333	989,803	471	-	ENSG00000242039.1	transcribed_processed_pseudogene	RPL23AP1	2	OTTHUMG00000149163.1	overlapping_locus
917	GL000253.2	HAVANA	gene	985,437	1,001,192	4,340	+	ENSG00000237508.10	protein_coding	HLA-F	2	OTTHUMG00000149164.3	null
918	GL000253.2	HAVANA	gene	1,010,954	1,011,178	225	+	ENSG00000228900.1	unprocessed_pseudogene	BX927182.1	2	OTTHUMG00000149167.1	null
919	GL000253.2	HAVANA	gene	1,004,394	1,011,634	1,157	-	ENSG00000250154.1	transcribed_unprocessed_pseudogene	MICE	2	OTTHUMG00000149166.1	overlapping_locus
920	GL000253.2	HAVANA	gene	989,265	1,011,714	4,172	-	ENSG00000226378.8	processed_transcript	HLA-F-AS1	2	OTTHUMG00000149169.1	overlapping_locus
921	GL000253.2	ENSEMBL	gene	1,013,035	1,013,136	102	+	ENSG00000264495.1	misc_RNA	RF00019	3	null	null
922	GL000253.2	HAVANA	gene	1,013,391	1,013,811	421	-	ENSG00000233023.1	processed_pseudogene	IFITM4P	2	OTTHUMG00000149168.1	null
923	GL000253.2	HAVANA	gene	1,054,329	1,055,326	998	-	ENSG00000226379.4	unprocessed_pseudogene	HCG4	2	OTTHUMG00000149191.1	null
924	GL000253.2	HAVANA	gene	1,053,436	1,060,310	5,646	+	ENSG00000224736.7	transcribed_unprocessed_pseudogene	HLA-V	2	OTTHUMG00000149170.2	null
925	GL000253.2	HAVANA	gene	1,062,914	1,064,922	734	+	ENSG00000261134.1	unprocessed_pseudogene	HLA-P	2	OTTHUMG00000172785.1	null
926	GL000253.2	HAVANA	gene	1,065,694	1,066,490	797	-	ENSG00000233465.2	processed_pseudogene	RPL7AP7	2	OTTHUMG00000149171.1	null
927	GL000253.2	HAVANA	gene	1,075,063	1,075,194	132	-	ENSG00000229461.1	unprocessed_pseudogene	MICG	2	OTTHUMG00000149172.1	null
928	GL000253.2	HAVANA	gene	1,089,871	1,090,850	980	-	ENSG00000224801.1	unprocessed_pseudogene	HCG4P8	2	OTTHUMG00000149181.1	null
929	GL000253.2	HAVANA	gene	1,089,454	1,093,611	1,763	+	ENSG00000235680.8	protein_coding	HLA-G	2	OTTHUMG00000149372.2	null
930	GL000253.2	HAVANA	gene	1,114,489	1,114,617	129	-	ENSG00000235498.1	unprocessed_pseudogene	BX927141.2	2	OTTHUMG00000149175.1	null
931	GL000253.2	HAVANA	gene	1,143,746	1,144,708	963	-	ENSG00000231197.1	unprocessed_pseudogene	BX927141.1	2	OTTHUMG00000149184.1	null
932	GL000253.2	HAVANA	gene	1,144,204	1,146,920	1,082	+	ENSG00000223463.3	unprocessed_pseudogene	HLA-H	2	OTTHUMG00000149174.1	null
933	GL000253.2	HAVANA	gene	1,152,988	1,154,119	450	+	ENSG00000226727.1	unprocessed_pseudogene	HLA-T	2	OTTHUMG00000149185.1	null
934	GL000253.2	HAVANA	gene	1,162,877	1,163,243	192	+	ENSG00000225926.1	unprocessed_pseudogene	DDX39BP1	2	OTTHUMG00000149180.1	null
935	GL000253.2	HAVANA	gene	1,164,117	1,164,979	328	-	ENSG00000226940.1	unprocessed_pseudogene	MCCD1P1	2	OTTHUMG00000149182.1	null
936	GL000253.2	HAVANA	gene	1,182,347	1,183,337	991	-	ENSG00000226563.3	unprocessed_pseudogene	HCG4B	2	OTTHUMG00000149193.1	null
937	GL000253.2	HAVANA	gene	1,182,823	1,185,596	1,034	+	ENSG00000232816.1	unprocessed_pseudogene	HLA-K	2	OTTHUMG00000149192.1	null
938	GL000253.2	HAVANA	gene	1,188,708	1,188,893	186	+	ENSG00000226354.1	unprocessed_pseudogene	HLA-U	2	OTTHUMG00000149189.1	null
939	GL000253.2	HAVANA	gene	1,196,617	1,197,608	992	-	ENSG00000226109.1	unprocessed_pseudogene	CR382333.1	2	OTTHUMG00000149186.1	null
940	GL000253.2	HAVANA	gene	1,195,801	1,200,442	2,708	+	ENSG00000231834.10	protein_coding	HLA-A	2	OTTHUMG00000149177.2	null
941	GL000253.2	HAVANA	gene	1,217,355	1,219,320	773	+	ENSG00000230915.1	unprocessed_pseudogene	HLA-W	2	OTTHUMG00000149188.2	null
942	GL000253.2	HAVANA	gene	1,231,535	1,233,198	813	-	ENSG00000230745.1	unprocessed_pseudogene	MICD	2	OTTHUMG00000149187.1	null
943	GL000253.2	HAVANA	gene	1,235,852	1,239,146	656	+	ENSG00000227647.2	processed_transcript	HCG9	2	OTTHUMG00000149190.1	null
944	GL000253.2	HAVANA	gene	1,253,935	1,254,331	258	+	ENSG00000224362.1	unprocessed_pseudogene	DDX39BP2	2	OTTHUMG00000149183.1	null
945	GL000253.2	HAVANA	gene	1,255,163	1,256,040	335	-	ENSG00000231745.1	unprocessed_pseudogene	MCCD1P2	2	OTTHUMG00000149176.1	null
946	GL000253.2	HAVANA	gene	1,266,852	1,267,847	996	-	ENSG00000225086.1	unprocessed_pseudogene	BX927229.1	2	OTTHUMG00000149178.1	overlapping_locus
947	GL000253.2	HAVANA	gene	1,267,314	1,270,687	1,634	+	ENSG00000223439.7	transcribed_unprocessed_pseudogene	HLA-J	2	OTTHUMG00000149194.1	null
948	GL000253.2	HAVANA	gene	1,292,463	1,293,753	984	+	ENSG00000224108.1	processed_pseudogene	ETF1P1	2	OTTHUMG00000149270.1	null
949	GL000253.2	ENSEMBL	gene	1,296,666	1,296,733	68	+	ENSG00000278049.1	misc_RNA	RF02218	3	null	null
950	GL000253.2	ENSEMBL	gene	1,318,872	1,318,947	76	+	ENSG00000277415.1	misc_RNA	RF02219	3	null	null
951	GL000253.2	ENSEMBL	gene	1,321,834	1,321,937	104	+	ENSG00000277085.1	misc_RNA	RF02220	3	null	null
952	GL000253.2	HAVANA	gene	1,261,741	1,322,394	20,815	-	ENSG00000235394.6	processed_transcript	ZNRD1ASP	2	OTTHUMG00000149195.1	overlapping_locus
953	GL000253.2	HAVANA	gene	1,319,656	1,325,658	3,669	+	ENSG00000235176.6	protein_coding	ZNRD1	2	OTTHUMG00000149276.1	ncRNA_host
954	GL000253.2	HAVANA	gene	1,327,458	1,331,083	2,421	+	ENSG00000236560.6	protein_coding	PPP1R11	2	OTTHUMG00000149273.3	null
955	GL000253.2	HAVANA	gene	1,331,016	1,336,637	2,206	-	ENSG00000237733.8	protein_coding	RNF39	2	OTTHUMG00000149271.1	null
956	GL000253.2	HAVANA	gene	1,363,614	1,373,816	3,537	-	ENSG00000225130.9	protein_coding	TRIM31	2	OTTHUMG00000149274.1	null
957	GL000253.2	HAVANA	gene	1,365,957	1,375,434	549	+	ENSG00000237050.1	processed_transcript	TRIM31-AS1	2	OTTHUMG00000149197.1	null
958	GL000253.2	ENSEMBL	gene	1,443,522	1,443,683	162	-	ENSG00000263589.1	snoRNA	RF00554	3	null	null
959	GL000253.2	HAVANA	gene	1,446,830	1,459,457	2,497	+	ENSG00000237046.8	protein_coding	TRIM40	2	OTTHUMG00000149272.1	null
960	GL000253.2	HAVANA	gene	1,462,667	1,471,655	3,546	-	ENSG00000235025.8	protein_coding	TRIM10	2	OTTHUMG00000149275.1	null
961	GL000253.2	HAVANA	gene	1,473,908	1,483,398	2,515	+	ENSG00000233599.8	protein_coding	TRIM15	2	OTTHUMG00000149196.2	null
962	GL000253.2	HAVANA	gene	1,497,456	1,499,277	1,203	-	ENSG00000226175.1	processed_pseudogene	PAIP1P1	2	OTTHUMG00000149198.1	overlapping_locus
963	GL000253.2	HAVANA	gene	1,495,111	1,524,080	4,378	-	ENSG00000231002.7	protein_coding	TRIM26	2	OTTHUMG00000149377.3	overlapping_locus
964	GL000253.2	HAVANA	gene	1,548,946	1,552,507	753	+	ENSG00000231928.1	unprocessed_pseudogene	TRIM26BP	2	OTTHUMG00000149199.1	null
965	GL000253.2	HAVANA	gene	1,569,834	1,577,184	4,769	+	ENSG00000239618.6	transcribed_unprocessed_pseudogene	HLA-L	2	OTTHUMG00000149208.1	null
966	GL000253.2	HAVANA	gene	1,544,684	1,636,359	759	-	ENSG00000240924.5	processed_transcript	HCG17	2	OTTHUMG00000149213.1	overlapping_locus
967	GL000253.2	HAVANA	gene	1,601,038	1,637,375	5,637	-	ENSG00000230660.6	processed_transcript	HCG18	2	OTTHUMG00000149203.1	overlapping_locus
968	GL000253.2	HAVANA	gene	1,636,704	1,653,960	4,226	+	ENSG00000226437.10	protein_coding	TRIM39	2	OTTHUMG00000149211.2	null
969	GL000253.2	HAVANA	gene	1,639,537	1,657,118	2,719	+	ENSG00000239865.6	protein_coding	RPP21	2	OTTHUMG00000149201.2	null
970	GL000253.2	HAVANA	gene	1,661,650	1,661,784	135	+	ENSG00000234095.1	unprocessed_pseudogene	HLA-N	2	OTTHUMG00000149202.1	null
971	GL000253.2	HAVANA	gene	1,669,513	1,670,146	634	-	ENSG00000236422.1	processed_pseudogene	BX927214.1	2	OTTHUMG00000149204.1	null
972	GL000253.2	HAVANA	gene	1,673,345	1,674,513	1,169	-	ENSG00000231659.1	processed_pseudogene	UBQLN1P1	2	OTTHUMG00000149206.1	null
973	GL000253.2	HAVANA	gene	1,724,952	1,729,556	1,055	+	ENSG00000229187.1	unprocessed_pseudogene	MICC	2	OTTHUMG00000149210.1	null
974	GL000253.2	HAVANA	gene	1,776,687	1,778,229	1,267	+	ENSG00000233700.1	processed_pseudogene	TMPOP1	2	OTTHUMG00000149212.1	null
975	GL000253.2	HAVANA	gene	1,779,117	1,780,486	1,370	+	ENSG00000227754.3	processed_pseudogene	SUCLA2P1	2	OTTHUMG00000149200.1	null
976	GL000253.2	HAVANA	gene	1,796,175	1,796,825	651	+	ENSG00000224554.2	processed_pseudogene	RANP1	2	OTTHUMG00000149207.1	null
977	GL000253.2	HAVANA	gene	1,799,702	1,804,440	2,975	+	ENSG00000236632.5	protein_coding	HLA-E	2	OTTHUMG00000149205.1	null
978	GL000253.2	HAVANA	gene	1,826,487	1,829,438	851	+	ENSG00000235801.1	processed_transcript	LINC02569	2	OTTHUMG00000149304.1	null
979	GL000253.2	HAVANA	gene	1,851,606	1,867,403	8,646	-	ENSG00000232143.9	protein_coding	GNL1	2	OTTHUMG00000149306.2	null
980	GL000253.2	HAVANA	gene	1,867,115	1,873,952	4,281	+	ENSG00000223766.10	protein_coding	PRR3	2	OTTHUMG00000149307.1	null
981	GL000253.2	HAVANA	gene	1,881,605	1,907,409	4,338	+	ENSG00000231129.8	protein_coding	ABCF1	2	OTTHUMG00000149310.1	null
982	GL000253.2	HAVANA	gene	1,910,629	1,928,841	5,215	-	ENSG00000231737.7	protein_coding	PPP1R10	2	OTTHUMG00000149305.1	null
983	GL000253.2	HAVANA	gene	1,927,938	1,936,624	1,888	+	ENSG00000226111.8	protein_coding	MRPS18B	2	OTTHUMG00000149309.1	null
984	GL000253.2	HAVANA	gene	1,943,861	1,944,127	267	+	ENSG00000223851.4	processed_pseudogene	PTMAP1	2	OTTHUMG00000149308.1	overlapping_locus
985	GL000253.2	HAVANA	gene	1,937,071	1,957,052	4,035	+	ENSG00000235658.8	protein_coding	ATAT1	2	OTTHUMG00000149311.1	overlapping_locus
986	GL000253.2	HAVANA	gene	1,957,268	1,963,333	1,863	+	ENSG00000233164.9	protein_coding	C6orf136	2	OTTHUMG00000149209.1	null
987	GL000253.2	HAVANA	gene	1,963,343	1,983,290	4,008	-	ENSG00000233049.6	protein_coding	DHX16	2	OTTHUMG00000149223.2	null
988	GL000253.2	HAVANA	gene	1,986,642	1,998,148	4,599	-	ENSG00000229998.8	protein_coding	PPP1R18	2	OTTHUMG00000149220.1	null
989	GL000253.2	HAVANA	gene	1,998,300	2,001,673	2,045	-	ENSG00000228867.8	protein_coding	NRM	2	OTTHUMG00000149230.1	null
990	GL000253.2	HAVANA	gene	2,007,058	2,007,787	730	-	ENSG00000226494.1	processed_pseudogene	RPL7P4	2	OTTHUMG00000149227.1	null
991	GL000253.2	HAVANA	gene	2,013,319	2,023,435	738	+	ENSG00000224508.1	processed_transcript	MDC1-AS1	2	OTTHUMG00000149214.1	null
992	GL000253.2	HAVANA	gene	2,010,059	2,028,140	8,064	-	ENSG00000228575.9	protein_coding	MDC1	2	OTTHUMG00000149229.2	null
993	GL000253.2	HAVANA	gene	2,030,452	2,035,677	3,359	+	ENSG00000232575.10	protein_coding	TUBB	2	OTTHUMG00000149222.1	null
994	GL000253.2	HAVANA	gene	2,037,960	2,052,984	3,093	-	ENSG00000236271.8	protein_coding	FLOT1	2	OTTHUMG00000149221.4	fragmented_locus
995	GL000253.2	HAVANA	gene	2,053,450	2,054,805	1,356	-	ENSG00000230128.3	protein_coding	IER3	2	OTTHUMG00000149228.1	null
996	GL000253.2	ENSEMBL	gene	2,061,279	2,061,530	252	+	ENSG00000263671.2	misc_RNA	RF00017	3	null	null
997	GL000253.2	HAVANA	gene	2,077,067	2,102,492	1,371	+	ENSG00000228762.5	processed_transcript	HCG20	2	OTTHUMG00000149234.1	null
998	GL000253.2	HAVANA	gene	2,108,896	2,140,904	2,171	-	ENSG00000229170.6	processed_transcript	CR847861.1	2	OTTHUMG00000149218.1	null
999	GL000253.2	HAVANA	gene	2,149,770	2,158,404	799	-	ENSG00000231854.1	processed_transcript	LINC02570	2	OTTHUMG00000149226.1	null

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