Split (1)

train · 64.8k rows

Unnamed: 0 int64 0 64.8k	seqname stringlengths 4 10	source stringclasses 2 values	feature stringclasses 1 value	start int64 1 249M	end int64 107 249M	score float64 8 205k	strand stringclasses 2 values	gene_id stringlengths 17 24	gene_type stringlengths 3 34	gene_name stringlengths 2 25	level int64 1 3	havana_gene stringlengths 20 22 ⌀	tag stringclasses 25 values
300	GL000251.2	HAVANA	gene	1,421,497	1,422,489	993	-	ENSG00000223708.1	unprocessed_pseudogene	AL645935.1	2	OTTHUMG00000131004.1	null
301	GL000251.2	HAVANA	gene	1,435,984	1,437,958	771	+	ENSG00000232011.1	unprocessed_pseudogene	HLA-W	2	OTTHUMG00000031542.3	null
302	GL000251.2	HAVANA	gene	1,450,190	1,451,852	813	-	ENSG00000237395.1	unprocessed_pseudogene	MICD	2	OTTHUMG00000031352.2	null
303	GL000251.2	HAVANA	gene	1,454,489	1,457,785	660	+	ENSG00000236579.2	processed_transcript	HCG9	2	OTTHUMG00000031399.2	null
304	GL000251.2	HAVANA	gene	1,472,597	1,472,993	258	+	ENSG00000234242.1	unprocessed_pseudogene	DDX39BP2	2	OTTHUMG00000131001.1	null
305	GL000251.2	HAVANA	gene	1,473,825	1,474,702	335	-	ENSG00000235340.1	unprocessed_pseudogene	MCCD1P2	2	OTTHUMG00000130999.1	null
306	GL000251.2	HAVANA	gene	1,485,506	1,486,509	1,004	-	ENSG00000224006.1	unprocessed_pseudogene	AL645935.2	2	OTTHUMG00000131003.1	overlapping_locus
307	GL000251.2	HAVANA	gene	1,485,968	1,489,341	1,634	+	ENSG00000228220.7	transcribed_unprocessed_pseudogene	HLA-J	2	OTTHUMG00000031443.2	null
308	GL000251.2	HAVANA	gene	1,369,022	1,489,345	7,498	+	ENSG00000224320.9	protein_coding	HLA-A	2	OTTHUMG00000031434.2	null
309	GL000251.2	HAVANA	gene	1,511,448	1,512,738	984	+	ENSG00000232141.1	processed_pseudogene	ETF1P1	2	OTTHUMG00000031445.2	null
310	GL000251.2	ENSEMBL	gene	1,515,651	1,515,718	68	+	ENSG00000276049.1	misc_RNA	RF02218	3	null	null
311	GL000251.2	ENSEMBL	gene	1,537,892	1,537,967	76	+	ENSG00000274071.1	misc_RNA	RF02219	3	null	null
312	GL000251.2	ENSEMBL	gene	1,540,857	1,540,960	104	+	ENSG00000276034.1	misc_RNA	RF02220	3	null	null
313	GL000251.2	HAVANA	gene	1,480,399	1,541,417	19,549	-	ENSG00000229653.6	processed_transcript	ZNRD1ASP	2	OTTHUMG00000031389.3	overlapping_locus
314	GL000251.2	HAVANA	gene	1,538,676	1,544,680	3,672	+	ENSG00000224859.6	protein_coding	ZNRD1	2	OTTHUMG00000031431.3	ncRNA_host
315	GL000251.2	HAVANA	gene	1,546,480	1,550,104	2,538	+	ENSG00000234058.6	protein_coding	PPP1R11	2	OTTHUMG00000031558.4	null
316	GL000251.2	HAVANA	gene	1,550,037	1,555,658	2,206	-	ENSG00000227171.8	protein_coding	RNF39	2	OTTHUMG00000031586.2	null
317	GL000251.2	HAVANA	gene	1,582,690	1,592,905	3,537	-	ENSG00000226402.8	protein_coding	TRIM31	2	OTTHUMG00000031334.3	null
318	GL000251.2	HAVANA	gene	1,585,033	1,594,523	549	+	ENSG00000238027.1	processed_transcript	TRIM31-AS1	2	OTTHUMG00000131063.1	null
319	GL000251.2	ENSEMBL	gene	1,612,611	1,612,770	160	-	ENSG00000265495.1	snoRNA	RF00554	3	null	null
320	GL000251.2	HAVANA	gene	1,615,913	1,628,543	2,497	+	ENSG00000228001.8	protein_coding	TRIM40	2	OTTHUMG00000031353.2	null
321	GL000251.2	HAVANA	gene	1,631,753	1,640,740	3,546	-	ENSG00000237192.8	protein_coding	TRIM10	2	OTTHUMG00000031593.2	null
322	GL000251.2	HAVANA	gene	1,643,004	1,652,494	2,515	+	ENSG00000227147.9	protein_coding	TRIM15	2	OTTHUMG00000031301.3	null
323	GL000251.2	HAVANA	gene	1,666,578	1,668,398	1,203	-	ENSG00000228199.1	processed_pseudogene	PAIP1P1	2	OTTHUMG00000034811.2	overlapping_locus
324	GL000251.2	HAVANA	gene	1,664,235	1,693,198	4,378	-	ENSG00000230230.7	protein_coding	TRIM26	2	OTTHUMG00000031311.5	overlapping_locus
325	GL000251.2	HAVANA	gene	1,718,054	1,722,043	768	+	ENSG00000223840.1	unprocessed_pseudogene	TRIM26BP	2	OTTHUMG00000031581.2	null
326	GL000251.2	HAVANA	gene	1,739,364	1,746,646	4,774	+	ENSG00000243492.6	transcribed_unprocessed_pseudogene	HLA-L	2	OTTHUMG00000031446.2	null
327	GL000251.2	HAVANA	gene	1,713,805	1,805,811	759	-	ENSG00000241701.5	processed_transcript	HCG17	2	OTTHUMG00000031394.2	overlapping_locus
328	GL000251.2	HAVANA	gene	1,770,488	1,806,827	5,633	-	ENSG00000228894.6	processed_transcript	HCG18	2	OTTHUMG00000031418.5	overlapping_locus
329	GL000251.2	HAVANA	gene	1,806,156	1,823,410	4,226	+	ENSG00000224994.10	protein_coding	TRIM39	2	OTTHUMG00000031336.4	null
330	GL000251.2	HAVANA	gene	1,808,989	1,826,565	2,717	+	ENSG00000241863.6	protein_coding	RPP21	2	OTTHUMG00000031520.3	null
331	GL000251.2	HAVANA	gene	1,831,097	1,831,231	135	+	ENSG00000227334.1	unprocessed_pseudogene	HLA-N	2	OTTHUMG00000031449.2	null
332	GL000251.2	HAVANA	gene	1,838,958	1,839,591	634	-	ENSG00000234417.1	processed_pseudogene	AL662831.1	2	OTTHUMG00000031327.3	null
333	GL000251.2	HAVANA	gene	1,842,802	1,843,970	1,169	-	ENSG00000232095.1	processed_pseudogene	UBQLN1P1	2	OTTHUMG00000031414.2	null
334	GL000251.2	HAVANA	gene	1,894,398	1,899,003	1,055	+	ENSG00000233466.1	unprocessed_pseudogene	MICC	2	OTTHUMG00000031348.3	null
335	GL000251.2	HAVANA	gene	1,946,252	1,947,779	1,267	+	ENSG00000223933.1	processed_pseudogene	TMPOP1	2	OTTHUMG00000031518.2	null
336	GL000251.2	HAVANA	gene	1,948,620	1,949,989	1,370	+	ENSG00000223412.3	processed_pseudogene	SUCLA2P1	2	OTTHUMG00000031426.2	null
337	GL000251.2	HAVANA	gene	1,965,676	1,966,326	651	+	ENSG00000227703.4	processed_pseudogene	RANP1	2	OTTHUMG00000031423.1	null
338	GL000251.2	HAVANA	gene	1,969,202	1,973,940	2,975	+	ENSG00000233904.6	protein_coding	HLA-E	2	OTTHUMG00000031437.3	null
339	GL000251.2	HAVANA	gene	1,995,989	1,998,943	851	+	ENSG00000223827.1	processed_transcript	LINC02569	2	OTTHUMG00000132955.1	null
340	GL000251.2	HAVANA	gene	2,021,096	2,036,894	8,646	-	ENSG00000235986.9	protein_coding	GNL1	2	OTTHUMG00000031417.4	null
341	GL000251.2	HAVANA	gene	2,036,606	2,043,443	4,281	+	ENSG00000228186.10	protein_coding	PRR3	2	OTTHUMG00000031307.3	null
342	GL000251.2	HAVANA	gene	2,051,098	2,076,903	4,340	+	ENSG00000236149.9	protein_coding	ABCF1	2	OTTHUMG00000031364.3	null
343	GL000251.2	HAVANA	gene	2,080,124	2,098,336	5,215	-	ENSG00000230995.7	protein_coding	PPP1R10	2	OTTHUMG00000031557.3	null
344	GL000251.2	HAVANA	gene	2,097,433	2,106,119	1,888	+	ENSG00000227420.8	protein_coding	MRPS18B	2	OTTHUMG00000031566.3	null
345	GL000251.2	HAVANA	gene	2,113,355	2,113,621	267	+	ENSG00000225453.4	processed_pseudogene	PTMAP1	2	OTTHUMG00000031535.3	overlapping_locus
346	GL000251.2	HAVANA	gene	2,106,566	2,126,545	4,035	+	ENSG00000223752.8	protein_coding	ATAT1	2	OTTHUMG00000031519.3	overlapping_locus
347	GL000251.2	HAVANA	gene	2,126,761	2,132,823	1,863	+	ENSG00000233641.9	protein_coding	C6orf136	2	OTTHUMG00000031521.4	null
348	GL000251.2	HAVANA	gene	2,132,833	2,152,781	4,008	-	ENSG00000233561.6	protein_coding	DHX16	2	OTTHUMG00000031330.4	null
349	GL000251.2	HAVANA	gene	2,156,133	2,167,639	4,599	-	ENSG00000231247.8	protein_coding	PPP1R18	2	OTTHUMG00000031537.3	null
350	GL000251.2	HAVANA	gene	2,167,791	2,171,164	2,045	-	ENSG00000235773.8	protein_coding	NRM	2	OTTHUMG00000031523.3	null
351	GL000251.2	HAVANA	gene	2,176,548	2,177,277	730	-	ENSG00000235342.1	processed_pseudogene	RPL7P4	2	OTTHUMG00000031554.2	null
352	GL000251.2	HAVANA	gene	2,182,808	2,192,924	738	+	ENSG00000236766.1	processed_transcript	MDC1-AS1	2	OTTHUMG00000133708.1	null
353	GL000251.2	HAVANA	gene	2,179,547	2,197,629	8,064	-	ENSG00000224587.9	protein_coding	MDC1	2	OTTHUMG00000031345.5	null
354	GL000251.2	HAVANA	gene	2,199,940	2,205,165	3,359	+	ENSG00000227739.10	protein_coding	TUBB	2	OTTHUMG00000031329.3	null
355	GL000251.2	ENSEMBL	gene	2,216,039	2,216,149	111	-	ENSG00000266119.1	misc_RNA	RF00019	3	null	null
356	GL000251.2	HAVANA	gene	2,207,446	2,222,473	3,186	-	ENSG00000232280.9	protein_coding	FLOT1	2	OTTHUMG00000031433.5	ncRNA_host
357	GL000251.2	HAVANA	gene	2,222,939	2,224,294	1,356	-	ENSG00000237155.3	protein_coding	IER3	2	OTTHUMG00000031563.2	null
358	GL000251.2	ENSEMBL	gene	2,230,744	2,230,995	252	+	ENSG00000263728.2	misc_RNA	RF00017	3	null	null
359	GL000251.2	HAVANA	gene	2,246,539	2,271,967	1,369	+	ENSG00000224641.5	processed_transcript	HCG20	2	OTTHUMG00000031492.2	null
360	GL000251.2	HAVANA	gene	2,278,378	2,310,390	2,171	-	ENSG00000236006.5	processed_transcript	AL662848.1	2	OTTHUMG00000031539.2	null
361	GL000251.2	HAVANA	gene	2,319,260	2,327,898	795	-	ENSG00000231522.1	processed_transcript	LINC02570	2	OTTHUMG00000133711.1	null
362	GL000251.2	ENSEMBL	gene	2,343,998	2,344,300	303	+	ENSG00000265903.1	misc_RNA	RF00100	3	null	null
363	GL000251.2	HAVANA	gene	2,346,729	2,355,691	3,991	-	ENSG00000224360.1	processed_transcript	DDR1-DT	2	OTTHUMG00000031529.3	null
364	GL000251.2	HAVANA	gene	2,360,744	2,379,927	5,689	+	ENSG00000137332.19	protein_coding	DDR1	2	OTTHUMG00000031536.6	null
365	GL000251.2	HAVANA	gene	2,387,930	2,393,852	2,353	+	ENSG00000236895.10	protein_coding	GTF2H4	2	OTTHUMG00000031313.4	overlapping_locus
366	GL000251.2	ENSEMBL	gene	2,393,951	2,406,054	4,070	+	ENSG00000285224.1	protein_coding	VARS2	3	null	null
367	GL000251.2	HAVANA	gene	2,387,988	2,406,057	8,422	+	ENSG00000236178.10	protein_coding	VARS2	2	OTTHUMG00000031561.4	overlapping_locus
368	GL000251.2	HAVANA	gene	2,410,947	2,411,769	691	-	ENSG00000224246.2	protein_coding	SFTA2	2	OTTHUMG00000031483.3	null
369	GL000251.2	ENSEMBL	gene	2,412,213	2,412,301	89	-	ENSG00000266178.1	misc_RNA	RF00019	3	null	null
370	GL000251.2	HAVANA	gene	2,420,584	2,433,795	3,573	+	ENSG00000232308.4	protein_coding	MUCL3	2	OTTHUMG00000031385.2	null
371	GL000251.2	HAVANA	gene	2,425,554	2,434,436	605	-	ENSG00000223454.1	processed_transcript	HCG21	2	OTTHUMG00000031482.1	null
372	GL000251.2	HAVANA	gene	2,463,289	2,469,484	3,793	+	ENSG00000234137.5	protein_coding	MUC21	2	OTTHUMG00000031516.3	null
373	GL000251.2	HAVANA	gene	2,490,065	2,515,096	6,019	+	ENSG00000234063.5	processed_transcript	AL663093.1	2	OTTHUMG00000133710.1	null
374	GL000251.2	HAVANA	gene	2,535,827	2,542,268	2,184	+	ENSG00000238234.6	transcribed_unprocessed_pseudogene	HCG22	2	OTTHUMG00000031470.6	null
375	GL000251.2	ENSEMBL	gene	2,565,385	2,565,484	100	+	ENSG00000265921.1	snRNA	RF00026	3	null	null
376	GL000251.2	HAVANA	gene	2,593,598	2,594,934	1,140	-	ENSG00000229432.2	protein_coding	C6orf15	2	OTTHUMG00000031391.2	null
377	GL000251.2	HAVANA	gene	2,597,465	2,602,822	2,549	-	ENSG00000137197.6	protein_coding	CDSN	2	OTTHUMG00000031432.2	null
378	GL000251.2	HAVANA	gene	2,619,927	2,621,743	1,152	-	ENSG00000224544.2	protein_coding	PSORS1C2	2	OTTHUMG00000031351.2	null
379	GL000251.2	HAVANA	gene	2,597,125	2,622,431	4,627	+	ENSG00000235487.8	protein_coding	PSORS1C1	2	OTTHUMG00000031347.4	null
380	GL000251.2	HAVANA	gene	2,623,117	2,623,303	187	+	ENSG00000226993.1	processed_pseudogene	POLR2LP1	2	OTTHUMG00000031549.2	null
381	GL000251.2	HAVANA	gene	2,624,870	2,640,641	4,556	-	ENSG00000234114.8	protein_coding	CCHCR1	2	OTTHUMG00000149972.4	null
382	GL000251.2	HAVANA	gene	2,640,970	2,646,639	3,291	+	ENSG00000224379.6	protein_coding	TCF19	2	OTTHUMG00000031572.3	null
383	GL000251.2	HAVANA	gene	2,646,761	2,653,135	1,880	-	ENSG00000233911.9	protein_coding	POU5F1	2	OTTHUMG00000031507.4	null
384	GL000251.2	HAVANA	gene	2,656,176	2,660,341	593	-	ENSG00000223364.1	processed_transcript	PSORS1C3	2	OTTHUMG00000031324.4	null
385	GL000251.2	HAVANA	gene	2,682,609	2,684,361	516	-	ENSG00000228583.1	processed_transcript	AL662833.2	2	OTTHUMG00000133715.1	null
386	GL000251.2	HAVANA	gene	2,680,204	2,686,408	1,804	+	ENSG00000232758.1	processed_transcript	HCG27	2	OTTHUMG00000031548.3	null
387	GL000251.2	HAVANA	gene	2,749,675	2,753,056	2,576	-	ENSG00000233841.11	protein_coding	HLA-C	2	OTTHUMG00000031436.7	null
388	GL000251.2	HAVANA	gene	2,756,493	2,759,664	3,172	+	ENSG00000233486.3	processed_pseudogene	USP8P1	2	OTTHUMG00000031317.2	null
389	GL000251.2	HAVANA	gene	2,761,227	2,762,429	1,203	+	ENSG00000228461.1	processed_pseudogene	RPL3P2	2	OTTHUMG00000031305.2	null
390	GL000251.2	HAVANA	gene	2,768,421	2,769,875	1,455	-	ENSG00000231433.1	processed_pseudogene	WASF5P	2	OTTHUMG00000031564.2	null
391	GL000251.2	HAVANA	gene	2,788,725	2,789,459	306	-	ENSG00000225939.1	unprocessed_pseudogene	AL662833.1	2	OTTHUMG00000133755.1	null
392	GL000251.2	HAVANA	gene	2,750,417	2,837,604	2,743	-	ENSG00000223532.10	protein_coding	HLA-B	2	OTTHUMG00000031435.5	null
393	GL000251.2	HAVANA	gene	2,846,706	2,847,252	547	-	ENSG00000230016.1	processed_pseudogene	DHFRP2	2	OTTHUMG00000031393.2	null
394	GL000251.2	ENSEMBL	gene	2,850,470	2,850,576	107	+	ENSG00000264185.1	snRNA	RF00026	3	null	null
395	GL000251.2	HAVANA	gene	2,857,747	2,858,349	603	+	ENSG00000223971.1	processed_pseudogene	AL669854.1	2	OTTHUMG00000031534.2	null
396	GL000251.2	HAVANA	gene	2,860,752	2,861,178	427	+	ENSG00000232659.1	processed_pseudogene	ZDHHC20P2	2	OTTHUMG00000133762.1	null
397	GL000251.2	HAVANA	gene	2,862,422	2,862,636	53	-	ENSG00000225145.1	unprocessed_pseudogene	HLA-S	2	OTTHUMG00000031469.2	null
398	GL000251.2	ENSEMBL	gene	2,882,522	2,882,620	99	-	ENSG00000264692.1	misc_RNA	RF00019	3	null	null
399	GL000251.2	HAVANA	gene	2,880,151	2,896,610	3,853	+	ENSG00000233051.9	protein_coding	MICA	2	OTTHUMG00000031343.4	null

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