Unnamed: 0 int64 0 64.8k | seqname stringlengths 4 10 | source stringclasses 2 values | feature stringclasses 1 value | start int64 1 249M | end int64 107 249M | score float64 8 205k | strand stringclasses 2 values | frame int64 0 0 | gene_id stringlengths 17 24 | gene_type stringlengths 3 34 | gene_name stringlengths 2 25 | level int64 1 3 | havana_gene stringlengths 20 22 ⌀ | tag stringclasses 25 values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
400 | GL000251.2 | HAVANA | gene | 2,921,972 | 2,927,272 | 2,138 | + | 0 | ENSG00000234858.1 | processed_transcript | LINC01149 | 2 | OTTHUMG00000133761.1 | null |
401 | GL000251.2 | HAVANA | gene | 2,940,500 | 2,943,134 | 2,544 | + | 0 | ENSG00000237105.2 | processed_transcript | HCP5 | 2 | OTTHUMG00000031580.2 | null |
402 | GL000251.2 | ENSEMBL | gene | 2,974,031 | 2,974,132 | 102 | - | 0 | ENSG00000264846.1 | misc_RNA | RF00019 | 3 | null | null |
403 | GL000251.2 | HAVANA | gene | 2,975,426 | 2,988,464 | 2,681 | + | 0 | ENSG00000234218.9 | protein_coding | MICB | 2 | OTTHUMG00000031344.3 | null |
404 | GL000251.2 | HAVANA | gene | 2,996,824 | 2,997,635 | 498 | - | 0 | ENSG00000236415.4 | processed_pseudogene | PPIAP9 | 2 | OTTHUMG00000031589.2 | null |
405 | GL000251.2 | HAVANA | gene | 3,005,447 | 3,006,026 | 580 | + | 0 | ENSG00000230211.1 | processed_pseudogene | RPL15P4 | 2 | OTTHUMG00000031402.2 | null |
406 | GL000251.2 | HAVANA | gene | 3,006,050 | 3,007,565 | 955 | + | 0 | ENSG00000226923.2 | protein_coding | MCCD1 | 2 | OTTHUMG00000134330.1 | null |
407 | GL000251.2 | ENSEMBL | gene | 3,013,707 | 3,013,782 | 76 | - | 0 | ENSG00000263359.1 | snoRNA | SNORD117 | 3 | null | null |
408 | GL000251.2 | ENSEMBL | gene | 3,018,431 | 3,018,508 | 78 | - | 0 | ENSG00000265607.1 | snoRNA | SNORD84 | 3 | null | null |
409 | GL000251.2 | HAVANA | gene | 3,019,634 | 3,020,468 | 527 | + | 0 | ENSG00000232256.1 | processed_transcript | DDX39B-AS1 | 2 | OTTHUMG00000134329.1 | null |
410 | GL000251.2 | HAVANA | gene | 3,007,552 | 3,023,908 | 6,891 | - | 0 | ENSG00000225073.10 | protein_coding | DDX39B | 2 | OTTHUMG00000031447.6 | ncRNA_host,overlapping_locus |
411 | GL000251.2 | HAVANA | gene | 3,021,792 | 3,024,174 | 1,652 | - | 0 | ENSG00000227587.2 | protein_coding | ATP6V1G2 | 2 | OTTHUMG00000031501.3 | overlapping_locus |
412 | GL000251.2 | HAVANA | gene | 3,024,196 | 3,036,142 | 1,779 | + | 0 | ENSG00000234530.8 | protein_coding | NFKBIL1 | 2 | OTTHUMG00000031308.5 | null |
413 | GL000251.2 | HAVANA | gene | 3,049,341 | 3,051,611 | 1,737 | + | 0 | ENSG00000238130.8 | protein_coding | LTA | 2 | OTTHUMG00000031415.3 | null |
414 | GL000251.2 | HAVANA | gene | 3,052,854 | 3,055,623 | 1,676 | + | 0 | ENSG00000204490.3 | protein_coding | TNF | 2 | OTTHUMG00000031493.2 | null |
415 | GL000251.2 | HAVANA | gene | 3,057,842 | 3,059,809 | 926 | - | 0 | ENSG00000204487.8 | protein_coding | LTB | 2 | OTTHUMG00000031416.3 | null |
416 | GL000251.2 | HAVANA | gene | 3,063,411 | 3,066,192 | 2,290 | + | 0 | ENSG00000226182.8 | protein_coding | LST1 | 2 | OTTHUMG00000031562.4 | null |
417 | GL000251.2 | HAVANA | gene | 3,066,178 | 3,070,268 | 1,211 | - | 0 | ENSG00000237808.6 | protein_coding | NCR3 | 2 | OTTHUMG00000031403.4 | null |
418 | GL000251.2 | HAVANA | gene | 3,088,372 | 3,088,645 | 274 | - | 0 | ENSG00000227650.1 | processed_pseudogene | UQCRHP1 | 2 | OTTHUMG00000031588.3 | null |
419 | GL000251.2 | HAVANA | gene | 3,092,473 | 3,094,310 | 1,320 | + | 0 | ENSG00000237727.7 | protein_coding | AIF1 | 2 | OTTHUMG00000031546.3 | null |
420 | GL000251.2 | ENSEMBL | gene | 3,100,364 | 3,100,495 | 132 | + | 0 | ENSG00000263879.1 | snoRNA | SNORA38 | 3 | null | null |
421 | GL000251.2 | HAVANA | gene | 3,098,008 | 3,115,058 | 9,115 | + | 0 | ENSG00000225164.9 | protein_coding | PRRC2A | 2 | OTTHUMG00000031450.3 | ncRNA_host |
422 | GL000251.2 | HAVANA | gene | 3,116,310 | 3,129,995 | 5,336 | - | 0 | ENSG00000229524.10 | protein_coding | BAG6 | 2 | OTTHUMG00000031455.5 | null |
423 | GL000251.2 | HAVANA | gene | 3,129,706 | 3,135,499 | 1,237 | + | 0 | ENSG00000224290.7 | protein_coding | APOM | 2 | OTTHUMG00000031550.3 | null |
424 | GL000251.2 | HAVANA | gene | 3,135,618 | 3,138,009 | 671 | + | 0 | ENSG00000235516.1 | processed_transcript | C6orf47-AS1 | 2 | OTTHUMG00000057531.1 | null |
425 | GL000251.2 | HAVANA | gene | 3,135,587 | 3,138,059 | 2,473 | - | 0 | ENSG00000235360.2 | protein_coding | C6orf47 | 2 | OTTHUMG00000031463.2 | null |
426 | GL000251.2 | ENSEMBL | gene | 3,140,579 | 3,140,692 | 114 | + | 0 | ENSG00000266759.1 | misc_RNA | RF00019 | 3 | null | null |
427 | GL000251.2 | HAVANA | gene | 3,138,519 | 3,143,574 | 3,528 | - | 0 | ENSG00000236011.6 | protein_coding | GPANK1 | 2 | OTTHUMG00000031465.6 | null |
428 | GL000251.2 | HAVANA | gene | 3,146,409 | 3,150,837 | 2,644 | + | 0 | ENSG00000241713.7 | protein_coding | LY6G5B | 2 | OTTHUMG00000031527.3 | overlapping_locus |
429 | GL000251.2 | HAVANA | gene | 3,142,527 | 3,150,837 | 4,549 | + | 0 | ENSG00000228875.8 | protein_coding | CSNK2B | 2 | OTTHUMG00000031326.4 | overlapping_locus |
430 | GL000251.2 | HAVANA | gene | 3,153,975 | 3,161,330 | 2,828 | - | 0 | ENSG00000231325.9 | protein_coding | LY6G5C | 2 | OTTHUMG00000031528.4 | null |
431 | GL000251.2 | HAVANA | gene | 3,164,239 | 3,180,705 | 3,850 | - | 0 | ENSG00000235676.9 | protein_coding | ABHD16A | 2 | OTTHUMG00000031468.4 | null |
432 | GL000251.2 | HAVANA | gene | 3,184,175 | 3,187,885 | 920 | + | 0 | ENSG00000240008.1 | protein_coding | LY6G6F | 2 | OTTHUMG00000137420.1 | overlapping_locus |
433 | GL000251.2 | HAVANA | gene | 3,189,620 | 3,191,096 | 506 | - | 0 | ENSG00000224708.8 | protein_coding | LY6G6E | 2 | OTTHUMG00000031553.2 | null |
434 | GL000251.2 | HAVANA | gene | 3,184,194 | 3,195,206 | 1,533 | + | 0 | ENSG00000226603.8 | protein_coding | LY6G6D | 2 | OTTHUMG00000031552.3 | overlapping_locus |
435 | GL000251.2 | HAVANA | gene | 3,195,936 | 3,199,133 | 1,103 | - | 0 | ENSG00000236183.2 | protein_coding | LY6G6C | 2 | OTTHUMG00000031551.3 | null |
436 | GL000251.2 | HAVANA | gene | 3,195,882 | 3,203,998 | 2,860 | + | 0 | ENSG00000230060.6 | protein_coding | MPIG6B | 2 | OTTHUMG00000031410.3 | null |
437 | GL000251.2 | HAVANA | gene | 3,204,326 | 3,207,905 | 2,538 | - | 0 | ENSG00000226634.6 | protein_coding | DDAH2 | 2 | OTTHUMG00000031512.4 | overlapping_locus |
438 | GL000251.2 | HAVANA | gene | 3,207,869 | 3,217,043 | 1,942 | - | 0 | ENSG00000230685.6 | protein_coding | CLIC1 | 2 | OTTHUMG00000031384.3 | overlapping_locus |
439 | GL000251.2 | ENSEMBL | gene | 3,234,208 | 3,234,310 | 103 | - | 0 | ENSG00000265409.1 | snRNA | RF00026 | 3 | null | null |
440 | GL000251.2 | HAVANA | gene | 3,217,271 | 3,239,933 | 5,344 | + | 0 | ENSG00000235222.12 | protein_coding | MSH5 | 2 | OTTHUMG00000166643.2 | overlapping_locus |
441 | GL000251.2 | HAVANA | gene | 3,217,300 | 3,242,109 | 4,141 | + | 0 | ENSG00000254405.10 | protein_coding | MSH5-SAPCD1 | 2 | OTTHUMG00000031419.5 | overlapping_locus |
442 | GL000251.2 | HAVANA | gene | 3,240,056 | 3,242,109 | 1,558 | + | 0 | ENSG00000229176.11 | protein_coding | SAPCD1 | 2 | OTTHUMG00000031411.2 | overlapping_locus |
443 | GL000251.2 | HAVANA | gene | 3,241,567 | 3,242,846 | 461 | - | 0 | ENSG00000238017.1 | processed_transcript | SAPCD1-AS1 | 2 | OTTHUMG00000137424.1 | null |
444 | GL000251.2 | HAVANA | gene | 3,242,848 | 3,254,536 | 3,638 | - | 0 | ENSG00000227144.8 | protein_coding | VWA7 | 2 | OTTHUMG00000031412.3 | null |
445 | GL000251.2 | ENSEMBL | gene | 3,256,059 | 3,256,147 | 89 | - | 0 | ENSG00000264955.1 | misc_RNA | RF00019 | 3 | null | null |
446 | GL000251.2 | HAVANA | gene | 3,254,760 | 3,273,193 | 6,081 | - | 0 | ENSG00000226589.9 | protein_coding | VARS | 2 | OTTHUMG00000031584.5 | ncRNA_host |
447 | GL000251.2 | HAVANA | gene | 3,274,635 | 3,284,226 | 1,119 | - | 0 | ENSG00000236826.7 | protein_coding | LSM2 | 2 | OTTHUMG00000031401.3 | null |
448 | GL000251.2 | HAVANA | gene | 3,286,871 | 3,292,316 | 2,544 | - | 0 | ENSG00000236251.6 | protein_coding | HSPA1L | 2 | OTTHUMG00000031509.2 | null |
449 | GL000251.2 | HAVANA | gene | 3,292,715 | 3,295,197 | 2,483 | + | 0 | ENSG00000237724.5 | protein_coding | HSPA1A | 2 | OTTHUMG00000031502.2 | null |
450 | GL000251.2 | HAVANA | gene | 3,304,988 | 3,307,511 | 2,524 | + | 0 | ENSG00000224501.5 | protein_coding | HSPA1B | 2 | OTTHUMG00000031503.2 | null |
451 | GL000251.2 | ENSEMBL | gene | 3,312,510 | 3,312,572 | 63 | + | 0 | ENSG00000264202.1 | snoRNA | SNORD48 | 3 | null | null |
452 | GL000251.2 | ENSEMBL | gene | 3,314,321 | 3,314,387 | 67 | + | 0 | ENSG00000263362.1 | snoRNA | SNORD52 | 3 | null | null |
453 | GL000251.2 | HAVANA | gene | 3,311,855 | 3,317,010 | 1,803 | + | 0 | ENSG00000226710.9 | protein_coding | C6orf48 | 2 | OTTHUMG00000031466.3 | ncRNA_host |
454 | GL000251.2 | HAVANA | gene | 3,335,076 | 3,340,324 | 4,823 | - | 0 | ENSG00000227315.7 | protein_coding | NEU1 | 2 | OTTHUMG00000031582.3 | null |
455 | GL000251.2 | HAVANA | gene | 3,340,610 | 3,356,471 | 3,369 | - | 0 | ENSG00000231479.8 | protein_coding | SLC44A4 | 2 | OTTHUMG00000031413.4 | null |
456 | GL000251.2 | HAVANA | gene | 3,361,186 | 3,361,479 | 223 | + | 0 | ENSG00000223557.1 | processed_transcript | AL662834.1 | 2 | OTTHUMG00000057537.1 | null |
457 | GL000251.2 | HAVANA | gene | 3,357,184 | 3,375,112 | 7,268 | - | 0 | ENSG00000236759.7 | protein_coding | EHMT2 | 2 | OTTHUMG00000031471.5 | null |
458 | GL000251.2 | HAVANA | gene | 3,377,032 | 3,379,417 | 1,875 | - | 0 | ENSG00000237900.2 | protein_coding | ZBTB12 | 2 | OTTHUMG00000031452.2 | null |
459 | GL000251.2 | HAVANA | gene | 3,411,876 | 3,419,151 | 787 | - | 0 | ENSG00000227884.1 | processed_transcript | C4B-AS1 | 2 | OTTHUMG00000137478.1 | null |
460 | GL000251.2 | HAVANA | gene | 3,375,210 | 3,423,101 | 5,542 | + | 0 | ENSG00000235017.9 | protein_coding | C2 | 2 | OTTHUMG00000031489.4 | overlapping_locus |
461 | GL000251.2 | HAVANA | gene | 3,423,077 | 3,429,511 | 4,538 | + | 0 | ENSG00000239754.9 | protein_coding | CFB | 2 | OTTHUMG00000031499.4 | overlapping_locus |
462 | GL000251.2 | HAVANA | gene | 3,429,514 | 3,436,519 | 2,701 | - | 0 | ENSG00000231044.10 | protein_coding | NELFE | 2 | OTTHUMG00000031316.4 | null |
463 | GL000251.2 | HAVANA | gene | 3,436,507 | 3,447,178 | 5,561 | + | 0 | ENSG00000225737.9 | protein_coding | SKIV2L | 2 | OTTHUMG00000031427.3 | null |
464 | GL000251.2 | HAVANA | gene | 3,447,237 | 3,449,719 | 2,483 | - | 0 | ENSG00000225682.6 | protein_coding | DXO | 2 | OTTHUMG00000031570.3 | null |
465 | GL000251.2 | HAVANA | gene | 3,448,602 | 3,458,873 | 3,546 | + | 0 | ENSG00000234947.8 | protein_coding | STK19 | 2 | OTTHUMG00000031531.4 | null |
466 | GL000251.2 | HAVANA | gene | 3,459,451 | 3,473,740 | 6,919 | + | 0 | ENSG00000228267.8 | protein_coding | C4B | 2 | OTTHUMG00000031486.3 | null |
467 | GL000251.2 | HAVANA | gene | 3,471,051 | 3,474,580 | 2,079 | - | 0 | ENSG00000236587.1 | processed_transcript | AL662849.1 | 2 | OTTHUMG00000137633.2 | null |
468 | GL000251.2 | HAVANA | gene | 3,476,620 | 3,479,992 | 2,637 | + | 0 | ENSG00000233151.6 | protein_coding | CYP21A2 | 2 | OTTHUMG00000031339.3 | null |
469 | GL000251.2 | ENSEMBL | gene | 3,516,846 | 3,516,966 | 121 | - | 0 | ENSG00000265816.1 | rRNA | RF00001 | 3 | null | null |
470 | GL000251.2 | HAVANA | gene | 3,479,477 | 3,555,943 | 15,205 | - | 0 | ENSG00000233323.10 | protein_coding | TNXB | 2 | OTTHUMG00000031358.5 | ncRNA_host,overlapping_locus |
471 | GL000251.2 | HAVANA | gene | 3,553,597 | 3,566,584 | 3,629 | - | 0 | ENSG00000234539.9 | protein_coding | ATF6B | 2 | OTTHUMG00000031594.4 | overlapping_locus |
472 | GL000251.2 | HAVANA | gene | 3,567,038 | 3,568,622 | 1,345 | - | 0 | ENSG00000230907.2 | protein_coding | FKBPL | 2 | OTTHUMG00000031409.2 | null |
473 | GL000251.2 | HAVANA | gene | 3,586,696 | 3,592,712 | 4,262 | - | 0 | ENSG00000229071.9 | protein_coding | PRRT1 | 2 | OTTHUMG00000031425.4 | null |
474 | GL000251.2 | HAVANA | gene | 3,591,780 | 3,602,032 | 2,927 | + | 0 | ENSG00000206256.14 | protein_coding | PPT2 | 2 | OTTHUMG00000166644.2 | overlapping_locus |
475 | GL000251.2 | HAVANA | gene | 3,602,935 | 3,606,633 | 2,621 | + | 0 | ENSG00000242038.5 | protein_coding | EGFL8 | 2 | OTTHUMG00000031522.4 | overlapping_locus |
476 | GL000251.2 | HAVANA | gene | 3,592,184 | 3,610,330 | 5,389 | + | 0 | ENSG00000254778.7 | protein_coding | PPT2-EGFL8 | 2 | OTTHUMG00000031555.7 | overlapping_locus |
477 | GL000251.2 | HAVANA | gene | 3,606,564 | 3,616,448 | 3,631 | - | 0 | ENSG00000226467.9 | protein_coding | AGPAT1 | 2 | OTTHUMG00000031510.3 | null |
478 | GL000251.2 | HAVANA | gene | 3,616,712 | 3,619,145 | 1,172 | + | 0 | ENSG00000228405.5 | protein_coding | RNF5 | 2 | OTTHUMG00000031363.2 | null |
479 | GL000251.2 | HAVANA | gene | 3,619,320 | 3,622,676 | 2,077 | - | 0 | ENSG00000234729.9 | protein_coding | AGER | 2 | OTTHUMG00000031400.4 | null |
480 | GL000251.2 | HAVANA | gene | 3,623,085 | 3,628,535 | 4,349 | - | 0 | ENSG00000237344.7 | protein_coding | PBX2 | 2 | OTTHUMG00000031396.3 | null |
481 | GL000251.2 | HAVANA | gene | 3,629,115 | 3,633,872 | 1,854 | - | 0 | ENSG00000233490.7 | protein_coding | GPSM3 | 2 | OTTHUMG00000031544.4 | overlapping_locus |
482 | GL000251.2 | HAVANA | gene | 3,633,192 | 3,662,414 | 9,754 | - | 0 | ENSG00000235396.5 | protein_coding | NOTCH4 | 2 | OTTHUMG00000031314.3 | overlapping_locus |
483 | GL000251.2 | HAVANA | gene | 3,763,695 | 3,764,654 | 960 | + | 0 | ENSG00000231275.1 | processed_pseudogene | HNRNPA1P2 | 2 | OTTHUMG00000031592.2 | null |
484 | GL000251.2 | ENSEMBL | gene | 3,790,999 | 3,791,105 | 107 | + | 0 | ENSG00000263869.1 | snRNA | RF00026 | 3 | null | null |
485 | GL000251.2 | HAVANA | gene | 3,731,147 | 3,810,038 | 2,242 | - | 0 | ENSG00000234280.6 | protein_coding | C6orf10 | 2 | OTTHUMG00000031387.2 | null |
486 | GL000251.2 | HAVANA | gene | 3,828,610 | 3,831,778 | 610 | + | 0 | ENSG00000225834.1 | processed_transcript | HCG23 | 2 | OTTHUMG00000031517.2 | null |
487 | GL000251.2 | HAVANA | gene | 3,832,055 | 3,845,208 | 1,470 | - | 0 | ENSG00000224770.7 | protein_coding | BTNL2 | 2 | OTTHUMG00000031383.4 | null |
488 | GL000251.2 | HAVANA | gene | 3,877,968 | 3,883,135 | 1,280 | + | 0 | ENSG00000227993.9 | protein_coding | HLA-DRA | 2 | OTTHUMG00000031567.3 | null |
489 | GL000251.2 | HAVANA | gene | 3,897,901 | 3,911,599 | 343 | - | 0 | ENSG00000227526.4 | unprocessed_pseudogene | HLA-DRB9 | 2 | OTTHUMG00000031498.5 | null |
490 | GL000251.2 | ENSEMBL | gene | 3,931,432 | 3,931,580 | 149 | - | 0 | ENSG00000265223.1 | snRNA | RNU1-79P | 3 | null | null |
491 | GL000251.2 | HAVANA | gene | 3,934,009 | 3,947,126 | 1,207 | - | 0 | ENSG00000231679.7 | protein_coding | HLA-DRB3 | 2 | OTTHUMG00000031497.2 | null |
492 | GL000251.2 | ENSEMBL | gene | 3,969,622 | 3,969,768 | 147 | - | 0 | ENSG00000264909.1 | snRNA | RF00003 | 3 | null | null |
493 | GL000251.2 | HAVANA | gene | 3,973,045 | 3,987,586 | 503 | - | 0 | ENSG00000232156.1 | unprocessed_pseudogene | AL662842.1 | 2 | OTTHUMG00000031496.2 | null |
494 | GL000251.2 | ENSEMBL | gene | 3,995,582 | 3,995,728 | 147 | - | 0 | ENSG00000264259.1 | snRNA | RNU1-116P | 3 | null | null |
495 | GL000251.2 | HAVANA | gene | 3,998,045 | 4,028,652 | 1,431 | - | 0 | ENSG00000206240.11 | protein_coding | HLA-DRB1 | 2 | OTTHUMG00000031495.3 | null |
496 | GL000251.2 | HAVANA | gene | 4,072,821 | 4,073,670 | 551 | + | 0 | ENSG00000231677.1 | processed_transcript | HLA-DQB1-AS1 | 2 | OTTHUMG00000140107.1 | null |
497 | GL000251.2 | HAVANA | gene | 4,072,827 | 4,075,422 | 310 | - | 0 | ENSG00000243252.1 | processed_transcript | AL731683.2 | 2 | OTTHUMG00000140108.1 | overlapping_locus |
498 | GL000251.2 | HAVANA | gene | 4,072,371 | 4,079,982 | 1,649 | - | 0 | ENSG00000206237.6 | protein_coding | HLA-DQB1 | 2 | OTTHUMG00000031404.2 | overlapping_locus |
499 | GL000251.2 | HAVANA | gene | 4,119,435 | 4,120,266 | 832 | - | 0 | ENSG00000228845.1 | unprocessed_pseudogene | MTCO3P1 | 2 | OTTHUMG00000031569.4 | null |
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