Split (1)

train · 64.8k rows

Unnamed: 0 int64 0 64.8k	seqname stringlengths 4 10	source stringclasses 2 values	feature stringclasses 1 value	start int64 1 249M	end int64 107 249M	score float64 8 205k	strand stringclasses 2 values	gene_id stringlengths 17 24	gene_type stringlengths 3 34	gene_name stringlengths 2 25	level int64 1 3	havana_gene stringlengths 20 22 ⌀	tag stringclasses 25 values
500	GL000251.2	HAVANA	gene	4,131,285	4,132,115	445	+	ENSG00000232026.1	processed_transcript	AL731683.1	2	OTTHUMG00000140114.1	null
501	GL000251.2	HAVANA	gene	4,144,013	4,144,950	357	-	ENSG00000224793.1	unprocessed_pseudogene	HLA-DQB3	2	OTTHUMG00000031407.2	null
502	GL000251.2	HAVANA	gene	4,055,484	4,160,989	3,147	+	ENSG00000257473.7	protein_coding	HLA-DQA2	2	OTTHUMG00000031388.2	null
503	GL000251.2	HAVANA	gene	4,169,671	4,177,108	2,029	-	ENSG00000224305.9	protein_coding	HLA-DQB2	2	OTTHUMG00000031405.2	null
504	GL000251.2	HAVANA	gene	4,224,964	4,229,249	1,858	-	ENSG00000241386.6	protein_coding	HLA-DOB	2	OTTHUMG00000031513.5	null
505	GL000251.2	HAVANA	gene	4,234,034	4,250,979	6,390	-	ENSG00000228582.9	protein_coding	TAP2	2	OTTHUMG00000031338.4	null
506	GL000251.2	HAVANA	gene	4,252,915	4,256,902	2,007	-	ENSG00000235715.6	protein_coding	PSMB8	2	OTTHUMG00000031583.3	null
507	GL000251.2	HAVANA	gene	4,256,285	4,258,694	1,951	+	ENSG00000235540.6	processed_transcript	PSMB8-AS1	2	OTTHUMG00000140125.1	overlapping_locus
508	GL000251.2	HAVANA	gene	4,257,408	4,266,177	4,578	-	ENSG00000232367.5	protein_coding	TAP1	2	OTTHUMG00000031337.3	null
509	GL000251.2	HAVANA	gene	4,256,335	4,291,786	3,310	+	ENSG00000243067.7	protein_coding	PSMB9	2	OTTHUMG00000031585.6	overlapping_locus
510	GL000251.2	HAVANA	gene	4,291,370	4,292,047	678	-	ENSG00000236093.1	transcribed_processed_pseudogene	PPP1R2P1	2	OTTHUMG00000031571.2	null
511	GL000251.2	HAVANA	gene	4,308,611	4,308,685	75	+	ENSG00000228785.1	unprocessed_pseudogene	HLA-Z	2	OTTHUMG00000031488.2	null
512	GL000251.2	HAVANA	gene	4,346,824	4,365,322	4,829	-	ENSG00000234154.10	protein_coding	HLA-DMB	2	OTTHUMG00000031467.4	overlapping_locus
513	GL000251.2	HAVANA	gene	4,360,810	4,382,925	2,675	-	ENSG00000243719.7	protein_coding	HLA-DMA	2	OTTHUMG00000031464.3	overlapping_locus
514	GL000251.2	HAVANA	gene	4,382,512	4,383,026	198	+	ENSG00000234673.1	processed_transcript	AL662845.1	2	OTTHUMG00000149985.1	overlapping_locus
515	GL000251.2	HAVANA	gene	4,380,869	4,393,720	6,957	+	ENSG00000234507.9	protein_coding	BRD2	2	OTTHUMG00000031541.5	overlapping_locus
516	GL000251.2	HAVANA	gene	4,416,346	4,421,780	4,012	-	ENSG00000232962.11	protein_coding	HLA-DOA	2	OTTHUMG00000031511.4	null
517	GL000251.2	HAVANA	gene	4,491,301	4,491,710	410	+	ENSG00000228579.1	processed_pseudogene	RPL32P1	2	OTTHUMG00000031490.1	overlapping_locus
518	GL000251.2	HAVANA	gene	4,476,420	4,492,625	5,748	-	ENSG00000224103.7	protein_coding	HLA-DPA1	2	OTTHUMG00000031328.7	null
519	GL000251.2	HAVANA	gene	4,487,777	4,498,987	2,781	+	ENSG00000230708.10	protein_coding	HLA-DPB1	2	OTTHUMG00000031346.8	overlapping_locus
520	GL000251.2	HAVANA	gene	4,503,526	4,509,112	733	-	ENSG00000223990.1	unprocessed_pseudogene	HLA-DPA2	2	OTTHUMG00000031331.2	null
521	GL000251.2	HAVANA	gene	4,515,549	4,519,104	676	-	ENSG00000230816.1	unprocessed_pseudogene	COL11A2P1	2	OTTHUMG00000031335.2	null
522	GL000251.2	HAVANA	gene	4,524,222	4,540,543	1,591	+	ENSG00000225132.9	transcribed_unprocessed_pseudogene	HLA-DPB2	2	OTTHUMG00000031350.2	null
523	GL000251.2	HAVANA	gene	4,542,673	4,554,810	229	-	ENSG00000227936.1	unprocessed_pseudogene	HLA-DPA3	2	OTTHUMG00000031333.2	null
524	GL000251.2	HAVANA	gene	4,556,275	4,559,268	716	+	ENSG00000237196.1	processed_transcript	HCG24	2	OTTHUMG00000031448.2	null
525	GL000251.2	HAVANA	gene	4,574,189	4,604,006	6,740	-	ENSG00000227801.8	protein_coding	COL11A2	2	OTTHUMG00000031306.4	null
526	GL000251.2	ENSEMBL	gene	4,611,106	4,611,201	96	+	ENSG00000266781.2	misc_RNA	RF00019	3	null	null
527	GL000251.2	HAVANA	gene	4,605,095	4,612,358	4,089	-	ENSG00000227322.11	protein_coding	RXRB	2	OTTHUMG00000031596.5	null
528	GL000251.2	HAVANA	gene	4,611,950	4,615,944	2,845	+	ENSG00000226614.11	protein_coding	SLC39A7	2	OTTHUMG00000031538.4	null
529	GL000251.2	HAVANA	gene	4,616,147	4,618,332	1,171	+	ENSG00000228712.2	protein_coding	HSD17B8	2	OTTHUMG00000031397.2	null
530	GL000251.2	HAVANA	gene	4,619,998	4,624,223	1,816	+	ENSG00000226788.3	protein_coding	RING1	2	OTTHUMG00000031576.2	null
531	GL000251.2	HAVANA	gene	4,627,206	4,627,829	624	+	ENSG00000230949.1	processed_pseudogene	ZNF70P1	2	OTTHUMG00000031428.2	null
532	GL000251.2	HAVANA	gene	4,649,316	4,651,207	984	+	ENSG00000237536.1	processed_pseudogene	HTATSF1P1	2	OTTHUMG00000031382.2	null
533	GL000251.2	HAVANA	gene	4,661,031	4,666,486	1,374	+	ENSG00000224096.5	processed_transcript	HCG25	2	OTTHUMG00000031453.3	null
534	GL000251.2	HAVANA	gene	4,661,769	4,683,528	4,503	-	ENSG00000225590.9	protein_coding	VPS52	2	OTTHUMG00000031574.9	null
535	GL000251.2	HAVANA	gene	4,683,491	4,687,991	1,898	+	ENSG00000235650.6	protein_coding	RPS18	2	OTTHUMG00000031323.4	null
536	GL000251.2	HAVANA	gene	4,688,613	4,690,306	1,694	+	ENSG00000226936.4	protein_coding	B3GALT4	2	OTTHUMG00000031381.2	null
537	GL000251.2	HAVANA	gene	4,690,589	4,701,012	3,115	-	ENSG00000204221.11	protein_coding	WDR46	2	OTTHUMG00000031491.4	null
538	GL000251.2	HAVANA	gene	4,700,787	4,709,886	2,953	+	ENSG00000237335.8	protein_coding	PFDN6	2	OTTHUMG00000031547.3	null
539	GL000251.2	HAVANA	gene	4,703,139	4,710,809	4,541	-	ENSG00000224841.9	protein_coding	RGL2	2	OTTHUMG00000031342.4	null
540	GL000251.2	HAVANA	gene	4,711,179	4,725,870	4,999	-	ENSG00000112493.12	protein_coding	TAPBP	2	OTTHUMG00000031360.3	null
541	GL000251.2	HAVANA	gene	4,725,901	4,729,427	2,715	-	ENSG00000229253.5	protein_coding	ZBTB22	2	OTTHUMG00000031390.4	null
542	GL000251.2	HAVANA	gene	4,730,043	4,740,754	3,666	-	ENSG00000227046.8	protein_coding	DAXX	2	OTTHUMG00000031504.5	null
543	GL000251.2	HAVANA	gene	4,750,465	4,750,982	518	+	ENSG00000226575.3	processed_pseudogene	MYL8P	2	OTTHUMG00000031480.1	null
544	GL000251.2	HAVANA	gene	4,777,033	4,777,728	696	-	ENSG00000232639.4	processed_pseudogene	LYPLA2P1	2	OTTHUMG00000031408.2	null
545	GL000252.2	HAVANA	gene	49,226	49,597	372	-	ENSG00000230511.1	processed_pseudogene	NOP56P1	2	OTTHUMG00000148850.1	null
546	GL000252.2	HAVANA	gene	103,471	104,608	709	-	ENSG00000235460.1	processed_transcript	CR753651.1	2	OTTHUMG00000148852.1	null
547	GL000252.2	HAVANA	gene	127,018	127,649	632	+	ENSG00000224158.1	processed_pseudogene	RPL13P	2	OTTHUMG00000148853.1	null
548	GL000252.2	HAVANA	gene	125,227	128,952	2,458	-	ENSG00000225604.1	processed_transcript	LINC01623	2	OTTHUMG00000148851.1	null
549	GL000252.2	ENSEMBL	gene	243,078	243,376	299	+	ENSG00000263491.2	misc_RNA	RF00017	3	null	null
550	GL000252.2	HAVANA	gene	251,806	253,087	1,032	+	ENSG00000235405.2	processed_transcript	HCG15	2	OTTHUMG00000148855.1	overlapping_locus
551	GL000252.2	HAVANA	gene	252,403	254,139	317	+	ENSG00000239675.1	processed_transcript	CR759835.1	2	OTTHUMG00000148854.1	overlapping_locus
552	GL000252.2	HAVANA	gene	260,388	270,919	3,176	-	ENSG00000235178.4	protein_coding	ZNF311	2	OTTHUMG00000149018.1	null
553	GL000252.2	HAVANA	gene	292,283	293,210	928	-	ENSG00000225048.1	unprocessed_pseudogene	OR2AD1P	2	OTTHUMG00000149020.1	null
554	GL000252.2	HAVANA	gene	309,816	310,843	1,028	-	ENSG00000229328.1	protein_coding	OR2W1	2	OTTHUMG00000149017.3	null
555	GL000252.2	HAVANA	gene	337,425	338,200	776	-	ENSG00000237608.1	unprocessed_pseudogene	OR2P1P	2	OTTHUMG00000149021.1	null
556	GL000252.2	ENSEMBL	gene	329,599	342,125	414	+	ENSG00000275606.1	protein_coding	CR388407.1	3	null	null
557	GL000252.2	HAVANA	gene	342,174	342,769	596	-	ENSG00000229179.1	processed_pseudogene	SAR1AP1	2	OTTHUMG00000149128.1	null
558	GL000252.2	HAVANA	gene	351,908	352,914	1,007	-	ENSG00000225736.3	protein_coding	OR2B3	2	OTTHUMG00000149019.3	null
559	GL000252.2	HAVANA	gene	366,551	367,489	939	+	ENSG00000226192.1	unprocessed_pseudogene	OR2J1	2	OTTHUMG00000148856.2	null
560	GL000252.2	HAVANA	gene	377,493	378,428	936	+	ENSG00000229866.1	protein_coding	OR2J3	2	OTTHUMG00000148858.2	null
561	GL000252.2	HAVANA	gene	389,811	394,509	389	+	ENSG00000227448.1	processed_transcript	CR388415.1	2	OTTHUMG00000149115.1	null
562	GL000252.2	HAVANA	gene	403,478	404,414	937	-	ENSG00000236771.2	unprocessed_pseudogene	CR388415.2	2	OTTHUMG00000148857.1	null
563	GL000252.2	HAVANA	gene	438,910	440,181	1,272	+	ENSG00000232945.4	protein_coding	OR2J2	2	OTTHUMG00000148865.3	null
564	GL000252.2	HAVANA	gene	447,125	448,060	936	+	ENSG00000228483.2	unprocessed_pseudogene	OR2J4P	2	OTTHUMG00000148860.1	null
565	GL000252.2	HAVANA	gene	480,874	481,817	944	+	ENSG00000229441.1	unprocessed_pseudogene	CR933537.1	2	OTTHUMG00000148861.1	null
566	GL000252.2	HAVANA	gene	494,865	495,795	931	-	ENSG00000224990.1	unprocessed_pseudogene	OR2G1P	2	OTTHUMG00000148864.1	null
567	GL000252.2	HAVANA	gene	528,315	529,691	879	-	ENSG00000233168.1	unprocessed_pseudogene	OR2U1P	2	OTTHUMG00000148863.1	null
568	GL000252.2	HAVANA	gene	489,611	532,697	464	+	ENSG00000235273.1	processed_transcript	CR753509.2	2	OTTHUMG00000148859.1	null
569	GL000252.2	HAVANA	gene	534,074	535,033	960	-	ENSG00000234351.1	unprocessed_pseudogene	OR2U2P	2	OTTHUMG00000148862.1	null
570	GL000252.2	HAVANA	gene	556,340	557,282	943	+	ENSG00000232469.1	unprocessed_pseudogene	CR753509.1	2	OTTHUMG00000148868.1	null
571	GL000252.2	HAVANA	gene	572,333	573,298	966	+	ENSG00000237777.4	protein_coding	OR14J1	2	OTTHUMG00000148867.2	null
572	GL000252.2	HAVANA	gene	595,270	596,705	1,436	-	ENSG00000228197.1	processed_pseudogene	DDX6P1	2	OTTHUMG00000148869.1	null
573	GL000252.2	HAVANA	gene	662,064	663,132	1,069	+	ENSG00000227446.2	protein_coding	OR12D2	2	OTTHUMG00000148866.2	null
574	GL000252.2	HAVANA	gene	682,794	683,756	963	+	ENSG00000249103.1	unprocessed_pseudogene	OR12D1	2	OTTHUMG00000148870.2	null
575	GL000252.2	HAVANA	gene	688,137	697,489	218	-	ENSG00000230742.3	processed_transcript	OR5V1	2	OTTHUMG00000148872.1	overlapping_locus
576	GL000252.2	HAVANA	gene	704,828	706,499	1,672	+	ENSG00000229412.5	protein_coding	OR10C1	2	OTTHUMG00000148879.3	null
577	GL000252.2	HAVANA	gene	639,071	715,620	2,011	-	ENSG00000242022.8	protein_coding	OR12D3	2	OTTHUMG00000148878.1	overlapping_locus
578	GL000252.2	HAVANA	gene	691,032	722,594	2,864	-	ENSG00000234347.8	protein_coding	OR11A1	2	OTTHUMG00000148873.1	overlapping_locus
579	GL000252.2	HAVANA	gene	722,704	729,851	3,708	+	ENSG00000232984.8	protein_coding	OR2H1	2	OTTHUMG00000148877.1	null
580	GL000252.2	HAVANA	gene	730,119	735,329	381	-	ENSG00000233989.1	unprocessed_pseudogene	UBDP1	2	OTTHUMG00000148875.1	null
581	GL000252.2	HAVANA	gene	740,548	741,594	1,047	-	ENSG00000229889.1	unprocessed_pseudogene	MAS1LP1	2	OTTHUMG00000148871.1	null
582	GL000252.2	HAVANA	gene	752,289	753,425	1,137	-	ENSG00000228515.3	protein_coding	MAS1L	2	OTTHUMG00000148876.2	null
583	GL000252.2	HAVANA	gene	754,794	755,199	406	-	ENSG00000223769.3	processed_pseudogene	RPS17P1	2	OTTHUMG00000148874.1	null
584	GL000252.2	HAVANA	gene	763,032	776,079	877	+	ENSG00000232356.1	processed_transcript	CR388393.1	2	OTTHUMG00000148880.1	null
585	GL000252.2	HAVANA	gene	794,947	799,095	2,777	+	ENSG00000224446.5	processed_transcript	LINC01015	2	OTTHUMG00000148881.1	null
586	GL000252.2	HAVANA	gene	803,231	804,314	1,084	-	ENSG00000225274.1	unprocessed_pseudogene	GPR53P	2	OTTHUMG00000148893.1	null
587	GL000252.2	HAVANA	gene	818,762	819,709	948	+	ENSG00000237725.2	unprocessed_pseudogene	OR2I1P	2	OTTHUMG00000148979.1	null
588	GL000252.2	HAVANA	gene	821,155	825,468	990	-	ENSG00000231968.2	protein_coding	UBD	2	OTTHUMG00000148975.1	overlapping_locus
589	GL000252.2	HAVANA	gene	839,458	840,385	928	+	ENSG00000225955.2	unprocessed_pseudogene	OR2H5P	2	OTTHUMG00000148977.1	null
590	GL000252.2	HAVANA	gene	843,008	843,297	290	+	ENSG00000232189.2	processed_pseudogene	TMEM183AP1	2	OTTHUMG00000148980.1	null
591	GL000252.2	ENSEMBL	gene	847,798	847,881	84	+	ENSG00000265926.1	snoRNA	SNORD32B	3	null	null
592	GL000252.2	HAVANA	gene	848,057	848,574	518	+	ENSG00000227961.1	processed_pseudogene	RPL13AP	2	OTTHUMG00000148974.1	null
593	GL000252.2	HAVANA	gene	853,004	854,587	1,584	+	ENSG00000229680.4	protein_coding	OR2H2	2	OTTHUMG00000148972.1	null
594	GL000252.2	HAVANA	gene	821,155	898,710	7,011	-	ENSG00000237112.8	protein_coding	GABBR1	2	OTTHUMG00000148971.1	overlapping_locus
595	GL000252.2	HAVANA	gene	901,607	901,890	284	-	ENSG00000229210.3	processed_pseudogene	SUMO2P1	2	OTTHUMG00000148973.1	null
596	GL000252.2	HAVANA	gene	922,526	937,918	3,058	+	ENSG00000234623.9	protein_coding	MOG	2	OTTHUMG00000148976.2	null
597	GL000252.2	HAVANA	gene	937,938	946,648	2,149	-	ENSG00000223852.7	protein_coding	ZFP57	2	OTTHUMG00000148978.1	null
598	GL000252.2	HAVANA	gene	973,655	974,077	423	-	ENSG00000238053.1	processed_pseudogene	ZDHHC20P1	2	OTTHUMG00000148882.1	null
599	GL000252.2	HAVANA	gene	986,055	987,045	991	-	ENSG00000233617.1	unprocessed_pseudogene	CR753818.1	2	OTTHUMG00000148899.1	null

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