query stringclasses 190 values | positive listlengths 1 5 | negative listlengths 4 4 | system stringlengths 69 2.19k |
|---|---|---|---|
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'Clearly, these repair systems in B. burgdorferi do not seem as robust at defending against oxidation of DNA as those described in E. coli.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'The lack of key repair enzymes in this system may indicate that B. burgdorferi DNA is not subjected to the same challenge from ROS as is E. coli.
', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'The lack of key repair enzymes in this system may indicate that B. burgdorferi DNA is not subjected to the same challenge from ROS as is E. coli.
', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'In contrast to most bacteria, B. burgdorferi membranes contained significant levels of unsaturated fatty acids, such as linoleic acid and linolenic acid, which were derived from the growth media (Table 1).', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Thus, it seemed possible that lipids and/or proteins rather than DNA are the primary targets of ROS in B. burgdorferi.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'As B. burgdorferi may be exposed to potentially harmful oxygen species at different stages of the infective cycle, the ability to protect its membrane lipids from ROS should be required for survival in the different host environments.', answer the user's query. |
What is the biomedical concept corresponding to 'h. pylori'? | [
"helicobacter pylori (campylobacter pylori subsp. pylori)",
"campylobacter pylori (helicobacter pylori)",
"campylobacter pylori subsp. pylori (helicobacter pylori)",
"campylobacter pyloridis (helicobacter pylori)",
"helicobacter nemestrinae (helicobacter pylori)"
] | [
"helicobacter",
"helicobacter suis (candidatus helicobacter suis)",
"helicobacter pylori (strain nctc11638) (helicobacter pylori nctc 11638)",
"helicobacter muridarum"
] | Given the context 'In H. pylori, lipid hydroperoxide levels in ahpC mutants are approximately three times higher than in wild-type cells, suggesting a role for AhpC in reducing organic peroxides (Wang et al., 2006a,b).', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'In exponentially growing E. coli, Imlay and Fridovich (1991) have shown that both O2- and H2O2 are generated by the autoxidation of components of the respiratory chain during oxygen metabolism.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'In contrast, B. burgdorferi is very metabolically limited and has no enzymes for the TCA cycle or respiration.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'In addition, the current practice of growing B. burgdorferi under atmospheric oxygen could itself be unintentionally compromising cell integrity during in vitro manipulations.
', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Analyses of the B. burgdorferi genome indicates that only a few genes encoding putative oxidative stress/intracellular redox proteins (SodA, NapA, BosR, CoADR, Trx and TrxR)', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Despite this apparent ‘deficiency’ in the number of ROS-protective enzymes, B. burgdorferi cells appear to be able to cope with physiologically relevant levels of ROS.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'There are several factors that would contribute to this phenomenon: (i) as B. burgdorferi does not harbour the genes encoding respiratory enzymes nor metabolize oxygen, it seems unlikely that significant levels of ROS are generated via the incomplete reduction of O2 during cellular metabolism.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'This would suggest that potential ROS challenges to B. burgdorferi would come almost completely from extracellular sources with little contribution from intracellularly generated ROS; (ii) owing to a lack of understanding of the physiological conditions in vector and host tissues infected with B. burgdorferi, it is difficult to assess the levels and/or sites of the potential ROS challenge during the infective cycle and (iii) most importantly, analyses of the potential targets for ROS in B. burgdorferi strongly suggested that the major targets of oxidative damage are different and perhaps less extensive in this bacterium than in other bacterial pathogens (e.g. E. coli).', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'This would suggest that potential ROS challenges to B. burgdorferi would come almost completely from extracellular sources with little contribution from intracellularly generated ROS; (ii) owing to a lack of understanding of the physiological conditions in vector and host tissues infected with B. burgdorferi, it is difficult to assess the levels and/or sites of the potential ROS challenge during the infective cycle and (iii) most importantly, analyses of the potential targets for ROS in B. burgdorferi strongly suggested that the major targets of oxidative damage are different and perhaps less extensive in this bacterium than in other bacterial pathogens (e.g. E. coli).', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'This would suggest that potential ROS challenges to B. burgdorferi would come almost completely from extracellular sources with little contribution from intracellularly generated ROS; (ii) owing to a lack of understanding of the physiological conditions in vector and host tissues infected with B. burgdorferi, it is difficult to assess the levels and/or sites of the potential ROS challenge during the infective cycle and (iii) most importantly, analyses of the potential targets for ROS in B. burgdorferi strongly suggested that the major targets of oxidative damage are different and perhaps less extensive in this bacterium than in other bacterial pathogens (e.g. E. coli).', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'This would suggest that potential ROS challenges to B. burgdorferi would come almost completely from extracellular sources with little contribution from intracellularly generated ROS; (ii) owing to a lack of understanding of the physiological conditions in vector and host tissues infected with B. burgdorferi, it is difficult to assess the levels and/or sites of the potential ROS challenge during the infective cycle and (iii) most importantly, analyses of the potential targets for ROS in B. burgdorferi strongly suggested that the major targets of oxidative damage are different and perhaps less extensive in this bacterium than in other bacterial pathogens (e.g. E. coli).', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Taken together, this suggests that B. burgdorferi would be innately more resistant to ROS and require a less extensive repertoire of enzymes to protect the cells from oxidative damage.
', answer the user's query. |
What is the biomedical concept corresponding to 'borrelia burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Experimental procedures
Strains, growth conditions and reagents
Borrelia burgdorferi strain B31A3 and strain B314 (Sadziene et al., 1993) were grown in modified BSK-II (Barbour, 1984) medium at 34°C under an atmosphere of 0–20% O2 with 5% CO2 and the balance N2.', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'E. coli strain Top10, strain TA4315 (ahpCF) (Storz et al., 1989) and CM1319 (mutM) (Bridges et al., 1996) were grown in Luria–Bertani (LB) at 37°C with shaking.
', answer the user's query. |
What is the biomedical concept corresponding to 'borrelia burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Per cent survivability assays
Borrelia burgdorferi strain B31A3 was grown to a cell density of 5 × 107 cells ml−1 in BSK II under microaerobic (3% O2) conditions, the culture split and the cells treated with varying concentrations of oxidants (0–50 mM t-butyl hydroperoxide or H2O2) at 34°C for 4 h. After the incubation, cells were diluted in fresh BSK II, plated on BSK plates and incubated 7–14 days at 34°C.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Determination of the spontaneous mutation rate
To determine spontaneous resistance to coumermycin A1, B. burgdorferi B31A3 cells were grown under microaerobic conditions to a cell density of 5 × 107 cells ml−1 and treated with 5 mM H2O2 for 1 h at 34°C.', answer the user's query. |
What is the biomedical concept corresponding to 'borrelia burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Measurement of DNA base lesions
Borrelia burgdorferi B31A3 cells were grown in BSK-II under microaerobic conditions to a cell density of 5 × 107 cells ml−1, treated with various oxidants (1 or 10 mM t-butyl hydroperoxide, 1 or 10 mM H2O2, 10 mM paraquat or lipoxidase) for 4 h and total DNA was isolated using Wizard Genomic DNA Purification Kit (Promega Corp., Madison, WI).', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'As a control, E. coli TA4315 cells were grown in minimal media to OD600 of 0.4, treated with 0 or 100 µM H2O2 for 30 min and DNA isolated.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'B. burgdorferi strain B314 cells were grown under microaerobic conditions and DNA isolated.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'To determine the amount of 8-oxoguanine in B. burgdorferi DNA, cells were grown and treated as described above and DNA isolated.', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'As a control, E. coli CM1319 (mutM) cells were grown in LB to OD600 of 0.4, treated with 0 or 100 µM H2O2 for 1 h and DNA isolated.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Lipid analyses
To determine fatty acid content in B. burgdorferi total membranes, B. burgdorferi strain B31A3 was grown under anaerobic conditions to a cell density of 5 × 107 cells ml−1, harvested by centrifugation (5000 g, 15 min, 4°C) and washed two times with HN (20 mM NaCl, 50 mM Hepes, pH 7.6) buffer.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Lipid analyses
To determine fatty acid content in B. burgdorferi total membranes, B. burgdorferi strain B31A3 was grown under anaerobic conditions to a cell density of 5 × 107 cells ml−1, harvested by centrifugation (5000 g, 15 min, 4°C) and washed two times with HN (20 mM NaCl, 50 mM Hepes, pH 7.6) buffer.', answer the user's query. |
What is the biomedical concept corresponding to 'b. burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'To determine the effects of oxidants on fatty acid composition, a 1.5 l culture of B. burgdorferi strain B31A3 was grown under microaerobic conditions to a cell density of 5 × 107 cells ml−1.', answer the user's query. |
What is the biomedical concept corresponding to 'borrelia burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Measurement of MDA
Borrelia burgdorferi strain B31A3 was grown aerobically, microaerobically and anaerobically as described above to a cell density of 5 × 107 cells ml−1.', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'As a negative control, E. coli Top10 cells were grown to OD600 of 0.4, treated with 0 or 5 mM AAPH for 30 min and MDA measured as above.', answer the user's query. |
What is the biomedical concept corresponding to 'mouse'? | [
"mouse (mus musculus)",
"mus musculus (house mouse)",
"house mouse (mus musculus)"
] | [
"mouse (mus <genus>)",
"mice (mus <genus>) (mus <genus>)",
"mus <genus> (mice (mus <genus>))",
"mus musculus musculus (eastern european house mouse)"
] | Given the context 'As a positive control, mouse myeloma SP2/O cells were cultured with HYQ-CCM1 (HyClone) medium at 37°C in a humidified 5% CO2 atmosphere, treated with 1 mM AAPH at 37°C for 4 h (Chotimarkorn et al., 2005) and MDA measured as above.
', answer the user's query. |
What is the biomedical concept corresponding to 'borrelia burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Identification of lipid damage using Diphenyl-1-pyrenylphosphine fluorescent stain
Borrelia burgdorferi strain B31A3 cells were grown microaerobically as described above until a cell density of 5 × 107 cells ml−1 was obtained.', answer the user's query. |
What is the biomedical concept corresponding to 'rabbit'? | [
"rabbit (oryctolagus cuniculus)",
"european rabbit (oryctolagus cuniculus)",
"domestic rabbit (oryctolagus cuniculus)",
"rabbits (oryctolagus cuniculus)",
"japanese white rabbit (oryctolagus cuniculus)"
] | [
"rabbits and hares (leporidae)",
"swamp rabbit (sylvilagus aquaticus)",
"lepus cuniculus cuniculus (oryctolagus cuniculus cuniculus)",
"marsh rabbit (sylvilagus palustris)"
] | Given the context 'Briefly, after cells were stained with the Red Fluorescent dye, 2 ml of rabbit serum was added to stop the reaction and the mixture incubated for 1 min at RT.', answer the user's query. |
What is the biomedical concept corresponding to 'mouse'? | [
"mouse (mus musculus)",
"mus musculus (house mouse)",
"house mouse (mus musculus)"
] | [
"mouse (mus <genus>)",
"mice (mus <genus>) (mus <genus>)",
"mus <genus> (mice (mus <genus>))",
"mus musculus musculus (eastern european house mouse)"
] | Given the context 'As a positive control, mouse myeloma SP2/O cells were cultured with HYQ-CCM1 (HyClone) medium at 37°C in a humidified 5% CO2 atmosphere, treated with 1 mM AAPH at 37°C for 4 h (Chotimarkorn et al., 2005) and stained as described above.', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'As a negative control, E. coli Top10 cells were grown to OD600 of 0.4, treated with 0 or 5 mM AAPH for 30 min and stained as described above.
', answer the user's query. |
What is the biomedical concept corresponding to 'borrelia burgdorferi'? | [
"borrelia burgdorferi (borreliella burgdorferi)",
"borreliella burgdorferi (lyme disease spirochete)",
"lyme disease spirochete (borreliella burgdorferi)"
] | [
"borrelia burgdorferi sensu lato (borreliella)",
"borreliella (borrelia burgdorferi sensu lato)",
"lyme disease borrelia (borreliella)",
"borrelia africana (candidatus borrelia africana)"
] | Given the context 'Electron microscopy
Borrelia burgdorferi cells were grown under microaerobic or anaerobic conditions to a cell density of 5 × 107 cells ml−1.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'In the initial analysis of the autoantibody profile in 39 Chinese BD patients, autoantibodies to cellular proteins were uncovered in 23% as determined by immunoblotting.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'Serum from a BD patient was used as a probe to immunoscreen a λZAP expression cDNA library.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'Reactivity was also examined with normal control sera and disease control sera from patients with lupus and Sjögren's syndrome.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'Six independent candidate clones were isolated from the cDNA library screen and were identified as overlapping partial human kinectin cDNAs.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'The finding that kinectin was an autoantigen was verified in 9 out of 39 (23%) BD patient sera by immunoprecipitation of the in vitro translation products.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'Nevertheless, since the 1960s, there have been reports of autoantibodies against certain unknown components of human oral mucosa in sera of patients with BD.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'Nevertheless, since the 1960s, there have been reports of autoantibodies against certain unknown components of human oral mucosa in sera of patients with BD.', answer the user's query. |
What is the biomedical concept corresponding to 'streptococcus sanguis'? | [
"streptococcus sanguinis"
] | [
"streptococcus parasuis",
"streptococcus oralis (streptococcus oralis bridge and sneath 1982)",
"streptococcus suis",
"streptococcus mutans"
] | Given the context 'Since then, sporadic reports on findings of autoantibodies in this disease have been described, such as antibodies to retinal antigen(s), heat shock protein (HSP) of some strains of Streptococcus sanguis cross-reactive with human HSP polypeptide', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'Since then, sporadic reports on findings of autoantibodies in this disease have been described, such as antibodies to retinal antigen(s), heat shock protein (HSP) of some strains of Streptococcus sanguis cross-reactive with human HSP polypeptide', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'Materials and methods
Patients and sera
The currently used empirical criteria for the diagnosis of BD in this study were the criteria proposed by the International Study Group for BD (abbreviated as 'International Criteria')', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'The study subjects of 39 Chinese BD patients comprised 17 males and 22 females, mean age 37 ± 11.3 years old, who were divided into two subgroups: 25 typical BD patients (Group I, satisfying the International Criteria) and 14 clinically diagnosed BD patients who had recurrent oral ulcers and one of the symptoms of genital ulcers, eye symptoms or skin lesions as defined by the International Criteria, as well as additional symptom(s) closely related to BD as listed in the International Criteria, that is, gastrointestinal ulcerations, deep vein thrombosis or arthralgia/arthritis without evidence that the latter symptoms might be related to any other disease (Group II, defined as 'probable BD' in this study).', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'The study subjects of 39 Chinese BD patients comprised 17 males and 22 females, mean age 37 ± 11.3 years old, who were divided into two subgroups: 25 typical BD patients (Group I, satisfying the International Criteria) and 14 clinically diagnosed BD patients who had recurrent oral ulcers and one of the symptoms of genital ulcers, eye symptoms or skin lesions as defined by the International Criteria, as well as additional symptom(s) closely related to BD as listed in the International Criteria, that is, gastrointestinal ulcerations, deep vein thrombosis or arthralgia/arthritis without evidence that the latter symptoms might be related to any other disease (Group II, defined as 'probable BD' in this study).', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'The study subjects of 39 Chinese BD patients comprised 17 males and 22 females, mean age 37 ± 11.3 years old, who were divided into two subgroups: 25 typical BD patients (Group I, satisfying the International Criteria) and 14 clinically diagnosed BD patients who had recurrent oral ulcers and one of the symptoms of genital ulcers, eye symptoms or skin lesions as defined by the International Criteria, as well as additional symptom(s) closely related to BD as listed in the International Criteria, that is, gastrointestinal ulcerations, deep vein thrombosis or arthralgia/arthritis without evidence that the latter symptoms might be related to any other disease (Group II, defined as 'probable BD' in this study).', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'Disease controls included 10 patients with SLE and 10 with SjS, all satisfying corresponding international classification criteria.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'All BD patients and disease controls involved in the study were patients treated at the Rheumatology Department of Ren Ji Hospital, Shanghai, China, where their clinical data and serum samples were collected.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'All BD patients and disease controls involved in the study were patients treated at the Rheumatology Department of Ren Ji Hospital, Shanghai, China, where their clinical data and serum samples were collected.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'This study was approved by the institution review board of Ren Ji Hospital which is affiliated with Shanghai Second Medical University, and each patient involved gave informed consent.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'Cell lines and cell extracts
HeLa (ATCC CCL 2.2) and T24 (human transitional cell bladder carcinoma) were obtained from the American Type Culture Collection (Rockville, MD, USA).', answer the user's query. |
What is the biomedical concept corresponding to 'bovine'? | [
"bovine (bos taurus)",
"cow (bos taurus) (bos taurus)",
"bos bovis (bos taurus)",
"domestic cattle (bos taurus)",
"domestic cow (bos taurus)"
] | [
"cattle (bos)",
"bos (cattle)",
"bovidae",
"bos taurus indicus (bos indicus)"
] | Given the context 'A bovine aortic endothelial cell line was kindly provided by Dr Eugene G Levin from the Scripps Research Institute (La Jolla, CA, USA).', answer the user's query. |
What is the biomedical concept corresponding to 'calf'? | [
"bovine (bos taurus)",
"cow (bos taurus) (bos taurus)",
"domestic cow (bos taurus)",
"bos bovis (bos taurus)"
] | [
"cattle (bos)",
"bovidae",
"bos (cattle)",
"equus subg. equus (equus)"
] | Given the context 'Cells were cultured in DMEM containing 10% calf serum, harvested and extracted in Buffer A (150 mM NaCl, 10 mM Tris-HCl, pH7.2, 0.5% Nonidet P-40) with protease inhibitor (Complete™; Boehringer Mannheim, Indianapolis, IN, USA).', answer the user's query. |
What is the biomedical concept corresponding to 'bovine'? | [
"bovine (bos taurus)",
"cow (bos taurus) (bos taurus)",
"bos bovis (bos taurus)",
"domestic cattle (bos taurus)",
"domestic cow (bos taurus)"
] | [
"cattle (bos)",
"bos (cattle)",
"bovidae",
"bos taurus indicus (bos indicus)"
] | Given the context 'Western blot
Whole cell lysates from bovine aortic endothelial cell, HeLa and T24 cells were resolved individually by discontinuous 7.5% gel SDS-PAGE according to Laemmli's method', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'Nitrocellulose strips were blocked with 3% nonfat milk in PBS containing 0.05% Tween-20 (PBS-T) and then incubated with BD patient sera and normal control sera (1:100 dilution) at room temperature for 1 h. Filters were washed extensively with PBS-T to remove any unbound antibodies.', answer the user's query. |
What is the biomedical concept corresponding to 'goat'? | [
"domestic goat (capra hircus)",
"goats (capra hircus)",
"goat (capra hircus) (capra hircus)",
"capra aegagrus hircus (capra hircus)",
"capra hircus (capra aegagrus hircus)"
] | [
"wild goat (capra aegagrus)",
"capra aegagrus (capra hircus aegagrus)",
"capra",
"capra hircus aegagrus (capra aegagrus)"
] | Given the context 'Bound antibodies were detected with polyvalent, peroxidase-conjugated goat anti-human Ig and visualized by incubating the nitrocellulose strips in chemiluminescent reagents (NEN Life Science Products Inc., Boston, MA, USA) and exposing to Kodak XAR-5 films.
', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'Bound antibodies were detected with polyvalent, peroxidase-conjugated goat anti-human Ig and visualized by incubating the nitrocellulose strips in chemiluminescent reagents (NEN Life Science Products Inc., Boston, MA, USA) and exposing to Kodak XAR-5 films.
', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'Screening of phage cDNA expression library with antibody probes
Serum from a BD patient showing the highest antibody titer in immunoblotting was selected as a probe and used at a dilution of 1:300 for initial immunoscreening of approximately 106 recombinants from a T24 cDNA expression library.', answer the user's query. |
What is the biomedical concept corresponding to 'rabbit'? | [
"rabbit (oryctolagus cuniculus)",
"european rabbit (oryctolagus cuniculus)",
"domestic rabbit (oryctolagus cuniculus)",
"rabbits (oryctolagus cuniculus)",
"japanese white rabbit (oryctolagus cuniculus)"
] | [
"rabbits and hares (leporidae)",
"swamp rabbit (sylvilagus aquaticus)",
"lepus cuniculus cuniculus (oryctolagus cuniculus cuniculus)",
"marsh rabbit (sylvilagus palustris)"
] | Given the context 'In brief, 1 μg of the pBK-CMV plasmid identified in the screening outlined above was added as template in a 50-μl reaction for the coupled in vitro transcription and translation reaction with a rabbit reticulocyte lysate system (Promega, Madison, WI, USA) in the presence of 35S-methionine (Trans-35S label; ICN Biochemicals, Costa Mesa, CA, USA) and RNasin® Ribonuclease Inhibitor (Stratagene) as recommended by the manufacturer (Promega).', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'Results and discussion
Autoantibody detection in sera from BD patients
Initial examination of a group of 39 BD patients using indirect immunofluorescence (IIF) on a HEp-2 cell substrate did not yield any characteristic nuclear or cytoplasmic staining patterns.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'Results and discussion
Autoantibody detection in sera from BD patients
Initial examination of a group of 39 BD patients using indirect immunofluorescence (IIF) on a HEp-2 cell substrate did not yield any characteristic nuclear or cytoplasmic staining patterns.', answer the user's query. |
What is the biomedical concept corresponding to 'bovine'? | [
"bovine (bos taurus)",
"cow (bos taurus) (bos taurus)",
"bos bovis (bos taurus)",
"domestic cattle (bos taurus)",
"domestic cow (bos taurus)"
] | [
"cattle (bos)",
"bos (cattle)",
"bovidae",
"bos taurus indicus (bos indicus)"
] | Given the context 'In this study, the use of bovine aortic endothelial cells as substrate for IIF did not provide any additional data.', answer the user's query. |
What is the biomedical concept corresponding to 'bovine'? | [
"bovine (bos taurus)",
"cow (bos taurus) (bos taurus)",
"bos bovis (bos taurus)",
"domestic cattle (bos taurus)",
"domestic cow (bos taurus)"
] | [
"cattle (bos)",
"bos (cattle)",
"bovidae",
"bos taurus indicus (bos indicus)"
] | Given the context 'However, Western blot analysis of the BD sera began to show some interesting autoreactivity using cell lysates from both HeLa and bovine aortic endothelial cells.', answer the user's query. |
What is the biomedical concept corresponding to 'bovine'? | [
"bovine (bos taurus)",
"cow (bos taurus) (bos taurus)",
"bos bovis (bos taurus)",
"domestic cattle (bos taurus)",
"domestic cow (bos taurus)"
] | [
"cattle (bos)",
"bos (cattle)",
"bovidae",
"bos taurus indicus (bos indicus)"
] | Given the context 'Since the 49 kDa and 120 kDa bands were observed in cell extracts from bovine as well as human cell lines, these autoantigens might be evolutionarily conserved.
', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'Since the 49 kDa and 120 kDa bands were observed in cell extracts from bovine as well as human cell lines, these autoantigens might be evolutionarily conserved.
', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'I definitive BD patients with the strongest reactivity to 49 kDa and 120 kDa antigens (Fig. 1, lane 2) was selected as antibody probe for expression library screening.
', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'Their identities were established as overlapping partial cDNAs of human kinectin, ranging from 1.9 kb to 3 kb (Fig. 2a).', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'The full-length human kinectin (GenBank accession number NM_182926[27]) has 4,816 bases containing an open reading frame coding 1,357 amino acid residues with molecular mass 156 kDa.', answer the user's query. |
What is the biomedical concept corresponding to 'chick'? | [
"chicken (gallus gallus)",
"chickens (gallus gallus)",
"gallus gallus (gallus gallus domesticus)",
"gallus domesticus (gallus gallus)",
"gallus gallus domesticus (gallus gallus)"
] | [
"gallus",
"landfowls (galliformes)",
"avian (aves)",
"gallus gallus gallus (gallus gallus philippensis)"
] | Given the context 'Kinectin was initially identified in chick embryo brain microsome as an integral membrane protein anchored in endoplasmic reticulum and involved in kinesin-driven vesicle motility along microtubules [28,29].', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"true yeasts (saccharomycotina)",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)"
] | Given the context 'Yeast two-hybrid screen studies from several laboratories have revealed the interaction of the Rho family of GTPase with kinectin, and have shown the functional links among RhoG, kinectin and kinesin, with kinectin as a key effector of RhoG microtubule-dependent cellular activity [32].', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'Out of 39 BD patient sera, nine (23%) recognized the BD44 translation product (Fig. 3), whereas sera from 20 normal controls, 10 SLE and 10 SjS patients did not show reactivity.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'Out of 39 BD patient sera, nine (23%) recognized the BD44 translation product (Fig. 3), whereas sera from 20 normal controls, 10 SLE and 10 SjS patients did not show reactivity.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'Among the nine anti-kinectin positive patients, six (6/25, 24%) were from Group I (definitive BD) including the BD patient whose serum was used in the immunoscreening of expression cDNA library, and three (3/14, 21.4%) patients were from the Group II (probable BD) in this study.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'Among the nine anti-kinectin positive patients, six (6/25, 24%) were from Group I (definitive BD) including the BD patient whose serum was used in the immunoscreening of expression cDNA library, and three (3/14, 21.4%) patients were from the Group II (probable BD) in this study.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'Among the nine anti-kinectin positive patients, six (6/25, 24%) were from Group I (definitive BD) including the BD patient whose serum was used in the immunoscreening of expression cDNA library, and three (3/14, 21.4%) patients were from the Group II (probable BD) in this study.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'The combined data substantiated the finding that kinectin is an autoantigen that can be recognized by sera from 23% of Chinese BD patients in this study with at least one immunoreactive region or autoepitope residing within the BD44 encoded polypeptide.
', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'As discussed above, differential diagnosis of BD might be confusing in clinical practice since no specific laboratory test is available, and some patients may have symptoms and signs strongly suggestive of BD but do not fully satisfy the International Criteria, as in the Group II (probable BD) patients in our study group.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'As discussed above, differential diagnosis of BD might be confusing in clinical practice since no specific laboratory test is available, and some patients may have symptoms and signs strongly suggestive of BD but do not fully satisfy the International Criteria, as in the Group II (probable BD) patients in our study group.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'A number of investigators have pointed out that a comprehensive analysis of the clinical data for a given patient is very important for correct clinical diagnosis of BD, and that classification/diagnosis criteria, including the International Criteria, should be followed but should not be exclusive.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'The observation that three out of 14 patients in the probable BD group also had antibody to kinectin and the similar percentage of positive reactors between this group and Group I (21.4% versus 24%) supports this notion.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'The further use of non-clinical parameters such as immunological biomarkers as adjuncts to identify BD patients could be of help in the classification of this disease entity
While our work was ongoing, anti-kinectin antibodies were reported in sera from patients with hepatocellular carcinoma (HCC)', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'The further use of non-clinical parameters such as immunological biomarkers as adjuncts to identify BD patients could be of help in the classification of this disease entity
While our work was ongoing, anti-kinectin antibodies were reported in sera from patients with hepatocellular carcinoma (HCC)', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'The first HCC report [35] identified kinectin as a tumor-associated antigen from the screening of an autologous cDNA library constructed from the cancer of a 30-year-old patient from Guangxi, China.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'This report stated that four out of five HCC patients tested were positive for anti-kinectin antibody', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'In 2004, another laboratory also reported the cloning of kinectin as a tumor-associated antigen from a (presumably) different 30-year-old Chinese HCC patient [36].', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'In contrast, anti-kinectin antibodies were not detected in other studies of HCC patients associated with our laboratory [39,40].', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'The initial report by Hirano et al. identified kinectin by screening an aplastic anemia patient for candidate antigens using a Clontech human fetal liver cDNA expression library and it was concluded that seven out of 18 aplastic anemia patients were positive for anti-kinectin while none of the normal or disease controls had this antibody', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'The initial report by Hirano et al. identified kinectin by screening an aplastic anemia patient for candidate antigens using a Clontech human fetal liver cDNA expression library and it was concluded that seven out of 18 aplastic anemia patients were positive for anti-kinectin while none of the normal or disease controls had this antibody', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'The initial report by Hirano et al. identified kinectin by screening an aplastic anemia patient for candidate antigens using a Clontech human fetal liver cDNA expression library and it was concluded that seven out of 18 aplastic anemia patients were positive for anti-kinectin while none of the normal or disease controls had this antibody', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'In their recent report, Hirano et al. reported that anti-kinectin antibodies were found in 39% of aplastic anemia patients from the United States but only in three out of 30 (10%) cases in Japan [38].', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'In our study reported here, kinectin antibodies were only detected in BD patients and not in normal controls and SLE and SjS disease controls.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'None of the BD patients with anti-kinectin had signs of HCC or aplastic anemia at the time of diagnosis and at up to 4 years of follow-up.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'Giantin, the highest molecular weight Golgi autoantigen reported, is the predominant target of human anti-Golgi complex antibodies and multiple non-cross-reactive epitopes have been mapped spanning the 350 kDa protein', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"this",
"genus",
"species"
] | Given the context 'Conclusion
Here we report the detection of kinectin autoantibody in 23% of Chinese patients with BD.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'In an effort to clarify the association of BD with antibody to kinectin, it is essential to measure antibody to kinectin in larger patient populations including both BD, probable BD and important autoimmune rheumatic diseases such as SLE, SjS, rheumatoid arthritis etc., as well as those diseases not easily differentiated from BD, such as recurrent aphthous oral ulcer, Reiter's syndrome, inflammatory bowel diseases etc.', answer the user's query. |
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