instruction stringlengths 209 946 | input stringlengths 96 1.45k | response stringlengths 3 12 |
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<Instruct>: Given the context 'Regardless of the presence of the basidiomycota-specific SH3 domains of Ste50 that are known to be required for full virulence of Ustilago maydis, Ste50 was dispensable for virulence of C. neoformans in a murine model of cryptococcosis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ustilago maydis; c. neoformans]
<Options>: A: ustilago maydis (aka mycosarcoma maydis)
B: ustilago bromina
C: cryptococcus neoformans bt1
D: cryptococcus neoformans var. gattii (aka cryptococcus gattii)
E: cryptococcus neoformans bt2
F: ustilago phragmitis
G: cryptococcus neoformans bt19
H: ustilago avenae (ustilago aegilopsidis) (aka ustilago avenae)
I: ustilago filiformis
J: torulopsis neoformans (aka cryptococcus neoformans)
K: None of the above. | [A; J] |
<Instruct>: Given the context 'In conclusion, the Ste50 adaptor protein controls sexual differentiation of C. neoformans via the pheromone-responsive MAPK pathway but is not required for virulence.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. neoformans]
<Options>: A: cryptococcus neoformans c23
B: cryptococcus neoformans bt7
C: cryptococcus neoformans (filobasidiella neoformans kwon-chung, 1976) (aka cryptococcus neoformans)
D: cryptococcus neoformans var. neoformans (filobasidiella neoformans var. neoformans) (aka cryptococcus neoformans var. neoformans)
E: cryptococcus neoformans bt1
F: None of the above. | [C] |
<Instruct>: Given the context 'To test whether emergent facilitation may occur in a natural system, we performed an enclosure experiment where we mimicked fish predation by selectively removing large zooplankton and subsequently following the response of the invertebrate predator Bythotrephes longimanus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bythotrephes longimanus]
<Options>: A: palinurus longimanus (aka justitia longimana)
B: bythotrephes longimanus
C: bathymedon longimanus (halimedon longimanus) (aka bathymedon longimanus)
D: chirotenon longimanus
E: paratergatis longimanus
F: None of the above. | [B] |
<Instruct>: Given the context 'Positive responses to harvest were observed in the biomass of juvenile individuals of the dominant zooplankton Holopedium gibberum and in Bythotrephes densities.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [holopedium gibberum]
<Options>: A: holopedium gibberum
B: geodia gibberosa
C: pleurobema gibberum (aka pleuronaia gibber)
D: cymbella gibberula
E: cyphotilapia gibberosa
F: None of the above. | [A] |
<Instruct>: Given the context 'To examine how the isolation of a food web affects its structure, we construct local food webs of specialist herbivores and their natural enemies on 82 individual oaks (Quercus robur) growing in different landscape contexts.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [oaks; quercus robur]
<Options>: A: english oak (aka quercus robur)
B: quercus nigra (water oak) (aka quercus nigra)
C: quercus alba (white oak) (aka quercus alba)
D: quercus borealis (aka quercus rubra)
E: quercus faginea
F: southern red oak (aka quercus falcata)
G: quercus grisea
H: southern live oak (aka quercus virginiana)
I: quercus nivea
J: None of the above. | [A; A] |
<Instruct>: Given the context 'To examine how the isolation of a food web affects its structure, we construct local food webs of specialist herbivores and their natural enemies on 82 individual oaks (Quercus robur) growing in different landscape contexts.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [oaks; quercus robur]
<Options>: A: southern red oak (aka quercus falcata)
B: white oak (aka quercus alba)
C: english oak (aka quercus robur)
D: northern red oak (aka quercus rubra)
E: quercus radiata
F: quercus virginiana (southern live oak) (aka quercus virginiana)
G: quercus borealis (aka quercus rubra)
H: quercus oleoides
I: quercus germana
J: None of the above. | [C; C] |
<Instruct>: Given the context 'Mannitol permeation and radial flow of water in maize roots.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize]
<Options>: A: agrococcus terreus
B: agrococcus citreus
C: perennial teosinte (aka zea perennis)
D: agromyces ramosus (agromyces ramosum) (aka agromyces ramosus)
E: zea mays (zea mays var. japonica) (aka zea mays)
F: None of the above. | [E] |
<Instruct>: Given the context 'Mannitol permeation and radial flow of water in maize roots.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize]
<Options>: A: perennial teosinte (aka zea perennis)
B: agromyces ramosus (agromyces ramosum) (aka agromyces ramosus)
C: agrococcus terreus
D: agrococcus citreus
E: None of the above. | [E] |
<Instruct>: Given the context 'Therefore, mannitol transport from the medium to the shoot of young maize plants was studied at different rates of transpiration in hydroculture.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize]
<Options>: A: zea mays (zea mays var. japonica) (aka zea mays)
B: zelus grassans
C: corn smut (aka mycosarcoma maydis)
D: avenula agropyroides (aka helictochloa agropyroides)
E: maize weevil (aka sitophilus zeamais)
F: None of the above. | [A] |
<Instruct>: Given the context 'To resolve this, we investigated the mechanism by which the root herbivore Diabrotica virgifera induces resistance against lepidopteran herbivores in the leaves of Zea mays.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [diabrotica virgifera; zea mays]
<Options>: A: zelus tetracanthus
B: trirhabda virgata
C: zea mays var. japonica (aka zea mays)
D: zea ramosa (aka zea mays subsp. mays)
E: villadia virgata (cotyledon virgata) (aka villadia virgata)
F: zephyranthes challensis
G: corn earworm (aka helicoverpa zea)
H: commiphora virgata
I: diabrotica virgifera
J: bombyx virgo (aka apantesis virgo)
K: None of the above. | [I; C] |
<Instruct>: Given the context 'To resolve this, we investigated the mechanism by which the root herbivore Diabrotica virgifera induces resistance against lepidopteran herbivores in the leaves of Zea mays.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [diabrotica virgifera; zea mays]
<Options>: A: allotropa virgata
B: phylica virgata
C: zelus tetracanthus
D: diabrotica virgifera
E: zephyranthes challensis
F: rhamnus virgata
G: zela zeus
H: rinorea virgata (scyphellandra virgata) (aka rinorea virgata)
I: maize (aka zea mays)
J: corn earworm (aka helicoverpa zea)
K: None of the above. | [D; I] |
<Instruct>: Given the context 'Diabrotica virgifera infested plants suffered less aboveground herbivory in the field and showed reduced growth of Spodoptera littoralis caterpillars in the laboratory.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [diabrotica virgifera; spodoptera littoralis]
<Options>: A: spodoptera albula (spodoptera sunia) (aka spodoptera albula)
B: villadia virgata (cotyledon virgata) (aka villadia virgata)
C: badiera virgata
D: melica virgata
E: thompsonia littoralis
F: spodoptera litura
G: diabrotica virgifera
H: spodoptera teferii
I: diabrotica virgifera virgifera (western corn rootworm) (aka diabrotica virgifera virgifera)
J: african cotton leafworm (aka spodoptera littoralis)
K: None of the above. | [G; J] |
<Instruct>: Given the context 'Diabrotica virgifera infested plants suffered less aboveground herbivory in the field and showed reduced growth of Spodoptera littoralis caterpillars in the laboratory.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [diabrotica virgifera; spodoptera littoralis]
<Options>: A: melica virgata
B: rhamnus virgata
C: pedicia littoralis
D: spodoptera littoralis (egyptian cotton leafworm) (aka spodoptera littoralis)
E: spatholobus littoralis
F: silpha littoralis (aka necrodes littoralis)
G: bombyx virgo (aka apantesis virgo)
H: spodoptera
I: diabrotica virgifera
J: commiphora virgata
K: None of the above. | [I; D] |
<Instruct>: Given the context 'The induction of ABA by itself was partly responsible for the induction of leaf defenses, but not for the resistance against S. littoralis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. littoralis]
<Options>: A: lepidochrysops littoralis
B: rauvolfia littoralis
C: saldinia littoralis
D: lycosa littoralis (aka arctosa littoralis)
E: spodoptera littoralis (egyptian cotton leafworm) (aka spodoptera littoralis)
F: None of the above. | [E] |
<Instruct>: Given the context 'The induction of ABA by itself was partly responsible for the induction of leaf defenses, but not for the resistance against S. littoralis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. littoralis]
<Options>: A: rauvolfia littoralis
B: lycosa littoralis (aka arctosa littoralis)
C: saldinia littoralis
D: lepidochrysops littoralis
E: None of the above. | [E] |
<Instruct>: Given the context 'acon-3, the Neurospora crassa ortholog of the developmental modifier, medA, complements the conidiation defect of the Aspergillus nidulans mutant.
Aspergillus nidulans and Neurospora crassa are ascomycetes that produce asexual spores through morphologically distinct processes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [neurospora crassa; aspergillus nidulans]
<Options>: A: aspergillus aureus
B: amyloporiella crassa (aka resinoporia crassa)
C: neurospora nigeriensis
D: aspergillus nidulellus (aka aspergillus nidulans)
E: neurospora pannonica
F: neurospora crassa (chrysonilia crassa) (aka neurospora crassa)
G: nassella nidulans
H: neurospora stellata
I: aspergillus domesticus
J: aspergillus aureolus (neosartorya aureola) (aka aspergillus aureolus)
K: None of the above. | [F; D] |
<Instruct>: Given the context 'acon-3, the Neurospora crassa ortholog of the developmental modifier, medA, complements the conidiation defect of the Aspergillus nidulans mutant.
Aspergillus nidulans and Neurospora crassa are ascomycetes that produce asexual spores through morphologically distinct processes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [neurospora crassa; aspergillus nidulans]
<Options>: A: neurospora terricola
B: neurospora terricola fgsc 1889
C: neurospora crassa (chrysonilia crassa) (aka neurospora crassa)
D: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
E: tryella crassa
F: aspergillus lanosus
G: aspergillus tritici (aka aspergillus neotritici)
H: aspergillus neoellipticus (aka aspergillus fumigatus)
I: neurospora uniporata
J: nassella nidulans
K: None of the above. | [C; D] |
<Instruct>: Given the context 'MedA, a protein with unknown function, is required for normal asexual and sexual development in A. nidulans.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. nidulans]
<Options>: A: aphanothece nidulans
B: aspergillus domesticus
C: aspergillus agricola
D: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
E: aspergillus cerealis
F: None of the above. | [D] |
<Instruct>: Given the context 'We determined that the N. crassa ortholog of medA is acon-3, a gene required for early conidiophore development and female fertility.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [n. crassa]
<Options>: A: tabernaemontana crassa
B: argis crassa (nectocrangon crassa) (aka argis crassa)
C: chrysonilia crassa (aka neurospora crassa)
D: norix crassus
E: napothera crassa (aka gypsophila crassa)
F: None of the above. | [C] |
<Instruct>: Given the context 'The amino acid sequences of A. nidulans MedA and N. crassa ACON-3 shared 37% identity and 51% similarity.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. nidulans; n. crassa]
<Options>: A: aspergillus domesticus
B: nautarachna crassa (delmea crassa) (aka nautarachna crassa)
C: chrysonilia crassa (aka neurospora crassa)
D: norix crassus
E: aspergillus nidulans var. nidulans (emericella nidulans var. nidulans) (aka aspergillus nidulans var. nidulans)
F: napothera crassa (aka gypsophila crassa)
G: neocosmospora crassa (aka fusarium crassum)
H: aspergillus fumigatus fresen., 1863 (aka aspergillus fumigatus)
I: sterigmatocystis nidulans (aka aspergillus nidulans)
J: aspergillus aureus
K: None of the above. | [I; C] |
<Instruct>: Given the context 'The amino acid sequences of A. nidulans MedA and N. crassa ACON-3 shared 37% identity and 51% similarity.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. nidulans; n. crassa]
<Options>: A: nansenia crassa
B: neurospora
C: aphanothece nidulans
D: aspergillus nidulans var. nidulans (emericella nidulans var. nidulans) (aka aspergillus nidulans var. nidulans)
E: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
F: aspergillus avenaceus
G: aspergillus cerealis
H: norix crassus
I: crassiana crassa (aka unio crassus)
J: neurospora crassa (chrysonilia crassa) (aka neurospora crassa)
K: None of the above. | [E; J] |
<Instruct>: Given the context 'The amino acid sequences of A. nidulans MedA and N. crassa ACON-3 shared 37% identity and 51% similarity.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. nidulans; n. crassa]
<Options>: A: aspergillus avenaceus
B: aphanothece nidulans
C: aspergillus nidulans var. nidulans (emericella nidulans var. nidulans) (aka aspergillus nidulans var. nidulans)
D: aspergillus cerealis
E: crassiana crassa (aka unio crassus)
F: norix crassus
G: neurospora
H: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
I: nansenia crassa
J: None of the above. | [H; J] |
<Instruct>: Given the context 'Nonetheless, expression of acon-3 using its native promoter complemented the conidiation defects of the A. nidulans DeltamedA and medA15 mutants.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. nidulans]
<Options>: A: aspergillus domesticus
B: aspergillus agricola
C: aspergillus fumigatus fresen., 1863 (aka aspergillus fumigatus)
D: aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884) (aka aspergillus oryzae)
E: sterigmatocystis nidulans (aka aspergillus nidulans)
F: None of the above. | [E] |
<Instruct>: Given the context 'Introduced brown trout alter native acanthocephalan infections in native fish.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [brown trout]
<Options>: A: salmo trutta (river trout) (aka salmo trutta)
B: salmo farioides
C: salmoneus brucei
D: lake trout (aka salvelinus namaycush)
E: salmo fario (aka salmo trutta fario)
F: None of the above. | [A] |
<Instruct>: Given the context 'In New Zealand, negative correlations between the presence of introduced brown trout (Salmo trutta) and native parasite burdens of the native roundhead galaxias (Galaxias anomalus) have been observed, suggesting that parasite dilution is occurring.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [brown trout; salmo trutta; roundhead galaxias; galaxias anomalus]
<Options>: A: speckled trout (aka cynoscion nebulosus)
B: salmo caspius (salmo trutta caspius) (aka salmo caspius)
C: galaxias
D: zinnia anomala
E: galaxias terenasus
F: salmo trutta fario (river trout) (aka salmo trutta fario)
G: galaxias occidentalis (western minnow) (aka galaxias occidentalis)
H: salmo umbla (aka salvelinus umbla)
I: sea trout (aka salmo trutta trutta)
J: salmo farioides
K: salmo trutta (river trout) (aka salmo trutta)
L: leontodon anomalus
M: southern flathead galaxias (aka galaxias sp. 'southern')
N: gnidia anomala
O: salmon trout (aka oncorhynchus masou)
P: galaxias anomalus
Q: longjawed galaxias (aka galaxias prognathus)
R: None of the above. | [K; K; P; P] |
<Instruct>: Given the context 'In New Zealand, negative correlations between the presence of introduced brown trout (Salmo trutta) and native parasite burdens of the native roundhead galaxias (Galaxias anomalus) have been observed, suggesting that parasite dilution is occurring.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [brown trout; salmo trutta; roundhead galaxias; galaxias anomalus]
<Options>: A: galaxias anomalus
B: bignose galaxias (aka galaxias macronasus)
C: southern flathead galaxias (aka galaxias sp. 'southern')
D: salmo marmoratus (salmo trutta marmoratus) (aka salmo marmoratus)
E: bull trout (aka salvelinus confluentus)
F: spotted galaxias (aka galaxias truttaceus)
G: salmo fario (aka salmo trutta fario)
H: salmo abanticus (salmo trutta abanticus) (aka salmo abanticus)
I: small pedder galaxias (aka galaxias parvus)
J: river trout (aka salmo trutta)
K: guyanagarika anomala
L: black galaxias (aka galaxias niger)
M: common river galaxias (aka galaxias vulgaris)
N: sea trout (aka salmo trutta trutta)
O: salmon trout (aka oncorhynchus masou)
P: salmo trutta fario (river trout) (aka salmo trutta fario)
Q: galaxias parvus (small pedder galaxias) (aka galaxias parvus)
R: longjawed galaxias (aka galaxias prognathus)
S: salmo trutta labrax (aka salmo labrax)
T: None of the above. | [J; J; A; A] |
<Instruct>: Given the context 'In New Zealand, negative correlations between the presence of introduced brown trout (Salmo trutta) and native parasite burdens of the native roundhead galaxias (Galaxias anomalus) have been observed, suggesting that parasite dilution is occurring.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [brown trout; salmo trutta; roundhead galaxias; galaxias anomalus]
<Options>: A: salmon trout (aka oncorhynchus masou)
B: galaxias parvus (small pedder galaxias) (aka galaxias parvus)
C: small pedder galaxias (aka galaxias parvus)
D: galaxias anomalus
E: salmo fario (aka salmo trutta fario)
F: bull trout (aka salvelinus confluentus)
G: bignose galaxias (aka galaxias macronasus)
H: spotted galaxias (aka galaxias truttaceus)
I: sea trout (aka salmo trutta trutta)
J: salmo trutta fario (river trout) (aka salmo trutta fario)
K: salmo abanticus (salmo trutta abanticus) (aka salmo abanticus)
L: common river galaxias (aka galaxias vulgaris)
M: southern flathead galaxias (aka galaxias sp. 'southern')
N: black galaxias (aka galaxias niger)
O: salmo trutta labrax (aka salmo labrax)
P: salmo marmoratus (salmo trutta marmoratus) (aka salmo marmoratus)
Q: longjawed galaxias (aka galaxias prognathus)
R: guyanagarika anomala
S: None of the above. | [S; S; D; D] |
<Instruct>: Given the context 'In New Zealand, negative correlations between the presence of introduced brown trout (Salmo trutta) and native parasite burdens of the native roundhead galaxias (Galaxias anomalus) have been observed, suggesting that parasite dilution is occurring.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [brown trout; salmo trutta; roundhead galaxias; galaxias anomalus]
<Options>: A: salmo salar (atlantic salmon) (aka salmo salar)
B: galaxias macronasus (bignose galaxias) (aka galaxias macronasus)
C: galaxias
D: aphodius anomalipus
E: rainbow trout (aka oncorhynchus mykiss)
F: galaxias anomalus
G: salmo keta (aka oncorhynchus keta)
H: spotted galaxias (aka galaxias truttaceus)
I: salmo marmoratus (salmo trutta marmoratus) (aka salmo marmoratus)
J: lake trout (aka salvelinus namaycush)
K: salmo trutta (river trout) (aka salmo trutta)
L: plegapteryx anomalus
M: salmo trutta trutta (sea trout) (aka salmo trutta trutta)
N: sea trout (aka salmo trutta trutta)
O: salmo trutta labrax (aka salmo labrax)
P: apogonops anomalus (aka verilus anomalus)
Q: golden galaxias (aka galaxias auratus)
R: alpine galaxias (aka galaxias paucispondylus)
S: glyptothorax galaxias
T: None of the above. | [K; K; F; F] |
<Instruct>: Given the context 'In New Zealand, negative correlations between the presence of introduced brown trout (Salmo trutta) and native parasite burdens of the native roundhead galaxias (Galaxias anomalus) have been observed, suggesting that parasite dilution is occurring.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [brown trout; salmo trutta; roundhead galaxias; galaxias anomalus]
<Options>: A: galaxias anomalus
B: guatteria anomala
C: salmo fario (aka salmo trutta fario)
D: galaxias
E: salmo gilae (aka oncorhynchus gilae)
F: speckled trout (aka cynoscion nebulosus)
G: longjawed galaxias (aka galaxias prognathus)
H: gnidia anomala
I: lake ohrid brown trout (aka salmo letnica)
J: zinnia anomala
K: river trout (aka salmo trutta fario)
L: salmo trutta (river trout) (aka salmo trutta)
M: galaxias fuscus (brown galaxias) (aka galaxias fuscus)
N: alpine galaxias (aka galaxias paucispondylus)
O: arripis trutta (australian salmon) (aka arripis trutta)
P: salmo salar (atlantic salmon) (aka salmo salar)
Q: plegapteryx anomalus
R: galaxias occidentalis (western minnow) (aka galaxias occidentalis)
S: salmo macrostigma (salmo trutta macrostigma) (aka salmo macrostigma)
T: None of the above. | [L; L; A; A] |
<Instruct>: Given the context 'We used a multiple-scale approach combining field observations, experimental infections and dynamic population modelling to investigate whether native Acanthocephalus galaxii acquisition by brown trout alters host-parasite dynamics in native roundhead galaxias.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [brown trout; roundhead galaxias]
<Options>: A: salmo keta (aka oncorhynchus keta)
B: brook trout (aka salvelinus fontinalis)
C: galaxias cobitinis (lowland longjaw galaxias) (aka galaxias cobitinis)
D: bull trout (aka salvelinus confluentus)
E: galaxias
F: small pedder galaxias (aka galaxias parvus)
G: galaxias macronasus (bignose galaxias) (aka galaxias macronasus)
H: alpine galaxias (aka galaxias paucispondylus)
I: adriatic trout (aka salmo obtusirostris)
J: river trout (aka salmo trutta)
K: None of the above. | [J; K] |
<Instruct>: Given the context 'We used a multiple-scale approach combining field observations, experimental infections and dynamic population modelling to investigate whether native Acanthocephalus galaxii acquisition by brown trout alters host-parasite dynamics in native roundhead galaxias.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [brown trout; roundhead galaxias]
<Options>: A: brook trout (aka salvelinus fontinalis)
B: small pedder galaxias (aka galaxias parvus)
C: salmo keta (aka oncorhynchus keta)
D: alpine galaxias (aka galaxias paucispondylus)
E: galaxias
F: adriatic trout (aka salmo obtusirostris)
G: galaxias cobitinis (lowland longjaw galaxias) (aka galaxias cobitinis)
H: bull trout (aka salvelinus confluentus)
I: galaxias macronasus (bignose galaxias) (aka galaxias macronasus)
J: None of the above. | [J; J] |
<Instruct>: Given the context 'We used a multiple-scale approach combining field observations, experimental infections and dynamic population modelling to investigate whether native Acanthocephalus galaxii acquisition by brown trout alters host-parasite dynamics in native roundhead galaxias.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [brown trout; roundhead galaxias]
<Options>: A: river trout (aka salmo trutta)
B: salmon trout (aka oncorhynchus masou)
C: longjawed galaxias (aka galaxias prognathus)
D: dwarf galaxias (aka galaxias divergens)
E: salmoneus brucei
F: salmo farioides
G: sea trout (aka salmo trutta trutta)
H: golden galaxias (aka galaxias auratus)
I: galaxias macronasus (bignose galaxias) (aka galaxias macronasus)
J: galaxias parvus (small pedder galaxias) (aka galaxias parvus)
K: None of the above. | [A; K] |
<Instruct>: Given the context '4. Field observations demonstrated higher infection intensity in introduced trout than in native galaxias, but only small, immature A. galaxii were present in trout.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [native galaxias; trout]
<Options>: A: golden galaxias (aka galaxias auratus)
B: sea trout (aka salmo trutta trutta)
C: golden trout (aka oncorhynchus mykiss aguabonita)
D: black galaxias (aka galaxias niger)
E: salmon trout (aka oncorhynchus masou)
F: salmo trutta (river trout) (aka salmo trutta)
G: bignose galaxias (aka galaxias macronasus)
H: swan galaxias (aka galaxias fontanus)
I: oncorhynchus gilae (salmo gilae) (aka oncorhynchus gilae)
J: galaxias vulgaris (common river galaxias) (aka galaxias vulgaris)
K: None of the above. | [K; F] |
<Instruct>: Given the context '4. Field observations demonstrated higher infection intensity in introduced trout than in native galaxias, but only small, immature A. galaxii were present in trout.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [native galaxias; trout]
<Options>: A: salmo keta (aka oncorhynchus keta)
B: river trout (aka salmo trutta)
C: galaxias vulgaris (common river galaxias) (aka galaxias vulgaris)
D: golden trout (aka oncorhynchus mykiss aguabonita)
E: dwarf galaxias (aka galaxias divergens)
F: salmo trutta trutta (sea trout) (aka salmo trutta trutta)
G: alpine galaxias (aka galaxias paucispondylus)
H: brook trout (aka salvelinus fontinalis)
I: swan galaxias (aka galaxias fontanus)
J: galaxias macronasus (bignose galaxias) (aka galaxias macronasus)
K: None of the above. | [K; B] |
<Instruct>: Given the context 'Experimental infections also demonstrated that A. galaxii does not mature in trout, although parasite establishment and initial growth were similar in the two hosts.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [trout]
<Options>: A: salmo mykiss (aka oncorhynchus mykiss)
B: salmo trutta (river trout) (aka salmo trutta)
C: black sea salmon (aka salmo labrax)
D: brook trout (aka salvelinus fontinalis)
E: golden trout (aka oncorhynchus mykiss aguabonita)
F: None of the above. | [B] |
<Instruct>: Given the context 'Taken together, these results support the hypothesis that trout may serve as an infection sink for the native parasite.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [trout]
<Options>: A: river trout (aka salmo trutta)
B: gila trout (aka oncorhynchus gilae)
C: salmo keta (aka oncorhynchus keta)
D: salmo mykiss (aka oncorhynchus mykiss)
E: salmon trout (aka oncorhynchus masou)
F: None of the above. | [A] |
<Instruct>: Given the context 'However, dynamic population modelling predicts that A. galaxii infections in native galaxias should at most only be slightly reduced by dilution in the presence of trout.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [galaxias; trout]
<Options>: A: salmo gilae (aka oncorhynchus gilae)
B: salmo trutta fario (river trout) (aka salmo trutta fario)
C: bignose galaxias (aka galaxias macronasus)
D: salmo trutta (river trout) (aka salmo trutta)
E: galaxia (aka galaxia <monocots>)
F: salmo trutta trutta (sea trout) (aka salmo trutta trutta)
G: black sea salmon (aka salmo labrax)
H: dwarf galaxias (aka galaxias divergens)
I: brown galaxias (aka galaxias fuscus)
J: galaxias
K: None of the above. | [K; D] |
<Instruct>: Given the context 'However, dynamic population modelling predicts that A. galaxii infections in native galaxias should at most only be slightly reduced by dilution in the presence of trout.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [galaxias; trout]
<Options>: A: black sea salmon (aka salmo labrax)
B: brown galaxias (aka galaxias fuscus)
C: salmo trutta fario (river trout) (aka salmo trutta fario)
D: dwarf galaxias (aka galaxias divergens)
E: galaxias
F: bignose galaxias (aka galaxias macronasus)
G: galaxia (aka galaxia <monocots>)
H: salmo gilae (aka oncorhynchus gilae)
I: salmo trutta trutta (sea trout) (aka salmo trutta trutta)
J: None of the above. | [J; J] |
<Instruct>: Given the context 'However, dynamic population modelling predicts that A. galaxii infections in native galaxias should at most only be slightly reduced by dilution in the presence of trout.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [galaxias; trout]
<Options>: A: galaxia <sponges> (galaxia turner, 2020) (aka galaxia <sponges>)
B: golden trout (aka oncorhynchus mykiss aguabonita)
C: brown galaxias (aka galaxias fuscus)
D: common river galaxias (aka galaxias vulgaris)
E: river trout (aka salmo trutta)
F: black galaxias (aka galaxias niger)
G: salmo keta (aka oncorhynchus keta)
H: salmon trout (aka oncorhynchus masou)
I: glyptothorax galaxias
J: brook trout (aka salvelinus fontinalis)
K: None of the above. | [K; E] |
<Instruct>: Given the context 'Rather, model exploration indicates parasite densities in galaxias are highly sensitive to galaxias predation on infected amphipods, and to relative abundances of galaxias and trout.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [galaxias; trout]
<Options>: A: sea trout (aka salmo trutta trutta)
B: glyptothorax galaxias
C: oncorhynchus gilae (salmo gilae) (aka oncorhynchus gilae)
D: salmo trutta (river trout) (aka salmo trutta)
E: dwarf galaxias (aka galaxias divergens)
F: galaxias fuscus (brown galaxias) (aka galaxias fuscus)
G: salmo mykiss (aka oncorhynchus mykiss)
H: black galaxias (aka galaxias niger)
I: salmon trout (aka oncorhynchus masou)
J: galaxia (aka galaxia <sponges>)
K: None of the above. | [K; D] |
<Instruct>: Given the context 'Rather, model exploration indicates parasite densities in galaxias are highly sensitive to galaxias predation on infected amphipods, and to relative abundances of galaxias and trout.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [galaxias; trout]
<Options>: A: brown galaxias (aka galaxias fuscus)
B: salmo trutta (river trout) (aka salmo trutta)
C: salmo keta (aka oncorhynchus keta)
D: dwarf galaxias (aka galaxias divergens)
E: salmo clarkii (aka oncorhynchus clarkii)
F: black sea salmon (aka salmo labrax)
G: galaxias vulgaris (common river galaxias) (aka galaxias vulgaris)
H: gollum galaxias (aka galaxias gollumoides)
I: black galaxias (aka galaxias niger)
J: salmo trutta fario (river trout) (aka salmo trutta fario)
K: None of the above. | [K; B] |
<Instruct>: Given the context 'Hence, trout presence may instead reduce parasite burdens in galaxias by either reducing galaxias density or by altering galaxias foraging behaviour.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [trout; galaxias]
<Options>: A: salmo trutta (river trout) (aka salmo trutta)
B: black sea salmon (aka salmo labrax)
C: salmo mykiss (aka oncorhynchus mykiss)
D: salmo gilae (aka oncorhynchus gilae)
E: galaxias niger (black galaxias) (aka galaxias niger)
F: bignose galaxias (aka galaxias macronasus)
G: galax
H: golden trout (aka oncorhynchus mykiss aguabonita)
I: longjawed galaxias (aka galaxias prognathus)
J: glyptothorax galaxias
K: None of the above. | [A; K] |
<Instruct>: Given the context 'Hence, trout presence may instead reduce parasite burdens in galaxias by either reducing galaxias density or by altering galaxias foraging behaviour.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [trout; galaxias]
<Options>: A: brook trout (aka salvelinus fontinalis)
B: river trout (aka salmo trutta)
C: bignose galaxias (aka galaxias macronasus)
D: glyptothorax galaxias
E: oncorhynchus gilae (salmo gilae) (aka oncorhynchus gilae)
F: black sea salmon (aka salmo labrax)
G: galaxia <sponges> (galaxia turner, 2020) (aka galaxia <sponges>)
H: galaxia (aka galaxia <monocots>)
I: salmo clarki (aka oncorhynchus clarkii)
J: galaxias niger (black galaxias) (aka galaxias niger)
K: None of the above. | [B; K] |
<Instruct>: Given the context 'Hence, trout presence may instead reduce parasite burdens in galaxias by either reducing galaxias density or by altering galaxias foraging behaviour.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [trout; galaxias]
<Options>: A: galaxia (aka galaxia <monocots>)
B: galaxia <sponges> (galaxia turner, 2020) (aka galaxia <sponges>)
C: black sea salmon (aka salmo labrax)
D: salmo clarki (aka oncorhynchus clarkii)
E: oncorhynchus gilae (salmo gilae) (aka oncorhynchus gilae)
F: bignose galaxias (aka galaxias macronasus)
G: brook trout (aka salvelinus fontinalis)
H: glyptothorax galaxias
I: galaxias niger (black galaxias) (aka galaxias niger)
J: None of the above. | [J; J] |
<Instruct>: Given the context '3. We used a multistate modelling framework to explore the effects of chronic infection with Plasmodium on survival and recapture probability in a large data set of breeding blue tits, involving 3424 individuals and 3118 infection diagnoses over nine years.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [blue tits]
<Options>: A: siberian tit (aka poecile cinctus)
B: blue tit (aka cyanistes caeruleus)
C: tityus fasciolatus
D: titiotus
E: yellow tit (aka machlolophus holsti)
F: None of the above. | [B] |
<Instruct>: Given the context '5. Infection with Plasmodium relictum was associated with reduced recapture probability and increased survival, compared to P. circumflexum, suggesting that these parasites have differing virulence and cause different types of selection on this host.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [plasmodium relictum; p. circumflexum]
<Options>: A: clostridium tertium (plectridium tertium) (aka clostridium tertium)
B: phacus circumflexus
C: plasmodium cathemerium (plasmodium (haemamoeba) cathemerium) (aka plasmodium cathemerium)
D: paramoera relicta (relictomoera relicta) (aka paramoera relicta)
E: plasmodium zonuriae
F: schistidium relictum
G: bacillus paraflexus (aka priestia paraflexa)
H: plasmodium relictum (plasmodium (haemamoeba) relictum) (aka plasmodium relictum)
I: parametopidium circumlabens
J: plasmodium circumflexum
K: None of the above. | [H; J] |
<Instruct>: Given the context '5. Infection with Plasmodium relictum was associated with reduced recapture probability and increased survival, compared to P. circumflexum, suggesting that these parasites have differing virulence and cause different types of selection on this host.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [plasmodium relictum; p. circumflexum]
<Options>: A: plasmodium malariae
B: disperis circumflexa
C: plasmodium matutinum (plasmodium relictum var. matutinum) (aka plasmodium matutinum)
D: plasmodium circumflexum
E: plasmodium zonuriae
F: plasmodium rouxi
G: psapharochrus circumflex (acanthoderes circumflexa) (aka psapharochrus circumflex)
H: peridermium filamentosum
I: dohrniphora circumflexa
J: plasmodium (haemamoeba) relictum (aka plasmodium relictum)
K: None of the above. | [J; D] |
<Instruct>: Given the context 'Three abundant and widespread host species (Tiaris bicolor, Coereba flaveola and Loxigilla noctis/barbadensis) were included in the study.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tiaris bicolor; coereba flaveola; loxigilla noctis; barbadensis]
<Options>: A: tiaris bicolor (aka melanospiza bicolor)
B: lophogorgia barbadensis (aka leptogorgia barbadensis)
C: little owl (aka athene noctua)
D: ischnodemus noctulus
E: typhlops bicolor (aka anilios bicolor)
F: euthera bicolor
G: masdevallia flaveola
H: cassida flaveola
I: pseudocophora flaveola
J: noctuana noctua (helias noctua) (aka noctuana noctua)
K: tenthredo flaveola
L: coccothrinax barbadensis
M: ornithoboea barbanthera
N: tetraponera bicolor
O: probata barbadensis (probata barbadensis (gmelin, 1791)) (aka probata barbadensis)
P: loxa viridis
Q: marcetia barbadensis
R: fringilla noctis (aka loxigilla noctis)
S: parus bicolor (aka baeolophus bicolor)
T: certhia flaveola (aka coereba flaveola)
U: None of the above. | [A; T; R; U] |
<Instruct>: Given the context 'Three abundant and widespread host species (Tiaris bicolor, Coereba flaveola and Loxigilla noctis/barbadensis) were included in the study.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tiaris bicolor; coereba flaveola; loxigilla noctis; barbadensis]
<Options>: A: loxa viridis
B: eionea flava
C: coccothrinax barbadensis
D: bananaquit (aka coereba flaveola)
E: barbatia barbata (arca barbata) (aka barbatia barbata)
F: tiaris bicolor (aka melanospiza bicolor)
G: coereba flaveola dispar
H: masdevallia flaveola
I: australothrips bicolor
J: barbus (barboides) wynaadensis (aka barbodes wynaadensis)
K: lipinia noctua (aka ornithuroscincus noctua)
L: lesser antillean bullfinch (aka loxigilla noctis)
M: probata barbadensis (gmelin, 1791) (aka probata barbadensis)
N: ornithoboea barbanthera
O: trigonopterus bicolor
P: colias flaveola flaveola
Q: noctule (aka nyctalus noctula)
R: tetraponera bicolor
S: tibouchina bicolor
T: leiopus nebulosus
U: None of the above. | [F; D; L; U] |
<Instruct>: Given the context 'Three abundant and widespread host species (Tiaris bicolor, Coereba flaveola and Loxigilla noctis/barbadensis) were included in the study.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tiaris bicolor; coereba flaveola; loxigilla noctis; barbadensis]
<Options>: A: cattleya bicolor
B: trigonopterus bicolor
C: eionea flava
D: probata barbadensis (gmelin, 1791) (aka probata barbadensis)
E: ischnodemus noctulus
F: noctule (aka nyctalus noctula)
G: amphilophus flaveolus
H: marcetia barbadensis
I: phrynus barbadensis
J: greater bulldog bat (aka noctilio leporinus)
K: typhlops bicolor (aka anilios bicolor)
L: tiaris bicolor (aka melanospiza bicolor)
M: loxigilla noctis (lesser antillean bullfinch) (aka loxigilla noctis)
N: barbaria
O: lophogorgia barbadensis (aka leptogorgia barbadensis)
P: eurycolpus flaveolus
Q: bananaquit (aka coereba flaveola)
R: noctuana noctua (helias noctua) (aka noctuana noctua)
S: triraphis bicolor
T: platycercus flaveolus
U: None of the above. | [L; Q; M; U] |
<Instruct>: Given the context 'Three abundant and widespread host species (Tiaris bicolor, Coereba flaveola and Loxigilla noctis/barbadensis) were included in the study.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tiaris bicolor; coereba flaveola; loxigilla noctis; barbadensis]
<Options>: A: tanacetipathes barbadensis (aphanipathes barbadensis) (aka tanacetipathes barbadensis)
B: parus bicolor (aka baeolophus bicolor)
C: tiaris bicolor (aka melanospiza bicolor)
D: lutzomyia nocticolus (aka psychodopygus nocticolus)
E: barbeya
F: coccoloba barbadensis
G: barbaria
H: tetraponera bicolor
I: ischnodemus noctulus
J: zombrus bicolor
K: bananaquit (aka coereba flaveola)
L: epipactis flava
M: little owl (aka athene noctua)
N: typhlops bicolor (aka anilios bicolor)
O: cassida flaveola
P: coereba flaveola dispar
Q: bossiaea barbarae
R: eristalinus flaveolus
S: noctule (aka nyctalus noctula)
T: fringilla noctis (aka loxigilla noctis)
U: None of the above. | [C; K; T; U] |
<Instruct>: Given the context 'Tiaris bicolor exhibited a significant positive correlation between haemosporidian beta diversity and beta diversity within the entire parasite assemblage.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tiaris bicolor]
<Options>: A: trypoxylon bicolor
B: tiaris bicolor (aka melanospiza bicolor)
C: tibouchina bicolor
D: triphyllus bicolor
E: cratopus bicolor (aka turdoides bicolor)
F: None of the above. | [B] |
<Instruct>: Given the context 'Analysis of expressed sequence tags from Maize mosaic rhabdovirus-infected gut tissues of Peregrinus maidis reveals the presence of key components of insect innate immunity.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize mosaic rhabdovirus; peregrinus maidis]
<Options>: A: maize mild mottle virus
B: maize dwarf mosaic potyvirus (aka maize dwarf mosaic virus)
C: peregrinus maidis (corn hopper) (aka peregrinus maidis)
D: maize mosaic virus (aka maize mosaic nucleorhabdovirus)
E: pseudopomatias maasseni
F: maize striate mosaic virus
G: pagodibela maia
H: wheat mosaic virus
I: tokoprymno maia
J: baetis maurus
K: None of the above. | [D; C] |
<Instruct>: Given the context 'Analysis of expressed sequence tags from Maize mosaic rhabdovirus-infected gut tissues of Peregrinus maidis reveals the presence of key components of insect innate immunity.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize mosaic rhabdovirus; peregrinus maidis]
<Options>: A: malthodes maurus
B: pseudopomatias maasseni
C: corn hopper (aka peregrinus maidis)
D: zea mosaic virus
E: tokoprymno maia
F: ramie mosaic virus (ramie mosaic begomovirus) (aka ramie mosaic virus)
G: maize mosaic virus (aka maize mosaic nucleorhabdovirus)
H: meligethes maurus
I: maize iranian mosaic virus (maize iranian mosaic nucleorhabdovirus) (aka maize iranian mosaic virus)
J: maize mild mottle virus
K: None of the above. | [G; C] |
<Instruct>: Given the context 'The corn planthopper, Peregrinus maidis, causes direct feeding damage to plants and transmits Maize mosaic rhabdovirus (MMV) in a persistent-propagative manner.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [corn planthopper; peregrinus maidis; maize mosaic rhabdovirus (mmv)]
<Options>: A: phoma cornina (aka pezicula cornina)
B: triticum mosaic virus
C: maize mosaic nucleorhabdovirus (maize mosaic virus) (aka maize mosaic nucleorhabdovirus)
D: soil-borne rye mosaic virus (aka soil-borne cereal mosaic virus)
E: corn ear worm (aka helicoverpa armigera)
F: corn leafhopper (aka dalbulus maidis)
G: maize iranian mosaic virus (maize iranian mosaic nucleorhabdovirus) (aka maize iranian mosaic virus)
H: corn hopper (aka peregrinus maidis)
I: avena agropyroides (aka helictochloa agropyroides)
J: aphelinus maidis
K: meligethes maurus
L: tummv (aka tuberose mild mosaic virus)
M: tokoprymno maia
N: sagittogethes maurus
O: None of the above. | [H; H; C] |
<Instruct>: Given the context 'The corn planthopper, Peregrinus maidis, causes direct feeding damage to plants and transmits Maize mosaic rhabdovirus (MMV) in a persistent-propagative manner.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [corn planthopper; peregrinus maidis; maize mosaic rhabdovirus (mmv)]
<Options>: A: malthodes maurus
B: maize dwarf mosaic virus (mdmv (aka maize dwarf mosaic virus))
C: corn earworm (aka helicoverpa zea)
D: western corn rootworm (aka diabrotica virgifera virgifera)
E: meligethes maurus
F: ramv (aka radish mosaic virus) (aka radish mosaic virus)
G: maize mosaic nucleorhabdovirus (maize mosaic virus) (aka maize mosaic nucleorhabdovirus)
H: cornus alpina
I: maize yellow mosaic virus
J: aphelinus maidis
K: cotton mosaic virus
L: corn hopper (aka peregrinus maidis)
M: trichogramma maidis
N: sitophilus oryzae (rice weevil) (aka sitophilus oryzae)
O: None of the above. | [L; L; G] |
<Instruct>: Given the context 'The corn planthopper, Peregrinus maidis, causes direct feeding damage to plants and transmits Maize mosaic rhabdovirus (MMV) in a persistent-propagative manner.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [corn planthopper; peregrinus maidis; maize mosaic rhabdovirus (mmv)]
<Options>: A: corn ear worm (aka helicoverpa armigera)
B: maize weevil (aka sitophilus zeamais)
C: maize mosaic virus (aka maize mosaic nucleorhabdovirus)
D: merremia mosaic geminivirus (aka merremia mosaic virus)
E: sitophilus oryzae (rice weevil) (aka sitophilus oryzae)
F: meligethes maurus
G: maize iranian mosaic virus (maize iranian mosaic nucleorhabdovirus) (aka maize iranian mosaic virus)
H: corn hopper (aka peregrinus maidis)
I: trichogramma maidis
J: baetis maurus
K: sagittogethes maurus
L: maize yellow mosaic virus
M: tummv (aka tuberose mild mosaic virus)
N: piptatherum alpestre (oryzopsis alpestris) (aka piptatherum alpestre)
O: None of the above. | [H; H; C] |
<Instruct>: Given the context 'MMV must cross several insect tissue layers for successful transmission to occur, and the gut serves as an important barrier for rhabdovirus transmission.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mmv]
<Options>: A: meno virus
B: meliandou mastomys virus
C: minute virus of mouse strain m
D: myeloblastosis associated virus, mav (aka avian myeloblastosis-associated virus)
E: melon mild mottle virus
F: None of the above. | [F] |
<Instruct>: Given the context 'In order to facilitate the identification of proteins that may interact with MMV either by facilitating acquisition or responding to virus infection, we generated and analysed the gut transcriptome of P. maidis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mmv; p. maidis]
<Options>: A: mouse mammary tumor virus mtv (aka mouse mammary tumor virus)
B: platystele viridis
C: aphelinus maidis
D: pallasea viridis
E: corn hopper (aka peregrinus maidis)
F: menangle virus
G: murmansk microtuspox virus
H: myeloblastosis-associated virus (aka avian myeloblastosis-associated virus)
I: priapus viridis (aka anemonia viridis)
J: murine minute virus (strain mvmi)
K: None of the above. | [K; E] |
<Instruct>: Given the context 'In order to facilitate the identification of proteins that may interact with MMV either by facilitating acquisition or responding to virus infection, we generated and analysed the gut transcriptome of P. maidis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mmv; p. maidis]
<Options>: A: megami mountain virus (aka muko virus)
B: corn hopper (aka peregrinus maidis)
C: mouse mammary tumor virus mmt (aka mouse mammary tumor virus)
D: melon mild mottle virus
E: pallasea viridis
F: menangle virus
G: perna viridis (asian green mussel) (aka perna viridis)
H: priapus viridis (aka anemonia viridis)
I: daphne mauritanica
J: meno virus
K: None of the above. | [K; B] |
<Instruct>: Given the context 'In order to facilitate the identification of proteins that may interact with MMV either by facilitating acquisition or responding to virus infection, we generated and analysed the gut transcriptome of P. maidis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mmv; p. maidis]
<Options>: A: mouse mammary tumor virus mmt (aka mouse mammary tumor virus)
B: menangle virus
C: megami mountain virus (aka muko virus)
D: priapus viridis (aka anemonia viridis)
E: daphne mauritanica
F: perna viridis (asian green mussel) (aka perna viridis)
G: melon mild mottle virus
H: meno virus
I: pallasea viridis
J: None of the above. | [J; J] |
<Instruct>: Given the context 'From two normalized cDNA libraries, we generated a P. maidis gut transcriptome composed of 20,771 expressed sequence tags (ESTs).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis]
<Options>: A: protoneura viridis
B: priapus viridis (aka anemonia viridis)
C: corn hopper (aka peregrinus maidis)
D: rhopalosiphum maidis (corn leaf aphid) (aka rhopalosiphum maidis)
E: phalaenopsis viridis
F: None of the above. | [C] |
<Instruct>: Given the context 'Comparison of P. maidis ESTs with other insect amino acid sequences revealed that P. maidis shares greatest sequence similarity with another hemipteran, the brown planthopper Nilaparvata lugens.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis; brown planthopper; nilaparvata lugens]
<Options>: A: timarcha lugens
B: mormidea lugens
C: corn hopper (aka peregrinus maidis)
D: protoneura viridis
E: pothea lugens (reduvius lugens) (aka pothea lugens)
F: trichogramma maidis
G: lintneria lugens (sphinx lugens) (aka lintneria lugens)
H: perophora viridis
I: bean pod borer (aka maruca testulalis)
J: phalaenopsis viridis
K: pea weevil (aka bruchus pisorum)
L: black desert grasshopper (aka taeniopoda eques)
M: peregrinus maidis (corn hopper) (aka peregrinus maidis)
N: brown planthopper (aka nilaparvata lugens)
O: None of the above. | [M; N; N] |
<Instruct>: Given the context 'Comparison of P. maidis ESTs with other insect amino acid sequences revealed that P. maidis shares greatest sequence similarity with another hemipteran, the brown planthopper Nilaparvata lugens.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis; brown planthopper; nilaparvata lugens]
<Options>: A: platystele viridis
B: corn hopper (aka peregrinus maidis)
C: saprinus lugens
D: prorodon viridis
E: mormidea lugens
F: dalbulus maidis (maize leafhopper) (aka dalbulus maidis)
G: black desert grasshopper (aka taeniopoda eques)
H: pea weevil (aka bruchus pisorum)
I: white-backed planthopper (aka sogatella furcifera)
J: brown planthopper (aka nilaparvata lugens)
K: maratus pardus
L: blue-legged grasshopper (aka metator pardalinus)
M: crinocerus lugens (aka athaumastus lugens)
N: lasiocnemus lugens
O: None of the above. | [B; J; J] |
<Instruct>: Given the context 'Comparison of P. maidis ESTs with other insect amino acid sequences revealed that P. maidis shares greatest sequence similarity with another hemipteran, the brown planthopper Nilaparvata lugens.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis; brown planthopper; nilaparvata lugens]
<Options>: A: corn hopper (aka peregrinus maidis)
B: pedaliodes petri maasseni
C: aphodius lugens
D: brown planthopper (aka nilaparvata lugens)
E: pea weevil (aka bruchus pisorum)
F: argia lugens (agrion lugens) (aka argia lugens)
G: trichogramma maidis
H: saprinus lugens
I: priapus viridis (aka anemonia viridis)
J: mormidea lugens
K: green leafhopper (aka empoasca vitis)
L: progomphus borealis
M: perna viridis (asian green mussel) (aka perna viridis)
N: black desert grasshopper (aka taeniopoda eques)
O: None of the above. | [A; D; D] |
<Instruct>: Given the context 'Comparison of P. maidis ESTs with other insect amino acid sequences revealed that P. maidis shares greatest sequence similarity with another hemipteran, the brown planthopper Nilaparvata lugens.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis; brown planthopper; nilaparvata lugens]
<Options>: A: trichogramma maidis
B: pedaliodes petri maasseni
C: progomphus borealis
D: argia lugens (agrion lugens) (aka argia lugens)
E: black desert grasshopper (aka taeniopoda eques)
F: pea weevil (aka bruchus pisorum)
G: perna viridis (asian green mussel) (aka perna viridis)
H: saprinus lugens
I: priapus viridis (aka anemonia viridis)
J: brown planthopper (aka nilaparvata lugens)
K: aphodius lugens
L: green leafhopper (aka empoasca vitis)
M: mormidea lugens
N: None of the above. | [N; J; J] |
<Instruct>: Given the context 'We identified 202 P. maidis transcripts with putative homology to proteins associated with insect innate immunity, including those implicated in the Toll, Imd, JAK/STAT, Jnk and the small-interfering RNA-mediated pathways.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis]
<Options>: A: corn hopper (aka peregrinus maidis)
B: perna viridis (asian green mussel) (aka perna viridis)
C: trichogramma maidis
D: peyronellaea prosopidis (aka didymella prosopidis)
E: daphne mauritanica
F: None of the above. | [A] |
<Instruct>: Given the context 'Sequence comparisons between our P. maidis gut EST collection and the currently available National Center for Biotechnology Information EST database collection for Ni. lugens revealed that a pathogen recognition receptor in the Imd pathway, peptidoglycan recognition protein-long class (PGRP-LC), is present in these two members of the family Delphacidae; however, these recognition receptors are lacking in the model hemipteran Acyrthosiphon pisum.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis; ni. lugens; acyrthosiphon pisum]
<Options>: A: unio lugens (aka lens lugens)
B: peregrinus maidis (corn hopper) (aka peregrinus maidis)
C: pestalotia viridis (aka hyalotia viridis)
D: maratus pardus
E: anarrhinum pedatum
F: aphis pisum (aka acyrthosiphon pisum)
G: timarcha lugens
H: pedaliodes petri maasseni
I: prorodon viridis
J: acronema radiatum (pimpinella radiata) (aka acronema radiatum)
K: argia lugens (agrion lugens) (aka argia lugens)
L: reduvius lugens (aka pothea lugens)
M: acrydium acuminatum (aka paulinia acuminata)
N: nilaparvata lugens (brown planthopper) (aka nilaparvata lugens)
O: pison atrum
P: None of the above. | [B; N; F] |
<Instruct>: Given the context 'Sequence comparisons between our P. maidis gut EST collection and the currently available National Center for Biotechnology Information EST database collection for Ni. lugens revealed that a pathogen recognition receptor in the Imd pathway, peptidoglycan recognition protein-long class (PGRP-LC), is present in these two members of the family Delphacidae; however, these recognition receptors are lacking in the model hemipteran Acyrthosiphon pisum.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis; ni. lugens; acyrthosiphon pisum]
<Options>: A: corn hopper (aka peregrinus maidis)
B: rhopalosiphum maidis (corn leaf aphid) (aka rhopalosiphum maidis)
C: anarrhinum pedatum
D: pseudagrion migratum (aka aciagrion migratum)
E: pallasea viridis
F: apion aciculare (aka helianthemapion aciculare)
G: afroptilum acutum (aka adafroptilum acutum)
H: sphinx lugens (aka lintneria lugens)
I: pea aphid (aka acyrthosiphon pisum)
J: saprinus lugens
K: crinocerus lugens (aka athaumastus lugens)
L: pedaliodes petri maasseni
M: nilaparvata lugens (brown planthopper) (aka nilaparvata lugens)
N: argia lugens (agrion lugens) (aka argia lugens)
O: protoneura viridis
P: None of the above. | [A; M; I] |
<Instruct>: Given the context 'Sequence comparisons between our P. maidis gut EST collection and the currently available National Center for Biotechnology Information EST database collection for Ni. lugens revealed that a pathogen recognition receptor in the Imd pathway, peptidoglycan recognition protein-long class (PGRP-LC), is present in these two members of the family Delphacidae; however, these recognition receptors are lacking in the model hemipteran Acyrthosiphon pisum.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis; ni. lugens; acyrthosiphon pisum]
<Options>: A: anemonia viridis (priapus viridis) (aka anemonia viridis)
B: acrydium acuminatum (aka paulinia acuminata)
C: aphelinus maidis
D: lintneria lugens (sphinx lugens) (aka lintneria lugens)
E: daphne mauritanica
F: acyrthosiphon
G: saxicola lugens (aka oenanthe lugens)
H: pison atrum
I: argia lugens (agrion lugens) (aka argia lugens)
J: acyrthosiphon gossypii
K: pea aphid (aka acyrthosiphon pisum)
L: pallasea viridis
M: peregrinus maidis (corn hopper) (aka peregrinus maidis)
N: crinocerus lugens (aka athaumastus lugens)
O: brown planthopper (aka nilaparvata lugens)
P: None of the above. | [M; O; K] |
<Instruct>: Given the context 'Sequence comparisons between our P. maidis gut EST collection and the currently available National Center for Biotechnology Information EST database collection for Ni. lugens revealed that a pathogen recognition receptor in the Imd pathway, peptidoglycan recognition protein-long class (PGRP-LC), is present in these two members of the family Delphacidae; however, these recognition receptors are lacking in the model hemipteran Acyrthosiphon pisum.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis; ni. lugens; acyrthosiphon pisum]
<Options>: A: aphelinus maidis
B: crinocerus lugens (aka athaumastus lugens)
C: acrydium acuminatum (aka paulinia acuminata)
D: anemonia viridis (priapus viridis) (aka anemonia viridis)
E: saxicola lugens (aka oenanthe lugens)
F: argia lugens (agrion lugens) (aka argia lugens)
G: brown planthopper (aka nilaparvata lugens)
H: pison atrum
I: pallasea viridis
J: daphne mauritanica
K: lintneria lugens (sphinx lugens) (aka lintneria lugens)
L: peregrinus maidis (corn hopper) (aka peregrinus maidis)
M: acyrthosiphon gossypii
N: acyrthosiphon
O: None of the above. | [L; G; O] |
<Instruct>: Given the context 'In addition, we identified sequences in the P. maidis gut transcriptome that share significant amino acid sequence similarities with the rhabdovirus receptor molecule, acetylcholine receptor (AChR), found in other hosts.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. maidis]
<Options>: A: platystele viridis
B: trichogramma maidis
C: corn hopper (aka peregrinus maidis)
D: perophora viridis
E: aphelinus maidis
F: None of the above. | [C] |
<Instruct>: Given the context 'Proteomics of cryoprotective dehydration in Megaphorura arctica Tullberg 1876 (Onychiuridae: Collembola).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [megaphorura arctica]
<Options>: A: microporella arctica
B: megaselia arcticae
C: meoneura arctica
D: onychiurus arcticus (aka megaphorura arctica)
E: boreomysis arctica (mysis arctica) (aka boreomysis arctica)
F: None of the above. | [D] |
<Instruct>: Given the context 'The Arctic springtail, Megaphorura arctica Tullberg 1876 (Onychiuridae: Collembola), is one of the few organisms known to survive the extreme stresses of its environment by using cryoprotective dehydration.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arctic springtail; megaphorura arctica]
<Options>: A: arctic shrew (aka sorex arcticus)
B: suaeda arctica
C: myxobolus arcticus
D: water springtail (aka podura aquatica)
E: sitta arctica (sitta europaea arctica) (aka sitta arctica)
F: sachaia arctica (aka parnassius arcticus)
G: hylemyia arctica (aka paradelia arctica)
H: mrakia arctica
I: megaphorura arctica (onychiurus arcticus) (aka megaphorura arctica)
J: megaselia arcticae
K: None of the above. | [I; I] |
<Instruct>: Given the context 'The Arctic springtail, Megaphorura arctica Tullberg 1876 (Onychiuridae: Collembola), is one of the few organisms known to survive the extreme stresses of its environment by using cryoprotective dehydration.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arctic springtail; megaphorura arctica]
<Options>: A: rhabdothermus arcticus
B: scotinotylus alpinus
C: eurytoma arctica
D: suaeda arctica
E: megaphorura arctica (onychiurus arcticus) (aka megaphorura arctica)
F: lepidurus arcticus
G: eumida arctica
H: sachaia arctica (aka parnassius arcticus)
I: mrakia arctica
J: megaselia arcticae
K: None of the above. | [E; E] |
<Instruct>: Given the context 'We have undertaken a proteomics study comparing M. arctica, acclimated at -2^0C, the temperature known to induce the production of the anhydroprotectant trehalose in this species, and -6^0C, the temperature at which trehalose expression plateaus, against control animals acclimated at +5^0C.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [m. arctica]
<Options>: A: mysis arctica (aka boreomysis arctica)
B: miscodera arctica
C: megaphorura arctica (onychiurus arcticus) (aka megaphorura arctica)
D: terrimonas arctica
E: marinitoga arctica
F: None of the above. | [C] |
<Instruct>: Given the context 'We identified genes of these subfamilies expressed by the lepidopterans Trichoplusia ni and Bombyx mori.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [trichoplusia ni; bombyx mori]
<Options>: A: bombus muscorum
B: branchiomma bombyx (amphitrite bombyx) (aka branchiomma bombyx)
C: notoligotrichum trichodon (polytrichum trichodon) (aka notoligotrichum trichodon)
D: bombyx catax (aka eriogaster catax)
E: trichoplusia ni granulosis virus (aka trichoplusia ni granulovirus)
F: nosema trichoplusiae
G: silkworm (aka bombyx mori)
H: bombyx fusca (aka pygmaena fusca)
I: cabbage looper (aka trichoplusia ni)
J: trichocera nordica
K: None of the above. | [I; G] |
<Instruct>: Given the context 'We identified genes of these subfamilies expressed by the lepidopterans Trichoplusia ni and Bombyx mori.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [trichoplusia ni; bombyx mori]
<Options>: A: branchiomma bombyx (amphitrite bombyx) (aka branchiomma bombyx)
B: bombus jacobsoni (aka bombus lucorum)
C: trichormus naviculoides (anabaena naviculoides) (aka trichormus naviculoides)
D: trichoplusia ni granulosis virus (aka trichoplusia ni granulovirus)
E: bombus pomorum (bremus pomorum) (aka bombus pomorum)
F: trichocera
G: nostoc oryzae (anabaena oryzae) (aka nostoc oryzae)
H: wild silkworm (aka bombyx mandarina)
I: domestic silkworm (aka bombyx mori)
J: cabbage looper (aka trichoplusia ni)
K: None of the above. | [J; I] |
<Instruct>: Given the context 'The B. mori genome includes eight, six and 13 ABC-B, -C and -G genes, respectively, which encode P-glycoprotein, multidrug resistance protein, MRP, and breast cancer resistance protein, BCRP, homologues.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b. mori]
<Options>: A: bombus hortorum (apis hortorum) (aka bombus hortorum)
B: bombus morio (apis morio) (aka bombus morio)
C: bombyx bifida (aka furcula bifida)
D: silkworm (aka bombyx mori)
E: bombus koreanus (hortobombus koreanus) (aka bombus koreanus)
F: None of the above. | [D] |
<Instruct>: Given the context 'We have identified three ABC-B and two ABC-C T. ni genes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [t. ni]
<Options>: A: tinamotis
B: toxothrix trichogenes
C: nicotiana gossei
D: trichoplusia ni (cabbage looper) (aka trichoplusia ni)
E: theileria tsutsugamushi (aka orientia tsutsugamushi)
F: None of the above. | [D] |
<Instruct>: Given the context 'Analyses of the T. ni MRP (TrnMRP) revealed unique features, including the potential for TrnMRP4 hyperglycosylation and the alternative splicing of TrnMRP1.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [t. ni]
<Options>: A: trichophilus
B: triatoma nitida
C: trichoplusia ni (cabbage looper) (aka trichoplusia ni)
D: notothylas indica
E: trichonectria
F: None of the above. | [C] |
<Instruct>: Given the context 'Effects of Wolbachia on mtDNA variation and evolution in natural populations of Tetranychus urticae Koch.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tetranychus urticae]
<Options>: A: tetranychus merganser
B: brachypterus urticae
C: tetranychus tumidellus
D: tetranychus truncatus
E: red spider mite (aka tetranychus urticae)
F: None of the above. | [E] |
<Instruct>: Given the context 'The objective of this study was to identify the impact of nutrient enrichment on the diversity of the ciliate community associated with the roots of the aquatic macrophyte Eichhornia crassipes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [eichhornia crassipes]
<Options>: A: silene crassipes
B: pontederia crassipes (eichhornia crassipes (mart.) solms, 1883) (aka pontederia crassipes)
C: stellaria crassipes
D: amphiuca crassipes (aka paraleptuca crassipes)
E: hoya crassipes
F: None of the above. | [B] |
<Instruct>: Given the context 'Moreover, detrended correspondence analysis demonstrated that the ciliate community associated with E. crassipes roots changed significantly in response to the nutrient input in such a way that the species composition of the fertilized treatment was remarkably different from that of the control.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. crassipes]
<Options>: A: rhodophyllus crassipes (entoloma crassipes) (aka rhodophyllus crassipes)
B: nematus crassipes (aka euura crassipes)
C: echites crassipes
D: euphorbia crassipes
E: koeleria crassipes
F: None of the above. | [F] |
<Instruct>: Given the context 'El Nino in the warm tropics: local sea temperature predicts breeding parameters and growth of blue-footed boobies.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [blue-footed boobies]
<Options>: A: pedicularis bicolor
B: blue-footed booby (aka sula nebouxii)
C: silver flying fox (aka crossocheilus reticulatus)
D: tenebrio femoralis (aka pedinus femoralis)
E: boops boops (sparus boops) (aka boops boops)
F: None of the above. | [B] |
<Instruct>: Given the context 'Analysis of 18 years of breeding data from a colony of the blue-footed booby Sula nebouxii (Milne-Edwards) showed a delay in onset of breeding when the global Southern Oscillation Index was negative; each unit of the atmospheric pressure differential (hPa) across the Pacific Ocean meant a delay of 7 days.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [blue-footed booby; sula nebouxii]
<Options>: A: black-backed butcherbird (aka cracticus mentalis)
B: symphitoneuria neboissi
C: sejanus neboissi (aka ausejanus neboissi)
D: sulabanus brancuccii
E: little grey flycatcher (aka bradornis pumilus)
F: blue-breasted fairywren (aka malurus pulcherrimus)
G: bombyx flava (aka euproctis flava)
H: xyleborinus ntsoui
I: sula nebouxii (blue-footed booby) (aka sula nebouxii)
J: None of the above. | [I; I] |
<Instruct>: Given the context 'Analysis of 18 years of breeding data from a colony of the blue-footed booby Sula nebouxii (Milne-Edwards) showed a delay in onset of breeding when the global Southern Oscillation Index was negative; each unit of the atmospheric pressure differential (hPa) across the Pacific Ocean meant a delay of 7 days.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [blue-footed booby; sula nebouxii]
<Options>: A: bombyx flava (aka euproctis flava)
B: black-backed butcherbird (aka cracticus mentalis)
C: symphitoneuria neboissi
D: blue-breasted fairywren (aka malurus pulcherrimus)
E: little grey flycatcher (aka bradornis pumilus)
F: sulabanus brancuccii
G: sejanus neboissi (aka ausejanus neboissi)
H: xyleborinus ntsoui
I: None of the above. | [I; I] |
<Instruct>: Given the context 'Analysis of 18 years of breeding data from a colony of the blue-footed booby Sula nebouxii (Milne-Edwards) showed a delay in onset of breeding when the global Southern Oscillation Index was negative; each unit of the atmospheric pressure differential (hPa) across the Pacific Ocean meant a delay of 7 days.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [blue-footed booby; sula nebouxii]
<Options>: A: streptothrix brasiliensis (aka nocardia brasiliensis)
B: bombyx flava (aka euproctis flava)
C: slate-colored boubou (aka laniarius funebris)
D: neodevriesia scadoxi
E: sejanus neboissi (aka ausejanus neboissi)
F: blue-footed booby (aka sula nebouxii)
G: symphitoneuria neboissi
H: turtur afer (blue-spotted wood-dove) (aka turtur afer)
I: little grey flycatcher (aka bradornis pumilus)
J: None of the above. | [F; F] |
<Instruct>: Given the context 'Our findings extend evidence of impacts of ENSO on seabird reproduction to the eastern tropical Pacific and indicate that several breeding parameters of blue-footed boobies (but not egg size) are affected in the short term by ENSO conditions, particularly by local anomalies in sea surface temperature associated with decline in ocean productivity.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [blue-footed boobies]
<Options>: A: cattle egrets (aka bubulcus)
B: cattle egret (aka bubulcus ibis)
C: charops bicolor (agrypon bicolor) (aka charops bicolor)
D: rhinogobius fluviatilis
E: blue-footed booby (aka sula nebouxii)
F: None of the above. | [E] |
<Instruct>: Given the context 'Amnibacterium kyonggiense gen. nov., sp. nov., a new member of the family Microbacteriaceae.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [amnibacterium kyonggiense gen. nov., sp. nov.]
<Options>: A: amniculibacterium
B: amnibacterium flavum
C: amnibacterium kyonggiense
D: mycobacterium kyorinense
E: gorillibacterium massiliense
F: None of the above. | [C] |
<Instruct>: Given the context 'A Gram-positive, non-motile bacterium, designated KSL51201-037(T), was isolated from Anyang stream, Republic of Korea, and was characterized using a polyphasic taxonomic approach.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ksl51201-037(t)]
<Options>: A: staphylococcus aureus ltcf-15-62
B: small anellovirus kr-kd-0035
C: small anellovirus kr-ct-0048
D: lactista
E: small anellovirus kr-pn-0002p
F: None of the above. | [F] |
<Instruct>: Given the context 'Comparative 16S rRNA gene sequence analysis showed that strain KSL51201-037(T) belonged to the family Microbacteriaceae of the class Actinobacteria and exhibited 96.9 % gene sequence similarity to Labedella gwakjiensis KSW2-17(T), 96.0 % to Leifsonia ginsengi wged11(T) and 95.9 % to Microterricola viridarii KV-677(T).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ksl51201-037(t); labedella gwakjiensis ksw2-17(t); leifsonia ginsengi wged11(t); microterricola viridarii kv-677(t)]
<Options>: A: bacterium enrichment culture clone kse55-31
B: small anellovirus kr-ct-0040
C: branchinella kugenumaensis
D: halorosellinia krabiensis
E: microterricola viridarii
F: staphylococcus aureus ltcf-14-61
G: melissodes gilensis
H: staphylococcus aureus 2011-60-2275-7
I: leifsonia ginsengi (aka herbiconiux ginsengi)
J: labiobaetis sulawesiensis
K: microterricola gilva (phycicola gilvus) (aka microterricola gilva)
L: leifsonia poae
M: gladiolus monticola
N: halomonas daqingensis (aka billgrantia desiderata)
O: leifsonia virtsii
P: arvicola xanthognatha (aka microtus xanthognathus)
Q: winogradskyella helgolandensis
R: chrysotis viridigenalis (aka amazona viridigenalis)
S: small anellovirus kr-hc-0005
T: lysobacter ginsengisoli
U: None of the above. | [U; U; I; E] |
<Instruct>: Given the context 'Comparative 16S rRNA gene sequence analysis showed that strain KSL51201-037(T) belonged to the family Microbacteriaceae of the class Actinobacteria and exhibited 96.9 % gene sequence similarity to Labedella gwakjiensis KSW2-17(T), 96.0 % to Leifsonia ginsengi wged11(T) and 95.9 % to Microterricola viridarii KV-677(T).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ksl51201-037(t); labedella gwakjiensis ksw2-17(t); leifsonia ginsengi wged11(t); microterricola viridarii kv-677(t)]
<Options>: A: gladiolus monticola
B: microterricola gilva (phycicola gilvus) (aka microterricola gilva)
C: lactista
D: gilquinia robertsoni
E: thozetella boonjiensis
F: halorosellinia krabiensis
G: leifsonia soli
H: bacterium enrichment culture clone kse55-35
I: cloning vector gals_ksl
J: 'jiangella ginsengisoli' (aka jiangella ginsengisoli)
K: winogradskyella litorisediminis
L: gilibertia laurifolia (aka dendropanax laurifolius)
M: trochilus viridigula (aka anthracothorax viridigula)
N: microterricola viridarii
O: halomonas daqingensis (aka billgrantia desiderata)
P: microtus (terricola) subterraneus (aka microtus subterraneus)
Q: herbiconiux ginsengi (leifsonia ginsengi) (aka herbiconiux ginsengi)
R: lysobacter zhanggongensis
S: bacterium enrichment culture clone kse55-31
T: small anellovirus kr-kd-0034
U: None of the above. | [U; U; Q; N] |
<Instruct>: Given the context 'Comparative 16S rRNA gene sequence analysis showed that strain KSL51201-037(T) belonged to the family Microbacteriaceae of the class Actinobacteria and exhibited 96.9 % gene sequence similarity to Labedella gwakjiensis KSW2-17(T), 96.0 % to Leifsonia ginsengi wged11(T) and 95.9 % to Microterricola viridarii KV-677(T).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ksl51201-037(t); labedella gwakjiensis ksw2-17(t); leifsonia ginsengi wged11(t); microterricola viridarii kv-677(t)]
<Options>: A: herbiconiux ginsengi (leifsonia ginsengi) (aka herbiconiux ginsengi)
B: halomonas daqingensis (aka billgrantia desiderata)
C: lysobacter zhanggongensis
D: arvicola xanthognatha (aka microtus xanthognathus)
E: staphylococcus aureus ltcf-15-63
F: flavobacterium ginsengiterrae
G: gilibertia laurifolia (aka dendropanax laurifolius)
H: leifsonia kribbensis (aka pseudolysinimonas kribbensis)
I: staphylococcus aureus 2011-60-1490-31
J: arvicola subterraneus (aka microtus subterraneus)
K: microterricola viridarii
L: small anellovirus kr-kd-0035
M: halorosellinia krabiensis
N: diatrype lijiangensis
O: gilquinia robertsoni
P: mycterophora monticola
Q: small anellovirus kr-hc-0005
R: small anellovirus kr-ct-0048
S: winogradskyella helgolandensis
T: gladiolus monticola
U: None of the above. | [U; U; A; K] |
<Instruct>: Given the context 'Comparative 16S rRNA gene sequence analysis showed that strain KSL51201-037(T) belonged to the family Microbacteriaceae of the class Actinobacteria and exhibited 96.9 % gene sequence similarity to Labedella gwakjiensis KSW2-17(T), 96.0 % to Leifsonia ginsengi wged11(T) and 95.9 % to Microterricola viridarii KV-677(T).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ksl51201-037(t); labedella gwakjiensis ksw2-17(t); leifsonia ginsengi wged11(t); microterricola viridarii kv-677(t)]
<Options>: A: herbiconiux ginsengi (leifsonia ginsengi) (aka herbiconiux ginsengi)
B: mycterophora monticola
C: lauriliella taiwanensis
D: labiobaetis weifangae
E: tomato leaf curl karnataka alphasatellite
F: flindersia acuminata
G: microtus lavernedii (campagnol de lavernede) (aka microtus lavernedii)
H: gilquinia robertsoni
I: staphylococcus aureus 2011-60-1490-31
J: zhongshania guokunii
K: staphylococcus aureus ltcf-14-61
L: 'jiangella ginsengisoli' (aka jiangella ginsengisoli)
M: winogradskyella litorisediminis
N: small anellovirus kr-kd-0035
O: microtus (terricola) felteni (aka microtus felteni)
P: arvicola subterraneus (aka microtus subterraneus)
Q: leifsonia virtsii
R: microterricola viridarii
S: labiobaetis janae
T: bacterium enrichment culture clone kse55-35
U: None of the above. | [U; U; A; R] |
<Instruct>: Given the context 'Strain KSL51201-037(T) had l-2,4-diaminobutyric acid as the diagnostic cell-wall diamino acid, MK-11 and MK-12 as the major menaquinones, anteiso-C(15 : 0) (47.8 %) and iso-C(16 : 0) (24.0 %) as the major fatty acids and phosphatidylglycerol and three unknown phospholipids as the major polar lipids.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ksl51201-037(t)]
<Options>: A: cloning vector gals_ksl
B: small anellovirus kr-pn-0002p
C: tomato leaf curl karnataka alphasatellite
D: small anellovirus kr-pn-0003p
E: bacterium enrichment culture clone kse55-31
F: None of the above. | [F] |
<Instruct>: Given the context 'On the basis of phenotypic and genotypic properties and phylogenetic distinctiveness, it is suggested that strain KSL51201-037(T) represents a novel species of a new genus in the family Microbacteriaceae for which the name Amnibacterium kyonggiense gen. nov., sp. nov. is proposed.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ksl51201-037(t); amnibacterium kyonggiense gen. nov., sp. nov.]
<Options>: A: amniculibacterium aquaticum
B: mobilibacterium massiliense
C: small anellovirus kr-pn-0003p
D: amnibacterium flavum
E: bacterium enrichment culture clone kse55-35
F: small anellovirus kr-kd-0034
G: mycobacterium kyorinense
H: staphylococcus aureus 2011-60-2275-7
I: tomato leaf curl karnataka alphasatellite
J: amnibacterium kyonggiense
K: None of the above. | [J; J] |
<Instruct>: Given the context 'On the basis of phenotypic and genotypic properties and phylogenetic distinctiveness, it is suggested that strain KSL51201-037(T) represents a novel species of a new genus in the family Microbacteriaceae for which the name Amnibacterium kyonggiense gen. nov., sp. nov. is proposed.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ksl51201-037(t); amnibacterium kyonggiense gen. nov., sp. nov.]
<Options>: A: cloning vector pkos405-156
B: amnibacterium kyonggiense
C: amnibacterium sp. vn08a0400
D: polaribacter gangjinensis
E: staphylococcus aureus ltcf-15-62
F: staphylococcus aureus 2011-60-1490-31
G: small anellovirus kr-ct-0048
H: undibacterium jejuense
I: maliibacterium massiliense
J: small anellovirus kr-pn-0018p
K: None of the above. | [B; B] |
<Instruct>: Given the context 'The type strain of the type species is KSL51201-037(T) (=KEMC 51201-037(T)=JCM 16463(T)).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ksl51201-037(t)]
<Options>: A: staphylococcus aureus ltcf-15-62
B: staphylococcus aureus 2011-60-2275-7
C: small anellovirus kr-ct-0031
D: bacterium enrichment culture clone kse55-35
E: small anellovirus kr-kd-0034
F: None of the above. | [F] |
<Instruct>: Given the context 'Methanobacterium petrolearium sp. nov. and Methanobacterium ferruginis sp. nov., mesophilic methanogens isolated from salty environments.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [methanobacterium petrolearium sp. nov.; methanobacterium ferruginis sp. nov.]
<Options>: A: methanotrophic bacterium
B: methanobacterium formicicum
C: unidentified methanotrophic bacterium
D: methanobacterium veterum
E: methanobacterium petrolearium
F: methanobacterium oryzae
G: methanobacterium aridiramus
H: methanoplanus petrolearius (aka methanolacinia petrolearia)
I: flavobacterium ferrugineum (aka terrimonas ferruginea)
J: methanobacterium ferruginis
K: None of the above. | [E; J] |
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