instruction stringlengths 209 946 | input stringlengths 96 1.45k | response stringlengths 3 12 |
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<Instruct>: Given the context 'Strain GSW-R14(T) exhibited 97.6 % 16S rRNA gene sequence similarity to F. gelidilacus LMG 21477(T) and similarities of 91.2-95.2 % to other members of the genus Flavobacterium.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; f. gelidilacus]
<Options>: A: gossypium darwinii symptomless alphasatellite
B: fusarium ramigenum
C: gallegoides
D: flavobacterium gelidilacus
E: fusarium moniliforme (aka fusarium verticillioides)
F: gossypium darwinii symptomless virus
G: fusarium praegraminearum
H: gateway binary vector r4pgwb616
I: fusarium gossypinum
J: corn smut (aka mycosarcoma maydis)
K: None of the above. | [K; D] |
<Instruct>: Given the context 'Strain GSW-R14(T) contained MK-6 as the predominant menaquinone.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14]
<Options>: A: sorghum verticilliflorum (aka sorghum arundinaceum)
B: gas vacuolate str. 214.6
C: sarga stipoidea (aka sorghum stipoideum)
D: spodoptera frugiperda rhabdovirus
E: agrostidinae
F: None of the above. | [F] |
<Instruct>: Given the context 'The fatty acid profile of strain GSW-R14(T) was similar to that of F. gelidilacus LMG 21477(T).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; f. gelidilacus]
<Options>: A: gas vacuolate str. 214.6
B: fusarium graminum
C: fusarium ramigenum
D: corn smut (aka mycosarcoma maydis)
E: fusarium oryzicola
F: flavobacterium gelidilacus
G: barley straw oomycete gs-2
H: gateway binary vector r4pgwb516
I: fusarium nodosum
J: spodoptera frugiperda rhabdovirus
K: None of the above. | [K; F] |
<Instruct>: Given the context 'The fatty acid profile of strain GSW-R14(T) was similar to that of F. gelidilacus LMG 21477(T).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; f. gelidilacus]
<Options>: A: gateway binary vector r4pgwb516
B: corn smut (aka mycosarcoma maydis)
C: fusarium graminum
D: fusarium nodosum
E: fusarium ramigenum
F: gas vacuolate str. 214.6
G: spodoptera frugiperda rhabdovirus
H: fusarium oryzicola
I: barley straw oomycete gs-2
J: None of the above. | [J; J] |
<Instruct>: Given the context 'The fatty acid profile of strain GSW-R14(T) was similar to that of F. gelidilacus LMG 21477(T).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; f. gelidilacus]
<Options>: A: gallegoides
B: flavobacterium gelidilacus
C: fusarium acetilerea (aka fusicolla acetilerea)
D: sarga stipoidea (aka sorghum stipoideum)
E: fusarium moniliforme (aka fusarium verticillioides)
F: gateway binary vector pgwb14
G: fusarium fecundum
H: rhizobiaceae bacterium gws-bw-h42m
I: spodoptera frugiperda rhabdovirus
J: fusarium oryzicola
K: None of the above. | [K; B] |
<Instruct>: Given the context 'The DNA G+C content of strain GSW-R14(T) was 31.4 mol% and its DNA-DNA relatedness with F. gelidilacus LMG 21477(T)', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; f. gelidilacus]
<Options>: A: gossypium darwinii symptomless alphasatellite
B: fusarium oryzicola
C: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
D: fusarium rhizicola
E: gateway binary vector r4pgwb522
F: gallegoides
G: gateway binary vector r4pgwb716
H: rhizobiaceae bacterium gws-bw-h42m
I: flavobacterium gelidilacus
J: fusarium pseudograminearum
K: None of the above. | [K; I] |
<Instruct>: Given the context 'The DNA G+C content of strain GSW-R14(T) was 31.4 mol% and its DNA-DNA relatedness with F. gelidilacus LMG 21477(T)', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; f. gelidilacus]
<Options>: A: barley straw oomycete gs-2
B: fusarium ramigenum
C: corn smut (aka mycosarcoma maydis)
D: fusarium rhizicola
E: gateway binary vector r4pgwb716
F: flavobacterium gelidilacus
G: fusarium graminum
H: fusarium subflagellisporum
I: agrostidodinae
J: agrostidinae
K: None of the above. | [K; F] |
<Instruct>: Given the context 'Strain GSW-R14(T) could be distinguished from F. gelidilacus and the other species of the genus Flavobacterium by its phylogenetic and genetic distinctiveness and by several phenotypic properties.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; f. gelidilacus]
<Options>: A: sorghum verticilliflorum (aka sorghum arundinaceum)
B: fusarium terricola
C: flavobacterium gelidilacus
D: fusarium nodosum
E: fusarium solani f. phaseoli (aka fusarium phaseoli)
F: corn smut (aka mycosarcoma maydis)
G: agrostidinae
H: gateway binary vector pgwb14
I: fusarium gossypinum
J: gossypium hirsutum symptomless alphasatellite
K: None of the above. | [K; C] |
<Instruct>: Given the context 'Strain GSW-R14(T) could be distinguished from F. gelidilacus and the other species of the genus Flavobacterium by its phylogenetic and genetic distinctiveness and by several phenotypic properties.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; f. gelidilacus]
<Options>: A: fusarium temperatum
B: spodoptera frugiperda rhabdovirus
C: gateway binary vector r4pgwb716
D: fusarium gossypinum
E: flavobacterium gelidilacus
F: corn smut (aka mycosarcoma maydis)
G: fusarium curvatum
H: gossypium hirsutum symptomless alphasatellite
I: gossypium mustelinium symptomless alphasatellite
J: fusarium rhizicola
K: None of the above. | [K; E] |
<Instruct>: Given the context 'Strain GSW-R14(T) could be distinguished from F. gelidilacus and the other species of the genus Flavobacterium by its phylogenetic and genetic distinctiveness and by several phenotypic properties.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; f. gelidilacus]
<Options>: A: gossypium mustelinium symptomless alphasatellite
B: spodoptera frugiperda rhabdovirus
C: fusarium gossypinum
D: gateway binary vector r4pgwb716
E: gossypium hirsutum symptomless alphasatellite
F: fusarium rhizicola
G: corn smut (aka mycosarcoma maydis)
H: fusarium curvatum
I: fusarium temperatum
J: None of the above. | [J; J] |
<Instruct>: Given the context 'On the basis of these data, strain GSW-R14(T) is considered to represent a novel species of the genus Flavobacterium, for which the name Flavobacterium ponti sp. nov. is proposed; the type strain is GSW-R14(T)', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; flavobacterium ponti sp. nov.]
<Options>: A: rhizobiaceae bacterium gws-bw-h42m
B: flavobacterium vireti
C: flavobacterium enshiense
D: agrostidodinae
E: gateway binary vector r4pgwb516
F: flavobacterium ponti
G: gallegoides
H: flavobacterium magnum
I: flavobacterium aquaticum
J: gossypium mustelinium symptomless alphasatellite
K: None of the above. | [F; F] |
<Instruct>: Given the context 'On the basis of these data, strain GSW-R14(T) is considered to represent a novel species of the genus Flavobacterium, for which the name Flavobacterium ponti sp. nov. is proposed; the type strain is GSW-R14(T)', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [gsw-r14; flavobacterium ponti sp. nov.]
<Options>: A: flavobacterium paraogurii ('flavobacterium paraogurii') (aka flavobacterium paraogurii)
B: gossypium hirsutum symptomless alphasatellite
C: flavobacterium magnum
D: gateway binary vector pgwb14
E: flavobacterium gilvum
F: flavobacterium panacis
G: flavobacterium ponti
H: rhizobiaceae bacterium gws-bw-h42m
I: gas vacuolate str. 214.6
J: agrostidinae
K: None of the above. | [G; G] |
<Instruct>: Given the context 'Thermasporomyces composti gen. nov., sp. nov., a thermophilic actinomycete isolated from compost.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [thermasporomyces composti gen. nov., sp. nov.]
<Options>: A: thermasporomyces composti
B: tetramitus thermacidophilus
C: thermus composti
D: thermoactinomyces viridis (aka saccharomonospora viridis)
E: microstomum compositum (alaurina composita) (aka microstomum compositum)
F: None of the above. | [A] |
<Instruct>: Given the context 'Therefore, strain I3(T) represents a novel species in a new genus of the family Nocardioidaceae, for which the name Thermasporomyces composti gen. nov., sp. nov. is proposed.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [thermasporomyces composti gen. nov., sp. nov.]
<Options>: A: cellulomonas composti
B: thermaerobacter composti
C: thermasporomyces composti
D: parapedobacter composti
E: thermoactinomyces viridis (aka saccharomonospora viridis)
F: None of the above. | [C] |
<Instruct>: Given the context '(=JCM 16421(T)=DSM 22891(T)).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [jcm 16421(t)]
<Options>: A: flavobacteriaceae bacterium jj-1631
B: microbacteriaceae bacterium jcm 14692
C: flavobacteriaceae bacterium jj-1739
D: flexibacteraceae bacterium jj-1521
E: synemon jcaria
F: None of the above. | [F] |
<Instruct>: Given the context 'The DNA-DNA relatedness values of strain V2M29(T) to Phycicoccus dokdonensis DS-8(T) and Phycicoccus bigeumensis DSM 19264(T) were 32.5+/-3.3 % and 29.2+/-2.3 %, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [phycicoccus dokdonensis ds-8(t); phycicoccus bigeumensis dsm 19264(t)]
<Options>: A: phycicoccus badiiscoriae (aka pedococcus badiiscoriae)
B: deinococcus planocerae
C: porphyrobacter dokdonensis (aka erythrobacter dokdonensis)
D: phycicoccus avicenniae
E: deinococcus pimensis
F: phycicoccus dokdonensis (aka pedococcus dokdonensis)
G: synechococcus bigranulatus ccala 187 (aka thermosynechococcus vestitus ccala 187)
H: pedococcus bigeumensis (dastager et al. 2008) nouioui et al. 2018 (aka pedococcus bigeumensis)
I: polaribacter dokdonensis
J: synechococcus bigranulatus (aka thermostichus bigranulatus)
K: None of the above. | [F; H] |
<Instruct>: Given the context 'The DNA-DNA relatedness values of strain V2M29(T) to Phycicoccus dokdonensis DS-8(T) and Phycicoccus bigeumensis DSM 19264(T) were 32.5+/-3.3 % and 29.2+/-2.3 %, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [phycicoccus dokdonensis ds-8(t); phycicoccus bigeumensis dsm 19264(t)]
<Options>: A: deinococcus pimensis
B: phycicoccus badiiscoriae (aka pedococcus badiiscoriae)
C: synechococcus bigranulatus ccala 187 (aka thermosynechococcus vestitus ccala 187)
D: pseudoxanthomonas dokdonensis (stenotrophomonas dokdonensis) (aka pseudoxanthomonas dokdonensis)
E: phycicoccus endophyticus
F: deinococcus knuensis
G: pedococcus dokdonensis (phycicoccus dokdonensis) (aka pedococcus dokdonensis)
H: pedococcus bigeumensis (pedococcus bigeumensis (dastager et al. 2008) nouioui et al. 2018) (aka pedococcus bigeumensis)
I: leifsonia bigeumensis
J: deinococcus piscis
K: None of the above. | [G; H] |
<Instruct>: Given the context 'Opposing contributions of polynucleotide phosphorylase and the membrane protein NlpI to biofilm formation by Salmonella enterica serovar Typhimurium.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [salmonella enterica serovar typhimurium]
<Options>: A: salmonella enterica (salmonella enterica ser. choleraesuis) (aka salmonella enterica)
B: salmonella enterica serovar enteritidis (aka salmonella enterica subsp. enterica serovar enteritidis)
C: salmonella enterica serovar typhisuis (aka salmonella enterica subsp. enterica serovar typhisuis)
D: salmonella abortus (aka salmonella enterica subsp. enterica serovar abortus)
E: salmonella enterica serovar typhimurium (aka salmonella enterica subsp. enterica serovar typhimurium)
F: None of the above. | [A] |
<Instruct>: Given the context 'CsgD and cyclic-3',5'-di-guanylate are key regulators of biofilm formation in Salmonella enterica serovar Typhimurium.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [salmonella enterica serovar typhimurium]
<Options>: A: salmonella choleraesuis (aka salmonella enterica)
B: salmonella enterica serovar enteritidis (aka salmonella enterica subsp. enterica serovar enteritidis)
C: salmonella enterica serovar typhi (aka salmonella enterica subsp. enterica serovar typhi)
D: salmonella typhisuis (aka salmonella enterica subsp. enterica serovar typhisuis)
E: salmonella
F: None of the above. | [A] |
<Instruct>: Given the context 'We strongly advocate the need to strengthen social and policy frameworks to enable the implementation of interventions such as taxation on bidis (small hand-rolled cigarettes), smokeless tobacco, and locally brewed alcohols.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tobacco]
<Options>: A: nicotiana glauca (glaucous tobacco) (aka nicotiana glauca)
B: wild tobacco (aka nicotiana rustica)
C: nicotiana tabacum (american tobacco) (aka nicotiana tabacum)
D: ornamental tobacco (aka nicotiana alata)
E: nicotiana sylvestris (wood tobacco) (aka nicotiana sylvestris)
F: None of the above. | [C] |
<Instruct>: Given the context 'We propose the creation of the Integrated National Health System in India through provision of universal health insurance, establishment of autonomous organisations to enable accountable and evidence-based good-quality health-care practices and development of appropriately trained human resources, the restructuring of health governance to make it coordinated and decentralised, and legislation of health entitlement for all Indian people.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: humans (aka homo)
B: gymnopleurus humanus
C: homo sapiens (human) (aka homo sapiens)
D: human body louse (aka pediculus humanus corporis)
E: cardium humanum (aka glossus humanus)
F: None of the above. | [C] |
<Instruct>: Given the context 'We compared the frequency of cannibalism versus intraguild predation by adult predators of four species [the lady beetles Coccinella septempunctata L. and Hippodamia convergens Guerin-Meneville, and the predatory bugs Geocoris bullatus (Say) and Nabis alternatus Parshley] on the eggs of three predator species (all of these predators but Nabis).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [coccinella septempunctata l.; hippodamia convergens guerin-meneville; geocoris bullatus (say)]
<Options>: A: hypsibius convergens (macrobiotus convergens) (aka hypsibius convergens)
B: geocoris bullatus (salda bullata) (aka geocoris bullatus)
C: apiocera convergens
D: lophomyrtus bullata
E: convergent lady beetle (aka hippodamia convergens)
F: camellia septempetala
G: coccinella 7-punctata (aka coccinella septempunctata)
H: bolitogyrus bullatus (cyrtothorax bullatus) (aka bolitogyrus bullatus)
I: geocoris lapponicus
J: hercostomus convergens
K: geocoris dispar
L: coccinella septemmaculata (aka hippodamia septemmaculata)
M: coccinella septempunctata brucki
N: stenurella septempunctata
O: schistidium convergens
P: None of the above. | [G; E; B] |
<Instruct>: Given the context 'We compared the frequency of cannibalism versus intraguild predation by adult predators of four species [the lady beetles Coccinella septempunctata L. and Hippodamia convergens Guerin-Meneville, and the predatory bugs Geocoris bullatus (Say) and Nabis alternatus Parshley] on the eggs of three predator species (all of these predators but Nabis).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [coccinella septempunctata l.; hippodamia convergens guerin-meneville; geocoris bullatus (say)]
<Options>: A: coccinella decempunctata (aka adalia decempunctata)
B: hippodamia apicalis
C: hippodamia mutabilis (aka hippodamia variegata)
D: gladiolus bullatus
E: convergent lady beetle (aka hippodamia convergens)
F: chrysopa septempunctata
G: seven-spotted ladybird (aka coccinella septempunctata)
H: geophagus brachybranchus
I: phenax bullatus
J: salda bullata (aka geocoris bullatus)
K: coccinella septemmaculata (aka hippodamia septemmaculata)
L: coccinella septempunctata brucki
M: austrolippa convergens (hyperchiria convergens) (aka austrolippa convergens)
N: beckocoris bullatus (nevadocoris bullatus) (aka beckocoris bullatus)
O: hercostomus convergens
P: None of the above. | [G; E; J] |
<Instruct>: Given the context 'We compared the frequency of cannibalism versus intraguild predation by adult predators of four species [the lady beetles Coccinella septempunctata L. and Hippodamia convergens Guerin-Meneville, and the predatory bugs Geocoris bullatus (Say) and Nabis alternatus Parshley] on the eggs of three predator species (all of these predators but Nabis).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [coccinella septempunctata l.; hippodamia convergens guerin-meneville; geocoris bullatus (say)]
<Options>: A: macrobiotus convergens (aka hypsibius convergens)
B: geocoris lapponicus
C: coccinella decempunctata (aka adalia decempunctata)
D: trirhabda convergens
E: streptocarpus bullatus
F: geocolus caecus
G: coccinella undecimpunctata (eleven-spotted ladybird beetle) (aka coccinella undecimpunctata)
H: spathelia coccinea
I: hippodamia convergens (convergent lady beetle) (aka hippodamia convergens)
J: epilachna convergens
K: common bully (aka gobiomorphus cotidianus)
L: coccinella novemnotata
M: geocoris bullatus (salda bullata) (aka geocoris bullatus)
N: seven-spotted ladybird (aka coccinella septempunctata)
O: hippodamia mutabilis (aka hippodamia variegata)
P: None of the above. | [N; I; M] |
<Instruct>: Given the context 'In contrast, Geocoris eggs were generally more likely to be consumed by intraguild predators than by conspecifics.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [geocoris]
<Options>: A: geotrogus
B: geocoris
C: geocolus
D: geochus
E: geocharis <beetles> (geocharis) (aka geocharis <beetles>)
F: None of the above. | [F] |
<Instruct>: Given the context 'Closer inspection of the data revealed that Geocoris consistently consumed fewer eggs than the other species, regardless of egg species.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [geocoris]
<Options>: A: geocoris
B: geocharis (aka geocharis <beetles>)
C: geoxus
D: geocolus
E: geotrochus
F: None of the above. | [F] |
<Instruct>: Given the context 'Indeed, for lady beetle eggs it was relatively infrequent egg predation by Geocoris that brought down the average across all heterospecific predators, masking the fact that adults of the two lady beetles were no more likely to act as egg cannibals than as intraguild predators.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [geocoris]
<Options>: A: geocoris
B: geosiris
C: geobius
D: geobates (aka geositta)
E: geotrochus
F: None of the above. | [F] |
<Instruct>: Given the context 'Nabis ate eggs of the two beetles at approximately equal rates, but rarely ate Geocoris eggs.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [geocoris]
<Options>: A: geocolus
B: geograpsus
C: geotrogus
D: geocharis (aka geocharis <beetles>)
E: geocolaptes
F: None of the above. | [F] |
<Instruct>: Given the context 'Application of the systematic "DAmP" approach to create a partially defective C. albicans mutant.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. albicans]
<Options>: A: athletes albicans
B: fibroporia albicans
C: candona albicans (aka pseudocandona albicans)
D: syringospora albicans (aka candida albicans)
E: cyathopsis albicans (styphelia albicans) (aka cyathopsis albicans)
F: None of the above. | [D] |
<Instruct>: Given the context 'Functional analysis in Candida albicans, a major fungal pathogen, has generally included characterization of mutant strains with insertion or deletion alleles and over-expression alleles.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [candida albicans]
<Options>: A: athletes albicans
B: farigia albicans
C: saccharomyces albicans (aka candida albicans)
D: candona albicans (aka pseudocandona albicans)
E: fibroporia albicans
F: None of the above. | [C] |
<Instruct>: Given the context 'Functional analysis in Candida albicans, a major fungal pathogen, has generally included characterization of mutant strains with insertion or deletion alleles and over-expression alleles.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [candida albicans]
<Options>: A: fibroporia albicans
B: candona albicans (aka pseudocandona albicans)
C: athletes albicans
D: farigia albicans
E: None of the above. | [E] |
<Instruct>: Given the context 'Here we use in C. albicans another type of allele that has been employed effectively in the model yeast Saccharomyces cerevisiae, a "Decreased Abundance by mRNA Perturbation" (DAmP) allele (Yan et al., 2008).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. albicans; yeast; saccharomyces cerevisiae]
<Options>: A: ozoroa albicans
B: saccharomyces globosus (aka saccharomyces uvarum)
C: typhlocyba albicans
D: monilia albicans (aka candida albicans)
E: cataglyphis albicans (formica albicans) (aka cataglyphis albicans)
F: saccharomyces paradoxus
G: saccharomyces rouxii (aka zygosaccharomyces rouxii)
H: saccharomyces arboricola (saccharomyces arboricola f.y. bai & s.a. wang, 2008) (aka saccharomyces arboricola)
I: saccharomyces italicus (aka saccharomyces cerevisiae)
J: saccharomyces hansenii (aka debaryomyces hansenii)
K: athletes albicans
L: saccharomyces ovalis (aka malassezia furfur)
M: None of the above. | [D; I; I] |
<Instruct>: Given the context 'Here we use in C. albicans another type of allele that has been employed effectively in the model yeast Saccharomyces cerevisiae, a "Decreased Abundance by mRNA Perturbation" (DAmP) allele (Yan et al., 2008).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. albicans; yeast; saccharomyces cerevisiae]
<Options>: A: fibroporia albicans
B: saccharomyces hansenii (aka debaryomyces hansenii)
C: syringospora albicans (aka candida albicans)
D: saccharomyces albicans (aka candida albicans)
E: saccharomyces fermentati (aka torulaspora delbrueckii)
F: saccharomyces pasteurianus (aka saccharomyces pastorianus)
G: xylesthia albicans
H: saccharomyces ovalis (aka malassezia furfur)
I: saccharomyces drosophilarum (aka kluyveromyces lactis)
J: cataglyphis albicans (formica albicans) (aka cataglyphis albicans)
K: aerenica albicans (aka recchia albicans)
L: saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (aka saccharomyces cerevisiae)
M: None of the above. | [C; L; L] |
<Instruct>: Given the context 'Here we use in C. albicans another type of allele that has been employed effectively in the model yeast Saccharomyces cerevisiae, a "Decreased Abundance by mRNA Perturbation" (DAmP) allele (Yan et al., 2008).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. albicans; yeast; saccharomyces cerevisiae]
<Options>: A: saccharomyces italicus (aka saccharomyces cerevisiae)
B: athletes albicans
C: fibroporia albicans
D: ozoroa albicans
E: saccharomyces globosus (aka saccharomyces uvarum)
F: syringospora albicans (aka candida albicans)
G: saccharomyces lactis (aka kluyveromyces lactis)
H: xylesthia albicans
I: saccharomyces rouxii (aka zygosaccharomyces rouxii)
J: saccharomyces marxianus (aka kluyveromyces marxianus)
K: saccharomyces albicans (aka candida albicans)
L: None of the above. | [F; A; A] |
<Instruct>: Given the context 'Absence of well functioning health systems is indicated by the inadequacies related to planning, financing, human resources, infrastructure, supply systems, governance, information, and monitoring.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: hominidae (great apes) (aka hominidae)
B: homo sapiens (human) (aka homo sapiens)
C: neandertal man (aka homo sapiens neanderthalensis)
D: cardium humanum (aka glossus humanus)
E: gymnopleurus humanus
F: None of the above. | [B] |
<Instruct>: Given the context 'Absence of well functioning health systems is indicated by the inadequacies related to planning, financing, human resources, infrastructure, supply systems, governance, information, and monitoring.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: hominidae (great apes) (aka hominidae)
B: cardium humanum (aka glossus humanus)
C: gymnopleurus humanus
D: neandertal man (aka homo sapiens neanderthalensis)
E: None of the above. | [E] |
<Instruct>: Given the context 'The small GTPase BcCdc42 affects nuclear division, germination and virulence of the gray mold fungus Botrytis cinerea.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [botrytis cinerea]
<Options>: A: botrytis narcissicola (aka botryotinia narcissicola)
B: botryllus horridus
C: botrytis pseudocinerea
D: botrytis ficariarum (aka botryotinia ficariarum)
E: botryotinia fuckeliana (aka botrytis cinerea)
F: None of the above. | [E] |
<Instruct>: Given the context 'Whereas it is essential in the yeast Saccharomyces cerevisiae, its role in filamentous fungi differs, due to the complementing, partly overlapping function of Rac.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast; saccharomyces cerevisiae]
<Options>: A: saccharomyces marxianus (aka kluyveromyces marxianus)
B: saccharomyces oviformis (aka saccharomyces cerevisiae)
C: saccharomyces ovalis (aka malassezia furfur)
D: saccharomyces pasteurianus (aka saccharomyces pastorianus)
E: saccharomyces globosus (aka saccharomyces uvarum)
F: torulaspora hansenii (aka debaryomyces hansenii)
G: saccharomyces albicans (aka candida albicans)
H: saccharomyces lactis (aka kluyveromyces lactis)
I: None of the above. | [B; B] |
<Instruct>: Given the context 'Whereas it is essential in the yeast Saccharomyces cerevisiae, its role in filamentous fungi differs, due to the complementing, partly overlapping function of Rac.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast; saccharomyces cerevisiae]
<Options>: A: saccharomyces ovalis (aka malassezia furfur)
B: megasphaera cerevisiae
C: saccharomyces albicans (aka candida albicans)
D: saccharomyces paradoxus
E: saccharomyces oviformis (aka saccharomyces cerevisiae)
F: saccharomyces hansenii (aka debaryomyces hansenii)
G: saccharomyces lactis (aka kluyveromyces lactis)
H: saccharomyces fermentati (aka torulaspora delbrueckii)
I: None of the above. | [E; E] |
<Instruct>: Given the context 'We analyzed the role of the Cdc42 homologue in the necrotrophic, broad host range pathogen Botrytis cinerea.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [botrytis cinerea]
<Options>: A: botrytis nigra (aka virgaria nigra)
B: mycteria cinerea (tantalus cinereus) (aka mycteria cinerea)
C: botrytis porri (botryotinia porri) (aka botrytis porri)
D: botrytis cinerea (botryotinia fuckeliana) (aka botrytis cinerea)
E: botrytis pseudocinerea
F: None of the above. | [D] |
<Instruct>: Given the context 'Apart from these effects on vegetative growth and differentiation, Deltabccdc42 strains were attenuated in penetration and colonization of host tissue, confirming that BcCdc42 - though being not essential like in yeast - is involved in important developmental processes in B. cinerea.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast; b. cinerea]
<Options>: A: sabicea cinerea
B: saccharomyces rouxii (aka zygosaccharomyces rouxii)
C: donacia cinerea
D: bolitophila cinerea
E: saccharomyces ovalis (aka malassezia furfur)
F: alsodeia cinerea (aka rinorea cinerea)
G: baker's yeast (aka saccharomyces cerevisiae)
H: saccharomyces hansenii (aka debaryomyces hansenii)
I: saccharomyces arboricola (saccharomyces arboricola f.y. bai & s.a. wang, 2008) (aka saccharomyces arboricola)
J: botrytis cinerea (botryotinia fuckeliana) (aka botrytis cinerea)
K: None of the above. | [G; J] |
<Instruct>: Given the context 'Apart from these effects on vegetative growth and differentiation, Deltabccdc42 strains were attenuated in penetration and colonization of host tissue, confirming that BcCdc42 - though being not essential like in yeast - is involved in important developmental processes in B. cinerea.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast; b. cinerea]
<Options>: A: erica cinerea (bell-heather) (aka erica cinerea)
B: saccharomyces albicans (aka candida albicans)
C: saccharomyces lactis (aka kluyveromyces lactis)
D: abrocoma cinerea
E: donacia cinerea
F: porela cinerea (bombyx cinerea) (aka porela cinerea)
G: brewer's yeast (aka saccharomyces cerevisiae)
H: botrytis cinerea (botryotinia fuckeliana) (aka botrytis cinerea)
I: saccharomyces globosus (aka saccharomyces uvarum)
J: torulaspora hansenii (aka debaryomyces hansenii)
K: None of the above. | [G; H] |
<Instruct>: Given the context 'Apart from these effects on vegetative growth and differentiation, Deltabccdc42 strains were attenuated in penetration and colonization of host tissue, confirming that BcCdc42 - though being not essential like in yeast - is involved in important developmental processes in B. cinerea.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast; b. cinerea]
<Options>: A: saccharomyces globosus (aka saccharomyces uvarum)
B: erica cinerea (bell-heather) (aka erica cinerea)
C: abrocoma cinerea
D: donacia cinerea
E: torulaspora hansenii (aka debaryomyces hansenii)
F: saccharomyces lactis (aka kluyveromyces lactis)
G: saccharomyces albicans (aka candida albicans)
H: brewer's yeast (aka saccharomyces cerevisiae)
I: porela cinerea (bombyx cinerea) (aka porela cinerea)
J: None of the above. | [H; J] |
<Instruct>: Given the context 'Human resources for health in India.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: human louse (aka pediculus humanus)
B: human (aka homo sapiens)
C: macrobiotus sapiens
D: hominidae (great apes) (aka hominidae)
E: neandertal man (aka homo sapiens neanderthalensis)
F: None of the above. | [B] |
<Instruct>: Given the context 'India has a severe shortage of human resources for health.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: human (aka homo sapiens)
B: carcharhinus humani
C: neandertal man (aka homo sapiens neanderthalensis)
D: great apes (aka hominidae)
E: pediculus humanus corporis (pediculus humanus humanus) (aka pediculus humanus corporis)
F: None of the above. | [A] |
<Instruct>: Given the context 'A comprehensive national policy for human resources is needed to achieve universal health care in India.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: homo sapiens (human) (aka homo sapiens)
B: glossus humanus (cardium humanum) (aka glossus humanus)
C: sphaeria humana (aka sordaria humana)
D: pediculus humanus corporis (pediculus humanus humanus) (aka pediculus humanus corporis)
E: hominidae (great apes) (aka hominidae)
F: None of the above. | [A] |
<Instruct>: Given the context 'Such a policy might also encourage task-shifting and mainstreaming doctors and practitioners who practice traditional Indian medicine (ayurveda, yoga and naturopathy, unani, and siddha) and homoeopathy to work in these areas while adopting other innovative ways of augmenting human resources for health.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: human body louse (aka pediculus humanus corporis)
B: gymnopleurus humanus
C: homo sapiens (human) (aka homo sapiens)
D: homo (humans) (aka homo)
E: neandertal man (aka homo sapiens neanderthalensis)
F: None of the above. | [C] |
<Instruct>: Given the context 'Tuberculosis, malaria, filariasis, visceral leishmaniasis, leprosy, HIV infection, and childhood cluster of vaccine-preventable diseases are given priority for control through centrally managed vertical programmes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv]
<Options>: A: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
B: aids virus (aka human immunodeficiency virus)
C: human immunodeficiency virus type 1 (aka human immunodeficiency virus 1)
D: aids virus (aka human immunodeficiency virus 2)
E: None of the above. | [B] |
<Instruct>: Given the context 'Control of HIV infection and leprosy, but not of tuberculosis, seems to be on track.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv]
<Options>: A: aids virus (aka human immunodeficiency virus 2)
B: human immunodeficiency virus 3 (hiv (aka human immunodeficiency virus 3))
C: hiv-1 (aka human immunodeficiency virus 1)
D: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
E: None of the above. | [D] |
<Instruct>: Given the context 'Inadequate containment of the vector has resulted in recurrent outbreaks of dengue fever and re-emergence of Chikungunya virus disease and typhus fever.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikungunya virus]
<Options>: A: chiba virus
B: chiqui virus
C: chikungunya virus strain senegal 37997
D: chikungunya virus
E: canya virus
F: None of the above. | [D] |
<Instruct>: Given the context 'Other infectious diseases caused by faecally transmitted pathogens (enteric fevers, cholera, hepatitis A and E viruses) and zoonoses (rabies, leptospirosis, anthrax) are not in the process of being systematically controlled.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hepatitis a; e viruses]
<Options>: A: human hepatitis b virus (aka hepatitis b virus)
B: hepatitis a virus (aka hepatovirus a)
C: human echovirus
D: vee (aka venezuelan equine encephalitis virus) (aka venezuelan equine encephalitis virus)
E: cardiovirus e
F: equine torovirus
G: non-a, non-b hepatitis-associated virus (aka non-a, non-b hepatitis virus)
H: hepatitis b virus genotype a (hbv genotype a) (aka hepatitis b virus genotype a)
I: influenza a virus (human influenza a virus) (aka influenza a virus)
J: ed virus
K: None of the above. | [B; K] |
<Instruct>: Given the context 'Other infectious diseases caused by faecally transmitted pathogens (enteric fevers, cholera, hepatitis A and E viruses) and zoonoses (rabies, leptospirosis, anthrax) are not in the process of being systematically controlled.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hepatitis a; e viruses]
<Options>: A: hepatitis e virus (hepatitis e virus hev) (aka hepatitis e virus)
B: hepatitis b virus (human hepatitis b virus hbv) (aka hepatitis b virus)
C: equine encephalosis virus (equine encephalosis virus (eev)) (aka equine encephalosis virus)
D: equine coronavirus
E: equine influenza virus
F: hav (aka hepatovirus a) (aka hepatovirus a)
G: equine picobirnavirus
H: equine hepacivirus
I: human hepatitis a virus hav (aka human hepatitis a virus)
J: duck hepatitis a virus (aka avihepatovirus a)
K: None of the above. | [F; K] |
<Instruct>: Given the context 'Characterization of cross-reactive CD8+ T-cell recognition of HLA-A2-restricted HIV-Gag (SLYNTVATL) and HCV-NS5b (ALYDVVSKL) epitopes in individuals infected with human immunodeficiency and hepatitis C viruses.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human immunodeficiency; hepatitis c viruses]
<Options>: A: hiv (aka simian-human immunodeficiency virus) (aka simian-human immunodeficiency virus)
B: hcv (aka hepacivirus hominis) (aka hepacivirus hominis)
C: chimpanzee immunodeficiency virus (aka simian immunodeficiency virus)
D: hepatovirus c
E: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
F: hhav (aka human hepatitis a virus) (aka human hepatitis a virus)
G: human immunodeficiency virus type 1 (aka human immunodeficiency virus 1)
H: hepacivirus (hepatitis c-like viruses) (aka hepacivirus)
I: hepatitis b virus (hbv) (aka hepatitis b virus)
J: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
K: None of the above. | [J; B] |
<Instruct>: Given the context 'Characterization of cross-reactive CD8+ T-cell recognition of HLA-A2-restricted HIV-Gag (SLYNTVATL) and HCV-NS5b (ALYDVVSKL) epitopes in individuals infected with human immunodeficiency and hepatitis C viruses.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human immunodeficiency; hepatitis c viruses]
<Options>: A: human hepatitis c virus hcv (aka hepacivirus hominis)
B: biv (aka bovine immunodeficiency virus) (aka bovine immunodeficiency virus)
C: human hepatitis a virus (hhav (aka human hepatitis a virus))
D: hepatitis b virus hbv (aka hepatitis b virus)
E: hepatovirus c
F: siv (aka simian immunodeficiency virus) (aka simian immunodeficiency virus)
G: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
H: hepatitis c-like viruses (aka hepacivirus)
I: human immunodeficiency virus 1 (human immunodeficiency virus type 1, hiv-1) (aka human immunodeficiency virus 1)
J: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
K: None of the above. | [G; A] |
<Instruct>: Given the context 'The immunologic mechanisms underlying the faster progression of hepatitis C virus (HCV) disease in the presence of human immunodeficiency virus (HIV) coinfection are not clearly understood.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv; human immunodeficiency virus; hiv]
<Options>: A: aids virus (aka human immunodeficiency virus 1)
B: hcv-h (aka hepatitis c virus (isolate h))
C: aids virus (aka human immunodeficiency virus 2)
D: human hepatitis c virus (aka hepacivirus hominis)
E: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
F: hhav (aka human hepatitis a virus) (aka human hepatitis a virus)
G: human hepatitis circovirus
H: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
I: hiv (aka simian-human immunodeficiency virus) (aka simian-human immunodeficiency virus)
J: human immunodeficiency virus type 1 (aka human immunodeficiency virus 1)
K: hiv (aka human immunodeficiency virus 2) (aka human immunodeficiency virus 2)
L: hepatitis c virus (isolate japanese)
M: None of the above. | [D; H; H] |
<Instruct>: Given the context 'The immunologic mechanisms underlying the faster progression of hepatitis C virus (HCV) disease in the presence of human immunodeficiency virus (HIV) coinfection are not clearly understood.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv; human immunodeficiency virus; hiv]
<Options>: A: human immunodeficiency virus 3 (hiv (aka human immunodeficiency virus 3))
B: hiv (aka simian-human immunodeficiency virus) (aka simian-human immunodeficiency virus)
C: human immunodeficiency virus 1 hiv-1 (aka human immunodeficiency virus 1)
D: hepatitis c virus hcv (aka hepacivirus hominis)
E: aids virus (aka human immunodeficiency virus 2)
F: hepatitis c virus hcv-kf (hepatitis c virus (isolate hcv-kf)) (aka hepatitis c virus hcv-kf)
G: hepatitis c virus (isolate 1)
H: human immunodeficiency virus type-1 hiv-1 (aka human immunodeficiency virus 1)
I: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
J: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
K: hcv-h (aka hepatitis c virus (isolate h))
L: hepatitis c virus (isolate japanese)
M: None of the above. | [D; I; I] |
<Instruct>: Given the context 'The immunologic mechanisms underlying the faster progression of hepatitis C virus (HCV) disease in the presence of human immunodeficiency virus (HIV) coinfection are not clearly understood.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv; human immunodeficiency virus; hiv]
<Options>: A: hcv-hun (aka hepatitis c virus (isolate hunan))
B: aids virus (aka human immunodeficiency virus 2)
C: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
D: hepatitis c viruses (aka hepacivirus)
E: hiv1 (aka human immunodeficiency virus 1) (aka human immunodeficiency virus 1)
F: hiv-1 (aka human immunodeficiency virus 1)
G: hiv (aka simian-human immunodeficiency virus) (aka simian-human immunodeficiency virus)
H: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
I: hepatovirus c
J: human hepatitis c virus hcv (aka hepacivirus hominis)
K: human hepatitis circovirus
L: None of the above. | [J; C; C] |
<Instruct>: Given the context 'T-cell cross-reactivity between HCV and influenza virus-specific epitopes has been associated with rapid progression of HCV disease (S. Urbani, B. Amadei, P. Fisicaro, M. Pilli, G. Missale, A. Bertoletti, and C. Ferrari, J. Exp.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv]
<Options>: A: hepatovirus c
B: human hepatitis b virus (aka hepatitis b virus)
C: human hepatitis c virus (aka hepacivirus hominis)
D: hcv-h (aka hepatitis c virus (isolate h))
E: hepatitis c-like viruses (aka hepacivirus)
F: None of the above. | [C] |
<Instruct>: Given the context 'We asked whether T-cell cross-reactivity between HCV and HIV could exist during HCV/HIV coinfection and affect pathogenesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv; hcv]
<Options>: A: hepatitis c virus (isolate 1)
B: human immunodeficiency virus type i hiv-1 (aka human immunodeficiency virus 1)
C: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
D: aids virus (aka human immunodeficiency virus 2)
E: hepatitis c virus subtype 6v
F: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
G: human hepatitis circovirus
H: human hepatitis virus c hcv (aka hepacivirus hominis)
I: hepatovirus c
J: None of the above. | [C; H] |
<Instruct>: Given the context 'We asked whether T-cell cross-reactivity between HCV and HIV could exist during HCV/HIV coinfection and affect pathogenesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv; hcv]
<Options>: A: hepatovirus c
B: aids virus (aka human immunodeficiency virus 2)
C: human hepatitis b virus (aka hepatitis b virus)
D: human immunodeficiency virus type 1, hiv-1 (aka human immunodeficiency virus 1)
E: human immunodeficiency virus 3 (hiv (aka human immunodeficiency virus 3))
F: hcv (aka hepacivirus hominis) (aka hepacivirus hominis)
G: human hepatitis a virus (hhav (aka human hepatitis a virus))
H: hepatitis c virus (isolate 1)
I: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
J: None of the above. | [I; F] |
<Instruct>: Given the context 'Our search for amino acid sequence homology between the HCV and HIV proteomes revealed two similar HLA-A2-restricted epitopes, HIV-Gag (SLYNTVATL', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv]
<Options>: A: aids virus (aka human immunodeficiency virus 2)
B: aids virus (aka human immunodeficiency virus)
C: human immunodeficiency virus 1 hiv-1 (aka human immunodeficiency virus 1)
D: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
E: None of the above. | [B] |
<Instruct>: Given the context 'Our search for amino acid sequence homology between the HCV and HIV proteomes revealed two similar HLA-A2-restricted epitopes, HIV-Gag (SLYNTVATL', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv]
<Options>: A: aids virus (aka human immunodeficiency virus 2)
B: human immunodeficiency virus 1 hiv-1 (aka human immunodeficiency virus 1)
C: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
D: None of the above. | [D] |
<Instruct>: Given the context '[HIV-SL9]) and HCV-NS5b (ALYDVVSKL [HCV-AL9]).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv]
<Options>: A: human hepatitis circovirus
B: human hepatitis b virus (aka hepatitis b virus)
C: hcv-hun (aka hepatitis c virus (isolate hunan))
D: hepatitis c virus (isolate 1)
E: human hepatitis c virus hcv (aka hepacivirus hominis)
F: None of the above. | [E] |
<Instruct>: Given the context 'HIV-infected individuals had CD8(+) T cells that recognized both the HIV-SL9 and HCV-AL9 epitopes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv]
<Options>: A: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
B: aids virus (aka human immunodeficiency virus 2)
C: human immunodeficiency virus type 1 hiv 1 (aka human immunodeficiency virus 1)
D: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
E: None of the above. | [A] |
<Instruct>: Given the context 'Although HCV-monoinfected individuals in our study did not show AL9-specific responses, we found that about half of HCV/HIV-coinfected individuals had dual responses to both epitopes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv]
<Options>: A: aids virus (aka human immunodeficiency virus 2)
B: human immunodeficiency virus type 1 (aka human immunodeficiency virus 1)
C: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
D: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
E: None of the above. | [C] |
<Instruct>: Given the context 'This demonstrates that degeneracy of HIV-specific T cells may play a role in the immunopathology of HCV/HIV coinfection.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv; hiv]
<Options>: A: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
B: human hepatitis circovirus
C: aids virus (aka human immunodeficiency virus 2)
D: hepatitis c virus (isolate 1)
E: human immunodeficiency virus-1 hiv-1 (aka human immunodeficiency virus 1)
F: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
G: hhav (aka human hepatitis a virus) (aka human hepatitis a virus)
H: hepatitis c virus subtype 6v
I: human hepatitis c virus (aka hepacivirus hominis)
J: None of the above. | [I; F] |
<Instruct>: Given the context 'This demonstrates that degeneracy of HIV-specific T cells may play a role in the immunopathology of HCV/HIV coinfection.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv; hiv]
<Options>: A: hepatovirus c
B: aids virus (aka human immunodeficiency virus)
C: hepatitis c virus (aka hepacivirus hominis)
D: hepatitis c virus (isolate japanese)
E: hiv (aka human immunodeficiency virus 3) (aka human immunodeficiency virus 3)
F: human hepatitis b virus (aka hepatitis b virus)
G: hiv (aka human immunodeficiency virus 1) (aka human immunodeficiency virus 1)
H: human hepatitis circovirus
I: aids virus (aka human immunodeficiency virus 2)
J: None of the above. | [C; B] |
<Instruct>: Given the context '"Slime molds" among the Tubulinea (Amoebozoa): molecular systematics and taxonomy of Copromyxa.
Copromyxa protea is a dung-inhabiting amoeboid organism that aggregates to form simple macroscopic fruiting structures, sorocarps, which are composed of a single cell type.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [copromyxa protea]
<Options>: A: copromyxa protea
B: pero protea
C: aspidiotus proteus (aka parlatoria proteus)
D: coleophoma proteae
E: coleophora proterella
F: None of the above. | [A] |
<Instruct>: Given the context 'In a recent effort to find the phylogenetic positions of the less well-known sorocarpic protists considered to be "cellular slime molds," or aggregatively fruiting amoebae, we isolated C. protea and sequenced the nuclear-encoded small subunit ribosomal RNA gene from four samples collected from cattle farms in the central USA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. protea; cattle]
<Options>: A: bos (cattle) (aka bos)
B: carronia protensa
C: ruminococcus bovis
D: bovine (aka bos taurus)
E: indicine cattle (aka bos indicus)
F: protea
G: copromyxa protea
H: parlatoria proteus (aspidiotus proteus) (aka parlatoria proteus)
I: verconia protea (noumea protea gosliner, 1994) (aka verconia protea)
J: bos grunniens (bos mutus grunniens) (aka bos grunniens)
K: None of the above. | [G; D] |
<Instruct>: Given the context 'In a recent effort to find the phylogenetic positions of the less well-known sorocarpic protists considered to be "cellular slime molds," or aggregatively fruiting amoebae, we isolated C. protea and sequenced the nuclear-encoded small subunit ribosomal RNA gene from four samples collected from cattle farms in the central USA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. protea; cattle]
<Options>: A: protea
B: copromyxa protea
C: bos grunniens (bos mutus grunniens) (aka bos grunniens)
D: ruminococcus bovis
E: carronia protensa
F: verconia protea (noumea protea gosliner, 1994) (aka verconia protea)
G: indicine cattle (aka bos indicus)
H: bos (cattle) (aka bos)
I: parlatoria proteus (aspidiotus proteus) (aka parlatoria proteus)
J: None of the above. | [B; J] |
<Instruct>: Given the context 'In a recent effort to find the phylogenetic positions of the less well-known sorocarpic protists considered to be "cellular slime molds," or aggregatively fruiting amoebae, we isolated C. protea and sequenced the nuclear-encoded small subunit ribosomal RNA gene from four samples collected from cattle farms in the central USA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. protea; cattle]
<Options>: A: verconia protea (noumea protea gosliner, 1994) (aka verconia protea)
B: copromyxa protea
C: bos primigenius taurus (aka bos taurus)
D: crepidula protea
E: chlamydomonas proteus
F: domestic yak (aka bos grunniens)
G: bos bubalis bubalis (aka bubalus bubalis bubalis)
H: pero protea
I: zebu cattle (aka bos indicus)
J: bos bubalis (aka bubalus bubalis)
K: None of the above. | [B; C] |
<Instruct>: Given the context 'Phylogenetic analyses of these data place C. protea in the eukaryotic supergroup', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. protea]
<Options>: A: pero protea
B: crepidula protea
C: callidium proteus (aka meriellum proteus)
D: copromyxa protea
E: ascolepis protea (aka cyperus proteus)
F: None of the above. | [D] |
<Instruct>: Given the context 'In fact, Copromyxa protea is found to be very closely related to Hartmannella cantabrigiensis and to a since lost amoeba isolate, Hartmannella sp. 4/3Da/10.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [copromyxa protea; hartmannella cantabrigiensis; hartmannella sp. 4/3da/10]
<Options>: A: hartmanella sp. mtz (aka hartmannella sp. mtz)
B: hydroporus cantabricus
C: hartmannella sp. t3-1
D: hartmannella sp. 2 4/3da/10
E: veronica canterburiensis
F: hartmannella sp. jg-2012
G: crepidula protea
H: hymenaea protera
I: hartmannella cantabrigiensis (copromyxa cantabrigiensis) (aka hartmannella cantabrigiensis)
J: bartonella heixiaziensis
K: hartmannella sp. cohh 63
L: copromyxa protea
M: tryonia protea
N: pero protea
O: gahnia baniensis
P: None of the above. | [L; I; D] |
<Instruct>: Given the context 'In fact, Copromyxa protea is found to be very closely related to Hartmannella cantabrigiensis and to a since lost amoeba isolate, Hartmannella sp. 4/3Da/10.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [copromyxa protea; hartmannella cantabrigiensis; hartmannella sp. 4/3da/10]
<Options>: A: coleophora proterella
B: hartmannella sp. t3-3
C: heronidrilus fastigatus
D: bartonella heixiaziensis
E: hartmannella cantabrigiensis (copromyxa cantabrigiensis) (aka hartmannella cantabrigiensis)
F: hydroporus cantabricus
G: hartmannella sp. hclccof-001
H: copromyxa protea
I: veronica canterburiensis
J: hartmannella sp. 2 4/3da/10
K: coleophoma proteae
L: hartmannella sp. t5-4
M: ramularia proteae
N: ootheca proteus
O: hartmannella sp. t5-5
P: None of the above. | [H; E; J] |
<Instruct>: Given the context 'In fact, Copromyxa protea is found to be very closely related to Hartmannella cantabrigiensis and to a since lost amoeba isolate, Hartmannella sp. 4/3Da/10.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [copromyxa protea; hartmannella cantabrigiensis; hartmannella sp. 4/3da/10]
<Options>: A: hartmannella sp. v13
B: cladophialophora proteae (pseudocladosporium proteae) (aka cladophialophora proteae)
C: ramularia proteae
D: hartmannella sp. mbc_3h
E: copromyxa protea
F: leptura proteus (aka acmaeops proteus)
G: hartmannella sp.
H: junghuhnia carneola (aka geesterania carneola)
I: gramella echinicola (aka christiangramia echinicola)
J: ootheca proteus
K: pestalotia hartigii (aka truncatella hartigii)
L: hartmannella sp. t5-4
M: hartmannella cantabrigiensis (copromyxa cantabrigiensis) (aka hartmannella cantabrigiensis)
N: hartmannella sp. 2 4/3da/10
O: gahnia baniensis
P: None of the above. | [E; M; N] |
<Instruct>: Given the context 'This new grouping of Copromyxa+H. cantabrigiensis is sister to Glaeseria, which together are sister to the Amoebidae (Amoeba+Chaos).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [h. cantabrigiensis]
<Options>: A: hypericibacter terrae
B: helgardia herpotrichoides (aka oculimacula yallundae)
C: haematococcus zimbabwiensis (aka balticola zimbabwiensis)
D: copromyxa cantabrigiensis (aka hartmannella cantabrigiensis)
E: hydroporus cantabricus
F: None of the above. | [D] |
<Instruct>: Given the context 'We suggest renaming, H. cantabrigiensis as C. cantabrigiensis and designate isolate 4/3Da/10 as C. protea.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. cantabrigiensis; c. protea]
<Options>: A: copromyxa cantabrigiensis (aka hartmannella cantabrigiensis)
B: coleophora proterella
C: copromyxa protea
D: bathyscia cantabricus (aka quaestus cantabricus)
E: carronia protensa
F: pseudocladosporium proteae (aka cladophialophora proteae)
G: clonopsis gallica
H: pero protea
I: paragonimus caliensis
J: cryptocephalus cantabricus
K: None of the above. | [A; K] |
<Instruct>: Given the context 'We suggest renaming, H. cantabrigiensis as C. cantabrigiensis and designate isolate 4/3Da/10 as C. protea.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. cantabrigiensis; c. protea]
<Options>: A: clonopsis gallica
B: chlamydomonas proteus
C: pseudocladosporium proteae (aka cladophialophora proteae)
D: hartmannella cantabrigiensis (copromyxa cantabrigiensis) (aka hartmannella cantabrigiensis)
E: burmeistera chiriquiensis
F: veronica canterburiensis
G: parlatoria proteus (aspidiotus proteus) (aka parlatoria proteus)
H: trechus caliginis
I: ascolepis protea (aka cyperus proteus)
J: pero protea
K: None of the above. | [D; K] |
<Instruct>: Given the context 'Tuber melanosporum: mating type distribution in a natural plantation and dynamics of strains of different mating types on the roots of nursery-inoculated host plants.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum]
<Options>: A: french truffle (aka tuber melanosporum)
B: picoa melospora (aka tuber melosporum)
C: tuber polymorphosporum
D: glomus melanosporum
E: tuber melanorufum
F: None of the above. | [A] |
<Instruct>: Given the context 'In light of the recent finding that Tuber melanosporum, the ectomycorrhizal ascomycete that produces the most highly prized black truffles, is a heterothallic species, we monitored the spatial distribution of strains with opposite mating types (MAT) in a natural truffle ground and followed strain dynamics in artificially inoculated host plants grown under controlled conditions.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum; black truffles; truffle]
<Options>: A: tuber macrosporum
B: tillus
C: glomus melanosporum
D: burgundy truffle (aka tuber uncinatum)
E: tuber calosporum
F: lamia nigricornis (aka stibara nigricornis)
G: whitish truffle (aka tuber borchii)
H: gray truffle (aka tuber magnatum)
I: trugon terrestris
J: french truffle (aka tuber melanosporum)
K: tuber sphaerosporum
L: white piedmont truffle (aka tuber magnatum)
M: winter truffle (aka tuber brumale)
N: None of the above. | [J; J; J] |
<Instruct>: Given the context 'In light of the recent finding that Tuber melanosporum, the ectomycorrhizal ascomycete that produces the most highly prized black truffles, is a heterothallic species, we monitored the spatial distribution of strains with opposite mating types (MAT) in a natural truffle ground and followed strain dynamics in artificially inoculated host plants grown under controlled conditions.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum; black truffles; truffle]
<Options>: A: white truffle (aka tuber magnatum)
B: whitish truffle (aka tuber borchii)
C: triepeolus melanarius
D: tuber melanoexcavatum
E: chinese black truffle (aka tuber himalayense)
F: lamia nigricornis (aka stibara nigricornis)
G: monotagma tuberosum
H: black truffle (aka tuber melanosporum)
I: winter truffle (aka tuber brumale)
J: tuber xanthomonosporum
K: tuber himalayense (chinese black truffle) (aka tuber himalayense)
L: gray truffle (aka tuber magnatum)
M: truffles (aka tuber)
N: None of the above. | [H; H; H] |
<Instruct>: Given the context 'In light of the recent finding that Tuber melanosporum, the ectomycorrhizal ascomycete that produces the most highly prized black truffles, is a heterothallic species, we monitored the spatial distribution of strains with opposite mating types (MAT) in a natural truffle ground and followed strain dynamics in artificially inoculated host plants grown under controlled conditions.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum; black truffles; truffle]
<Options>: A: glomus melanosporum
B: tuber sphaerosporum
C: winter truffle (aka tuber brumale)
D: tuber melanorufum
E: lamia nigricornis (aka stibara nigricornis)
F: tillus
G: tuber calosporum
H: whitish truffle (aka tuber borchii)
I: tuber nigrum
J: black horsefly (aka tabanus atratus)
K: french truffle (aka tuber melanosporum)
L: summer truffle (aka tuber aestivum)
M: None of the above. | [K; K; K] |
<Instruct>: Given the context 'In a natural truffle ground, ectomycorrhizas (ECMs), soil samples and fruit bodies were sampled and genotyped to determine mating types.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [truffle]
<Options>: A: burgundy truffle (aka tuber uncinatum)
B: tillus
C: truffle symbionts
D: french truffle (aka tuber melanosporum)
E: trugon terrestris
F: None of the above. | [D] |
<Instruct>: Given the context 'The present study deepens our understanding of the vegetative and sexual propagation modes of T. melanosporum.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [t. melanosporum]
<Options>: A: trichoderma glaucum
B: trichosporon oryzae (aka moesziomyces antarcticus)
C: tuber melanorufum
D: perigord truffle (aka tuber melanosporum)
E: trichoderma album
F: None of the above. | [D] |
<Instruct>: Given the context 'These results are highly relevant for truffle cultivation.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [truffle]
<Options>: A: tillus
B: tuber suave
C: truffle symbionts
D: french truffle (aka tuber melanosporum)
E: whitish truffle (aka tuber borchii)
F: None of the above. | [D] |
<Instruct>: Given the context 'These results are highly relevant for truffle cultivation.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [truffle]
<Options>: A: tuber suave
B: tillus
C: truffle symbionts
D: whitish truffle (aka tuber borchii)
E: None of the above. | [E] |
<Instruct>: Given the context '2. We tested whether the house mouse (Mus domesticus), a model olfactory predator, would use cue context and spatial variability when searching for buried food items; specifically, we tested the effect of varying cue patchiness, odour strength, and cue-prey association on mouse foraging success.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [house mouse; mus domesticus; mouse]
<Options>: A: mus musculus (house mouse) (aka mus musculus)
B: mus macedonicus (macedonian mouse) (aka mus macedonicus)
C: mus molossinus (aka mus musculus molossinus)
D: mus famulus (servant mouse) (aka mus famulus)
E: mus spretus (mus musculus spretus) (aka mus spretus)
F: southeastern asian house mouse (aka mus musculus castaneus)
G: mus musculus domesticus (western european house mouse) (aka mus musculus domesticus)
H: mus glareolus (aka myodes glareolus)
I: western european house mouse (aka mus musculus domesticus)
J: mus musculus musculus (eastern european house mouse) (aka mus musculus musculus)
K: southwestern asian house mouse (aka mus musculus bactrianus)
L: mus domesticus (aka mus musculus domesticus)
M: None of the above. | [A; A; A] |
<Instruct>: Given the context '2. We tested whether the house mouse (Mus domesticus), a model olfactory predator, would use cue context and spatial variability when searching for buried food items; specifically, we tested the effect of varying cue patchiness, odour strength, and cue-prey association on mouse foraging success.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [house mouse; mus domesticus; mouse]
<Options>: A: mus musculus musculus (eastern european house mouse) (aka mus musculus musculus)
B: mus (aka mus <genus>) (aka mus <genus>)
C: mus musculus domesticus (western european house mouse) (aka mus musculus domesticus)
D: mus macedonicus (macedonian mouse) (aka mus macedonicus)
E: mus castaneus (aka mus musculus castaneus)
F: mus bella (aka mus musculoides)
G: mus famulus (servant mouse) (aka mus famulus)
H: japanese wild mouse (aka mus musculus molossinus)
I: mus cricetus (aka cricetus cricetus)
J: mus musculus (house mouse) (aka mus musculus)
K: western wild mouse (aka mus spretus)
L: mus terricolor (earth-colored mouse) (aka mus terricolor)
M: None of the above. | [J; J; J] |
<Instruct>: Given the context '2. We tested whether the house mouse (Mus domesticus), a model olfactory predator, would use cue context and spatial variability when searching for buried food items; specifically, we tested the effect of varying cue patchiness, odour strength, and cue-prey association on mouse foraging success.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [house mouse; mus domesticus; mouse]
<Options>: A: house mouse (aka mus musculus)
B: mus musculus domesticus (western european house mouse) (aka mus musculus domesticus)
C: mus agrarius (aka apodemus agrarius)
D: mus arvalis (aka microtus arvalis)
E: southwestern asian house mouse (aka mus musculus bactrianus)
F: mus terricolor (earth-colored mouse) (aka mus terricolor)
G: mus musculus musculus (eastern european house mouse) (aka mus musculus musculus)
H: mouse (aka mus <genus>)
I: mus molossinus (aka mus musculus molossinus)
J: western wild mouse (aka mus spretus)
K: mus domesticus (aka mus musculus domesticus)
L: mus <genus> (mice (aka mus <genus>))
M: mus macedonicus (macedonian mouse) (aka mus macedonicus)
N: None of the above. | [A; A; A] |
<Instruct>: Given the context 'Within mouse- and predator-proof enclosures, we created grids of 100 sand-filled Petri dishes and buried peanut pieces in a set number of these patches to represent visually cryptic 'prey'.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse; peanut]
<Options>: A: mus musculus (house mouse) (aka mus musculus)
B: arachis hypogaea (ground-nut) (aka arachis hypogaea)
C: western wild mouse (aka mus spretus)
D: ansola
E: southeastern asian house mouse (aka mus musculus castaneus)
F: eastern european house mouse (aka mus musculus musculus)
G: poa ramifera
H: phaseolus mollis
I: arachis glabrata (rhizoma peanut) (aka arachis glabrata)
J: mus molossinus (aka mus musculus molossinus)
K: None of the above. | [A; B] |
<Instruct>: Given the context 'Within mouse- and predator-proof enclosures, we created grids of 100 sand-filled Petri dishes and buried peanut pieces in a set number of these patches to represent visually cryptic 'prey'.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse; peanut]
<Options>: A: mus musculus (house mouse) (aka mus musculus)
B: hog-peanut (aka vigna subterranea)
C: mus terricolor (earth-colored mouse) (aka mus terricolor)
D: southeastern asian house mouse (aka mus musculus castaneus)
E: poa erinacea (aka nicoraepoa erinacea)
F: western wild mouse (aka mus spretus)
G: gibellia cerealis (aka gibellina cerealis)
H: western european house mouse (aka mus musculus domesticus)
I: peanut (aka arachis hypogaea)
J: arachis
K: None of the above. | [A; I] |
<Instruct>: Given the context 'By adding peanut oil to selected dishes, we varied the spatial distribution of prey odour relative to the distribution of prey patches in each grid, to reflect different levels of cue patchiness (Experiment 1), odour strength (Experiment 2) and cue-prey association (Experiment 3).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [peanut]
<Options>: A: poa erinacea (aka nicoraepoa erinacea)
B: arachis hypogaea (ground-nut) (aka arachis hypogaea)
C: pieris oleracea (pontia oleracea) (aka pieris oleracea)
D: pyralis aegusalis (aka gauna aegusalis)
E: poa ramifera
F: None of the above. | [B] |
<Instruct>: Given the context 'We measured the overnight foraging success of individual mice (percentage of searched patches containing prey), as well as their foraging activity (percentage of patches searched), and prey survival (percentage of unsearched prey patches).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mice]
<Options>: A: house mouse (aka mus musculus)
B: western european house mouse (aka mus musculus domesticus)
C: western wild mouse (aka mus spretus)
D: eastern european house mouse (aka mus musculus musculus)
E: mice (aka mus <genus>) (aka mus <genus>)
F: None of the above. | [A] |
<Instruct>: Given the context 'Mouse foraging success was highest where odour cues were patchy rather than uniform (Experiment 1), and where cues were tightly associated with prey location, rather than randomly or uniformly distributed (Experiment 3).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse]
<Options>: A: southeastern asian house mouse (aka mus musculus castaneus)
B: mus musculus (house mouse) (aka mus musculus)
C: mouse (aka mus <genus>)
D: mus macedonicus (macedonian mouse) (aka mus macedonicus)
E: mus musculus musculus (eastern european house mouse) (aka mus musculus musculus)
F: None of the above. | [B] |
<Instruct>: Given the context 'However, when cues at prey patches were ten times stronger than a uniformly distributed weak background odour, mice did not improve their foraging success over that experienced when cues were of uniform strength and distribution (Experiment 2).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mice]
<Options>: A: mus molossinus (aka mus musculus molossinus)
B: mice (aka mus sp.) (aka mus sp.)
C: mus musculus (house mouse) (aka mus musculus)
D: mus musculus musculus (eastern european house mouse) (aka mus musculus musculus)
E: mus californicus (aka peromyscus californicus)
F: None of the above. | [C] |
<Instruct>: Given the context '2. We studied the physiology of Song Wrens (Cyphorhinus phaeocephalus) across their geographical range on the isthmus of Panama, an area characterized by a strong rainfall gradient.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [song wrens; cyphorhinus phaeocephalus]
<Options>: A: corkwing wrasse (aka symphodus melops)
B: eastern winter wren (aka troglodytes hiemalis)
C: songar tit (aka poecile songarus)
D: cyphorhinus phaeocephalus
E: cyperus phaeolepis
F: cyphophthalmus duricorius
G: rhinoestrus phacochoeri
H: xerocomus phaeocephalus (aka boletus phaeocephalus)
I: western grasswren (aka amytornis textilis)
J: troglodytes musculus (tropical wren) (aka troglodytes musculus)
K: None of the above. | [D; D] |
<Instruct>: Given the context '2. We studied the physiology of Song Wrens (Cyphorhinus phaeocephalus) across their geographical range on the isthmus of Panama, an area characterized by a strong rainfall gradient.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [song wrens; cyphorhinus phaeocephalus]
<Options>: A: echinops phaeocephalus
B: song sparrow (aka melospiza melodia)
C: ixos phaeocephalus (aka alophoixus phaeocephalus)
D: cyphorhinus phaeocephalus
E: rufous-and-white wren (aka thryophilus rufalbus)
F: eurasian wren (aka troglodytes troglodytes)
G: cyphophthalmus duricorius
H: cyperus phaeolepis
I: common birdwing (aka troides helena)
J: musician wren (aka cyphorhinus arada)
K: None of the above. | [D; D] |
<Instruct>: Given the context 'Song Wrens are completely absent from the driest third of the isthmus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [song wrens]
<Options>: A: rufous-and-white wren (aka thryophilus rufalbus)
B: south island wren (aka xenicus gilviventris)
C: eastern winter wren (aka troglodytes hiemalis)
D: gryllus flavipes (aka mitius flavipes)
E: song sparrow (aka melospiza melodia)
F: None of the above. | [F] |
<Instruct>: Given the context 'SGT1 contributes to coronatine signaling and Pseudomonas syringae pv. tomato disease symptom development in tomato and Arabidopsis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [pseudomonas syringae pv. tomato; tomato]
<Options>: A: solanum sitiens
B: solanum taitense
C: solanum mammosum
D: pseudomonas syringae pv. avii
E: pseudomonas syringae lmc.p80
F: pseudomonas syringae pv. syringae (pseudomonas syringae (pv. syringae)) (aka pseudomonas syringae pv. syringae)
G: pseudomonas syringae (pseudomonas syringae subsp. syringae) (aka pseudomonas syringae)
H: solanum trifolium
I: pseudomonas syringae icmp 18806
J: lycopersicon esculentum (aka solanum lycopersicum)
K: None of the above. | [G; J] |
<Instruct>: Given the context 'SGT1 contributes to coronatine signaling and Pseudomonas syringae pv. tomato disease symptom development in tomato and Arabidopsis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [pseudomonas syringae pv. tomato; tomato]
<Options>: A: pseudomonas syringae subsp. syringae (aka pseudomonas syringae)
B: solanum trifolium
C: solanum dioicum
D: tomato (aka solanum lycopersicum)
E: pseudomonas syringae syringae (aka pseudomonas syringae pv. syringae)
F: pseudomonas syringae lmc.p80
G: pseudomonas syringae icmp 19498
H: solanum cornifolium
I: pseudomonas syringae pv. syringae sm
J: solanum taitense
K: None of the above. | [A; D] |
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