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GO

Dataset card Data Studio Files
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 Community
go_id
string
go_numeric_id
int64
name
string
namespace
string
definition
string
definition_xrefs
list
comment
string
synonyms
list
synonym_scopes
list
alt_ids
list
subsets
list
xrefs
list
is_a_ids
list
relationship_edges
list
relationship_types
list
relationship_target_ids
list
parent_ids
list
intersection_of
list
union_of
list
disjoint_from
list
replaced_by
list
consider
list
property_values
list
created_by
string
creation_date
string
is_obsolete
bool
in_go_basic
bool
split_bucket
int64
GO:0120170
120,170
intraciliary transport particle B binding
molecular_function
Binding to an intraciliary transport particle B (IFT B) complex.
[ "PMID:20889716" ]
null
[ "IFT B complex binding", "intraciliary transport complex B binding", "intraflagellar transport complex B binding", "intraflagellar transport particle B binding" ]
[ "RELATED", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0044877" ]
[]
[]
[]
[ "GO:0044877" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15771\" xsd:anyURI" ]
krc
2018-05-11T22:28:11Z
false
true
8
GO:0120171
120,171
Cdc24p-Far1p-Gbetagamma complex
cellular_component
A complex that forms at the cell cortex in response to pheromone treatment and is required for the polarized growth of haploid yeast cells towards a mating partner during yeast mating. In the yeast Saccharomyces cerevisiae, this complex consists of Cdc24p, Far1p, Ste4p (G-protein beta subunit) and Ste18p (G-protein gam...
[ "PMID:10087263" ]
null
[ "CDC24-FAR1-BG complex", "CDC24-FAR1-Gbetagamma complex", "Cdc24p-Far1p-BG complex" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0032991" ]
[]
[]
[]
[ "GO:0032991" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15801\" xsd:anyURI" ]
krc
2018-05-31T17:11:20Z
false
true
3
GO:0120174
120,174
stress-induced homeostatically regulated protein degradation pathway
biological_process
A stress-inducible protein catabolic pathway that promotes protein quality control by accelerating the degradation of misfolded ER membrane and cytosolic proteins, as well as native proteins. The pathway starts with the activation, by stress, of the Nma111p/Ynm3p serine protease, which cleaves the stress-induced hydrop...
[ "GOC:rl", "GOC:rn", "PMID:29861160" ]
Note, although the SHRED pathway may contain some components in common with ER-associated protein degradation (ERAD) pathways (GO:0036503), such as UBR1, RAD6 and CDC48, other ERAD components, such as HRD1 and DOA10 do not appear to be involved, and as such these pathways are currently considered to be distinct. ERAD p...
[ "SHRED pathway" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0033554", "GO:0042221", "GO:0043161" ]
[]
[]
[]
[ "GO:0033554", "GO:0042221", "GO:0043161" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15869\" xsd:anyURI" ]
krc
2018-06-07T16:16:43Z
false
true
8
GO:0120175
120,175
regulation of torso signaling pathway
biological_process
Any process that modulates the frequency, rate or extent of the torso signaling pathway.
[ "GOC:ha", "PMID:23732470" ]
null
[]
[]
[]
[]
[]
[ "GO:0009966" ]
[ "regulates GO:0008293" ]
[ "regulates" ]
[ "GO:0008293" ]
[ "GO:0008293", "GO:0009966" ]
[ "GO:0065007", "regulates GO:0008293" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15883\" xsd:anyURI" ]
krc
2018-06-07T16:47:42Z
false
true
4
GO:0120176
120,176
positive regulation of torso signaling pathway
biological_process
Any process that activates or increases the frequency, rate or extent of the torso signaling pathway.
[ "GOC:ha", "PMID:23732470" ]
null
[]
[]
[]
[]
[]
[ "GO:0009967", "GO:0120175" ]
[ "positively_regulates GO:0008293" ]
[ "positively_regulates" ]
[ "GO:0008293" ]
[ "GO:0008293", "GO:0009967", "GO:0120175" ]
[ "GO:0065007", "positively_regulates GO:0008293" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15883\" xsd:anyURI" ]
krc
2018-06-07T16:52:52Z
false
true
7
GO:0120177
120,177
negative regulation of torso signaling pathway
biological_process
Any process that stops, prevents, or reduces the frequency, rate or extent of the torso signaling pathway.
[ "GOC:ha", "PMID:23732470" ]
null
[]
[]
[]
[]
[]
[ "GO:0009968", "GO:0120175" ]
[ "negatively_regulates GO:0008293" ]
[ "negatively_regulates" ]
[ "GO:0008293" ]
[ "GO:0008293", "GO:0009968", "GO:0120175" ]
[ "GO:0065007", "negatively_regulates GO:0008293" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15883\" xsd:anyURI" ]
krc
2018-06-07T16:58:08Z
false
true
9
GO:0120178
120,178
steroid hormone biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of any steroid hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.
[ "GOC:krc", "GOC:nln" ]
null
[]
[]
[]
[]
[]
[ "GO:0006694" ]
[]
[]
[]
[ "GO:0006694" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16000\" xsd:anyURI" ]
krc
2019-05-20T22:34:00Z
false
true
2
GO:0120179
120,179
adherens junction disassembly
biological_process
The disaggregation of an adherens junction into its constituent components. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.
[ "GOC:aruk", "GOC:bc", "PMID:25490267" ]
null
[]
[]
[]
[]
[]
[ "GO:0034332", "GO:0150147" ]
[]
[]
[]
[ "GO:0034332", "GO:0150147" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15964\" xsd:anyURI" ]
krc
2018-07-12T17:29:56Z
false
true
9
GO:0120181
120,181
focal adhesion disassembly
biological_process
The disaggregation of a focal adhesion into its constituent components. A focal adhesion is a complex of intracellular signaling and structural proteins that provides a structural link between the internal actin cytoskeleton and the ECM, and also functions as a locus of signal transduction activity.
[ "PMID:25490267" ]
null
[]
[]
[]
[]
[]
[ "GO:0120180" ]
[]
[]
[]
[ "GO:0120180" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15964\" xsd:anyURI" ]
krc
2018-07-12T17:37:14Z
false
true
5
GO:0120182
120,182
regulation of focal adhesion disassembly
biological_process
Any process that modulates the frequency, rate or extent of disaggregation of a focal adhesion into its constituent components.
[ "PMID:25490267" ]
null
[]
[]
[]
[]
[]
[ "GO:0150116" ]
[ "regulates GO:0120181" ]
[ "regulates" ]
[ "GO:0120181" ]
[ "GO:0120181", "GO:0150116" ]
[ "GO:0065007", "regulates GO:0120181" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15964\" xsd:anyURI" ]
krc
2018-07-12T17:44:29Z
false
true
8
GO:0120184
120,184
negative regulation of focal adhesion disassembly
biological_process
Any process that stops, prevents, or reduces the frequency, rate or extent of a focal adhesion into its constituent components.
[ "PMID:25490267" ]
null
[]
[]
[]
[]
[]
[ "GO:0120182", "GO:0150118" ]
[ "negatively_regulates GO:0120181" ]
[ "negatively_regulates" ]
[ "GO:0120181" ]
[ "GO:0120181", "GO:0120182", "GO:0150118" ]
[ "GO:0065007", "negatively_regulates GO:0120181" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15964\" xsd:anyURI" ]
krc
2018-07-12T18:30:06Z
false
true
6
GO:0120186
120,186
negative regulation of protein localization to chromatin
biological_process
Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to chromatin.
[ "PMID:20889714", "PMID:29899453" ]
null
[ "negative regulation of protein localisation to chromatin" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:1903828", "GO:1905634" ]
[ "negatively_regulates GO:0071168" ]
[ "negatively_regulates" ]
[ "GO:0071168" ]
[ "GO:0071168", "GO:1903828", "GO:1905634" ]
[ "GO:0065007", "negatively_regulates GO:0071168" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16012\" xsd:anyURI" ]
krc
2018-07-14T00:19:32Z
false
true
7
GO:0120188
120,188
regulation of bile acid secretion
biological_process
Any process that modulates the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue.
[ "GOC:BHF", "GOC:BHF_miRNA", "GOC:rph", "PMID:22767443" ]
null
[]
[]
[]
[]
[]
[ "GO:0032890", "GO:0051046" ]
[ "regulates GO:0032782" ]
[ "regulates" ]
[ "GO:0032782" ]
[ "GO:0032782", "GO:0032890", "GO:0051046" ]
[ "GO:0065007", "regulates GO:0032782" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16040\" xsd:anyURI" ]
krc
2018-07-16T22:28:58Z
false
true
2
GO:0120190
120,190
negative regulation of bile acid secretion
biological_process
Any process that stops, prevents or reduces the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue.
[ "GOC:BHF", "GOC:BHF_miRNA", "GOC:rph", "PMID:22767443" ]
null
[]
[]
[]
[]
[]
[ "GO:0032891", "GO:0051048", "GO:0120188" ]
[ "negatively_regulates GO:0032782" ]
[ "negatively_regulates" ]
[ "GO:0032782" ]
[ "GO:0032782", "GO:0032891", "GO:0051048", "GO:0120188" ]
[ "GO:0065007", "negatively_regulates GO:0032782" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16040\" xsd:anyURI" ]
krc
2018-07-16T22:38:34Z
false
true
9
GO:0120191
120,191
negative regulation of termination of RNA polymerase II transcription
biological_process
Any process that stops, prevents or reduces the frequency, rate or extent of termination of RNA polymerase II transcription.
[ "GOC:krc", "GOC:vw", "PMID:29899453" ]
null
[ "down regulation of RNA 3'-end formation by RNA polymerase II", "down regulation of RNA polymerase II transcription termination", "down regulation of RNA polymerase II transcription termination factor activity", "down regulation of termination of RNA polymerase II transcription", "down regulation of transcr...
[ "EXACT", "EXACT", "RELATED", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "RELATED", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "RELATED", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "RELATED", "EXACT", "EXACT", "NARROW", "NARROW", "RELATED", "NARROW", "NARRO...
[]
[]
[]
[ "GO:0000122", "GO:0060567", "GO:1904594" ]
[ "negatively_regulates GO:0006369" ]
[ "negatively_regulates" ]
[ "GO:0006369" ]
[ "GO:0000122", "GO:0006369", "GO:0060567", "GO:1904594" ]
[ "GO:0065007", "negatively_regulates GO:0006369" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16096\" xsd:anyURI" ]
krc
2018-07-18T15:43:40Z
false
true
6
GO:0120192
120,192
tight junction assembly
biological_process
A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a tight junction. A tight junction seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.
[ "GOC:rl" ]
null
[ "occluding cell junction assembly", "occluding junction assembly" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0007043", "GO:0120193" ]
[]
[]
[]
[ "GO:0007043", "GO:0120193" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16187\" xsd:anyURI" ]
krc
2018-08-14T22:48:05Z
false
true
3
GO:0120193
120,193
tight junction organization
biological_process
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a tight junction. A tight junction seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.
[ "GOC:krc", "GOC:rl" ]
null
[ "occluding cell junction organization", "occluding junction organization" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0045216" ]
[]
[]
[]
[ "GO:0045216" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16187\" xsd:anyURI" ]
krc
2018-08-14T23:05:40Z
false
true
6
GO:0120194
120,194
regulation of anther dehiscence
biological_process
Any process involved in the dehiscence of an anther to release the pollen grains contained within it.
[ "GOC:lr", "PMID:30911018" ]
null
[]
[]
[]
[]
[]
[ "GO:2000241" ]
[ "regulates GO:0009901" ]
[ "regulates" ]
[ "GO:0009901" ]
[ "GO:0009901", "GO:2000241" ]
[ "GO:0065007", "regulates GO:0009901" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17128\" xsd:anyURI" ]
krc
2019-04-09T21:40:39Z
false
true
5
GO:0120195
120,195
positive regulation of anther dehiscence
biological_process
Any process that activates or increases the frequency, rate or extent of anther dehiscence.
[ "GOC:lr", "PMID:30911018" ]
null
[]
[]
[]
[]
[]
[ "GO:0120194", "GO:2000243" ]
[ "positively_regulates GO:0009901" ]
[ "positively_regulates" ]
[ "GO:0009901" ]
[ "GO:0009901", "GO:0120194", "GO:2000243" ]
[ "GO:0065007", "positively_regulates GO:0009901" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17128\" xsd:anyURI" ]
krc
2019-04-09T21:58:31Z
false
true
5
GO:0120198
120,198
positive regulation of imaginal disc-derived wing size
biological_process
Any process that increases the size of an imaginal disc-derived wing.
[ "GOC:ha", "PIMD:23485686" ]
null
[]
[]
[]
[]
[]
[ "GO:0044719" ]
[]
[]
[]
[ "GO:0044719" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17205\" xsd:anyURI" ]
krc
2019-04-30T21:47:06Z
false
true
1
GO:0120199
120,199
cone photoreceptor outer segment
cellular_component
The outer segment of a vertebrate cone photoreceptor that contains membrane discs that are contiguous with the ciliary membrane and containing opsin photoreceptor proteins.
[ "GOC:krc", "GOC:pde", "PMID:19501669", "PMID:26574505", "PMID:6771304" ]
null
[]
[]
[]
[]
[]
[ "GO:0001750" ]
[]
[]
[]
[ "GO:0001750" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17217\" xsd:anyURI" ]
krc
2019-05-07T22:23:28Z
false
true
2
GO:0120200
120,200
rod photoreceptor outer segment
cellular_component
The outer segment of a vertebrate rod photoreceptor that contains sealed membrane discs that are not connected to the ciliary membrane and containing rhodopsin photoreceptor proteins.
[ "GOC:krc", "GOC:pde", "PMID:19501669", "PMID:26574505", "PMID:6771304" ]
null
[]
[]
[]
[]
[]
[ "GO:0001750" ]
[]
[]
[]
[ "GO:0001750" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17217\" xsd:anyURI" ]
krc
2019-05-07T22:47:20Z
false
true
4
GO:0120201
120,201
cone photoreceptor disc membrane
cellular_component
Stack of disc membranes located inside a cone photoreceptor outer segment, and containing densely packed molecules of opsin photoreceptor proteins that traverse the lipid bilayer. Cone disc membranes arise as evaginations of the ciliary membrane during the development of the cone outer segment and remain contiguous wit...
[ "GOC:krc", "GOC:pde", "PMID:19501669", "PMID:26574505", "PMID:6771304" ]
null
[]
[]
[]
[]
[]
[ "GO:0060170", "GO:0097381" ]
[]
[]
[]
[ "GO:0060170", "GO:0097381" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17217\" xsd:anyURI" ]
krc
2019-05-07T23:17:43Z
false
true
1
GO:0120202
120,202
rod photoreceptor disc membrane
cellular_component
Stack of disc membranes located inside a rod photoreceptor outer segment, and containing densely packed molecules of rhodopsin photoreceptor proteins that traverse the lipid bilayer. It is thought that rod disc membranes arise as evaginations of the ciliary membrane near the base of the outer segment, which then become...
[ "GOC:krc", "GOC:pde", "PMID:19501669", "PMID:26574505", "PMID:6771304" ]
null
[]
[]
[]
[]
[]
[ "GO:0030659", "GO:0097381" ]
[]
[]
[]
[ "GO:0030659", "GO:0097381" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17217\" xsd:anyURI" ]
krc
2019-05-07T23:27:06Z
false
true
4
GO:0120203
120,203
rod photoreceptor disc lumen
cellular_component
The volume enclosed by the membrane of a rod photoreceptor cell disc membrane.
[ "GOC:krc", "GOC:pde", "PMID:19501669", "PMID:26574505", "PMID:6771304" ]
null
[]
[]
[]
[]
[]
[ "GO:0043233" ]
[ "part_of GO:0120200" ]
[ "part_of" ]
[ "GO:0120200" ]
[ "GO:0043233", "GO:0120200" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17217\" xsd:anyURI" ]
krc
2019-05-07T23:49:50Z
false
true
3
GO:0120204
120,204
methylcytosine to 5-glyceryl-methylcytosine dioxygenase activity
molecular_function
Catalysis of the reaction: methylcytosine + L-ascorbate + O2 = 5-glyceryl-methylcytosine + glyoxylate + CO2.
[ "PMID:31043749" ]
null
[]
[]
[]
[]
[ "RHEA:60132", "RHEA:60136" ]
[ "GO:0016705" ]
[]
[]
[]
[ "GO:0016705" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch RHEA:60132", "skos:narrowMatch RHEA:60136", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17267\" xsd:anyURI" ]
krc
2019-05-10T15:58:47Z
false
true
3
GO:0120205
120,205
photoreceptor proximal connecting cilium
cellular_component
The proximal region of the photoreceptor connecting cilium is similar to the transition zone of unspecialized primary cilia and houses several major transition zone complexes, including NPHP, MKS, and RPGR.
[ "GOC:krc", "PMID:29899041" ]
null
[ "PCC", "photoreceptor PCC" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[ "GO:0110165" ]
[ "part_of GO:0032391" ]
[ "part_of" ]
[ "GO:0032391" ]
[ "GO:0032391", "GO:0110165" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17273\" xsd:anyURI" ]
krc
2019-05-10T22:47:08Z
false
true
7
GO:0120206
120,206
photoreceptor distal connecting cilium
cellular_component
The distal region of the photoreceptor connecting cilium is structurally unique to the photoreceptor and is maintained by retina-specific protein, SPATA7, and its interacting partners RPGR and RPGRIP1. It is essential for photoreceptor sensory cilium stability.
[ "GOC:krc", "PMID:29899041" ]
null
[ "DCC", "photoreceptor DCC" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[ "GO:0110165" ]
[ "part_of GO:0032391" ]
[ "part_of" ]
[ "GO:0032391" ]
[ "GO:0032391", "GO:0110165" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17273\" xsd:anyURI" ]
krc
2019-05-10T22:54:05Z
false
true
5
GO:0120207
120,207
endocytosis, site selection
biological_process
The process of selecting and or marking the position where endocytosis will occur.
[ "GOC:vw", "PMID:30044717" ]
null
[]
[]
[]
[]
[]
[ "GO:1990778" ]
[ "part_of GO:0006897" ]
[ "part_of" ]
[ "GO:0006897" ]
[ "GO:0006897", "GO:1990778" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17315\" xsd:anyURI" ]
krc
2019-05-15T21:25:49Z
false
true
3
GO:0120208
120,208
telodendria
cellular_component
Telodendria are projections that originate from the axon pedicle and form gap junctions with other neurons.
[ "GOC:cvs", "GOC:krc", "PMID:11074451", "PMID:11506430", "PMID:14755521", "PMID:1646866", "PMID:20533354", "PMID:29127712", "PMID:451992", "PMID:8390352" ]
null
[]
[]
[]
[]
[]
[ "GO:0043005" ]
[]
[]
[]
[ "GO:0043005" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15769\" xsd:anyURI" ]
krc
2019-05-20T23:50:28Z
false
true
5
GO:0120209
120,209
cone telodendria
cellular_component
Cone telodendria are projections that originate from the cone pedicle and form gap junctions with other photoreceptors within the outer plexiform layer of the retina.
[ "GOC:cvs", "GOC:krc", "PMID:29127712" ]
null
[]
[]
[]
[]
[]
[ "GO:0120208" ]
[]
[]
[]
[ "GO:0120208" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15769\" xsd:anyURI" ]
krc
2019-05-21T00:01:34Z
false
true
5
GO:0120211
120,211
proacrosomal vesicle fusion
biological_process
Fusion of the membrane of proacrosomal vesicle with the membrane of another proacrosomal vesicle to form the acrosome.
[ "GOC:krc", "PMID:29991750" ]
null
[]
[]
[]
[]
[]
[ "GO:0006906" ]
[ "part_of GO:0001675" ]
[ "part_of" ]
[ "GO:0001675" ]
[ "GO:0001675", "GO:0006906" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17367\" xsd:anyURI" ]
krc
2019-05-22T17:12:55Z
false
true
9
GO:0120213
120,213
regulation of histidine biosynthetic process
biological_process
Any process that modulates the frequency, rate or extent of histidine biosynthetic process.
[ "GOC:krc" ]
null
[ "regulation of histidine anabolism", "regulation of histidine biosynthesis", "regulation of histidine formation", "regulation of histidine synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0062012", "GO:2000282" ]
[ "regulates GO:0000105" ]
[ "regulates" ]
[ "GO:0000105" ]
[ "GO:0000105", "GO:0062012", "GO:2000282" ]
[ "GO:0065007", "regulates GO:0000105" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17537\" xsd:anyURI" ]
krc
2019-06-27T20:55:42Z
false
true
8
GO:0120214
120,214
negative regulation of histidine biosynthetic process
biological_process
Any process that stops, prevents or reduces the frequency, rate or extent of histidine biosynthetic process.
[ "GOC:krc" ]
null
[ "down regulation of histidine anabolism", "down regulation of histidine biosynthesis", "down regulation of histidine biosynthetic process", "down regulation of histidine formation", "down regulation of histidine synthesis", "down-regulation of histidine anabolism", "down-regulation of histidine biosynth...
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0062014", "GO:0120213", "GO:2000283" ]
[ "negatively_regulates GO:0000105" ]
[ "negatively_regulates" ]
[ "GO:0000105" ]
[ "GO:0000105", "GO:0062014", "GO:0120213", "GO:2000283" ]
[ "GO:0065007", "negatively_regulates GO:0000105" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17537\" xsd:anyURI" ]
krc
2019-06-27T20:56:35Z
false
true
8
GO:0120215
120,215
positive regulation of histidine biosynthetic process
biological_process
Any process that activates or increases the frequency, rate or extent of histidine biosynthetic process.
[ "GOC:krc" ]
null
[ "activation of histidine anabolism", "activation of histidine biosynthesis", "activation of histidine biosynthetic process", "activation of histidine formation", "activation of histidine synthesis", "positive regulation of histidine anabolism", "positive regulation of histidine biosynthesis", "positiv...
[ "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0062013", "GO:0120213", "GO:2000284" ]
[ "positively_regulates GO:0000105" ]
[ "positively_regulates" ]
[ "GO:0000105" ]
[ "GO:0000105", "GO:0062013", "GO:0120213", "GO:2000284" ]
[ "GO:0065007", "positively_regulates GO:0000105" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17537\" xsd:anyURI" ]
krc
2019-06-27T20:57:28Z
false
true
6
GO:0120216
120,216
matrilin complex
cellular_component
A cartilage extracellular matrix complex that mediates interactions between major components of the extracellular matrix such as collagens and proteoglycans and contributes to their fibrillar network. Exists as an obligate homotrimer.
[ "PMID:10367731", "PMID:15075323", "PMID:29310791", "PMID:9699631" ]
null
[ "matrilin family complex", "matrilin-1 complex", "matrilin-2 complex", "matrilin-3 complex", "matrilin-4 complex" ]
[ "RELATED", "NARROW", "NARROW", "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0140392" ]
[ "part_of GO:0140149" ]
[ "part_of" ]
[ "GO:0140149" ]
[ "GO:0140149", "GO:0140392" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17598\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31067\" xsd:anyURI" ]
krc
2019-07-09T22:05:11Z
false
true
9
GO:0120217
120,217
DNA gyrase complex
cellular_component
A bacterial type IIA topoisomerase that is unique in its function of introducing negative supercoils into DNA at the expense of ATP hydrolysis and is also capable of relaxing positive supercoils, an activity shared with topoisomerase IV. Typically, it is composed of two copies each of an A subunit (GyrA) and a B subuni...
[ "GOC:bhm", "GOC:krc", "PMID:1657531", "PMID:20675723", "Wikipedia:DNA_gyrase" ]
null
[ "topoisomerase II complex" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0009330" ]
[]
[]
[]
[ "GO:0009330" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15575\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17736\" xsd:anyURI" ]
krc
2019-08-20T18:36:35Z
false
true
4
GO:0120218
120,218
host interaction involved in quorum sensing
biological_process
A quorum sensing process that is modulated by some interaction with a host cell or organism.
[ "GOC:krc", "GOC:mlg", "PMID:11780122", "PMID:16630813" ]
null
[]
[]
[]
[]
[]
[ "GO:0009372" ]
[]
[]
[]
[ "GO:0009372" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17757\" xsd:anyURI" ]
krc
2019-11-01T21:52:08Z
false
true
7
GO:0120219
120,219
subapical part of cell
cellular_component
The region of a polarized cell that is just below the apical region. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue so the subapical region is further from the exposed surface and closer to the b...
[ "GOC:krc", "PMID:29891944" ]
null
[ "subapical region of cell" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0110165" ]
[]
[]
[]
[ "GO:0110165" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18156\" xsd:anyURI" ]
krc
2019-11-15T17:08:22Z
false
true
7
GO:0120220
120,220
basal body patch
cellular_component
The region in the apical portion of multiciliated epithelial cells where the ciliary basal bodies cluster.
[ "GOC:krc", "PMID:20164345", "PMID:20685736", "PMID:29891944" ]
null
[ "centriolar patch" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0110165" ]
[ "part_of GO:0045177" ]
[ "part_of" ]
[ "GO:0045177" ]
[ "GO:0045177", "GO:0110165" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18156\" xsd:anyURI" ]
krc
2019-11-15T17:19:24Z
false
true
1
GO:0120222
120,222
regulation of blastocyst development
biological_process
Any process that modulates the frequency, rate or extent of blastocyst development.
[ "GOC:krc", "PMID:29593216" ]
null
[]
[]
[]
[]
[]
[ "GO:0050793" ]
[ "regulates GO:0001824" ]
[ "regulates" ]
[ "GO:0001824" ]
[ "GO:0001824", "GO:0050793" ]
[ "GO:0065007", "regulates GO:0001824" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18871\" xsd:anyURI" ]
krc
2020-02-17T19:59:20Z
false
true
5
GO:0120223
120,223
larynx morphogenesis
biological_process
The process in which the larynx is generated and organized. The larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration.
[ "GOC:krc", "PMID:28177282" ]
null
[ "laryngeal morphogenesis" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0009887" ]
[ "part_of GO:0120224" ]
[ "part_of" ]
[ "GO:0120224" ]
[ "GO:0009887", "GO:0120224" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18924\" xsd:anyURI" ]
krc
2020-02-22T01:42:04Z
false
true
3
GO:0120224
120,224
larynx development
biological_process
The biological process whose specific outcome is the progression of a larynx from an initial condition to its mature state. This process begins with the formation of the larynx and ends with the mature structure. A larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting t...
[ "GOC:krc", "PMID:28177282" ]
null
[]
[]
[]
[]
[]
[ "GO:0048513" ]
[ "part_of GO:0060541" ]
[ "part_of" ]
[ "GO:0060541" ]
[ "GO:0048513", "GO:0060541" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18924\" xsd:anyURI" ]
krc
2020-02-24T17:13:10Z
false
true
6
GO:0120225
120,225
coenzyme A binding
molecular_function
Binding to coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.
[ "GOC:krc", "ISBN:0198547684" ]
null
[ "CoA binding" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0043168", "GO:1901265", "GO:1901363", "GO:1901681" ]
[]
[]
[]
[ "GO:0043168", "GO:1901265", "GO:1901363", "GO:1901681" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19257\" xsd:anyURI" ]
krc
2020-05-06T18:22:56Z
false
true
8
GO:0120226
120,226
succinyl-CoA binding
molecular_function
Binding to succinyl-CoA, an omega-carboxyacyl-CoA having succinoyl as the S-acyl component.
[ "GOC:krc" ]
null
[ "succinyl-coenzyme A binding" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0120227" ]
[]
[]
[]
[ "GO:0120227" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19243\" xsd:anyURI" ]
krc
2020-05-19T15:51:32Z
false
true
2
GO:0120227
120,227
acyl-CoA binding
molecular_function
Binding to an acyl-CoA, a thioester that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any carboxylic acid.
[ "GOC:krc" ]
null
[ "acyl binding", "acyl-coenzyme A binding" ]
[ "BROAD", "EXACT" ]
[]
[]
[]
[ "GO:0043168", "GO:1901265", "GO:1901363", "GO:1901681" ]
[]
[]
[]
[ "GO:0043168", "GO:1901265", "GO:1901363", "GO:1901681" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19243\" xsd:anyURI" ]
krc
2020-05-19T16:06:24Z
false
true
5
GO:0120229
120,229
protein localization to motile cilium
biological_process
A process in which a protein is transported to, or maintained in, a location within a motile cilium.
[ "GOC:krc", "PMID:27486780" ]
null
[ "protein localization to nonmotile primary cilium" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0061512" ]
[]
[]
[]
[ "GO:0061512" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19588\" xsd:anyURI" ]
krc
2020-06-05T23:43:04Z
false
true
9
GO:0120230
120,230
recombinase activator activity
molecular_function
Binds to and increases the activity of a recombinase.
[ "GOC:mah", "PMID:32414915" ]
null
[]
[]
[]
[]
[]
[ "GO:0008047" ]
[]
[]
[]
[ "GO:0008047" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19555\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19631\" xsd:anyURI" ]
krc
2020-06-18T15:54:26Z
false
true
6
GO:0120231
120,231
DNA recombinase auxiliary factor complex
cellular_component
A protein complex that binds to a recombinase and incrseases its activity.
[ "PMID:32414915" ]
null
[ "DNA recombinase accessory factor complex", "DNA recombinase activator complex" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0150005" ]
[]
[]
[]
[ "GO:0150005" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19631\" xsd:anyURI" ]
krc
2020-06-18T16:12:52Z
false
true
3
GO:0120232
120,232
prenyl-FMNH2 biosynthetic process
biological_process
The chemical reactions and pathways resulting in prenyl-FMNH2, an essential cofactor for the decarboxylase enzymes UbiD and Fdc1.
[ "GOC:krc", "PMID:25647642", "PMID:26083743", "PMID:26083754" ]
null
[ "prenyl-FMNH2 anabolism", "prenyl-FMNH2 biosynthesis", "prenyl-FMNH2 formation", "prenyl-FMNH2 synthesis", "prenylated FMNH2 anabolism", "prenylated FMNH2 biosynthesis", "prenylated FMNH2 biosynthetic process", "prenylated FMNH2 formation", "prenylated FMNH2 synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWY0-1597" ]
[ "GO:0009156", "GO:0009260", "GO:0042727" ]
[]
[]
[]
[ "GO:0009156", "GO:0009260", "GO:0042727" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19244\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31634\" xsd:anyURI" ]
krc
2020-06-30T19:09:11Z
false
true
7
GO:0120233
120,233
prenyl-FMNH2 binding
molecular_function
Binding to prenyl-FMNH2, a flavin mononucleotide obtained by prenylation of the N-10 position of FMNH2 followed by cyclisation. An essential cofactor for the decarboxylase enzymes UbiD and Fdc1.
[ "GOC:krc", "PMID:25647642", "PMID:26083743", "PMID:26083754" ]
null
[ "prenylated FMNH2 binding" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0032553", "GO:0043168" ]
[]
[]
[]
[ "GO:0032553", "GO:0043168" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19244\" xsd:anyURI" ]
krc
2020-06-30T19:32:01Z
false
true
5
GO:0120234
120,234
stereocilium coat
cellular_component
A glycocalyx on the the endolymphatic surface of a cochlear hair cell that coats the external surface of each stereocilium and maintains a small distance between adjacent stereocilia in the bundle.
[ "GOC:krc", "ISBN:9781461268918", "PMID:31444330", "PMID:3583936" ]
null
[ "auditory hair cell glycocalyx", "stereocilium glycocalyx" ]
[ "BROAD", "EXACT" ]
[]
[]
[]
[ "GO:0030112" ]
[]
[]
[]
[ "GO:0030112" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19780\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19782\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31720\" xsd:anyURI" ]
krc
2020-07-15T00:56:35Z
false
true
1
GO:0120235
120,235
regulation of post-translational protein targeting to membrane, translocation
biological_process
Any process that modulates the frequency, rate or extent of posttranslational protein translocation through the ER membrane.
[ "GOC:krc", "GOC:rn", "PMID:32513868" ]
null
[ "regulation of N-terminal signal peptide-independent translocation into the ER", "regulation of posttranslational endoplasmic reticulum membrane protein translocation", "regulation of posttranslational protein targeting to membrane, translocation", "regulation of SRP-independent endoplasmic reticulum protein-...
[ "NARROW", "EXACT", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0033157", "GO:0034762" ]
[ "regulates GO:0031204" ]
[ "regulates" ]
[ "GO:0031204" ]
[ "GO:0031204", "GO:0033157", "GO:0034762" ]
[ "GO:0065007", "regulates GO:0031204" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19791\" xsd:anyURI" ]
krc
2020-08-03T16:46:15Z
false
true
3
GO:0120236
120,236
negative regulation of post-translational protein targeting to membrane, translocation
biological_process
Any process that stops, prevents or reduces the frequency, rate or extent of posttranslational protein translocation through the ER membrane.
[ "GOC:krc", "GOC:rn", "PMID:32513868" ]
null
[ "negative regulation of N-terminal signal peptide-independent translocation into the ER", "negative regulation of posttranslational endoplasmic reticulum membrane protein translocation", "negative regulation of posttranslational protein targeting to membrane, translocation", "negative regulation of SRP-indepe...
[ "NARROW", "EXACT", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0034763", "GO:0090317", "GO:0120235" ]
[ "negatively_regulates GO:0031204" ]
[ "negatively_regulates" ]
[ "GO:0031204" ]
[ "GO:0031204", "GO:0034763", "GO:0090317", "GO:0120235" ]
[ "GO:0065007", "negatively_regulates GO:0031204" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19791\" xsd:anyURI" ]
krc
2020-08-03T17:12:53Z
false
true
2
GO:0120237
120,237
obsolete terminal acetylenic compound biosynthetic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the formation of a terminal acetylenic compound, a compound which contains a terminal alkyne moiety in which a carbon of the carbon-carbon triple bond (aka C#C) moiety is attached to a hydrogen atom.
[ "DOI:10.1007/978-1-4615-4913-0_3", "GOC:krc" ]
This term was obsoleted because it is an unnecessary grouping class.
[ "terminal alkyne substituted compound anabolic process", "terminal alkyne substituted compound anabolism", "terminal alkyne substituted compound biosynthesis", "terminal alkyne substituted compound biosynthetic process", "terminal alkyne substituted compound synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17763\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
krc
2020-07-17T20:19:10Z
true
true
8
GO:0120239
120,239
vascular endothelial glycocalyx
cellular_component
The carbohydrate-rich layer lining the vascular endothelium connected to the endothelium through a variety of molecules, mainly proteoglycans and glycoproteins. These form a network in which soluble molecules, either plasma- or endothelium-derived, are incorporated.
[ "GOC:krc", "PMID:17256154" ]
null
[ "endothelial glycocalyx" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0030112" ]
[]
[]
[]
[ "GO:0030112" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19782\" xsd:anyURI" ]
krc
2020-07-27T21:55:41Z
false
true
6
GO:0120240
120,240
platelet glycocalyx
cellular_component
The carbohydrate rich layer at the outermost periphery of a platelet.
[ "GOC:krc", "PMID:24967889" ]
null
[]
[]
[]
[]
[]
[ "GO:0030112" ]
[]
[]
[]
[ "GO:0030112" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19782\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31720\" xsd:anyURI" ]
krc
2020-07-27T22:44:42Z
false
true
7
GO:0120241
120,241
2-iminobutanoate/2-iminopropanoate deaminase activity
molecular_function
Catalyzes the hydrolytic deamination of imine intermediates formed by several types of pyridoxal-5'-phosphate-dependent dehydratases, such as EC 4.3.1.19 and EC 4.3.1.17.
[ "EC:3.5.99.10" ]
This enzyme, which has been found in all species and tissues examined, catalyzes the hydrolytic deamination of imine intermediates formed by several types of pyridoxal-5'-phosphate-dependent dehydratases, such as EC 4.3.1.19 and EC 4.3.1.17. The reactions, which can occur spontaneously, are accelerated to minimize the ...
[ "2-iminobutanoate deaminase", "2-iminopropanoate deaminase", "enamine/imine deaminase", "imine intermediate deaminase activity" ]
[ "NARROW", "NARROW", "BROAD", "RELATED" ]
[]
[]
[ "EC:3.5.99.10" ]
[ "GO:0019239" ]
[]
[]
[]
[ "GO:0019239" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:3.5.99.10", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19832\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
krc
2020-07-29T17:28:19Z
false
true
9
GO:0120242
120,242
2-iminobutanoate deaminase activity
molecular_function
Catalysis of the reaction: 2-iminobutanoate + H2O = 2-oxobutanoate + NH4+.
[ "RHEA:39975" ]
null
[ "2-iminobutanoate/2-iminopropanoate deaminase" ]
[ "BROAD" ]
[]
[]
[ "KEGG_REACTION:R11098", "MetaCyc:RXN-15123", "Reactome:R-HSA-9014641 \"HRSP12 deaminates 2-iminobutanoate to 2OBUTA\"", "RHEA:39975" ]
[ "GO:0120241" ]
[]
[]
[]
[ "GO:0120241" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch RHEA:39975", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19832\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
krc
2020-07-29T18:07:00Z
false
true
1
GO:0120243
120,243
2-iminopropanoate deaminase activity
molecular_function
Catalysis of the reaction: 2-iminopropanoate + H2O = NH4+ + pyruvate.
[ "RHEA:40671" ]
null
[ "2-iminobutanoate/2-iminopropanoate deaminase" ]
[ "BROAD" ]
[]
[]
[ "KEGG_REACTION:R11099", "MetaCyc:RXN-15127", "RHEA:40671" ]
[ "GO:0120241" ]
[]
[]
[]
[ "GO:0120241" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch RHEA:40671", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19832\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
krc
2020-07-29T19:41:18Z
false
true
8
GO:0120244
120,244
obsolete terminal acetylenic compound metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving a terminal acetylenic compound, involving a terminal acetylenic compound, a compound which contains a terminal alkyne moiety in which which a carbon of the carbon-carbon triple bond (aka C#C) moiety is attached to a hydrogen atom.
[ "DOI:10.1007/978-1-4615-4913-0_3", "GOC:krc" ]
This term was obsoleted because it is an unnecessary grouping class.
[ "terminal alkyne substituted compound metabolic process", "terminal alkyne substituted compound metabolism" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19842\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
krc
2020-08-17T22:41:12Z
true
true
2
GO:0120246
120,246
obsolete acetylenic compound metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).
[ "DOI:10.1007/978-1-4615-4913-0_3", "GOC:krc" ]
This term was obsoleted because it is an unnecessary grouping class.
[ "alkyne substituted compound metabolic process", "alkyne substituted compound metabolism" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19842\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
krc
2020-08-18T00:54:23Z
true
true
8
GO:0120247
120,247
obsolete acetylenic compound biosynthetic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the formation of an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).
[ "DOI:10.1007/978-1-4615-4913-0_3", "GOC:krc" ]
This term was obsoleted because it is an unnecessary grouping class.
[ "alkyne substituted compound anabolic process", "alkyne substituted compound anabolism", "alkyne substituted compound biosynthesis", "alkyne substituted compound biosynthetic process", "alkyne substituted compound synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19842\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
krc
2020-08-18T01:02:36Z
true
true
7
GO:0120248
120,248
obsolete acetylenic compound catabolic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the breakdown of an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).
[ "DOI:10.1007/978-1-4615-4913-0_3", "GOC:krc" ]
This term was obsoleted because it is an unnecessary grouping class.
[ "alkyne substituted compound breakdown", "alkyne substituted compound catabolic process", "alkyne substituted compound catabolism", "alkyne substituted compound degradation" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19842\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
krc
2020-08-18T01:02:52Z
true
true
6
GO:0120249
120,249
lateral wall of outer hair cell
cellular_component
The lateral wall of an outer hair cell (OHC) is a unique trilaminate composite consisting of the plasma membrane, an underlying cytoskeletal network containing an actin-spectrin cortical lattice, and an adjacent system of circumferential lamellar organelles known as the subsurface cisternae.
[ "GOC:krc", "PMID:26352669", "PMID:31920560", "PMID:9412485" ]
null
[ "lateral wall of OHC", "OHC lateral wall", "outer hair cell lateral wall" ]
[ "RELATED", "RELATED", "EXACT" ]
[]
[]
[]
[ "GO:0097574" ]
[]
[]
[]
[ "GO:0097574" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19912\" xsd:anyURI" ]
krc
2020-08-27T23:53:44Z
false
true
4
GO:0120250
120,250
fatty acid omega-hydroxylase activity
molecular_function
Catalysis of the reaction: an omega-methyl fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an omega-hydroxy fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase].
[ "GOC:krc", "RHEA:39023" ]
null
[ "omega-hydroxylase activity" ]
[ "BROAD" ]
[]
[]
[ "RHEA:39023", "RHEA:40079" ]
[ "GO:0016712" ]
[]
[]
[]
[ "GO:0016712" ]
[]
[]
[]
[]
[]
[ "skos:broadMatch EC:1.14.15.3", "skos:exactMatch RHEA:39023", "skos:narrowMatch RHEA:40079", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19899\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24664\" xsd:anyURI", "term_tracker_item \"https:...
krc
2020-09-01T00:19:13Z
false
true
7
GO:0120251
120,251
hydrocarbon biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of a hydrocarbon, a compound consisting of carbon and hydrogen only.
[ "GOC:krc", "Wikipedia:Hydrocarbon" ]
null
[ "hydrocarbon anabolism", "hydrocarbon biosynthesis", "hydrocarbon formation", "hydrocarbon synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0009058", "GO:0120252" ]
[]
[]
[]
[ "GO:0009058", "GO:0120252" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19842\" xsd:anyURI" ]
krc
2020-09-02T20:35:53Z
false
true
2
GO:0120252
120,252
hydrocarbon metabolic process
biological_process
The chemical reactions and pathways involving a hydrocarbon, a compound consisting of carbon and hydrogen only.
[ "GOC:krc", "Wikipedia:Hydrocarbon" ]
null
[ "hydrocarbon metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0008152" ]
[]
[]
[]
[ "GO:0008152" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19842\" xsd:anyURI" ]
krc
2020-09-02T20:47:28Z
false
true
6
GO:0120253
120,253
hydrocarbon catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of a hydrocarbon, a compound consisting of carbon and hydrogen only.
[ "GOC:krc", "Wikipedia:Hydrocarbon" ]
null
[ "hydrocarbon breakdown", "hydrocarbon catabolism", "hydrocarbon degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0009056", "GO:0120252" ]
[]
[]
[]
[ "GO:0009056", "GO:0120252" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19842\" xsd:anyURI" ]
krc
2020-09-02T20:58:57Z
false
true
5
GO:0120255
120,255
olefinic compound biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of an olefinic compound, any compound which contains a carbon-carbon double bond (aka C=C).
[ "GOC:krc" ]
null
[ "alkene substituted compound anabolic process", "alkene substituted compound anabolism", "alkene substituted compound biosynthesis", "alkene substituted compound biosynthetic process", "alkene substituted compound synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0009058", "GO:0120254" ]
[]
[]
[]
[ "GO:0009058", "GO:0120254" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19936\" xsd:anyURI" ]
krc
2020-09-02T23:30:20Z
false
true
2
GO:0120256
120,256
olefinic compound catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of an olefinic compound, any compound which contains a carbon-carbon double bond (aka C=C).
[ "GOC:krc" ]
null
[ "alkene substituted compound breakdown", "alkene substituted compound catabolic process", "alkene substituted compound catabolism", "alkene substituted compound degradation" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0009056", "GO:0120254" ]
[]
[]
[]
[ "GO:0009056", "GO:0120254" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19936\" xsd:anyURI" ]
krc
2020-09-02T23:30:41Z
false
true
3
GO:0120257
120,257
peptidyl-threonine acetylation
biological_process
The acetylation of peptidyl-threonine.
[ "GOC:krc", "PMID:16728640", "PMID:22802624" ]
null
[]
[]
[]
[ "gocheck_obsoletion_candidate" ]
[]
[ "GO:0006473" ]
[]
[]
[]
[ "GO:0006473" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19957\" xsd:anyURI" ]
krc
2020-09-08T18:01:01Z
false
true
6
GO:0120258
120,258
peptidyl-threonine O-acetylation
biological_process
The acetylation of peptidyl-threonine to form peptidyl-O-acetyl-L-threonine.
[ "PMID:16728640", "PMID:22802624", "RESID:AA0423" ]
null
[]
[]
[]
[ "gocheck_obsoletion_candidate" ]
[ "RESID:AA0364" ]
[ "GO:0018210", "GO:0120257" ]
[]
[]
[]
[ "GO:0018210", "GO:0120257" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19957\" xsd:anyURI" ]
krc
2020-09-08T18:07:44Z
false
true
8
GO:0120259
120,259
7SK snRNP
cellular_component
A ribonucleoprotein complex that contains the 7SK snRNA. The 7SK snRNP plays a central role in RNA polymerase II elongation control by regulating the availability of active P-TEFb.
[ "PMID:18249148", "PMID:28431135" ]
null
[ "snRNP 7SK" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0030532" ]
[]
[]
[]
[ "GO:0030532" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19981\" xsd:anyURI" ]
krc
2020-09-15T22:01:31Z
false
true
5
GO:0120260
120,260
ciliary microtubule quartet
cellular_component
A set of four specialized microtubules that originates from the basal bodies and wraps around the ciliary pocket membrane, likely supporting its distinct flask shape.
[ "DOI:10.5772/66859", "GOC:ach", "GOC:krc", "PMID:19299460", "PMID:32518185" ]
Note that cilia and eukaryotic flagella are deemed to be equivalent. In diplomonad species, such as Giardia, the axoneme may extend intracellularly up to 5um away from the plane of the plasma membrane.
[ "ciliary MtQ" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0110165" ]
[ "has_part GO:0005874", "part_of GO:0005856", "part_of GO:0005929" ]
[ "has_part", "part_of", "part_of" ]
[ "GO:0005874", "GO:0005856", "GO:0005929" ]
[ "GO:0005856", "GO:0005874", "GO:0005929", "GO:0110165" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20035\" xsd:anyURI" ]
krc
2020-09-29T16:22:22Z
false
true
3
GO:0120261
120,261
regulation of heterochromatin organization
biological_process
Any process that modulates the frequency, rate, extent or location of heterochromatin organization.
[ "GOC:krc" ]
null
[]
[]
[]
[]
[]
[ "GO:1902275" ]
[ "regulates GO:0070828" ]
[ "regulates" ]
[ "GO:0070828" ]
[ "GO:0070828", "GO:1902275" ]
[ "GO:0065007", "regulates GO:0070828" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20020\" xsd:anyURI" ]
krc
2020-09-29T20:00:04Z
false
true
6
GO:0120262
120,262
negative regulation of heterochromatin organization
biological_process
Any process that stops, prevents, or reduces the frequency, rate or extent of heterochromatin organization.
[ "GOC:krc" ]
null
[ "down regulation of heterochromatin organization", "down-regulation of heterochromatin organization", "downregulation of heterochromatin organization", "inhibition of heterochromatin organization" ]
[ "EXACT", "EXACT", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0120261", "GO:1905268" ]
[ "negatively_regulates GO:0070828" ]
[ "negatively_regulates" ]
[ "GO:0070828" ]
[ "GO:0070828", "GO:0120261", "GO:1905268" ]
[ "GO:0065007", "negatively_regulates GO:0070828" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20020\" xsd:anyURI" ]
krc
2020-09-29T20:12:30Z
false
true
5
GO:0120263
120,263
positive regulation of heterochromatin organization
biological_process
Any process that activates or increases the frequency, rate or extent of heterochromatin organization.
[ "GOC:krc" ]
null
[ "activation of heterochromatin organization", "stimulation of heterochromatin organization", "up regulation of heterochromatin organization", "up-regulation of heterochromatin organization", "upregulation of heterochromatin organization" ]
[ "NARROW", "NARROW", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0120261", "GO:1905269" ]
[ "positively_regulates GO:0070828" ]
[ "positively_regulates" ]
[ "GO:0070828" ]
[ "GO:0070828", "GO:0120261", "GO:1905269" ]
[ "GO:0065007", "positively_regulates GO:0070828" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20020\" xsd:anyURI" ]
krc
2020-09-29T20:19:19Z
false
true
9
GO:0120264
120,264
regulation of chromosome attachment to the nuclear envelope
biological_process
Any process that modulates the frequency, rate, extent or location of chromosome attachment to the nuclear envelope.
[ "GOC:krc" ]
null
[]
[]
[]
[]
[]
[ "GO:0010564", "GO:0032879" ]
[ "regulates GO:0097240" ]
[ "regulates" ]
[ "GO:0097240" ]
[ "GO:0010564", "GO:0032879", "GO:0097240" ]
[ "GO:0065007", "regulates GO:0097240" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20020\" xsd:anyURI" ]
krc
2020-09-29T20:26:49Z
false
true
3
GO:0120265
120,265
negative regulation of chromosome attachment to the nuclear envelope
biological_process
Any process that stops, prevents, or reduces the frequency, rate or extent of the chromosome attachment to the nuclear envelope.
[ "GOC:krc" ]
null
[ "down regulation of chromosome attachment to the nuclear envelope", "down-regulation of chromosome attachment to the nuclear envelope", "downregulation of chromosome attachment to the nuclear envelope", "inhibition of chromosome attachment to the nuclear envelope" ]
[ "EXACT", "EXACT", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0010948", "GO:0120264" ]
[ "negatively_regulates GO:0097240" ]
[ "negatively_regulates" ]
[ "GO:0097240" ]
[ "GO:0010948", "GO:0097240", "GO:0120264" ]
[ "GO:0065007", "negatively_regulates GO:0097240" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20020\" xsd:anyURI" ]
krc
2020-09-29T20:30:32Z
false
true
2
GO:0120266
120,266
positive regulation of chromosome attachment to the nuclear envelope
biological_process
Any process that activates or increases the frequency, rate or extent of the chromosome attachment to the nuclear envelope.
[ "GOC:krc" ]
null
[ "activation of chromosome attachment to the nuclear envelope", "stimulation of chromosome attachment to the nuclear envelope", "up regulation of chromosome attachment to the nuclear envelope", "up-regulation of chromosome attachment to the nuclear envelope", "upregulation of chromosome attachment to the nuc...
[ "NARROW", "NARROW", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0090068", "GO:0120264" ]
[ "positively_regulates GO:0097240" ]
[ "positively_regulates" ]
[ "GO:0097240" ]
[ "GO:0090068", "GO:0097240", "GO:0120264" ]
[ "GO:0065007", "positively_regulates GO:0097240" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20020\" xsd:anyURI" ]
krc
2020-09-29T20:30:45Z
false
true
3
GO:0120267
120,267
pellicular membrane
cellular_component
The portion of the plasma membrane surrounding the pellicle, a structure enclosing some parasite cells such as certain apicomplexa and Euglenozoa. These membranes are associated with an infrastructure of microtubules, microfilaments, and other organelles.
[ "GOC:ach", "GOC:krc", "PMID:18095354", "PMID:30550896", "PMID:6993644", "PMID:7175771" ]
This sub-domain of the plasma membrane excludes the ciliary and ciliary pocket membranes.
[ "pellicle membrane", "pellicular plasma membrane" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0098590" ]
[ "part_of GO:0020039" ]
[ "part_of" ]
[ "GO:0020039" ]
[ "GO:0020039", "GO:0098590" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20034\" xsd:anyURI" ]
krc
2020-09-29T21:08:28Z
false
true
9
GO:0120268
120,268
paraflagellar rod assembly
biological_process
The aggregation, arrangement and bonding together of a set of components to form a paraflagellar rod, a large lattice-like axial structure found in some flagellated protists which extends alongside the axoneme.
[ "GOC:ach", "GOC:krc", "PMID:23787017", "PMID:32295845" ]
null
[ "paraflagellar rod biogenesis", "paraflagellar rod formation", "PFR assembly" ]
[ "EXACT", "EXACT", "RELATED" ]
[]
[]
[]
[ "GO:0044458" ]
[]
[]
[]
[ "GO:0044458" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20053\" xsd:anyURI" ]
krc
2020-09-30T17:46:14Z
false
true
6
GO:0120269
120,269
ciliary centrin arm
cellular_component
A rod-shaped protein complex containing Centrin4 protein that flanks the flagellum attachment zone (FAZ) filament and the quartet microtubules.
[ "GOC:ach", "GOC:krc", "PMID:26540076", "PMID:31217284" ]
Note that cilia and eukaryotic flagella are deemed to be equivalent. In diplomonad species, such as Giardia, the axoneme may extend intracellularly up to 5um away from the plane of the plasma membrane.
[]
[]
[]
[]
[]
[ "GO:0140535" ]
[ "part_of GO:0020016" ]
[ "part_of" ]
[ "GO:0020016" ]
[ "GO:0020016", "GO:0140535" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20062\" xsd:anyURI" ]
krc
2020-09-30T18:20:22Z
false
true
2
GO:0120270
120,270
regulation of nuclear mRNA surveillance of meiosis-specific transcripts
biological_process
Any process that modulates the rate, frequency, or extent of selective degradation of meiosis-specific nuclear transcribed transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
[ "GOC:krc", "PMID:24920274" ]
null
[ "regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0061013" ]
[ "regulates GO:0033621" ]
[ "regulates" ]
[ "GO:0033621" ]
[ "GO:0033621", "GO:0061013" ]
[ "GO:0065007", "regulates GO:0033621" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18757\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29246\" xsd:anyURI" ]
krc
2020-10-08T20:52:55Z
false
true
1
GO:0120271
120,271
negative regulation of nuclear mRNA surveillance of meiosis-specific transcripts
biological_process
Any process that stops, prevents or reduces the frequency, rate or extent of selective degradation of meiosis-specific nuclear transcribed transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
[ "GOC:krc", "PMID:24920274" ]
null
[ "negative regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0120270", "GO:1902373" ]
[ "negatively_regulates GO:0033621" ]
[ "negatively_regulates" ]
[ "GO:0033621" ]
[ "GO:0033621", "GO:0120270", "GO:1902373" ]
[ "GO:0065007", "negatively_regulates GO:0033621" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18757\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29246\" xsd:anyURI" ]
krc
2020-10-08T21:01:06Z
false
true
5
GO:0120272
120,272
positive regulation of nuclear mRNA surveillance of meiosis-specific transcripts
biological_process
Any process that activates or increases the frequency, rate or extent of degradation of meiosis-specific nuclear transcribed transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
[ "GOC:krc", "PMID:24920274" ]
null
[ "positive regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0061014", "GO:0120270" ]
[ "positively_regulates GO:0033621" ]
[ "positively_regulates" ]
[ "GO:0033621" ]
[ "GO:0033621", "GO:0061014", "GO:0120270" ]
[ "GO:0065007", "positively_regulates GO:0033621" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18757\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29246\" xsd:anyURI" ]
krc
2020-10-08T21:09:03Z
false
true
9
GO:0120273
120,273
ciliary centrin arm assembly
biological_process
The aggregation, arrangement and bonding together of a set of macromolecules to form a ciliary centrin arm, a rod-shaped protein complex containing Centrin4 protein that flanks the flagellum attachment zone (FAZ) filament and the quartet microtubules.
[ "GOC:ach", "GOC:krc", "PMID:32675283" ]
null
[ "ciliary centrin arm formation" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0065003" ]
[ "part_of GO:0060271" ]
[ "part_of" ]
[ "GO:0060271" ]
[ "GO:0060271", "GO:0065003" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20088\" xsd:anyURI" ]
krc
2020-10-08T23:01:46Z
false
true
3
GO:0120274
120,274
virus coreceptor activity
molecular_function
Combining with a virus component, and in cooperation with a nearby primary receptor, initiating a change in cell activity.
[ "GOC:ha", "GOC:krc", "PMID:16051304" ]
null
[ "viral coreceptor activity" ]
[ "EXACT" ]
[]
[ "goslim_generic" ]
[]
[ "GO:0140272" ]
[ "part_of GO:0046718" ]
[ "part_of" ]
[ "GO:0046718" ]
[ "GO:0046718", "GO:0140272" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20137\" xsd:anyURI" ]
krc
2020-10-20T18:32:45Z
false
true
5
GO:0120275
120,275
cerebral blood circulation
biological_process
The flow of blood through the network of arteries and veins supplying the cerebrum, enabling the transport of nutrients to the tissues and the removal of waste products.
[ "GOC:krc", "PMID:25397684" ]
null
[ "cerebrum blood circulation", "telencephelon blood circulation" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0008015" ]
[]
[]
[]
[ "GO:0008015" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20107\" xsd:anyURI" ]
krc
2020-10-20T19:13:51Z
false
true
2
GO:0120277
120,277
positive regulation of cerebral blood circulation
biological_process
Any process that activates or increases the frequency, rate or extent of cerebral blood circulation.
[ "GOC:krc", "PMID:25397684" ]
null
[ "activation of cerebral blood circulation", "positive regulation of cerebrum blood circulation", "positive regulation of telencephalon blood circulation", "up regulation of cerebral blood circulation", "up-regulation of cerebral blood circulation", "upregulation of cerebral blood circulation" ]
[ "NARROW", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0120276", "GO:1903524" ]
[ "positively_regulates GO:0120275" ]
[ "positively_regulates" ]
[ "GO:0120275" ]
[ "GO:0120275", "GO:0120276", "GO:1903524" ]
[ "GO:0065007", "positively_regulates GO:0120275" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20107\" xsd:anyURI" ]
krc
2020-10-21T06:55:42Z
false
true
5
GO:0120278
120,278
negative regulation of cerebral blood circulation
biological_process
Any process that stops, prevents or reduces the frequency, rate or extent of cerebral blood circulation.
[ "GOC:krc", "PMID:25397684" ]
null
[ "down regulation of cerebral blood circulation", "down-regulation of cerebral blood circulation", "downregulation of cerebral blood circulation", "inhibition of cerebral blood circulation", "negative regulation of cerebrum blood circulation", "negative regulation of telencephalon blood circulation" ]
[ "EXACT", "EXACT", "EXACT", "NARROW", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0120276", "GO:1903523" ]
[ "negatively_regulates GO:0120275" ]
[ "negatively_regulates" ]
[ "GO:0120275" ]
[ "GO:0120275", "GO:0120276", "GO:1903523" ]
[ "GO:0065007", "negatively_regulates GO:0120275" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20107\" xsd:anyURI" ]
krc
2020-10-21T07:02:05Z
false
true
2
GO:0120279
120,279
Z granule
cellular_component
A small cytoplasmic, non-membranous RNA/protein complex aggregate in the primordial germ cells that are distinct from, but colocalize with or are adjacent to, P granules and mutator foci and are associated with RNA metabolism. Z granules have been observed in C. elegans.
[ "GOC:dr", "GOC:krc", "PMID:29769721", "PMID:31378614", "PMID:32650583" ]
null
[ "germline granule" ]
[ "BROAD" ]
[]
[]
[]
[ "GO:0036464" ]
[ "part_of GO:0060293" ]
[ "part_of" ]
[ "GO:0060293" ]
[ "GO:0036464", "GO:0060293" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20108\" xsd:anyURI" ]
krc
2020-10-21T18:27:05Z
false
true
2
GO:0120280
120,280
ciliary pro-basal body
cellular_component
The cilary pro-basal body is an immature, partially assembled form of a ciliary basal body found next to the basal body of a cilium. Pro-basal bodies are not capable of nucleating a cilium. As the cell progresses through the cell cycle, continuing assembly will convert the pro-basal body into a mature basal body that i...
[ "ISBN:0198547684" ]
Pro-basal bodies are distinct from basal bodies as they are not at the base of a cilium and are not capable of nucleating a cilium. While immature, they contain some structures in common with the mature basal body and also may contain proteins unique to the immature state. Note that cilia and eukaryotic flagella are de...
[ "flagellar pro-basal body", "flagellar probasal body", "pro-basal body", "pro-centriole", "probasal body" ]
[ "EXACT", "EXACT", "BROAD", "BROAD", "BROAD" ]
[]
[]
[]
[ "GO:0110165" ]
[]
[]
[]
[ "GO:0110165" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/14963\" xsd:anyURI" ]
krc
2020-10-29T22:54:44Z
false
true
1
GO:0120281
120,281
autolysosome membrane
cellular_component
A lipid bilayer that surrounds an autolysosome, a single-membrane-bounded vesicle in which endogenous cellular material is degraded.
[ "GOC:krc", "GOC:nhn", "PMID:17182262", "PMID:24657946", "PMID:26382870", "PMID:32047650" ]
null
[]
[]
[]
[]
[]
[ "GO:0005765" ]
[ "part_of GO:0044754" ]
[ "part_of" ]
[ "GO:0044754" ]
[ "GO:0005765", "GO:0044754" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20239\" xsd:anyURI" ]
krc
2020-11-17T02:46:19Z
false
true
1
GO:0120282
120,282
autolysosome lumen
cellular_component
The volume that is enclosed within the autolysosome single-membrane.
[ "GOC:krc", "GOC:nhn", "PMID:17182262", "PMID:24657946", "PMID:26382870", "PMID:32047650" ]
null
[]
[]
[]
[]
[]
[ "GO:0005775" ]
[ "part_of GO:0044754" ]
[ "part_of" ]
[ "GO:0044754" ]
[ "GO:0005775", "GO:0044754" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20239\" xsd:anyURI" ]
krc
2020-11-17T02:53:51Z
false
true
5
GO:0120283
120,283
protein serine/threonine kinase binding
molecular_function
Binding to a protein serine/threonine kinase.
[ "GOC:krc", "GOC:sl", "PMID:28608965" ]
null
[]
[]
[]
[]
[]
[ "GO:0019901" ]
[]
[]
[]
[ "GO:0019901" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15218\" xsd:anyURI" ]
krc
2020-11-17T16:26:36Z
false
true
4
GO:0120284
120,284
tryptophan binding
molecular_function
Binding to 2-amino-3-(1H-indol-3-yl)propanoic acid.
[ "GOC:krc" ]
null
[ "Trp binding" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0016597", "GO:0031406", "GO:0043169", "GO:1901363" ]
[]
[]
[]
[ "GO:0016597", "GO:0031406", "GO:0043169", "GO:1901363" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20181\" xsd:anyURI" ]
krc
2020-11-18T01:04:19Z
false
true
2
GO:0120285
120,285
tyrosine sensor activity
molecular_function
Binding to and responding, e.g. by conformational change, to changes in the cellular level of tyrosine.
[ "GOC:krc", "PMID:31498992" ]
null
[ "tyrosine sensing activity" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0140785" ]
[ "has_part GO:0072545" ]
[ "has_part" ]
[ "GO:0072545" ]
[ "GO:0072545", "GO:0140785" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20181\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25267\" xsd:anyURI" ]
krc
2020-11-18T01:19:42Z
false
true
5
GO:0120286
120,286
tryptophan sensor activity
molecular_function
Binding to and responding, e.g. by conformational change, to changes in the cellular level of tryptophan.
[ "GOC:krc", "PMID:31498992" ]
null
[ "tryptophan sensing activity" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0140785" ]
[ "has_part GO:0120284" ]
[ "has_part" ]
[ "GO:0120284" ]
[ "GO:0120284", "GO:0140785" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20181\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25267\" xsd:anyURI" ]
krc
2020-11-18T01:25:01Z
false
true
6