LiteFold/InterPro · Datasets at Hugging Face

IPR059443

59,443

Domain of unknown function DUF8399

DUF8399

Domain

1,264

false

This domain is found in uncharacterised proteins mainly from fungi. It shares similarity with known ARM domains. It is frequently found next to an RRM domain.

[]

0

[ "PFAM" ]

[ "PF28440" ]

[ "DUF8399" ]

[ 1264 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Fungi" ]

[ 1264 ]

1

[ "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)" ]

[ 1 ]

1

true

Domain

Domain of unknown function DUF8399

DUF8399

8

IPR059444

59,444

Domain of unknown function DUF8400

DUF8400

Domain

1,272

false

This domain is found in uncharacterised eukaryotic proteins. It has significant similarity to known RRM domains and it is predicted to adopt similar structure.

[]

0

[ "PFAM" ]

[ "PF28442" ]

[ "DUF8400" ]

[ 1272 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Fungi" ]

[ 1272 ]

1

[ "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)" ]

[ 1 ]

1

true

Domain

Domain of unknown function DUF8400

DUF8400

2

IPR059445

59,445

Protein of unknown function DUF8401

DUF8401

Family

1,974

false

This entry represents a conserved cysteine-rich region found in uncharacterised metazoan proteins. The conserved cysteine residues are predicted to form disulfide bonds.

[]

0

[ "PFAM" ]

[ "PF28443" ]

[ "DUF8401" ]

[ 1974 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Metazoa" ]

[ 1974 ]

1

[]

0

true

Family

Protein of unknown function DUF8401

DUF8401

7

IPR059447

59,447

Domain of unknown function DUF8403

DUF8403

Domain

105

false

This domain is found in uncharacterised bacterial proteins. This domain is predicted to fold into a β-barrel structure which has topological similarity to domains members of Phage tail β-barrel superfamily.

[]

0

[ "PFAM" ]

[ "PF28445" ]

[ "DUF8403" ]

[ 105 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria" ]

[ 105 ]

1

[]

0

true

Domain

Domain of unknown function DUF8403

DUF8403

4

IPR059448

59,448

Domain of unknown function DUF8404

DUF8404

Domain

233

false

This domain is found in uncharacterised fungal proteins. It is predicted to adopt an α/βstructure with an unique topology. It contains several highly conserved histidine and aspartate residues that may be essential for function.

[]

0

[ "PFAM" ]

[ "PF28446" ]

[ "DUF8404" ]

[ 233 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "leotiomyceta" ]

[ 233 ]

1

[]

0

true

Domain

Domain of unknown function DUF8404

DUF8404

1

IPR059449

59,449

Domain of unknown function DUF8405

DUF8405

Domain

208

false

This domain is found in uncharacterised proteins from bacteria and eukaryotes. It is predicted to fold into an α/β structure composed of four-stranded antiparallel β-sheet with strand order 2341 and α helices packed on one face of the sheet. This domain contains two pair of highly conserved cysteine residues that are p...

[]

0

[ "PFAM" ]

[ "PF28464" ]

[ "DUF8405" ]

[ 208 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Actinomycetes", "Eukaryota" ]

[ 175, 33 ]

2

[]

0

true

Domain

Domain of unknown function DUF8405

DUF8405

8

IPR059450

59,450

Domain of unknown function DUF8406

DUF8406

Domain

270

false

This domain is found in uncharacterised fungal proteins. It is predicted to fold into an α/β structure composed of a curved β-sheet and α-helices packed on the concave side of it. It contains two highly conserved cysteine residues predicted to form disulfide bond. This domain is flanked by regions predicted as transmem...

[]

0

[ "PFAM" ]

[ "PF28465" ]

[ "DUF8406" ]

[ 270 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Pezizomycotina" ]

[ 270 ]

1

[ "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)" ]

[ 1 ]

1

true

Domain

Domain of unknown function DUF8406

DUF8406

6

IPR059451

59,451

Domain of unknown function DUF8407

DUF8407

Domain

48

false

This domain is found in uncharacterised fungal proteins. It is predicted to adopt a non-compact α-helical structure.

[]

0

[ "PFAM" ]

[ "PF28466" ]

[ "DUF8407" ]

[ 48 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Serinales" ]

[ 48 ]

1

[]

0

true

Domain

Domain of unknown function DUF8407

DUF8407

9

IPR059452

59,452

Domain of unknown function DUF8408

DUF8408

Domain

14

false

This domain is found in uncharacterised proteins mainly from Actinomycetes. It contains highly conserved cysteine and histidine residues that may be involved in metal coordination.

[]

0

[ "PFAM" ]

[ "PF28467" ]

[ "DUF8408" ]

[ 14 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Micrococcaceae" ]

[ 14 ]

1

[]

0

true

Domain

Domain of unknown function DUF8408

DUF8408

2

IPR059453

59,453

Domain of unknown function DUF8409

DUF8409

Domain

43

false

This domain is found in uncharacterised bacterial proteins. It contains conserved RxDxDxxYY sequence motif which may be important for function.

[]

0

[ "PFAM" ]

[ "PF28468" ]

[ "DUF8409" ]

[ 43 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Clostridia" ]

[ 43 ]

1

[]

0

true

Domain

Domain of unknown function DUF8409

DUF8409

3

IPR059454

59,454

Domain of unknown function DUF8410

DUF8410

Domain

740

false

This domain is found in a group of uncharacterised proteins mainly found in actinomycetes. This domain, which contains highly conserved W, D, G residues and a conserved motif FxHRHR, is predicted to form an antiparallel β sheet and α helices. Bet_v_1 domains contain a hydrophobic ligand-binding pocket [ ]. The specific...

[]

0

[ "PFAM" ]

[ "PF28469" ]

[ "DUF8410" ]

[ 740 ]

1

[]

0

[]

0

[ "PUB00053295" ]

[ "18922149" ]

[ "The Bet v 1 fold: an ancient, versatile scaffold for binding of large, hydrophobic ligands." ]

[ 2008 ]

1

[]

0

null

[ "Bacteria", "Halobacteria", "Reticulomyxa filosa", "ecological metagenomes" ]

[ 723, 7, 1, 9 ]

4

[]

0

true

Domain

Domain of unknown function DUF8410

DUF8410

2

IPR059455

59,455

Domain of unknown function DUF8411

DUF8411

Domain

66

false

This domain is found in uncharacterised fungal proteins. It is predicted to fold into a complex α/β structure.

[]

0

[ "PFAM" ]

[ "PF28471" ]

[ "DUF8411" ]

[ 66 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "leotiomyceta" ]

[ 66 ]

1

[]

0

true

Domain

Domain of unknown function DUF8411

DUF8411

5

IPR059456

59,456

Domain of unknown function DUF8412

DUF8412

Domain

6,836

false

This entry represents an uncharacterised domain that is found N-terminal to . The function of these proteins is unknown. These proteins contain a conserved motif ALCXGWID in the central part of the sequence. This domain is found in both bacterial and fungal proteins.

[]

0

[ "PFAM" ]

[ "PF28474" ]

[ "DUF8412" ]

[ 6836 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Archaea", "Bacteria", "Eukaryota", "metagenomes" ]

[ 51, 6188, 551, 46 ]

4

[]

0

true

Domain

Domain of unknown function DUF8412

DUF8412

3

IPR059457

59,457

Domain of unknown function DUF8413

DUF8413

Domain

6,928

false

This entry represents a small extracellular three helical bundle domain found at the N terminus of proteins that contain a C-terminal integral membrane domain. This suggests these proteins are involved in sporulation. This domain is found in Pseudomonadati and Bacillati.

[]

0

[ "PFAM" ]

[ "PF28475" ]

[ "DUF8413" ]

[ 6928 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Opisthokonta", "metagenomes" ]

[ 6895, 2, 31 ]

3

[]

0

true

Domain

Domain of unknown function DUF8413

DUF8413

1

IPR059458

59,458

Domain of unknown function DUF8414

DUF8414

Domain

73

false

This domain is found in uncharacterised fungal proteins. It contains several conserved cysteine residues that may be involved in metal coordination.

[]

0

[ "PFAM" ]

[ "PF28477" ]

[ "DUF8414" ]

[ 73 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "leotiomyceta" ]

[ 73 ]

1

[]

0

true

Domain

Domain of unknown function DUF8414

DUF8414

6

IPR059459

59,459

Domain of unknown function DUF8415

DUF8415

Domain

283

false

This domain is found in uncharacterised metazoan proteins. It is predicted to fold into an α/β structure with two pairs of conserved cysteine residues. These residues are predicted to form disulfide bonds.

[]

0

[ "PFAM" ]

[ "PF28478" ]

[ "DUF8415" ]

[ 283 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Eumetazoa" ]

[ 283 ]

1

[]

0

true

Domain

Domain of unknown function DUF8415

DUF8415

8

IPR059460

59,460

Protein of unknown function DUF8416

DUF8416

Family

3,205

false

This family represents an uncharacterised domain found in bacterial proteins from the Bacteroidota phylum, particularly in members of Flavobacteriaceae and Sphingobacteriaceae. The domain typically spans approximately 90-100 residues and is positioned between the TMEM260-like domain ( ) and the TMEM260_2 domain ( ) in ...

[]

0

[ "PFAM" ]

[ "PF28497" ]

[ "DUF8416" ]

[ 3205 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteroidota", "Protostomia", "metagenomes" ]

[ 3155, 2, 48 ]

3

[]

0

true

Family

Protein of unknown function DUF8416

DUF8416

3

IPR059461

59,461

Domain of unknown function DUF8417

DUF8417

Domain

36

false

This domain is found in uncharacterised proteins mainly from Chlamydomonadales lineage. It is predicted to fold into an α/β structure composed of a curved β-sheet and array of α-helices packed on the concave side.

[]

0

[ "PFAM" ]

[ "PF28506" ]

[ "DUF8417" ]

[ 36 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Chlamydomonadales" ]

[ 36 ]

1

[]

0

true

Domain

Domain of unknown function DUF8417

DUF8417

8

IPR059462

59,462

Domain of unknown function DUF8418

DUF8418

Domain

3,418

false

This helix-turn-helix (HTH) domain is found twice in a group of uncharacterised proteins from plants. It is often found associated with and has a highly conserved motif DYF.

[]

0

[ "PFAM" ]

[ "PF28509" ]

[ "DUF8418" ]

[ 3418 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Eukaryota" ]

[ 3418 ]

1

[ "Arabidopsis thaliana", "Oryza sativa subsp. japonica", "Zea mays" ]

[ 5, 47, 6 ]

3

true

Domain

Domain of unknown function DUF8418

DUF8418

2

IPR059463

59,463

Protein of unknown function DUF8419

DUF8419

Family

3,158

false

This entry represents a conserved region found in fungal proteins. It is predicted as a transmembrane and composed of α-helices.

[]

0

[ "PFAM" ]

[ "PF28510" ]

[ "DUF8419" ]

[ 3158 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Dikarya" ]

[ 3158 ]

1

[ "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)" ]

[ 3 ]

1

true

Family

Protein of unknown function DUF8419

DUF8419

7

IPR059464

59,464

Domain of unknown function DUF8420

DUF8420

Domain

251

false

This domain is found in uncharacterised fungal proteins. It is usually flanked by domains predicted as transmembrane. This domain is predicted to fold into a globular structure composed of a open barrel decorated with α-helices.

[]

0

[ "PFAM" ]

[ "PF28511" ]

[ "DUF8420" ]

[ 251 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "leotiomyceta" ]

[ 251 ]

1

[]

0

true

Domain

Domain of unknown function DUF8420

DUF8420

6

IPR059465

59,465

Domain of unknown function DUF8421

DUF8421

Domain

265

false

This domain is found in uncharacterised fungal proteins. It contains several highly conserved cysteine and histidine residues that may coordinate a metal ion. These residues come close in space and are predicted to form substructures each of which is reminiscent of treble-clef zinc fingers.

[]

0

[ "PFAM" ]

[ "PF28513" ]

[ "DUF8421" ]

[ 265 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "sordariomyceta" ]

[ 265 ]

1

[ "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)" ]

[ 1 ]

1

true

Domain

Domain of unknown function DUF8421

DUF8421

5

IPR059466

59,466

Domain of unknown function DUF8422

DUF8422

Domain

4,706

false

This domain is found in uncharacterised metazoan proteins. It is predicted to adopt a non-compact structure composed mainly of α-helices. This domain is sometimes found in combination with and .

[]

0

[ "PFAM" ]

[ "PF28514" ]

[ "DUF8422" ]

[ 4706 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Eukaryota", "invertebrate metagenome" ]

[ 4705, 1 ]

2

[ "Drosophila melanogaster" ]

[ 2 ]

1

true

Domain

Domain of unknown function DUF8422

DUF8422

5

IPR059467

59,467

Protein of unknown function DUF8423

DUF8423

Family

6

false

This entry represents uncharacterised proteins from Methanobacteriati lineage. They are predicted to adopt a non-compact α-helical structure which is likely to assemble in a higher order oligomer.

[]

0

[ "PFAM" ]

[ "PF28524" ]

[ "DUF8423" ]

[ 6 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Aerophobetes bacterium", "Methanomassiliicoccales" ]

[ 1, 5 ]

2

[]

0

true

Family

Protein of unknown function DUF8423

DUF8423

1

IPR059468

59,468

Domain of unknown function DUF8424

DUF8424

Domain

92

false

This domain is found in uncharacterised proteins from Thermoproteota lineage. It is predicted to fold into a complex structure composed of a flatten β-barrel in which a small β-sandwich is inserted.

[]

0

[ "PFAM" ]

[ "PF28525" ]

[ "DUF8424" ]

[ 92 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Sulfolobaceae" ]

[ 92 ]

1

[]

0

true

Domain

Domain of unknown function DUF8424

DUF8424

2

IPR059470

59,470

Domain of unknown function DUF8426

DUF8426

Domain

3,245

false

This domain is found in uncharacterised bacterial proteins. It shares significant similarity with the Thermococcus gammatolerans McrB N-terminal domain and related YTH domain-like domains. It adopts a typical PUA-like fold.

[]

0

[ "PFAM" ]

[ "PF28530" ]

[ "DUF8426" ]

[ 3245 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Archaea", "Bacteria", "Eukaryota", "Viruses", "metagenomes" ]

[ 131, 3058, 4, 9, 43 ]

5

[]

0

true

Domain

Domain of unknown function DUF8426

DUF8426

9

IPR059472

59,472

Domain of unknown function DUF8428

DUF8428

Domain

2,800

false

This domain is found in uncharacterised bacterial proteins. It shares significant similarity to Ig-like domains, in particular domains members of (DUF3859) and (DUF6941).

[]

0

[ "PFAM" ]

[ "PF28532" ]

[ "DUF8428" ]

[ 2800 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Eukaryota", "metagenomes" ]

[ 2751, 3, 46 ]

3

[]

0

true

Domain

Domain of unknown function DUF8428

DUF8428

6

IPR059473

59,473

Coiled-coil region of unknown function DUF8429

DUF8429

Domain

1,751

false

This coiled coil domain is found in uncharacterised proteins mainly from gram-negative bacteria. It is usually followed by and Ig-like domain.

[]

0

[ "PFAM" ]

[ "PF28533" ]

[ "DUF8429" ]

[ 1751 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Bilateria", "Haloarcula", "metagenomes" ]

[ 1704, 2, 5, 40 ]

4

[]

0

true

Domain

Coiled-coil region of unknown function DUF8429

DUF8429

9

IPR059474

59,474

Domain of unknown function DUF8430

DUF8430

Domain

2,610

false

This domain is found in uncharacterised proteins mainly from gram-negative bacteria. It shares significant similarity to domains members of the DNA primase C-terminal domain superfamily such as and .

[]

0

[ "PFAM" ]

[ "PF28534" ]

[ "DUF8430" ]

[ 2610 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Protostomia", "metagenomes" ]

[ 2562, 2, 46 ]

3

[]

0

true

Domain

Domain of unknown function DUF8430

DUF8430

1

IPR059475

59,475

Domain of unknown function DUF8431

DUF8431

Domain

2,841

false

This domain is found in uncharacterised bacterial proteins. It is frequently found N-terminal to domains members of the Endonuclease/Exonuclease/phosphatase family . It is predicted to fold into a three-helical bundle.

[]

0

[ "PFAM" ]

[ "PF28535" ]

[ "DUF8431" ]

[ 2841 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteroidota/Chlorobiota group", "Russula earlei", "candidate division MSBL1 archaeon SCGC-AAA382M17", "metagenomes" ]

[ 2797, 1, 1, 42 ]

4

[]

0

true

Domain

Domain of unknown function DUF8431

DUF8431

6

IPR059476

59,476

Domain of unknown function DUF8432

DUF8432

Domain

1,029

false

This domain is found in a group of uncharacterised proteins from fungi. It is predicted to adopt a UBA domain-like structure. UBA domains are often involved in ubiquitin binding. The specific function of this domain

[]

0

[ "PFAM" ]

[ "PF28536" ]

[ "DUF8432" ]

[ 1029 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Fungi" ]

[ 1029 ]

1

[ "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)" ]

[ 1 ]

1

true

Domain

Domain of unknown function DUF8432

DUF8432

4

IPR059477

59,477

Domain of unknown function DUF8433

DUF8433

Domain

2,498

false

This domain is found in uncharacterised bacterial proteins. It probably folds into a small β-sandwich. it is usually found associated with a transmembrane domain.

[]

0

[ "PFAM" ]

[ "PF28541" ]

[ "DUF8433" ]

[ 2498 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteroidota", "metagenomes" ]

[ 2463, 35 ]

2

[]

0

true

Domain

Domain of unknown function DUF8433

DUF8433

4

IPR059478

59,478

Domain of unknown function DUF8434

DUF8434

Domain

2,372

false

This domain is found in uncharacterised bacterial proteins mainly from gram-negative bacteria. It is predicted to form a single transmembrane helix which sometime is found in combination with MlaD-like domain ( ).

[]

0

[ "PFAM" ]

[ "PF28542" ]

[ "DUF8434" ]

[ 2372 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteroidota/Chlorobiota group", "metagenomes" ]

[ 2328, 44 ]

2

[]

0

true

Domain

Domain of unknown function DUF8434

DUF8434

8

IPR059479

59,479

Domain of unknown function DUF8435

DUF8435

Domain

321

false

This domain is found in a group of uncharacterised proteins from worms. This domain has highly conserved motifs YRF and HLRxRK and is predicted to show high structural similarity with UBA domains, which are often involved in ubiquitin binding. It is often found associated with .

[]

0

[ "PFAM" ]

[ "PF28543" ]

[ "DUF8435" ]

[ 321 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Nematoda" ]

[ 321 ]

1

[ "Caenorhabditis elegans" ]

[ 3 ]

1

true

Domain

Domain of unknown function DUF8435

DUF8435

1

IPR059480

59,480

Domain of unknown function DUF8436

DUF8436

Domain

7,472

false

This small domain is found at the N terminus of a set of likely FAD-binding proteins. It forms an α-β plait fold.

[]

0

[ "PFAM" ]

[ "PF28550" ]

[ "DUF8436" ]

[ 7472 ]

1

[]

0

[ "3nlc" ]

1

[]

0

[]

0

null

[ "Bacteria", "Eukaryota", "metagenomes" ]

[ 7391, 7, 74 ]

3

[]

0

true

Domain

Domain of unknown function DUF8436

DUF8436

1

IPR059481

59,481

Domain of unknown function DUF8437

DUF8437

Domain

5,044

false

This entry represents a domain found in uncharacterised bacterial proteins. It is predicted to fold into a small α/β structure composed of β-hairpin and array of helices packed on it. This domain is usually found associated with a pair of P-loop domains with the typical for helicases arrangement.

[]

0

[ "PFAM" ]

[ "PF28554" ]

[ "DUF8437" ]

[ 5044 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Caudoviricetes", "Eukaryota", "unclassified sequences" ]

[ 4936, 23, 7, 78 ]

4

[]

0

true

Domain

Domain of unknown function DUF8437

DUF8437

6

IPR059482

59,482

Domain of unknown function DUF8438

DUF8438

Domain

1,540

false

This domain is found in uncharacterised proteins mainly from gram-negative bacteria. It is predicted to fold into small α/β domain consisting of three-stranded β-sheet and two α-helices packed on it. It is frequently found in combination with helicase domains.

[]

0

[ "PFAM" ]

[ "PF28556" ]

[ "DUF8438" ]

[ 1540 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "metagenomes" ]

[ 1508, 32 ]

2

[]

0

true

Domain

Domain of unknown function DUF8438

DUF8438

6

IPR059483

59,483

Domain of unknown function DUF8439

DUF8439

Domain

2,391

false

This domain is found in uncharacterised proteins mainly from gram-negative bacteria. Ir shares a significant similarity to the N-terminal domain of DNAA and it is predicted to adopt similar structure.

[]

0

[ "PFAM" ]

[ "PF28557" ]

[ "DUF8439" ]

[ 2391 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteroidota", "metagenomes" ]

[ 2347, 44 ]

2

[]

0

true

Domain

Domain of unknown function DUF8439

DUF8439

5

IPR059484

59,484

Protein of unknown function DUF8440

DUF8440

Family

528

false

This family of proteins are found in Bacteroidales. It contains an N-terminal signal peptide suggesting it is a secreted protein. Overall they show relatively low levels of conservation except for a conserved C-terminal 11 residue motif that is likely important for function.

[]

0

[ "PFAM" ]

[ "PF28586" ]

[ "DUF8440" ]

[ 528 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "metagenomes" ]

[ 525, 3 ]

2

[]

0

true

Family

Protein of unknown function DUF8440

DUF8440

2

IPR059485

59,485

Domain of unknown function DUF8441

DUF8441

Domain

72

false

This domain is found in uncharacterised bacterial proteins. It is predicted to fold into a structure with a significant similarity to known galactose binding domains.

[]

0

[ "PFAM" ]

[ "PF28587" ]

[ "DUF8441" ]

[ 72 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteroidota", "bioreactor metagenome" ]

[ 71, 1 ]

2

[]

0

true

Domain

Domain of unknown function DUF8441

DUF8441

3

IPR059487

59,487

Keratinocyte differentiation-associated/Dermokin

KRTDAP/DMKN

Family

881

false

This family includes keratinocyte differentiation-associated protein and dermokin which may act as soluble regulators of keratinocyte differentiation [ , ]. The keratinocyte differentiation-associated protein may play an important role in embryonic skin morphogenesis.

[]

0

[ "PFAM" ]

[ "PF15200" ]

[ "KRTDAP" ]

[ 881 ]

1

[ "REACTOME" ]

[ "R-HSA-9725554" ]

[ "REACTOME:R-HSA-9725554" ]

1

[]

0

[ "PUB00067673", "PUB00079052" ]

[ "15140226", "16374476" ]

[ "Characterization of Kdap, a protein secreted by keratinocytes.", "The human dermokine gene: description of novel isoforms with different tissue-specific expression and subcellular location." ]

[ 2004, 2006 ]

2

[]

[ "IPR028196", "IPR033541" ]

0

2

0

[ "Theria" ]

[ 881 ]

1

[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]

[ 18, 8, 7 ]

3

true

Family

Keratinocyte differentiation-associated/Dermokin

KRTDAP/DMKN

9

IPR059488

59,488

Small membrane protein YldA

YldA

Family

70

false

This family of small membrane proteins is named for YldA of Escherichia coli K-12 but is found in multiple members of the Enterobacterales [ ].

[]

0

[ "NCBIFAM" ]

[ "NF041476" ]

[ "membrane_YldA" ]

[ 70 ]

1

[]

0

[]

0

[ "PUB00106067" ]

[ "29645342" ]

[ "Identifying New Small Proteins in Escherichia coli." ]

[ 2018 ]

1

[ "IPR048192" ]

[]

1

0

1

[ "Bacteria" ]

[ 70 ]

1

[ "Escherichia coli (strain K12)" ]

[ 1 ]

1

true

Family

Small membrane protein YldA

YldA

1

IPR059489

59,489

IsaA-like, N-terminal domain

IsaA-like_N

Domain

498

false

This entry represents the N-terminal domain of bacterial transglycosylase enzymes, including IsaA and SceD proteins found in Staphylococcus species. These enzymes are able to cleave peptidoglycan and affect clumping and separation of bacterial cells [ ]. The domain adopts a lysozyme-like fold structure. SceD proteins a...

[]

0

[ "PFAM" ]

[ "PF27330" ]

[ "IsaA-like_N" ]

[ 498 ]

1

[]

0

[]

0

[ "PUB00162107" ]

[ "17675373" ]

[ "Characterization of IsaA and SceD, two putative lytic transglycosylases of Staphylococcus aureus." ]

[ 2007 ]

1

[]

0

null

[ "Bacteria", "Viruses" ]

[ 394, 104 ]

2

[]

0

true

Domain

IsaA-like, N-terminal domain

IsaA-like_N

4

IPR059490

59,490

Required for respiratory growth protein 1, C-terminal domain

RRG1_C

Domain

834

false

This entry represents the C-terminal domain of the required for respiratory growth protein 1 (RRG1). RRG1 is essential for respiratory growth and required for mitochondrial protein synthesis and vacuolar acidification [ , ]. The protein is localised to the mitochondrion and belongs to the RRG1 family. RRG1 is found in ...

[]

0

[ "PFAM" ]

[ "PF28561" ]

[ "RRG1_C" ]

[ 834 ]

1

[]

0

[]

0

[ "PUB00071556", "PUB00162282" ]

[ "19751518", "16168084" ]

[ "Genome-wide deletion mutant analysis reveals genes required for respiratory growth, mitochondrial genome maintenance and mitochondrial protein synthesis in Saccharomyces cerevisiae.", "Characterization of the yeast ionome: a genome-wide analysis of nutrient mineral and trace element homeostasis in Saccharomyces ...

[ 2009, 2005 ]

2

[]

0

null

[ "Dikarya" ]

[ 834 ]

1

[ "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Saccharomyces cerevisiae (strain ATCC 204508 / S288c)" ]

[ 1, 1 ]

2

true

Domain

Required for respiratory growth protein 1, C-terminal domain

RRG1_C

7

IPR059491

59,491

Inner membrane assembly complex subunit 17, N-terminal domain

INA17_N

Domain

61

false

This entry represents the N-terminal domain of INA17 proteins. INA17 (Inner membrane assembly complex subunit 17) is a component of the inner membrane assembly complex that promotes the biogenesis of mitochondrial F1F0-ATP synthase [ ]. The protein facilitates assembly of the peripheral stalk and promotes assembly of t...

[]

0

[ "PFAM" ]

[ "PF28275" ]

[ "INA17_N" ]

[ 61 ]

1

[]

0

[]

0

[ "PUB00162101" ]

[ "24942160" ]

[ "The INA complex facilitates assembly of the peripheral stalk of the mitochondrial F1Fo-ATP synthase." ]

[ 2014 ]

1

[]

0

null

[ "Saccharomycetes" ]

[ 61 ]

1

[ "Saccharomyces cerevisiae (strain ATCC 204508 / S288c)" ]

[ 1 ]

1

true

Domain

Inner membrane assembly complex subunit 17, N-terminal domain

INA17_N

4

IPR059492

59,492

BfoA-like, C-terminal domain

BfoA-like_C

Domain

1,006

false

This entry represents the C-terminal domain of Bifonsecin B biosynthesis cluster protein A Aspergillus brasiliensis (BfoA) and similar sequences mainly found in filamentous fungi. Members of this group are components of gene clusters that mediate the biosynthesis of dimeric gamma-naphthopyrones such as bifonsecin B and...

[]

0

[ "PFAM" ]

[ "PF28386" ]

[ "BfoA_C" ]

[ 1006 ]

1

[]

0

[]

0

[ "PUB00161828" ]

[ "31067027" ]

[ "Biaryl-Forming Enzymes from Aspergilli Exhibit Substrate-Dependent Stereoselectivity." ]

[ 2019 ]

1

[]

0

null

[ "Bacteria", "Eukaryota", "Viruses", "viral metagenome" ]

[ 40, 904, 61, 1 ]

4

[]

0

true

Domain

BfoA-like, C-terminal domain

BfoA-like_C

5

IPR059493

59,493

PH domain, ascomycetes

PH_41

Domain

133

false

This entry represents a PH domain found at the C terminus of a small set of uncharacterised proteins from ascomycetes. This domain is often found in proteins that contain another PH domain .

[]

0

[ "PFAM" ]

[ "PF26660" ]

[ "PH_41" ]

[ 133 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Dikarya" ]

[ 133 ]

1

[ "Saccharomyces cerevisiae (strain ATCC 204508 / S288c)" ]

[ 2 ]

1

true

Domain

PH domain, ascomycetes

PH_41

4

IPR059494

59,494

EcpD, C-terminal domain

EcpD_C

Domain

506

false

This entry represents the C-terminal domain of EcpD proteins found in Enterobacteriaceae. EcpD is a fimbria adhesin that functions as a tip pilus adhesin in the E. coli common pilus (ECP) system [ ]. EcpD is required for assembly of EcpA into fibres and plays a role in early-stage biofilm development and host cell reco...

[]

0

[ "PFAM" ]

[ "PF27328" ]

[ "EcpD_C" ]

[ 506 ]

1

[]

0

[]

0

[ "PUB00097427" ]

[ "22355107" ]

[ "Structural insights into the biogenesis and biofilm formation by the Escherichia coli common pilus." ]

[ 2012 ]

1

[]

0

null

[ "Pseudomonadota", "Thelohanellus kitauei", "bioreactor metagenome" ]

[ 504, 1, 1 ]

3

[ "Escherichia coli (strain K12)" ]

[ 1 ]

1

true

Domain

EcpD, C-terminal domain

EcpD_C

8

IPR059495

59,495

CRLF3, C-terminal domain

CRLF3_C

Domain

1,165

false

This entry represents the C-terminal domain of cytokine receptor-like factor 3 (CRLF3) animal proteins. CRLF3 proteins may play a role in the negative regulation of cell cycle progression [ ]. The proteins are localised to the cytoplasm and contain an N-terminal coiled-coil domain and a central fibronectin type-III dom...

[]

0

[ "PFAM" ]

[ "PF27985" ]

[ "CRLF3_C" ]

[ 1165 ]

1

[]

0

[ "6rpx", "6rpy", "6rpz" ]

3

[ "PUB00161887", "PUB00161888", "PUB00161889" ]

[ "19427400", "40331935", "17640376" ]

[ "Cloning and characterization of a novel intracellular protein p48.2 that negatively regulates cell cycle progression.", "Cytokine Receptor-like Factor 3 (CRLF3) and Its Emerging Roles in Neurobiology, Hematopoiesis and Related Human Diseases.", "Evolution of Class I cytokine receptors." ]

[ 2009, 2025, 2007 ]

3

[]

0

null

[ "Eumetazoa" ]

[ 1165 ]

1

[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]

[ 3, 3, 1, 6 ]

4

true

Domain

CRLF3, C-terminal domain

CRLF3_C

8

IPR059496

59,496

YojO

Family

114

false

This entry represents the YojO family of small proteins from enterobacterales. Members of this family are approximately 54 amino acids in length. The YojO protein from CFT073 is encoded on the chromosome of this highly virulent uropathogenic E. coli strain that causes pyelonephritis and other urinary tract infections. ...

[]

0

[ "PFAM" ]

[ "PF28594" ]

[ "YojO" ]

[ 114 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Enterobacteriaceae" ]

[ 114 ]

1

[ "Escherichia coli (strain K12)" ]

[ 1 ]

1

true

Family

YojO

7

IPR059497

59,497

Anti-sigma-M factor RsmA, C-terminal extracellular domain

RsmA_C

Domain

2,400

false

This entry represents the C-terminal extracellular domain of RsmA (regulator of SigM) and similar sequences from actinobacteria. RsmA is an anti-sigma factor that regulates the extracytoplasmic function (ECF) sigma factor SigM. It functions to hold the ECF sigma factor SigM in an inactive form until it is released by r...

[]

0

[ "PFAM" ]

[ "PF27063" ]

[ "RsmA_C" ]

[ 2400 ]

1

[]

0

[]

0

[ "PUB00004280", "PUB00159431" ]

[ "9634230", "20545848" ]

[ "Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.", "M. tuberculosis intramembrane protease Rip1 controls transcription through three anti-sigma factor substrates." ]

[ 1998, 2010 ]

2

[]

0

null

[ "Actinomycetes", "freshwater metagenome" ]

[ 2384, 16 ]

2

[]

0

true

Domain

Anti-sigma-M factor RsmA, C-terminal extracellular domain

RsmA_C

6

IPR059498

59,498

Mb0984, helical domain

Mb0984_helical

Domain

2,060

false

This entry represents an uncharacterised domain in Mb0984, found in bacteria. This domain contains a helical fold.

[]

0

[ "PFAM" ]

[ "PF27532" ]

[ "Mb0984_helical" ]

[ 2060 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Geodia barretti", "unclassified sequences" ]

[ 1986, 2, 72 ]

3

[]

0

true

Domain

Mb0984, helical domain

Mb0984_helical

6

IPR059499

59,499

RNF216P1

Domain

661

false

This entry represents RNF216P1 putative proteins. These are very small proteins of 42 amino acids that are highly similar to the N-terminal region of RNF216. RNF216P1 may be the product of a pseudogene and could encode a non-functional truncated protein. The protein has been identified in humans but its existence and f...

[]

0

[ "PFAM" ]

[ "PF28565" ]

[ "RNF216P1" ]

[ 661 ]

1

[ "REACTOME" ]

[ "R-HSA-936440" ]

[ "REACTOME:R-HSA-936440" ]

1

[]

0

[]

0

[]

0

null

[ "Euteleostomi" ]

[ 661 ]

1

[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]

[ 1, 7, 3, 4 ]

4

true

Domain

RNF216P1

2

IPR059500

59,500

Detocs histidine-protein kinase DtcA-like domain

DtcA-like_dom

Domain

333

false

This entry represents a domain found in Detocs histidine-protein kinase DtcA from Enterobacter cloacae (DtcA) and similar bacterial sequences. DtcA is a sensor-kinase member of the two-component regulatory system Detocs that confers resistance to bacteriophage [ ]. The function of this domain is still unknown.

[]

0

[ "PFAM" ]

[ "PF27260" ]

[ "Y4jQ" ]

[ 333 ]

1

[]

0

[]

0

[ "PUB00156057" ]

[ "37595565" ]

[ "A conserved family of immune effectors cleaves cellular ATP upon viral infection." ]

[ 2023 ]

1

[]

0

null

[ "Bacteria", "Eukaryota", "metagenomes" ]

[ 328, 2, 3 ]

3

[]

0

true

Domain

Detocs histidine-protein kinase DtcA-like domain

DtcA-like_dom

5

IPR059501

59,501

Rv3785-like, N-terminal domain

Rv3785-like_N

Domain

298

false

This entry represents the N-terminal domain of Rv3785, an uncharacterised protein from the Mycobacterium tuberculosis complex. Members of this group also include Mycobacterium bovis (gene Mb3814), and related species. The protein is predicted to be localised to the cytosol and is conserved within the Mycobacterium tube...

[]

0

[ "PFAM" ]

[ "PF27209" ]

[ "Rv3785_N" ]

[ 298 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacillati" ]

[ 298 ]

1

[]

0

true

Domain

Rv3785-like, N-terminal domain

Rv3785-like_N

4

IPR059502

59,502

NAI2-like, C-terminal domain

NAI2-like_C

Domain

204

false

This entry represents the C-terminal in NAI2 proteins from plants. These proteins play roles in seedling development and ER body formation. TSK-associating protein 1 is implicated in organising spindle microtubules and forming structural links between the nuclear envelope and the cytoskeleton through interactions with ...

[]

0

[ "PFAM" ]

[ "PF27022" ]

[ "NAI2_C" ]

[ 204 ]

1

[]

0

[]

0

[ "PUB00077379", "PUB00162541" ]

[ "22133685", "19847124" ]

[ "TSA1 interacts with CSN1/CSN and may be functionally involved in Arabidopsis seedling development in darkness.", "The ER body, a new organelle in Arabidopsis thaliana, requires NAI2 for its formation and accumulates specific beta-glucosidases." ]

[ 2011, 2009 ]

2

[]

0

null

[ "Brassicaceae" ]

[ 204 ]

1

[ "Arabidopsis thaliana" ]

[ 14 ]

1

true

Domain

NAI2-like, C-terminal domain

NAI2-like_C

1

IPR059503

59,503

Rv1289-like domain

Rv1289-like_dom

Domain

146

false

This entry represents a domain found in the uncharacterised protein Rv1289 from Mycobacterium tuberculosis and similar sequences from bacteria. The domain is approximately 210 amino acids in length. Its function remains to be determined.

[]

0

[ "PFAM" ]

[ "PF27329" ]

[ "Rv1289" ]

[ 146 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "ecological metagenomes" ]

[ 143, 3 ]

2

[]

0

true

Domain

Rv1289-like domain

Rv1289-like_dom

8

IPR059504

59,504

Phage SPO1 gene 51 protein-like

Phage_SPO1_gp51-like

Family

34

false

This entry represents gene 51 protein from Bacillus phage SPO1 and similar sequences found in bacteriophages. This 131 amino acid protein has a molecular weight of 15.1 kDa. The protein is also known as SPO1_19 and remains uncharacterised. The function of this protein is unknown.

[]

0

[ "PFAM" ]

[ "PF26856" ]

[ "Phage_SPO1_gp51" ]

[ 34 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Spounavirinae" ]

[ 34 ]

1

[]

0

true

Family

Phage SPO1 gene 51 protein-like

Phage_SPO1_gp51-like

5

IPR059505

59,505

AF2028-like, C-terminal domain

AF2028-like_C

Domain

24

false

This entry represents the C-terminal domain of AF2028-like proteins found in methanogenic and hyperthermophilic archaea. The proteins are predicted to be membrane-associated, containing multiple transmembrane helices. The function of this domain remains to be determined.

[]

0

[ "PFAM" ]

[ "PF27408" ]

[ "AF2028_C" ]

[ 24 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Archaea" ]

[ 24 ]

1

[]

0

true

Domain

AF2028-like, C-terminal domain

AF2028-like_C

2

IPR059506

59,506

AF2028-like. third domain

AF2028-like_3rd

Domain

24

false

This entry represents the third domain of AF2028-like proteins found in methanogenic and hyperthermophilic archaea. The proteins are predicted to be membrane-associated, containing multiple transmembrane helices. Its function remains to be determined.

[]

0

[ "PFAM" ]

[ "PF27409" ]

[ "AF2028_3rd" ]

[ 24 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Archaea" ]

[ 24 ]

1

[]

0

true

Domain

AF2028-like. third domain

AF2028-like_3rd

9

IPR059507

59,507

Rv2240c-like, four-helix bundle domain

Rv2240c-like_bundle

Domain

809

false

This entry represents a four-helix bundle domain found in Rv2240c, an uncharacterised membrane protein from Mycobacterium tuberculosis. The domain contains a pair of invariant cysteine residues located in the first and fourth α helices that likely form a disulphide bond, which may be important for structural stability....

[]

0

[ "PFAM" ]

[ "PF27150" ]

[ "Rv2240c" ]

[ 809 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Actinomycetes" ]

[ 809 ]

1

[]

0

true

Domain

Rv2240c-like, four-helix bundle domain

Rv2240c-like_bundle

4

IPR059508

59,508

YfjT/YkfB

Family

684

false

This entry represents YfjT/B and similar uncharacterised proteins found in Escherichia coli. These proteins are 155 amino acid and contain an N-terminal signal peptide. YfjT and YkfB are predicted to be secreted based on their signal peptide sequences. The function of this proteins remains to be characterised.

[]

0

[ "PFAM" ]

[ "PF27224" ]

[ "YfjT" ]

[ 684 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Chimalliviridae", "metagenomes" ]

[ 677, 4, 3 ]

3

[ "Escherichia coli (strain K12)" ]

[ 2 ]

1

true

Family

YfjT/YkfB

2

IPR059510

59,510

DHX57, N-terminal UBA domain

UBA_DHX57_N

Domain

709

false

This presumed UBA domain is found at the N-terminal end of the human putative ATP-dependent RNA helicase DHX57 and related proteins mainly found in vertebrates.

[]

0

[ "PFAM" ]

[ "PF27513" ]

[ "UBA_DHX57_N" ]

[ 709 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bilateria" ]

[ 709 ]

1

[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]

[ 4, 2, 1, 2 ]

4

true

Domain

DHX57, N-terminal UBA domain

UBA_DHX57_N

1

IPR059511

59,511

Glycine zipper containing PH domain

PH_gly_zipper

Domain

552

false

This entry represents a PH-like domain that is found in phage and prophage proteins, including Immunity protein from Bacillus phage SPbeta. It is unusual because it contains an inserted transmembrane domain containing a glycine zipper motif. These motifs usually mediate dimerisation of membrane helices. This TM helix m...

[]

0

[ "PFAM" ]

[ "PF27000" ]

[ "PH_gly_zipper" ]

[ 552 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Caudoviricetes", "Methanolapillus millepedarum", "Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194)", "ecological metagenomes" ]

[ 521, 24, 1, 1, 5 ]

5

[]

0

true

Domain

Glycine zipper containing PH domain

PH_gly_zipper

3

IPR059512

59,512

Rv0313-like, N-terminal three-helix region

Rv0313-like_N

Domain

496

false

This entry represents the N-terminal three-helix region of Rv0313, an uncharacterised protein of 128 amino acids found in Mycobacterium tuberculosis. According to the AlphaFold structure prediction, this region consists of three helical elements. The function of this protein remains to be determined.

[]

0

[ "PFAM" ]

[ "PF27179" ]

[ "Rv0313_N" ]

[ 496 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Actinomycetes" ]

[ 496 ]

1

[]

0

true

Domain

Rv0313-like, N-terminal three-helix region

Rv0313-like_N

3

IPR059513

59,513

XisA/XisC, N-terminal domain

XisAC_N

Domain

423

false

This entry represents an N-terminal domain found in XisA/XisC excisase proteins from cyanobacteria, particularly within the order Nostocales. These site-specific recombinases are essential for DNA excision during heterocyst differentiation in nitrogen-fixing cyanobacteria [ ]. XisA is necessary for excision of the nifD...

[]

0

[ "PFAM" ]

[ "PF27551" ]

[ "XisAC_N" ]

[ 423 ]

1

[]

0

[]

0

[ "PUB00162401" ]

[ "3144039" ]

[ "Genome rearrangement and nitrogen fixation in Anabaena blocked by inactivation of xisA gene." ]

[ 1988 ]

1

[]

0

null

[ "Bacteriophage sp.", "Cyanobacteriota" ]

[ 1, 422 ]

2

[]

0

true

Domain

XisA/XisC, N-terminal domain

XisAC_N

2

IPR059514

59,514

Rv3395c/MT3502-like, C-terminal domain

Rv3395c/MT3502-like_C

Domain

374

false

This entry represents the C-terminal domain of the Rv3395c and MT3502 proteins found in Mycobacterium tuberculosis and similar proteins from actinomycetes. The specific function of this domain remains to be determined.

[]

0

[ "PFAM" ]

[ "PF27314" ]

[ "Rv3395c_C" ]

[ 374 ]

1

[]

0

[]

0

[ "PUB00162132" ]

[ "21969609" ]

[ "Proteogenomic analysis of Mycobacterium tuberculosis by high resolution mass spectrometry." ]

[ 2011 ]

1

[]

0

null

[ "Mycobacteriales", "freshwater metagenome" ]

[ 373, 1 ]

2

[]

0

true

Domain

Rv3395c/MT3502-like, C-terminal domain

Rv3395c/MT3502-like_C

3

IPR059515

59,515

Otoancorin, N-terminal domain

Otoancorin_N

Domain

623

false

This entry represents the N-terminal domain of otoancorin, a GPI-anchored protein found at the interface between the apical surface of inner ear sensory epithelia and their overlying acellular gels. Otoancorin may function as an adhesion molecule and is essential for normal hearing [ ]. The protein is localised to the ...

[]

0

[ "PFAM" ]

[ "PF28491" ]

[ "Otoancorin_N" ]

[ 623 ]

1

[ "REACTOME", "REACTOME" ]

[ "R-HSA-163125", "R-MMU-163125" ]

[ "REACTOME:R-HSA-163125", "REACTOME:R-MMU-163125" ]

2

[]

0

[ "PUB00061604" ]

[ "11972037" ]

[ "Otoancorin, an inner ear protein restricted to the interface between the apical surface of sensory epithelia and their overlying acellular gels, is defective in autosomal recessive deafness DFNB22." ]

[ 2002 ]

1

[]

0

null

[ "Gnathostomata" ]

[ 623 ]

1

[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]

[ 2, 3, 2 ]

3

true

Domain

Otoancorin, N-terminal domain

Otoancorin_N

1

IPR059516

59,516

KlcB, third domain

KlcB_3rd

Domain

325

false

This entry represents the third domain of the KlcB protein, a 461 amino acid DNA-binding protein found on IncP-alpha plasmids. KlcB is a four-domain protein involved in transcriptional regulation and contains a DNA-binding region and regions with similarity to KorA and TrbA proteins [ ]. The protein is part of the kilC...

[]

0

[ "PFAM" ]

[ "PF27190" ]

[ "KlcB_3rd" ]

[ 325 ]

1

[]

0

[]

0

[ "PUB00162117" ]

[ "7519596" ]

[ "Structure, expression, and regulation of the kilC operon of promiscuous IncP alpha plasmids." ]

[ 1994 ]

1

[]

0

null

[ "Bacteria", "hydrothermal vent metagenome", "plasmids" ]

[ 314, 1, 10 ]

3

[]

0

true

Domain

KlcB, third domain

KlcB_3rd

9

IPR059517

59,517

Cold shock protein YnaE

YnaE

Family

307

false

This entry represents cold shock proteins found in enterobacterles, including YnaE and YdfK from Escherichia coli. These proteins are induced by cold shock, with YdfK showing up to 70-fold induction at 10 degrees Celsius [ ]. The precise molecular function remains to be determined.

[]

0

[ "PFAM" ]

[ "PF27475" ]

[ "YnaE" ]

[ 307 ]

1

[]

0

[]

0

[ "PUB00162421" ]

[ "14527658" ]

[ "Changes in Escherichia coli transcriptome during acclimatization at low temperature." ]

[ 2003 ]

1

[]

0

null

[ "Escherichia phage 2H10", "Gammaproteobacteria" ]

[ 1, 306 ]

2

[ "Escherichia coli (strain K12)" ]

[ 2 ]

1

true

Family

Cold shock protein YnaE

YnaE

1

IPR059518

59,518

Probable thylakoid lumen protein sll0997, C-terminal domain

Sll0997_C

Domain

300

false

This entry represents the C-terminal domain of Probable thylakoid lumen protein from Synechocystis sp., which is also found in the uncharacterised protein y4bJ from Sinorhizobium fredii and similar bacterial proteins. Y4bJ is a multi-pass membrane protein that belongs to the peptidase S1C family. Peptidase S1C proteins...

[]

0

[ "PFAM" ]

[ "PF27178" ]

[ "sll0997_C" ]

[ 300 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria" ]

[ 300 ]

1

[]

0

true

Domain

Probable thylakoid lumen protein sll0997, C-terminal domain

Sll0997_C

5

IPR059521

59,521

TP_0008-like domain

TP_0008-like_dom

Domain

299

false

This entry represents a domain that covers the whole length of the protein in TP_0008 from Treponema pallidum, and is located at the C-terminal of TP_0014 associated with . Its function remains to be determined.

[]

0

[ "PFAM" ]

[ "PF27194" ]

[ "TP_0008" ]

[ 299 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "ecological metagenomes" ]

[ 292, 7 ]

2

[]

0

true

Domain

TP_0008-like domain

TP_0008-like_dom

5

IPR059522

59,522

Skunalikevirus head completion protein 2

HCP2_skunalikevirus

Family

184

false

This entry represents the Skunalikevirus head completion protein 2 family which is involved in the assembly and morphogenesis of viral capsids. It likely acts as a stopper within the head-tail connector, securing the viral DNA inside the capsid. Additionally, it serves as a docking platform for the attachment of the pr...

[]

0

[ "PFAM" ]

[ "PF26825" ]

[ "HCP2_Skunalikevirus" ]

[ 184 ]

1

[]

0

[]

0

[ "PUB00082566" ]

[ "24027307" ]

[ "Structure, adsorption to host, and infection mechanism of virulent lactococcal phage p2." ]

[ 2013 ]

1

[]

0

null

[ "Bacteria", "Caudoviricetes" ]

[ 10, 174 ]

2

[]

0

true

Family

Skunalikevirus head completion protein 2

HCP2_skunalikevirus

2

IPR059523

59,523

FimE, C-terminal domain

FimE_C

Domain

187

false

This entry represents the C-terminal domain of FimE proteins. The domain adopts an immunoglobulin-like fold structure. FimE proteins are components of the fimbrium tip and are required for incorporation of FimC and FimD into fimbriae [ , ]. The proteins contribute to bacterial adhesion and host cell interaction. The sp...

[]

0

[ "PFAM" ]

[ "PF27397" ]

[ "FimE_C" ]

[ 187 ]

1

[]

0

[]

0

[ "PUB00161686", "PUB00161687" ]

[ "17526848", "19506009" ]

[ "Involvement of minor components associated with the FimA fimbriae of Porphyromonas gingivalis in adhesive functions.", "Host adhesive activities and virulence of novel fimbrial proteins of Porphyromonas gingivalis." ]

[ 2007, 2009 ]

2

[]

0

null

[ "Bacteroidales", "Siphoviridae sp. ctBLh2", "metagenomes" ]

[ 184, 1, 2 ]

3

[]

0

true

Domain

FimE, C-terminal domain

FimE_C

6

IPR059524

59,524

NAI2, N-terminal domain

NAI2_N

Domain

167

false

This entry represents the N-terminal in NAI2 proteins from plants. These proteins play roles in seedling development and ER body formation. TSK-associating protein 1 is implicated in organising spindle microtubules and forming structural links between the nuclear envelope and the cytoskeleton through interactions with ...

[]

0

[ "PFAM" ]

[ "PF27018" ]

[ "NAI2_N" ]

[ 167 ]

1

[]

0

[]

0

[ "PUB00077379" ]

[ "22133685" ]

[ "TSA1 interacts with CSN1/CSN and may be functionally involved in Arabidopsis seedling development in darkness." ]

[ 2011 ]

1

[]

0

null

[ "Brassicaceae" ]

[ 167 ]

1

[ "Arabidopsis thaliana" ]

[ 13 ]

1

true

Domain

NAI2, N-terminal domain

NAI2_N

1

IPR059525

59,525

Uncharacterized membrane protein AF_1327-like

AF_1327-like

Family

114

false

This entry represents the archaeal uncharacterised membrane protein AF_1327 and similar bacterial sequences. Members of this family vary in size, including AF_1327 (56 amino acids, ~6.2 kDa) and AF_2236 (211 amino acids, ~24.1 kDa). The proteins contain multiple predicted transmembrane helices and are predicted to be m...

[]

0

[ "PFAM" ]

[ "PF27271" ]

[ "AF_1327" ]

[ 114 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Archaea", "Bacteria", "Metamonada", "ecological metagenomes" ]

[ 10, 82, 4, 18 ]

4

[]

0

true

Family

Uncharacterized membrane protein AF_1327-like

AF_1327-like

3

IPR059526

59,526

Haemophilus phage HP1 protein YO09

Phage_HP1_YO09

Family

90

false

This entry represents the YO09 protein family found in HP1-like bacteriophages. YO09 is an uncharacterised protein of 86 amino acids (9.7 kDa) found in the cox-rep intergenic region of Haemophilus phage HP1. Members are also found in bacterial prophages.

[]

0

[ "PFAM" ]

[ "PF26890" ]

[ "Phage_HP1_YO09" ]

[ 90 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Caudoviricetes" ]

[ 79, 11 ]

2

[]

0

true

Family

Haemophilus phage HP1 protein YO09

Phage_HP1_YO09

8

IPR059527

59,527

AF_2407-like

Family

79

false

This entry represents the AF_2407 family of small uncharacterised proteins found in bacteria and archaea. The proteins are approximately 64 amino acids in length and contain a conserved pattern of cysteine and histidine residues that suggests zinc-binding capability. The function of this protein family remains to be de...

[]

0

[ "PFAM" ]

[ "PF27302" ]

[ "AF_2407" ]

[ 79 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Actinomycetota", "Archaea" ]

[ 51, 28 ]

2

[]

0

true

Family

AF_2407-like

8

IPR059528

59,528

Phage gene 86 protein

Phage_gp86

Family

70

false

This entry represents gene 86 protein (Gp86) found in mycobacteriophages. Members of this family are mainly found in bacteriophages that infect Mycobacterium species and in actinobacterial prophages. The function of this protein remains unknown.

[]

0

[ "PFAM" ]

[ "PF26832" ]

[ "Phage_gp86" ]

[ 70 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Viruses" ]

[ 26, 44 ]

2

[]

0

true

Family

Phage gene 86 protein

Phage_gp86

7

IPR059529

59,529

Mycobacteriophage gene 51 protein

Phage_gp51

Family

70

false

This entry represents gene 51 protein (Gp51) found in mycobacteriophages. Members of this family are small proteins of 65-67 amino acids, including those from mycobacteriophages L5 and D29. The function of this protein remains unknown.

[]

0

[ "PFAM" ]

[ "PF26826" ]

[ "Phage_gp51" ]

[ 70 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Caudoviricetes" ]

[ 9, 61 ]

2

[]

0

true

Family

Mycobacteriophage gene 51 protein

Phage_gp51

6

IPR059530

59,530

Mycobacteriophage gene 41 protein

Mycophage_Gp41

Family

56

false

This entry represents mycobacteriophage gene 41 protein family found in various mycobacteriophages including D29 and L5.

[]

0

[ "PFAM" ]

[ "PF26817" ]

[ "Mycophage_Gp41" ]

[ 56 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Caudoviricetes" ]

[ 4, 52 ]

2

[]

0

true

Family

Mycobacteriophage gene 41 protein

Mycophage_Gp41

2

IPR059531

59,531

YopE-YndK, two-helix transmembrane domain

YopE-YndK_TM

Domain

52

false

This entry represents a small α-helical transmembrane domain found in uncharacterised membrane proteins from Bacillales and associated prophages. The domain consists of two predicted transmembrane helices. YopE from Bacillus subtilis is an 83 amino acid SPbeta prophage-derived protein, whilst YndK is a 121 amino acid c...

[]

0

[ "PFAM" ]

[ "PF27611" ]

[ "YopE-YndK" ]

[ 52 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacillales", "Caudoviricetes" ]

[ 49, 3 ]

2

[]

0

true

Domain

YopE-YndK, two-helix transmembrane domain

YopE-YndK_TM

5

IPR059532

59,532

YmgJ-like

Family

46

false

This entry represents the uncharacterised protein YmgJ and similar sequences from bacteria. It is approximately 61 amino acids in length and is found in Escherichia coli (gene ymgJ, locus b4594) and related bacterial proteins. The E. coli YmgJ protein is encoded by a gene located immediately downstream of ymgI (b4593).

[]

0

[ "PFAM" ]

[ "PF28592" ]

[ "YmgJ" ]

[ 46 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Enterobacteriaceae" ]

[ 46 ]

1

[ "Escherichia coli (strain K12)" ]

[ 1 ]

1

true

Family

YmgJ-like

5

IPR059533

59,533

MJ1278-like

Family

41

false

This entry represents the uncharacterised protein MJ1278 and similar sequences found in archaea and bacteria. Proteins in this family are approximately 179-185 amino acids in length and contain predicted coiled-coil regions. Members are encoded by genes that are often adjacent in the genome, suggesting they may functio...

[]

0

[ "PFAM" ]

[ "PF27355" ]

[ "MJ1278" ]

[ 41 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Methanocaldococcus" ]

[ 33, 8 ]

2

[]

0

true

Family

MJ1278-like

7

IPR059534

59,534

Mycobacteriophage gene 62 protein

Mycophage_gp62

Family

36

false

This entry represents a small protein of unknown function found in mycobacteriophages, including gene 62 protein (Gp62) from Mycobacterium phage L5, which consists of 51 amino acids. The function of this protein family remains to be determined.

[]

0

[ "PFAM" ]

[ "PF26824" ]

[ "Mycophage_gp62" ]

[ 36 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Caudoviricetes" ]

[ 3, 33 ]

2

[]

0

true

Family

Mycobacteriophage gene 62 protein

Mycophage_gp62

4

IPR059535

59,535

Methanothermobacter ORF3

MTF_ORF3

Family

23

false

This entry represents the ORF3 family of uncharacterised proteins found exclusively in methanogenic archaea. The prototype protein is encoded by plasmid pFV1 in Methanothermobacter thermautotrophicus, which is associated with restriction-modification systems [ ]. The proteins are approximately 197 amino acids in length...

[]

0

[ "PFAM" ]

[ "PF27377" ]

[ "MTF_ORF3" ]

[ 23 ]

1

[]

0

[]

0

[ "PUB00004413" ]

[ "1336177" ]

[ "Modular organization of related Archaeal plasmids encoding different restriction-modification systems in Methanobacterium thermoformicicum." ]

[ 1992 ]

1

[]

0

null

[ "Methanobacteriaceae" ]

[ 23 ]

1

[]

0

true

Family

Methanothermobacter ORF3

MTF_ORF3

4

IPR059536

59,536

SPbeta prophage protein YosX

SPbeta_YosX

Family

23

false

This entry represents the YosX protein family found in SPbeta prophages. YosX is an uncharacterised protein of 117 amino acids (14.0 kDa) found in the temperate bacteriophage SPbeta that infects Bacillus species. The protein contains a predicted coiled-coil region from residues 5-50.

[]

0

[ "PFAM" ]

[ "PF26892" ]

[ "Phage_SPbeta_YosX" ]

[ 23 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacillus", "Bacillus phage SPbeta" ]

[ 22, 1 ]

2

[]

0

true

Family

SPbeta prophage protein YosX

SPbeta_YosX

1

IPR059537

59,537

AF2210-like

Family

21

false

This entry represents small AF2210-like proteins found in Archaeoglobales. The function of this protein remains to be determined.

[]

0

[ "PFAM" ]

[ "PF27422" ]

[ "AF2210" ]

[ 21 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Archaeoglobaceae" ]

[ 21 ]

1

[]

0

true

Family

AF2210-like

3

IPR059539

59,539

SPbeta prophage protein YopN

SPbeta_YopN

Family

11

false

This entry represents the YopN protein family found in SPbeta prophages. YopN is an uncharacterised protein of 105 amino acids found in the temperate bacteriophage SPbeta that infects Bacillus subtilis. The protein is encoded within the prophage genome when SPbeta is integrated into the host chromosome. SPbeta is a wel...

[]

0

[ "PFAM" ]

[ "PF26877" ]

[ "Phage_SPbeta_YopN" ]

[ 11 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacillus", "Bacillus phage SPbeta" ]

[ 10, 1 ]

2

[]

0

true

Family

SPbeta prophage protein YopN

SPbeta_YopN

2

IPR059540

59,540

DSR anti-defense 1

DSR_AD1

Family

5

false

The DSR anti-defense 1 family functions to counteract the defense-associated sirtuin 2 (DSR2) defense system of the host. Members of this family inhibit the NADase activity of host DSR2 by competing with the tail tube protein that normally activates DSR2. This interaction occurs in a 2:4 ratio with Bacillus subtilis DS...

[]

0

[ "PFAM" ]

[ "PF26840" ]

[ "DSR_AD1" ]

[ 5 ]

1

[]

0

[ "8k9a", "8w56", "8wkn", "8wkt", "8wyd", "8wye", "8wyf", "8xfe", "8y3m", "8y3w", "8y3y", "8ykf", "8yl5" ]

13

[ "PUB00161911", "PUB00161912", "PUB00161913", "PUB00161914", "PUB00161915" ]

[ "36192536", "39039073", "38555355", "38729958", "38538592" ]

[ "Multiple phage resistance systems inhibit infection via SIR2-dependent NAD+ depletion.", "The structural basis of the activation and inhibition of DSR2 NADase by phage proteins.", "Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.", "Molecul...

[ 2022, 2024, 2024, 2024, 2024 ]

5

[]

0

null

[ "Bacillus phage SPbeta", "Bacillus subtilis group" ]

[ 1, 4 ]

2

[]

0

true

Family

DSR anti-defense 1

DSR_AD1

4

IPR059541

59,541

YHR052C-B

Family

2

false

This protein family includes the uncharacterised protein YHR052C-B from Saccharomyces cerevisiae, a 57-residues long peptide encoded by a small open reading frame (smORF) [ ].

[]

0

[ "PFAM" ]

[ "PF23530" ]

[ "YHR052C-B" ]

[ 2 ]

1

[]

0

[]

0

[ "PUB00155509" ]

[ "29897761" ]

[ "Enrichment-Based Proteogenomics Identifies Microproteins, Missing Proteins, and Novel smORFs in Saccharomyces cerevisiae." ]

[ 2018 ]

1

[]

0

null

[ "Saccharomyces cerevisiae (strain ATCC 204508 / S288c)" ]

[ 2 ]

1

[ "Saccharomyces cerevisiae (strain ATCC 204508 / S288c)" ]

[ 2 ]

1

true

Family

YHR052C-B

6

IPR059542

59,542

YTH3-like, third C-terminal helical domain

YTH3_C

Domain

2,405

false

This entry represents the third small helical C-terminal domain found in YTH3 and related proteins mainly found in actinomycetes. The domain is located at the C terminus of proteins that are approximately 437 amino acids in length. The YTH3 protein is encoded upstream of the thcA gene in Rhodococcus erythropolis, which...

[]

0

[ "PFAM" ]

[ "PF27103" ]

[ "YTH3_C" ]

[ 2405 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "metagenomes" ]

[ 2398, 7 ]

2

[]

0

true

Domain

YTH3-like, third C-terminal helical domain

YTH3_C

6

IPR059543

59,543

YphF, N-terminal domain

YphF_N

Domain

1,469

false

This entry represents the N-terminal domain of uncharacterised YphF family proteins found in Bacillales, particularly in Bacillus and Paenibacillus species. YphF from Bacillus subtilis strain 168 is a 244 amino acid protein containing this domain. The protein is predicted to contain a prokaryotic lipoprotein signal pep...

[]

0

[ "PFAM" ]

[ "PF27610" ]

[ "YphF_N" ]

[ 1469 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacilli" ]

[ 1469 ]

1

[]

0

true

Domain

YphF, N-terminal domain

YphF_N

5

IPR059544

59,544

Cyclic-di-GMP receptor FimW, C-terminal beta-barrel domain

FimW_C

Domain

1,400

false

This entry represents the C-terminal β-barrel domain of FimW, a cyclic-di-GMP receptor protein from Pseudomonas aeruginosa and related proteobacteria. FimW is approximately 600 amino acids and contains an N-terminal region ( ), a central PilZ-like domain that binds cyclic-di-GMP (c-di-GMP), and this C-terminal β-barrel...

[]

0

[ "PFAM" ]

[ "PF27125" ]

[ "FimW_C" ]

[ 1400 ]

1

[]

0

[]

0

[ "PUB00161961" ]

[ "30581112" ]

[ "A Surface-Induced Asymmetric Program Promotes Tissue Colonization by Pseudomonas aeruginosa." ]

[ 2019 ]

1

[]

0

null

[ "Pseudomonadota", "ecological metagenomes" ]

[ 1364, 36 ]

2

[]

0

true

Domain

Cyclic-di-GMP receptor FimW, C-terminal beta-barrel domain

FimW_C

4

IPR059545

59,545

YkzI

Family

1,373

false

This entry represents uncharacterised protein YkzI and related proteins from bacillales. This protein has a helical fold.

[]

0

[ "PFAM" ]

[ "PF27544" ]

[ "YkzI" ]

[ 1373 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Caudoviricetes", "Eukaryota" ]

[ 1366, 5, 2 ]

3

[]

0

true

Family

YkzI

8

IPR059546

59,546

YdaY

Family

1,135

false

This entry represents the YdaY protein family found in Escherichia coli and related bacteria. YdaY is a small protein of approximately 119 amino acids encoded within the Rac prophage. The protein has been shown to interact with MurE (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-2,6- diaminopimelate ligase), which is ...

[]

0

[ "PFAM" ]

[ "PF27119" ]

[ "Phage_YdaY" ]

[ 1135 ]

1

[]

0

[]

0

[ "PUB00162256" ]

[ "14592990" ]

[ "Sequences that direct significant levels of frameshifting are frequent in coding regions of Escherichia coli." ]

[ 2003 ]

1

[]

0

null

[ "Bacteria", "Viruses", "metagenomes" ]

[ 926, 193, 16 ]

3

[ "Escherichia coli (strain K12)" ]

[ 1 ]

1

true

Family

YdaY

7

IPR059548

59,548

C2H2-type transcription factor zfpA, C-terminal domain

ZfpA_C

Domain

1,076

false

This entry represents the C-terminal domain of C2H2-type transcription factor zfpA from Aspergillus fumigatus and similar sequences from actinomycetes. ZfpA is a transcription factor involved in fungal growth and virulence potential [ ]. The protein negatively regulates antifungal drug susceptibility via transcriptiona...

[]

0

[ "PFAM" ]

[ "PF28332" ]

[ "ZfpA_C" ]

[ 1076 ]

1

[]

0

[]

0

[ "PUB00162435" ]

[ "37318356" ]

[ "The C2H2-Type Transcription Factor ZfpA, Coordinately with CrzA, Affects Azole Susceptibility by Regulating the Multidrug Transporter Gene atrF in Aspergillus fumigatus." ]

[ 2023 ]

1

[]

0

null

[ "Eukaryota" ]

[ 1076 ]

1

[ "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)" ]

[ 1 ]

1

true

Domain

C2H2-type transcription factor zfpA, C-terminal domain

ZfpA_C

5

IPR059549

59,549

Mitochondrial ribosomal protein mS27

Mrp13

Family

1,007

false

This entry represents mitochondrial ribosomal protein mS27 (also known as Small ribosomal subunit protein mS27 or Mrp13), a component of the small ribosomal subunit (37S) of mitochondrial ribosomes (mitoribosomes) in filamentous fungi such as Neurospora crassa. The mitoribosome is a dedicated translation machinery resp...

[]

0

[ "PFAM" ]

[ "PF28374" ]

[ "Mrp13" ]

[ 1007 ]

1

[]

0

[ "6yw5", "6ywe", "6ywx", "6ywy" ]

4

[ "PUB00162166" ]

[ "33056988" ]

[ "Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi." ]

[ 2020 ]

1

[]

0

null

[ "saccharomyceta" ]

[ 1007 ]

1

[ "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)" ]

[ 1 ]

1

true

Family

Mitochondrial ribosomal protein mS27

Mrp13

7

IPR059550

59,550

NADH-ubiquinone oxidoreductase 21.3 kDa subunit, C-terminal domain

NUJM_C

Domain

974

false

This entry represents the C-terminal domain of the NADH-ubiquinone oxidoreductase 21.3 kDa subunit (NUJM), found in fungi. This domain follows three transmembrane regions in the protein sequence. NUJM is a subunit of mitochondrial respiratory complex I, which catalyses the transfer of electrons from NADH to ubiquinone ...

[]

0

[ "PFAM" ]

[ "PF28358" ]

[ "NUJM_C" ]

[ 974 ]

1

[]

0

[ "7zm7", "7zm8", "7zmb", "7zme", "7zmg", "7zmh" ]

6

[ "PUB00162203" ]

[ "1825789" ]

[ "cDNA and genomic DNA sequence of the 21.3 kDa subunit of NADH:ubiquinone reductase (complex I) from Neurospora crassa." ]

[ 1991 ]

1

[]

0

null

[ "Eukaryota" ]

[ 974 ]

1

[ "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)" ]

[ 1 ]

1

true

Domain

NADH-ubiquinone oxidoreductase 21.3 kDa subunit, C-terminal domain

NUJM_C

8

IPR059551

59,551

YqeJ, C-terminal domain

YqeJ_C

Domain

915

false

This entry represents the C-terminal helical domain of umcharactersed YqeJ proteins found in enterobacterales. YqeJ proteins are membrane-associated with a transmembrane helix. YqeJ is approximately 160 amino acids. The specific function of this domain remains to be determined.

[]

0

[ "PFAM" ]

[ "PF27292" ]

[ "YqeJ_C" ]

[ 915 ]

1

[]

0

[]

0

[]

0

[]

0

null

[ "Bacteria", "Thelohanellus kitauei", "human gut metagenome" ]

[ 913, 1, 1 ]

3

[ "Escherichia coli (strain K12)" ]

[ 1 ]

1

true

Domain

YqeJ, C-terminal domain

YqeJ_C

8