PMCID string | Sentences string | ner list |
|---|---|---|
PMC11206251 | Five duplicate wells were set for each concentration. | [
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PMC11770130 | The metabolism of ceramide is extremely complicated, as these lipids can be synthesized and degraded by a large collection of enzymes in various pathways. | [
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PMC11352311 | Specifically, the addition of 100 μM, 150 μM, and 200μM esculin reduced the closure rate of 786-O to 77.21 ± 1.52%, 61.89 ± 3.52%, and 23.08 ± 2.45%, respectively (Figure 4C). | [
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PMC11720808 | Quantification of OS cell proliferation shown in (C). ( | [
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PMC11335267 | No differences in food intake were observed during the first 30 min of food availability (Fig. 8B), but then Alx3-deficient mice ceased eating for approximately two hours, whereas wild type mice went on feeding so that cumulative food intake increased progressively during this period (Fig. 8B). | [
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PMC11683240 | For this, the server Mutabind2 was used following three different approaches (1), mutate all residues for alanine at the same time (2), separate the residues in three specific clusters and mutate all the residues from each cluster; cluster 1: E75, E78, T309, K310, and S313; cluster 2: K174, E175, L176, D177, R178, and D179; and, cluster 3: Q44, S45, S301, and Q305. | [
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PMC11476222 | These results are consistent with findings previously reported by Eggers et al., 2016, where the percent recovery for the Folch method was also above 90% . | [
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PMC11686380 | These abnormalities are likely to lead to a haploinsufficiency condition similar to our case. | [
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PMC10366908 | EMab-300 recognized CHO/mEGFR cells dose-dependently at 10, 1, 0.1, and 0.01 μg/mL (Figure 2A). | [
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PMC11680578 | Statistical analyses were conducted using GraphPad Prism version 7.0. | [
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PMC10165258 | non-significant; ∗: . | [
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PMC9545474 | These observations are consistent with the proposed MoA for these complexes, which is based on the disruption of the cellular redox balance. | [
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PMC11321678 | In addition, scATAC‐seq profiles show periodic fragment length distributions and enrichment of fragments around TSS (Figure S1A, Supporting Information). | [
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PMC9847912 | Approximately 18 hours after the addition of DNA, the supernatant in each well was removed and replaced with 2 ml of fresh, complete DMEM. | [
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PMC10578720 | Globally, an estimated 250 million individuals are chronically infected with HBV, and about 1 million individuals die each year from HBV-related liver disease. | [
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PMC11502066 | These findings are of great interest for further development of novel agents for colon cancer therapy. | [
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PMC7823217 | Fig. B is reproduced from Ref. | [
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PMC11764090 | Plants have evolved various strategies to cope with cold stress. | [
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PMC11377827 | Representative of three biological replicates. ( | [
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PMC11300639 | Ring finger protein 26 (RNF26) is an E3 ubiquitin ligase belonging to the RING finger domain protein family. | [
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PMC9429973 | Dose escalation continues as an MTD has not yet been reached in any dose-escalation cohort. | [
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PMC5941560 | The Jurkat cell line has an extensive history as a model of T cell signaling. | [
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PMC11799620 | Briefly, the cells (1×10 cells/ml) seeded in a flask of 75 cm. | [
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PMC11422497 | Schematic representation of potential binding sites between miR-494-3p and KIT. ( | [
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PMC11787355 | N(Tumor only)=4, N(Flu TCR-T cell)=8, and N(PTPRZ1 TCR-T cell)=7. | [
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PMC11670407 | Taken together, our results indicate that OTULIN knockdown facilitates mitochondrial pathway apoptosis, but not ferroptosis, in cisplatin-treated osteosarcoma cells. | [
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PMC11467964 | We further investigated the distribution of somatic mutations and found that TP53 and ATRX were the most mutated genes in the high‐risk group. | [
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PMC11723947 | i, j Percentage of CD73FR4 (i) or Foxp3 (j) cells among WT or HP1α KO TCR Vβ6CD4 T cells, as determined in the spleen 21 days after engraftment. | [
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PMC11684821 | The conservation of TRAJ42 use across all donors suggests that these T cells respond to the same or similar MR1-restricted ligand. | [
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PMC11474209 | This increased response of mtDNA to oxidative lesions could either be due to the vicinity of the mitochondrial membrane region where ROS are produced or because of the asymmetric replication process of mtDNA. | [
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PMC5874706 | This demonstrated that the MTT assay worked properly for the determination of cell viability of A427 cells. | [
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PMC6133382 | Catalog Number 12149). | [
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PMC8633974 | Macrophages are ubiquitous as they are found in all lymphoid and non-lymphoid tissues and contribute both to cell homeostasis while serving as reservoirs for replication competent HIV-1 . | [
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PMC11013014 | 4-(2-(2,3-dichloro-4-(2-methylenebutanoyl)phenoxy)acetyl)-N-(4-fluorophenyl)piperazine-1-carboxamide (18). | [
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PMC10297204 | Macroscopically, most mice had recurrence within four weeks after the operation, and only one mouse had recurrence after four weeks (Figure 5). | [
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PMC11748618 | While not statistically significant, rs7525622-G-A had the same direction of effect as GTEx tissues in the MESA (β = 0.056, FDR ≥ 0.19) and AFGR cohort (β = 0.19, p ≤ 0.0042); suggesting that larger sample sizes are necessary for concluding an effect in these cell types. | [
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PMC11770199 | The area outlined by the black dashed line indicated the unfolded syncytia, and those outlined by the red dashed line indicated the shape of shrunk syncytia. ( | [
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PMC10547921 | Agensys recently introduced the azide group to the P2 and P4 subunits, resulting in a compound 23 with an IC50 of 0.057 nmol/L in MOLM13 cells. | [
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PMC11055323 | To test this hypothesis, we analyzed several candidate biomacromolecular complexes like BRG1/BAF we previously reported . | [
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PMC11591038 | These transgenic mice overexpress the human 4R/2N tau isoform bearing the P301L mutation under the control of the neuron-specific murine Thy1 promoter with an accumulation of hyperphosphorylated tau, which serves as a transgenic model for AD and frontotemporal dementia (FTD). | [
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PMC9429973 | 28 person-hours of interview material was analysed using pre-established criteria. | [
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PMC9684669 | ABCB1 Western blot analysis in MDR cells treated with the indicated terfenadine (Ter) concentration. | [
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PMC11585994 | Peripheral blood (PB) samples from healthy individuals (HIs) and bone marrow (BM) samples from T-ALL patients were obtained from the First Affiliated Hospital of Jinan University. | [
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PMC11377827 | Volcano plots of differential mRNA expression in control 1 versus 21% oxygen (left), or HIF1β KO cells compared with control cells in 1% oxygen (right). | [
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PMC5839394 | Cells were seeded at a density of 200, 400 and 800 cells in 6-well plates. | [
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PMC10440586 | Gene set enrichment analysis (GSEA) was performed using the “clusterProfiler” R package . | [
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PMC11188874 | The HTS also detected known proteasome inhibitors, for example, bortezomib and carfilzomib, as well as agents that previously not been shown to inhibit proteasomes (Supplementary Table S2; Supplementary Fig. S4B). | [
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PMC10976516 | In a preclinical experiment using athymic mice implanted with lung cancer, Chai et al. showed that a reverse genetics system based on the oncolytic NDV D90 strain (rNDV-GFP, recombinant NDV carrying an enhanced green fluorescent protein gene), as well as the parental D90 virus, significantly suppressed body weight loss and tumor growth (Table 2). | [
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PMC11461874 | The cells were treated with MG132, and DBP proteins were immunoprecipitated and subjected to immunoblotting with an anti-HA antibody to detect ubiquitinated DBP. | [
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PMC9712534 | A small area of the nucleus (shown with a white arrow) was photobleached, and fluorescence images were captured at the indicated time points. ( | [
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PMC11247842 | Before meta-analysis, we performed the following quality control on summary statistics from each partner in order to check inconsistencies, for example, to identify problems with allele frequencies or strand, level of breed stratification (lambda values) etc. | [
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PMC11627398 | Cuproptosis is a new form of cell death that is triggered by copper overload. | [
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PMC10748106 | It is noteworthy that the most cytotoxic iridoids (Figure 3A,B) exhibit a higher electrostatic distribution in the aldehydic substituent at C4, which also features a hydroxyl at C8. | [
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PMC4270159 | Repeat independently two additional times. | [
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PMC9429973 | Patient characteristics were assessed at T0. | [
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PMC11533140 | Apoptosis was evaluated using the One-Step TUNEL Apoptosis Assay Kit (FITC) (cat. | [
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PMC11400680 | The first step, the prompt generator, aims to detect all possible locations of cells and nuclei and return the detected bounding boxes as prompts. | [
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PMC11429241 | This study aims to address the current knowledge gap in cell culture development by exploring cancer cell spheroid formation on 3D scaffolds printed via TPP. | [
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PMC9429973 | The median age at diagnosis was 53 years (range 23-79) and 54 (37%) were male. | [
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PMC10440586 | Each column represents a sample in the TCGA dataset. | [
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PMC11394730 | Key enzymes involved in glycolysis and glucose uptake are inhibited by QUE’s metabolic effect on cancer through disruption of the PI3K/Akt/mTOR pathways. | [
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PMC11185260 | N = 4–5/group. | [
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"tokens": [
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PMC6835428 | Thus, PCL is often combined with PEI and/or PEG. | [
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PMC9429973 | Aims: We evaluated the efficacy and safety/tolerability of gilteritinib vs SC in Asian pts with R/R FLT3 AML after first-line therapy. | [
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PMC10154881 | We observed that rMV‐SLAMblind cancer therapy elicited the activation of NK cells, CD4 T cells, and tumor antigen‐specific CD8 T cells. | [
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PMC7081114 | KIF21B plays an important role in HCC progression and may be a potential diagnostic and prognostic marker for HCC. | [
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PMC11224206 | Uniquely, in the preimplantation embryo, while the nuclear material is duplicated during the cleavages of the zygote, the cellular contents (including the mitochondria) are not. | [
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PMC11714165 | Additionally, the zeta potential and hydrodynamic size of the assembled nanoparticles were determined using a Zetasizer Nano ZS90 (Malvern, UK) For the preparation of co‐assembled bone‐targeted fluorous NBD (denoted as DN‐F), NBD‐F (5 mg) and D‐NBD‐F (2.33 mg) were dissolved in methanol (1.2 mL). | [
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PMC11269933 | The phosphorylation level at the CgERK1/2 T187 site increased in C. angulata and decreased in C. gigas. | [
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PMC9429973 | To correct for those differences between methods, we applied a correction factor to the DIHRMS data using the formula (1/Ht)*(1-Ht/1), correcting for the RBC volume (1/Ht) and the plasma volume (1-Ht/1). | [
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PMC11741906 | Whereas SK-OV-3 cell line was grown in McCoy's 5a containing 15 % FBS, 2 mM glutamine, and 0.1 mg/ml of penicillin/streptomycin. | [
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PMC11334037 | OE-IGF2 transfected-GIST-T1 cell lines were injected into the spleen. | [
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PMC3888431 | Two experimental setups of cultivation were done, where cells were exposed to either temperature stress or pH-shift to obtain a broad range of diverse transcripts. | [
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PMC9429973 | Cladribine based regimen in treatment of r/r AML proved to be effective,while the total rate of response is limited. | [
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PMC11754436 | Differential expression of DHRS4-AS1 in human osteoblast cell line and three OS cell lines, *Represent comparison with the hFOB1.19 group. ( | [
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PMC11243198 | In GLI-dependent cancer cell models, treatment with BAS 07019774 significantly reduced cell viability in both U87MG and T98G glioblastoma cell lines. | [
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"tags": [
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PMC9250505 | For in vitro assays, the statistical differences between the treatment groups were compared using a one-way ANOVA followed by a Tukey’s multiple comparison test. | [
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PMC11678841 | Each year, a significant number of newly discovered natural compounds necessitate systematic efforts to understand their effectiveness and roles as bioactive components or templates for drug development. | [
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"as",
"bioactive",
"components",
"or",
"templates",
"for",
"drug",
"development",
"."
]
}
] |
PMC9111184 | Cells were passed every 48–72 h before reaching confluence. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
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"Cells",
"were",
"passed",
"every",
"48–72",
"h",
"before",
"reaching",
"confluence",
"."
]
}
] |
PMC11694066 | For the analysis, initiation, termination, and cluster patterns of replicative forks were considered to measure fork velocity. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"initiation",
",",
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"and",
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"forks",
"were",
"considered",
"to",
"measure",
"fork",
"velocity",
"."
]
}
] |
PMC11711663 | A limitation of this study is the difference in clinical distributions between the training and independent set, such as the absence of AJCC stage IV patients in the independent cohort. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
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]
}
] |
PMC11519788 | As for the non-contact co-culture system, UBC cells and U937 cells (ratio 1:1) were cultured in the bottom and upper chamber of 6-well transwell plate (0.4 μm pore size, #3450; Corning, USA) for 96 h before seeding into 96-well plate. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
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]
}
] |
PMC9429973 | Cell viability was analyzed by Resazurin assay after 72 h of incubation. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
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"assay",
"after",
"72",
"h",
"of",
"incubation",
"."
]
}
] |
PMC11462673 | In comparison to the control group, mice subjected to MBZ treatment demonstrated significantly reduced infiltration in the liver, spleen, and bone marrow (Fig. 7D and Fig. S11D). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"(",
"Fig.",
"7D",
"and",
"Fig.",
"S11D",
")",
"."
]
}
] |
PMC9429973 | Grade 1-2 ICANS was observed in 3 patients. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Grade",
"1",
"-",
"2",
"ICANS",
"was",
"observed",
"in",
"3",
"patients",
"."
]
}
] |
PMC3164356 | The samples were treated with DNase in the presence of RNase inhibitor before cDNA synthesis. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
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"treated",
"with",
"DNase",
"in",
"the",
"presence",
"of",
"RNase",
"inhibitor",
"before",
"cDNA",
"synthesis",
"."
]
}
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PMC9919300 | The goal of the co-administration of the two phytochemicals is represented by the maintenance of the beneficial effects in terms of lipid and ROS reduction together with the cytoprotective effect andrographolide mediated. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
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"O",
"O",
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"O",
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"lipid",
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"ROS",
"reduction",
"together",
"with",
"the",
"cytoprotective",
"effect",
"andrographolide",
"mediated",
"."
]
}
] |
PMC9429973 | Here, we report outcomes of patients with HN presenting with COVID19 infection in the setting of high vaccination rates and effective COVID19 therapies, in a population that had low prior exposure to COVID19 due to national border controls and strict isolation measures. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"due",
"to",
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"strict",
"isolation",
"measures",
"."
]
}
] |
PMC11764090 | Phytohormone signaling mediates abiotic stress responses through multiple mechanisms, including abscisic acid (ABA), gibberellin (GA), jasmonic acid (JA), salicylic acid (SA), brassinosteroids (BR), ethylene (ET), and melatonin (MET). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"brassinosteroids",
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"BR",
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"ethylene",
"(",
"ET",
")",
",",
"and",
"melatonin",
"(",
"MET",
")",
"."
]
}
] |
PMC11204465 | They are highly toxic, mutagenic, carcinogenic, immunosuppressive compounds with severe detrimental effects on the human liver . | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"mutagenic",
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"immunosuppressive",
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"severe",
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"effects",
"on",
"the",
"human",
"liver",
"."
]
}
] |
PMC8956657 | Our structural data showed that the ORF4b NLS bound to IMPαs using a novel interaction geometry (Fig. 2). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"ORF4b",
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"using",
"a",
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"geometry",
"(",
"Fig.",
"2",
")",
"."
]
}
] |
PMC11657744 | Representative immunofluorescence images of cilia from Cep89 wild-type (Cep89) and mutant (Cep89) MEFs. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Representative",
"immunofluorescence",
"images",
"of",
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"from",
"Cep89",
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"(",
"Cep89",
")",
"and",
"mutant",
"(",
"Cep89",
")",
"MEFs",
"."
]
}
] |
PMC11699465 | For this purpose, we constructed TMEM199 overexpression and knockdown plasmids. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"For",
"this",
"purpose",
",",
"we",
"constructed",
"TMEM199",
"overexpression",
"and",
"knockdown",
"plasmids",
"."
]
}
] |
PMC11306019 | The treatment day was indicated by the black arrow. ( | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"treatment",
"day",
"was",
"indicated",
"by",
"the",
"black",
"arrow",
".",
"("
]
}
] |
PMC11612794 | 3xFLAG-CENP-T or 3xFLAG-CENP-T was expressed in AID-based CENP-T conditional knockdown CENP-C/Dsn1 cells or CENP-C/Dsn1 cells, treated with IAA for 12 h, and added nocodazole. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"3xFLAG-CENP-T",
"or",
"3xFLAG-CENP-T",
"was",
"expressed",
"in",
"AID-based",
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"knockdown",
"CENP-C/Dsn1",
"cells",
"or",
"CENP-C/Dsn1",
"cells",
",",
"treated",
"with",
"IAA",
"for",
"12",
"h",
",",
"and",
"added",
"nocodazole",
"."
]
}
] |
PMC8427838 | Total number of cases 530. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Total",
"number",
"of",
"cases",
"530",
"."
]
}
] |
PMC9429973 | Furthermore, we studied beta-defensin expression in two independent acute GVHD patient cohorts and in mice with acute GVHD. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Furthermore",
",",
"we",
"studied",
"beta-defensin",
"expression",
"in",
"two",
"independent",
"acute",
"GVHD",
"patient",
"cohorts",
"and",
"in",
"mice",
"with",
"acute",
"GVHD",
"."
]
}
] |
PMC5673060 | 6Comparative assessment of PazR and DasR cells. ( | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"6Comparative",
"assessment",
"of",
"PazR",
"and",
"DasR",
"cells",
".",
"("
]
}
] |
PMC8701144 | However, both AXIN1 and TNKS displayed increased fluorescent staining intensity following G007-LK treatment, thus indicating G007-LK mediated stabilization of AXIN1 and TNKS protein levels (Figure 1, row II, right column) as previously demonstrated upon TNKS inhibition in HEK293 cells . | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
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",",
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"as",
"previously",
"demonstrated",
"upon",
"TNKS",
"inhibition",
"in",
"HEK293",
"cells",
"."
]
}
] |
PMC11138140 | Therefore, we utilized the HOLOMONITOR App Suite software and its Single Cell Tracking module to quantify the three-dimensional optical volumes of individual cardiomyocytes and non-cardiomyocytes at the start (0 h) and finish (24 h) of our live imaging experiments (Figure 1D,E). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Therefore",
",",
"we",
"utilized",
"the",
"HOLOMONITOR",
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"the",
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"0",
"h",
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"and",
"finish",
"(",
"24",
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"of",
"our",
"live",
"imaging",
"experiments",
"(",
"Figure",
"1D",
",",
"E",
")",
"."
]
}
] |
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