PMCID string | Sentences string | ner list |
|---|---|---|
PMC11612626 | C, Patient multiple myeloma CD138 cells were treated with compound A followed by co-culturing with CD8 patient-derived autologous T cells (E:T = 2:1). | [
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PMC11247842 | Pleiotropic effects on mastitis and milk production have also been reported for the BTA6 QTL (GC CNV region) in several breeds . | [
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PMC11765243 | The following oligonucleotides were used: Cre 5′FW: GATGCAACGAGTGATGAGGT Cre 5′RV: GCATTGCTGTCACTTGGTCGT β-tubulin 5′-FW: GCCAGAGTGGTGCAGGAAATA β-tubulin 5′RV: TCACCACGTCCAGGACAGAGT Antibodies used in tissue culture, flow cytometry, Ig ELISA, and immunoblot are listed in Table S1. | [
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PMC11684269 | To thoroughly explore T cell heterogeneity between AKI and CKD, a study adopted 2 established murine models of kidney regeneration and fibrosis, founding that Tregs preferentially accumulate in fibrotic mouse kidneys to limit initial inflammation and cellular injury (137). | [
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PMC9918897 | Sample and study solution preparation and in vitro plasma antioxidant-capacity measurements were performed at the Laboratory of Food Chemistry, Faculty of Health Sciences, Semmelweis University, Hungary. | [
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PMC11437637 | Analysis revealed significant differences in the numbers of total lymphocytes, CD3+, CD4+T, CD8+T, and double-positive T cells, as well as in the ratios of Th1/CD4+T and Th1/Th2 between patients with EC and those with uterine fibroids (P < 0.05, Table 4). | [
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PMC10656496 | Our model is composed of cell lines with extensive RNAseq and copy number characterization which will be deposited in public databases to explore correlations between agents and molecular changes. | [
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PMC9429973 | Hematological and non-hematological adverse events were reported in 75.9% and 17.2% of patients, respectively. | [
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PMC11739696 | The tumor cells can avoid apoptosis through a loss of balance between anti- and pro-apoptotic proteins, reduced caspase function and impaired death receptor signaling. | [
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PMC10969097 | Each 15 g mushroom powder sample was extracted in 200 mL of solvent using ultrasound for 60 min. | [
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PMC9429973 | Biallelic inactivation of TP53, included in the definition of double-hit (DH) MM, entails an ominous prognosis, although is present in less than 5% of newly diagnosed MM (NDMM). | [
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PMC10218459 | Cells were first incubated for 24 h before being treated with various concentrations of the cytostatic drugs DMSO (control). | [
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PMC11401350 | To prevent CAR T cell fratricide, we used CD8-targeted LVs for CAR delivery. | [
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PMC6190245 | Gudarzi et al. also showed that ethanolic extract of F. gummosa seeds induce apoptosis in BHY (human oral squamous cell carcinoma) cell line (Gudarzi et al., 2015 ▶). | [
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PMC11119602 | TG2 is also involved in the homeostasis of the actin cytoskeleton, the regulation of which is essential for proper intracellular trafficking of autophagic vesicles and their fusion with lysosomes . | [
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PMC9429973 | Methods: Four patients with intestinal aGVHD and four healthy volunteers were invited to have peripheral blood drawn early in the morning on an empty stomach. | [
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PMC11699465 | Photos are taken by confocal microscopy.(C) 3D images of nuclear TMEM199, taken and reconstructed by Confocal Microscopy.(D) Immunofluorescence assay to show the flag signal location when cells exogenously expressed TMEM-Flag protein.(E) Live cell imaging to show the GFP signal in HEK293 cells with TMEM199-GFP plasmid transfection.(F) Western blotting assay shows the cellular fracture TMEM199 containing content. | [
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PMC9777812 | The full-length CDKN1A 3′UTR sequence was transfected into HEK293 cells (Procell, Hubei, China). | [
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PMC11711663 | Table 2 presents a detailed list of these 17 features grouped by their respective families. | [
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PMC6892818 | Others reported that in primary RCC cultures stimulation of CD40 by soluble agonists caused proliferation and enhanced cell motility. | [
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PMC10606998 | The irradiated Caco-2 cells incubated with citrate-coated SPIONs increased ROS concentration by 388% and, with malate-coated SPIONs, by 369% relative to the unirradiated cells. | [
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PMC9429973 | As far as histological features are concerned, follicular lymphoma was the most frequent one (35%). | [
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"O",
"O",
"O",
"O",
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}
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PMC10203589 | In exploring growth inhibitory factors in SS, ERK phosphorylation was completely inhibited after inhibition of FGFR autophosphorylation using SU5402 (157, 158), whereas p38 phosphorylation was not affected. | [
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PMC11653168 | Furthermore, Stattic treatment induced both apoptosis and autophagy in CCRF-CEM and Jurkat cells, as evidenced by the respective upregulation of cleaved caspase-3 and LC3B. | [
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PMC11791203 | Currently, cancer has emerged as a significant public health issue, with over 52,900 new diagnoses and more than 27,000 deaths occurring daily worldwide. | [
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PMC11786156 | Inside blood vessels, tumor cells adhere to each other less frequently via CD54 because of the sparse cell density. | [
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PMC10006224 | For all the libraries, 8–9 PCR cycles were used for amplification and they were then sequenced on an Illumina NextSeq550 (82 × 43 bp). | [
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"O",
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PMC10958426 | We identified copy number variations (CNVs) in each cancer cell and found correlation between gene copy number and expression level in cancer cells at single cell resolution. | [
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"O",
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"O",
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PMC11732628 | no. ABS132005; 1:500; Absin; Shanghai, China), cleaved caspase-9 (cat. | [
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PMC11552389 | After reaching 90–95% confluence in 6-well plates, wounds were created by scratching the surface of the plates with a 10 μL pipette tip. | [
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PMC11365427 | To investigate the impact of phenylalanine deprivation on MM in vitro, we designed a phenylalanine-free medium to create an external environment conducive to phenylalanine deprivation. | [
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"O",
"O",
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PMC9031474 | It is suggested that 8 is a prodrug of 7 and the in situ formation of 7 inside the cell increases its cytotoxic activity. | [
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PMC8010066 | In contrast to the SA-1/PA-4 combination, the co-culture of SA-1 with PA-2 and PA-3 led to a notable decline in resistance to carbapenems. | [
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"tags": [
"O",
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PMC9429973 | 90% of t-MDS pts had adverse CG (IPSS-R CG score 3-4) at MDS dx, compared to 46% in de novo MDS pts (p=0.004). | [
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"tags": [
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PMC10440586 | The color development was performed using diaminobenzidine (DAB) solution after thorough rinsing in PBS. | [
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"O",
"O",
"O",
"O",
"O",
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PMC9429973 | During pre-HSCT dental assessment a squamous cell carcinoma of the right tongue was noted and later confirmed on biopsy; he subsequently underwent hemi-glossectomy and right neck dissection with free flap reconstruction. | [
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"tags": [
"O",
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}
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PMC3995603 | The HPLC-PDA method was utilized for simultaneous determination of the chlorogenic acid, caffeic acid, hyperoside, isoquercitrin, isochlorogenic acid A and scoparone content of A. capillaris using mobile phases comprised of 1.0% (v/v) acetic acid in water (A) and 1.0% (v/v) acetic acid in acetonitrile (B). | [
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"tags": [
"O",
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"O",
"O",
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"O",
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PMC11734514 | p<0.05. | [
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"tags": [
"O",
"O"
],
"tokens": [
"p<0.05",
"."
]
}
] |
PMC7081114 | KIF21B expression levels were significantly higher in HCC tissues than in corresponding adjacent normal tissues. | [
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"tags": [
"O",
"O",
"O",
"O",
"O",
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"O",
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"adjacent",
"normal",
"tissues",
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]
}
] |
PMC11661040 | All cells were supplemented with 10% FBS (Servicebio Technology, Wuhan, China), penicillin (100 U/mL) and streptomycin (100 mg/mL). | [
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"tags": [
"O",
"O",
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] |
PMC9429973 | Median OS rate was NE for the TN and R/R cohorts; estimated 66-mo OS rate was 91% (TN; 51, 99) and 71% (R/R; 60, 80). | [
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"tags": [
"O",
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PMC11766350 | Samples were loaded onto a 96-well U-bottom plate and analyzed by FACS Accuri C6 (BD, Franklin Lakes, NJ, USA). | [
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"O",
"O",
"O",
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] |
PMC11730305 | In this method, metal nanoparticles are coated with non-toxic molecules to reduce their undesirable cytotoxic effects and improve their stability, and then, they are conjugated to therapeutic molecules. | [
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"tags": [
"O",
"O",
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}
] |
PMC11787381 | Further information on research design is available in the Nature Portfolio Reporting Summary linked to this article. | [
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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PMC8345486 | Before fixation, the number of cells was estimated by using a Thoma cell counting chamber (Marienfeld, Germany). | [
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"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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PMC11411004 | Finally, the complex was added to the 12-well plate after liquid exchange, waited for about 5 h, replaced with 1 mL of DMEM/F12 complete medium to continue the culture, cultured for 24–48 h, digested and then transferred to the 6-well plate for culture, and screened with 15 μg/mL of Blasticidin S (ST018, Beyotime) at progressively decreasing concentrations, successfully screening out the desired pooled polyclonal cells, named CHO-ADM. | [
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PMC11779993 | We examined whether SPEE affects the phosphorylation of FAK and Src, which play a crucial role in regulating keratinocyte migration and wound healing by western blotting. | [
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PMC10577955 | A549 cells were developed and attached to the well walls during night. | [
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PMC9635307 | Incorporation of [H] in the harvested cells were measured by a β-ray scintillation counter (MicroBeta, PerkinElmer). | [
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PMC9429973 | Patients with cMPN and those transplanted after to 2 years from diagnosis had a higher incidence (28.5% and 13%; p-value 0.03). | [
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PMC11442172 | Acidosis-induced metabolic rewiring of cancer cells results in novel metabolic vulnerabilities that could potentially be exploited. | [
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PMC11791478 | Clinical signs, body weights, food intake, ophthalmology, clinical pathology parameters (hematology, clinical chemistry, coagulation, and urinalysis), toxicokinetic (TK) parameters, gross necropsy, organ weights, and histopathology (lungs, gross lesions, and eyes for one animal dosed at 18 mg/kg XB002 with ocular symptoms) were evaluated. | [
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PMC11422497 | Our research findings indicate that circ_SMA4-induced silencing of miR-494-3p results in the activation of KIT. | [
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PMC11593713 | The accumulation of reactive oxygen species (ROS) affects the host’s defense mechanisms, which in turn enhances viral infections. | [
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PMC11506670 | Finally, the in silico analysis carried out predicted a deleterious or pathogenic consequence for each of the NRAS mutants. | [
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PMC9429973 | Overall, 24%, 33% and 11% of pts had 1 log, 2 logs or 3 BCR-ABL transcript logs reduction from baseline (68% of pts had a molecular improvement from baseline). | [
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PMC10530622 | The activation of TRPV1 was associated with an increase of arachidonate 12-lipoxygenase (ALOX-12) protein levels and, consequently, increased 12(S)-hydroxyeicosatetraenoic acid [12(S)-HETE], an endogenous TRPV1 ligand. | [
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PMC10968586 | In the large intestine, OLE is metabolized by gut microbiota, producing HT . | [
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PMC11285179 | The number of cells migrated to the lower chamber was calculated (Fig. 2D, right panel), and we found that the optimal concentration of CCL28 for enhancing the migration efficiency of pericytes is 250 ng/ml. | [
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PMC11711127 | Evidence for this as primary suppression mechanism of CD8+ Tregs is supported by reports that Prf1 negative mice are incapable of supressing TFH in Rag2 mice (160) and proliferation of Ag-activated CD4+ T cells in EAE model (161). | [
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PMC9927933 | As such, the mTORC signals (S6K1 and AKT) are activated to cooperate with Kras (MAPK) for lung tumorigenesis (Figure 7C). | [
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PMC11533140 | Thus, evaluating the selectivity of compounds toward normal cells might reduce the risk of clinical failure of new compounds. | [
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PMC11742290 | Anti-LGR5-ADC effectively inhibited tumor growth in MDA-MB231 and patient-derived xenografts with high-LGR5 in breast cancer . | [
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PMC11679326 | A characteristic feature of carcinoma tumor cell glycosylation is the expression of α2,3-, α2,6-, and α2,8-terminal sialic acid residues within the glycans. | [
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PMC9784246 | DMSO was used as a negative control, and etoposide as a positive control. | [
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"tags": [
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"O",
"O",
"O",
"O",
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PMC7553912 | The protein concentrations of the lysates were determined using the BCA Protein Assay kit (PIERCE, Rockford, IL). | [
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"O",
"O",
"O",
"O",
"O",
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PMC10033453 | Heterogeneity within cancer cell lines prior to infection may have affected susceptibility to infection or killing. | [
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"O",
"O",
"O",
"O",
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PMC11761919 | On day 12 after the third immunization, 49-day chickens in all groups except the negative control were inoculated with FAdV-4/GS01 with a dose of 10 ELD50 by intramuscular injection. | [
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"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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}
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PMC11794847 | Considering the nature of HVEM and its primary expression on T cells, we next planned to investigate the impact of T cells on the progression of NSCLC. | [
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PMC7724160 | The total peak area of all three species was set to 100% and the relative percentage of each species is calculated as a percentage of the total integrated peak area. | [
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PMC11703896 | Findings from a recent study by Wang et al. (Wang et al. 2021) aligns with these observations and thus supports the current data. | [
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PMC9429973 | Patients with PK deficiency also had more than twice as many outpatient visits than those in the non-PK deficiency cohort (mean [SD]: 35.2 [23.6] vs 14.1 [17.4] visits, respectively, p=0.0004). | [
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PMC9429973 | In the multivariate analysis, palliative status HR 4.8 (95% CI 1.07-22.18)p=0.040 and complete response HR 0.22 (95% CI 0.062-0.815)p=0.023 were risk and protective factors, respectively. | [
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PMC9250505 | Pharmacological inhibition of pBADS99 synergizes with PARPis to enhance PARPi IC50 and decreases survival, foci formation, and growth in ex vivo culture of EOC cells and patient-derived organoids (PDOs). | [
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"tags": [
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PMC10253553 | The induction of NDRG1 in response to hypoxia in cancer cells inhibits apoptosis and thus promotes cancer cell survival in tumors that have high levels of hypoxia . | [
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PMC11658074 | ADSCs were passaged every 3‒7 days, and passage 3 ADSCs were used to prepare ADSC-EVs. | [
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PMC11655536 | H Transmission electron microscope shows the lysosome when RPMI-8226 treated HA for 48 h, yellow arrow: lysosome. | [
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PMC9429973 | After determining the expansion dose, up to 8 cohorts in Phase 1b will be investigated in patients with subsets of advanced cancers including DLBCL-RT (n = 16). | [
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"tags": [
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PMC11218145 | Further research on the action of TB on the mevalonate pathways is fully justified. | [
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] |
PMC11786767 | ∗∗P < 0.01; two-tailed unpaired Student’s t-test. | [
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"O",
"O",
"O",
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] |
PMC6799808 | All data represent the mean ± SD (n = 3). | [
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"O",
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PMC10154097 | After incubation, the absorbance was assessed at 450 nm. | [
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"O",
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PMC11588008 | Both ends of the umbilical cord, measuring 0.5 cm in length, were removed. | [
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"O",
"O",
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] |
PMC11640419 | Cell cycle analysis was performed using the MAK344 cell cycle assay kit (Sigma-Aldrich, St. Louis, MO, USA). | [
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PMC11644761 | In differentiated cells, pterostilbene exhibited an inhibitory effect on cyclin CCND1 expression, observable even after just 4 h of treatment at the lowest concentration tested. | [
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"tags": [
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PMC10728535 | Sixteen expression profiles were excluded from this work due to being unclear. | [
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] |
PMC11525028 | To further validate the cytidine acetylation in ATF4 mRNA, we used the chemical reduction method using sodium cyanoborohydride (NaCNBH3), which causes the incorporation of non-cognate deoxynucleotide triphosphates in acetylated cytidine sites upon reverse transcription, and the ac4C site can be detected via Sanger sequencing at single-nucleotide resolution (Figure 3M).Figure 3ATF4 is regulated by NAT10 through ac4C modification(A) Volcano plot showing the mRNA expression of NAT10-KO compared to control cells. | [
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PMC6948907 | It causes hyperacetylation of the N- terminal tails of H3 and H4 in vivo and in vitro (Göttlicher et al., 2001). | [
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"O",
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PMC10969097 | Chemotherapy uses drugs that target dividing cells such as cancer cells. | [
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PMC9872547 | Our findings indicated that nano-curcumin could increase cellular apoptosis and reduce cell viability in human cervical cancer HeLa cells. | [
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"tags": [
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"O",
"O",
"O",
"O",
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PMC10158546 | Full-length hamster (29–231) PrP substrate was prepared in-house via recombinant expression in bacteria followed by purification with histidine affinity chromatography according to published methods . | [
{
"tags": [
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"O",
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PMC11240448 | External and internal cues processed by cell-surface receptors and downstream signaling pathways and resulting changes in posttranslational protein modifications, such as protein (de)phosphorylation, connect a cell’s biological responses and state transition dynamics with a cell’s omics profiles. | [
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PMC11224020 | For the FLIM experiments involving CK666, cells were plated in Fluorobright (Gibco) supplemented with 10% FBS, 1% penicillin–streptomycin, 1× GlutaMAX (Gibco) and 25 mM HEPES for 30 min and incubated with 30 µM CK666 and 1 µM ER Flipper-TR for 30 min. | [
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PMC11715644 | In comparison, 10A + ErbB2 cells had more homogeneous distribution of AR and SI, with very few cells showing large shape changes, indicating their less requirement for dramatic shape transitions to enter confinement. | [
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PMC11449273 | SKOV-3 cells were grown to confluency on glass coverslips and processed for staining as described previously . | [
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PMC11481779 | In our case, it guides diffusion to create a heat map that is as close as possible; however, it can be easily applied to classification problems as well (see Supplementary Materials). | [
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PMC11641532 | After quality control filtering, 96,175 cells were collected from 23 samples for downstream analyses. | [
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PMC11519583 | These results indicated that Wnt11-Ror2 signaling is required to regulate MP proliferation, adipogenic differentiation, and senescence. | [
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PMC9429973 | Comparable 5-year cumulative incidences in validation dataset were 86% (82, 90%), 69% (64, 74%) and 31% (22, 40%) (p for trend<0.001; Figure B). | [
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PMC11413393 | These results are consistent with the reduced transcript levels noted in Fig. 4e indicating a potential compromise in the integrity of these critical repair pathways. | [
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