PMCID string | Sentences string | ner list |
|---|---|---|
PMC11661024 | Signaling of these pathways actuates cysteine proteases and caspases to remove dead cells. | [
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PMC11394730 | Previous studies observed that ROS levels were decreased by combining therapy with ginseng and antioxidants. | [
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PMC11344246 | We also excluded cases that were of the sero-mucinous subtype (n = 10), as subsequent studies including the most recent WHO classification have shown that these tumours likely have a distinct origin in endometriosis and certainly have a distinct expression profile (28,29). | [
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PMC4816271 | An example of the expression of these CARs in the presence and absence of CID is shown in Fig 5A. | [
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PMC10588957 | Autophagy is an intracellular recycling process that maintains basal levels of metabolites and biosynthetic intermediates under starvation or other forms of stress; therefore, it is an important mechanism for metabolic adaptation in cancer cells (8). | [
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PMC6901583 | 5CCL2 is required for BRD4-induced tumor growth.a The indicated cytokines expression in GIST882 cells stably expressing shcon or shBRD4 were analyzed by RT-PCR. | [
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PMC10988555 | Additionally, a band in the visible region (465–467 nm) was also observed in the electronic spectra of all complexes except for 4, which was found blue-shifted, appearing at 339 nm with ε (molar extinction coefficient) of 3.15 × 10 M·cm, with the same order of magnitude as the ones placed in the visible area (464–467 nm). | [
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PMC11587606 | PKCζ phosphorylation (p-PKCζ) was also inhibited by similar treatment of the 3D cultures (Fig. 3A). | [
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PMC9822769 | So far, few structure-activity relationships on OCT substrates are available; these substrates generally contain a hydrophobic interaction domain in combination with an ionizable site . | [
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PMC7887261 | The DNA damage ratios by candidate protein overproduction were compared with GFP-Tubulin as previously described. | [
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PMC2944824 | Additionally, apoptosis was examined in brains of wild-type and Hr knockout mice. | [
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PMC11726183 | For the synthesis of isatin-based hydrazones, all the starting materials such as isatin were bought from Sigma Aldrich. | [
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PMC11787355 | tumor cells, MHC I, and transferred T cells, CD3 MHC I. k Transferred T cell numbers in tumoral and non-tumoral tissues in j upon ACT treatment. | [
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PMC9429973 | Further mechanistic exploration is warranted and ongoing. | [
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PMC9960565 | EA (%) calc.: | [
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PMC9429973 | A lot-specific E▫▫Ct and SF for the NPM1 Mutation Prototype Assay were generated and utilized to calculate the NPM1/ABL % value for a clinical sample. | [
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PMC10178190 | The cells were cultured in RPMI 1640 complete medium supplemented with 10% (w/v) fetal bovine serum (Biological Industries, Beit Haemek, Israel), 1% (w/v) L-glutamine, 100 units/mL penicillin, and 0.1 mg/mL streptomycin. | [
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PMC11612794 | Quantification data of GFP-Dsn1 signals at kinetochores in mitotic cells shown in (C). | [
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PMC10812665 | Nitrogen must thus be bound organically somewhere to prevent the release of ammonia (NH3). | [
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PMC10854447 | Found: C, 53.68; H, 3.29; N, 18.57. | [
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PMC11365983 | Quantification confirms the significant decrease in the mean signal intensity of the active phosphorylated form of Pdgfrα, and comparable reductions in the level of the tight junction protein Zo1, relative to wild-type embryos. ( | [
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PMC11676670 | Clinical tests have confirmed the presence of p53 protein in the tumor tissue. | [
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PMC11082662 | As shown in Figure 2B,2C the OS and PFS of ovarian cancer patients in the SMPDL3B high-expression group were significantly worse than those in the low-expression group, indicating that the prognosis of ovarian cancer was significantly negatively associated with SMPDL3B (P<0.05). | [
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PMC10523483 | Two putative NRF2-binding ARE sites in the promoter region of GCLC were identified via analyses of public Chromatin Immunoprecipitation-sequencing (ChIP-seq) data with GTRD tools (Fig. 5D) and were further verified by ChIP assay (Fig. 5E). | [
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PMC11637820 | Moreover, to assess the stability of the device, the pH and millivolts were measured in deionized water exposed to CAP for 0, 5, 10, 15 and 20 min. | [
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PMC9841531 | The MCT1-expressing lung and breast cancer cell lines A-549 and MCF-7, the MCT4-expressing cancer cell line MDA-MB-231, as well as the non-MCT1-expressing, noncancerous murine embryonic cell line NIH/3T3 were obtained from the National Centre for Cell Science (NCCS; Pune, India). | [
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PMC9352806 | FUDR (120 μM) was added to sterilize the worms during the treatment period. | [
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PMC11694346 | Moreover, the π-electrons of BT-NH are primarily distributed in both the HOMO and LUMO orbitals, whereas for BT-DNBS, the π-electrons in the HOMO are mainly localized on the dye moiety, and the π-electrons in the LUMO are predominantly distributed on the DNBS moiety. | [
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PMC11766309 | YKT6 expression in the tumor tissue compared with corresponding paratumor tissue among the 33 tumors; (B) Mean expression of YKT6 in the 33 different tumor types based on the TCGA database; (C) Mean expression levels of YKT6 in different organs based on the GTEx database; (D) Mean expression levels in the diverse cancer cell lines from the Cancer Cell Line Encyclopedia (CCLE) database. * | [
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PMC5833712 | The expression of the two ER subtypes, ERα and ERβ, was investigated in the human ovarian cancer cell lines SKOV3 and A2780cis, respectively. | [
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PMC10529414 | We used six samples obtained from nontumor lung tissue (NT) (Table 1). | [
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PMC11767725 | Ceramides, cholesterol, and free fatty acids are organized into lamellar structures that prevent TEWL and microbial penetration. | [
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PMC11394112 | We generated two Luciferase (Luc)-EGFP-expressing human DLBCL cell lines representing the different DLBCL cell-of-origin subtypes. | [
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PMC11596967 | Lipid peroxidation was assessed by quantifying MDA using a colorimetric MDA assay kit from Abcam (Waltham, MA, USA, Catalog #ab118970), following the instructions. | [
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PMC10919056 | The relevant experiments were conducted 48 hours post transfection. | [
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PMC10919056 | Workflow chart. | [
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PMC10165258 | Scale bars represent 400 μm.(D) Time lapse of a spheroid, showing its growth and cell death (stained with PI dye) over days. | [
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PMC8481254 | B, C Cell proliferation and colony-formation capacity were measured with CCK-8 cytotoxicity tests (B) and soft agar colony-formation assays (C), respectively, in Bel-7402 and Bel-7404 cells subjected to different treatments as indicated. | [
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PMC9111184 | Due to their presence in herbal infusion and to their known potential on hypercholesterolemia, the objective of the present work was to study the bioavailability of ezetimibe (EZ) and hydroxycinnamic acid derivatives (m-coumaric acid (m-CA), rosamrinic acid (RA) and chlorogenic acid (ChA)) and their potential on lowering the permeability of cholesterol through Caco-2 cell monolayers. | [
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PMC8633974 | Further characterization of the TatDE's mechanism of action needs be determined in regard to its ability to downregulate full-length viral transcripts due to tat, diminish rev-associated nuclear export, and impede gp41-mediated viral entry. | [
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PMC9583612 | See Figure S13 for an example of emission events on an enrolled asset that were captured by the CEMS. | [
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PMC9429973 | Analysis of the clinical data did not reveal a correlation with the patient’s mutational status. | [
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PMC5034105 | This finding helped to explain the unique ability of ZIKV to infect the fetus via the placenta and cause congenital anomalies, particularly when the infection occurred during the first trimester. | [
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PMC9268620 | The treatment with 1 μg/mL of nordamnacanthal showed an increase in the percentage of viable cells and, thus, gave the lowest proportions of apoptotic and necrotic cells throughout the experiment. | [
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PMC11095939 | Nedd4 has recently been identified as an essential regulator of liver regeneration through post-translational modification of growth factor signaling (Bachofner et al., 2017). | [
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PMC10502403 | Each circle indicates unstimulated NGMCs (blue), unstimulated NE1-GMCs (green), IMMU510-stimulated NGMCs (red), and NE1-pMHC-stimulated NE1-GMCs (orange). ( | [
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PMC10798140 | In addition, Toshiyuki Ishiwata's group found that lumican plays a vital function in the prevention of human embryonic kidney 293 cell attachment, as well as resulting in morphological changes to cell shape and appearance, and hence altering cell adhesion ability. | [
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PMC8414691 | Next, we examined the phenotypes of S2 cells after RNAi against DOM-A. The RNAi efficiency was tested by sqRT-PCR and immunofluorescent assays (Additional file 6: Fig. S5), since the DOM-A antibody did not work properly for Western blotting under our conditions. | [
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PMC10237474 | C-terminally His6-tagged protein 5 expressed from CHO-K1, HEK293, HEK293S GnTI and Expi293F GnTI was analyzed by SDS-PAGE under non-reducing and reducing conditions and stained by Coomassie blue. | [
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PMC6034753 | Briefly, Meq, apoptin and Meq-apoptin plasmids transfected DF-1 cells were seeded at 5000 cells per well in a 96 well plate (Corning). | [
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PMC9429973 | Summary/Conclusion: Our study presents the spectrum of clinical manifestations, management and outcomes of primary amyloidosis in Indian context. | [
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PMC11525028 | F–I) Proliferation (F), colony formation (G and H), and migration (I) of 143B (left) and HOS (right) cells treated with paliperidone or AG-401 at the indicated concentrations (n = 3). ( | [
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PMC11317131 | Helper, donor and epegRNA plasmids will be made available through Addgene. | [
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PMC10055960 | The in vitro study was performed on three ovarian cell lines: the A2780 platinum sensitive ovary carcinoma, the A2780cis cisplatin-resistant ovary carcinoma, and the OVCAR-3 adenocarcinoma cell lines. | [
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PMC11188874 | B3Z hybridoma T cells were engineered to express a T-cell receptor (TCR) specific for SIINFEKL that is presented by H-2K MHC-I alloantigen molecules on the surface of APCs and constitutes a unique T-cell hybridoma system to study tumor antigen-specific recognition. | [
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PMC11711663 | Pharyngeal cancers contribute 313,008 new cases, translating to 1.5% of all cancer incidences, with a mortality rate of 1.7%. | [
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PMC11098378 | In addition to identifying effector proteins with known host substrates, our unbiased screen uncovered novel effector proteins involved in breaking host immunity. | [
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PMC6379402 | Finally, the analysis of colorectal cancer is based on 275 cancer and 41 paired control tissue expression data from TCGA project COAD. | [
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PMC11488203 | Primary MSC from five different donors and passages (MSC241111 P4; MSC280416 P6; MSC180314 P2; MSC270815 P4 were used in the experiments and the human cell line MSC544 as described elsewhere . | [
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PMC9429973 | S. Fowler, L. McLaughlin, S. Bridges, M. Robichaud, B. Ridgway, D. Reece, K. Song, L. Dalrymple, R. Sully, S. Nason, S. Rowland, T. MacDonald, W. Paine, A. Reiman Maritime SPOR SUPPORT Unit, Horizon Health Network, Saint John; Maritime SPOR SUPPORT Unit, Université de Moncton, Moncton; Canadian Myeloma Priority Setting Partnership Steering Group, Montreal; Cancer Clinical Research Unit, Princess Margaret Cancer Centre, Toronto; Leukemia/Bone Marrow Transplant Program, Vancouver General Hospital, Vancouver; Oncology, Horizon Health Network; Biological Sciences, University of New Brunswick; Medicine, Dalhousie University, Saint John, Canada Background: Multiple myeloma, a hematological malignancy characterized by the abnormal accumulation of plasma cells in the bone marrow, is increasing in incidence worldwide. | [
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PMC7757104 | As a first approach to determine whether the three tested OPN-SIs differently modulated CDDP resistance in ovarian cancer cell lines, the transcriptional levels of each OPN-SI were analyzed in ACRP cells and compared with those in the corresponding parental cells. | [
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PMC11536589 | After being incubated in MRTX1133-free medium for almost 1 month, both the AsPC1-MR cells and KPC210-MR cells maintained their resistance to MRTX1133, indicating their stability. | [
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PMC7553912 | Effects of OSM on the expressions of crystal-binding molecules (OPN, ANXA1, and ANXA2), inflammation-related genes (TNF-α and MCP-1), and fibrosis-related genes (Col1a2 and αSMA) in renal fibroblasts. | [
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PMC8164677 | Data are expressed as means ± SEM (n = 7); and interactions examined by ANOVA (two-way) pursued by multiple comparison test (post hoc Bonferroni) using the software Graph Pad Prism-6. * | [
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PMC11531744 | The AUC obtained from the ROC curve for OS at 1, 2, and 3 years were 0.796, 0.743, and 0.716, respectively (Fig. 4B). | [
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PMC10747160 | In our hands, WT-Grft and Q-Grft showed a moderate ability to impede pseudoviral infection, with IC50 values of 2.16 μM and 4.26 μM, respectively (Figure 2C). | [
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PMC11756514 | Except in the SP-D aggregation assay, two-way ANOVA followed by Tukey’s multiple comparison test was used. | [
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PMC11792740 | As research progresses, these therapies may significantly improve survival rates and quality of life for patients with both solid and hematologic cancers. | [
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PMC7039683 | We found that a 467 bp core sequence from the zebrafish enhancer (plus-strand) is marginally more identical to a 400 bp core sequence from the human enhancer (plus-strand) relative to several control sequences including: the zebrafish minus-strand (reverse-complement), the non-biological reverse sequence, and non-biological sequences of similar lengths produced by Fisher-Yates shuffling of the plus-strand sequence (see Material and methods, Supplementary file 2a and Supplementary file 2b). | [
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PMC8068766 | PCST constructs optimum trees from the given DEGs (terminal nodes) by using human interactome data as a reference to find the shortest path between the nodes. | [
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PMC9429973 | All identified patients were retrospectively reviewed with a collection of clinical data, laboratory test results, and outcome. | [
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PMC9221284 | Moreover, other phosphorylation sites have been described in the C- terminal region of the c-Myc proteins . | [
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PMC11476837 | K67 inhibited NRF2 by disturbing the formation of the p-p62–KEAP1 complex. | [
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PMC11695546 | Each experiment has been run three times, and the outcomes are shown as the average ±SD. | [
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PMC11730000 | After 4 h, absorbance was measured at 450 nm using a microplate reader (Thermo Multiskan Ascent, USA) after 4 h. (a‑c) / (b‑c) x 100 was used to calculate the percentage of cytotoxicity, where a represents the absorbance of treated cells, b represents the absorbance of control cells, and c represents the absorbance of the blank. | [
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PMC11730000 | In several studies examining EGCG’s ability to prevent various cell lines from oxidative DNA damage, researchers found that at low concentrations, EGCG reduced DNA damage while acting as a pro-oxidant at higher concentrations. | [
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PMC10998613 | We found that while CXCR4 forms mostly homodimers in COS-7 and CHO cells, it self-associates into small multimers of three to four CXCR4 molecules in MDA-MB-231 and HCC4006 cells. | [
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PMC11756937 | Furthermore, the transition from integrating to non-integrating reprogramming methodologies has contributed to the increase in utilisation. | [
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PMC11527437 | It also is unknown whether vaccination of patients is a superior approach to obtain potent antitumor mKRAS-reactive TCRs compared with current in vitro or preclinical in vivo methods. | [
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PMC11742670 | The fundamental architecture of CNN. | [
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PMC6643347 | The main reason for the limited use of PBMC in experimental studies of the HIV infection is the lack of standardization and, as a consequence, the chance to encounter a donor with individual resistance to the HIV infection. | [
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PMC8633974 | Seventy-two hours post-treatment, cells were tested for rLNP mediated toxicity using MTT vitality assay. | [
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PMC11348300 | The compelling aspects of PRESTO as a tissue assessment guide have multiple features: 1) the safety of using a widely used metabolic molecule to induce contrast, 2) the largely underutilized potential of exploiting tissue hypoxia as a biomarker, 3) the recognition that imaging hypoxia and the chaotic capillary perfusion are ubiquitous indicators of cancer, and 4) the adaptability of PRESTO for dynamic imaging, aligning seamlessly with palpation. | [
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PMC9592219 | TOP2A expression was correlated with clinical stage, histological grade, and AFP level (Figure S2E–H). | [
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PMC10165258 | In parallel, droplet drug libraries were created in a different microfluidic chip. | [
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PMC11457557 | Emerging evidence suggests MicroRNAs (miRNAs) may play a role in the vasculopathy of DM .Fig. | [
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Emerging",
"evidence",
"suggests",
"MicroRNAs",
"... |
PMC11228511 | Representative microscopy images (Left) and line drawings (Right) of 4 × 4-µm regions in the lamin A (Upper) and progerin (Lower) meshworks in SMCs. ( | [
{
"tags": [
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
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"O",
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"O",
"O",
"O",
"O",
... |
PMC11658074 | Scale bars = 50 μm. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Scale",
"bars",
"=",
"50",
"μm",
"."
]
}
] |
PMC7723249 | CCHFV Ibar10200 strain (produced on SW13 cells, GenBank accession number NC005302) and HAZV strain JC280 (produced on Caco-2 cells, GenBank accession number M86624.1) were used for all experiments. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"... |
PMC9429973 | Key eligibility criteria include patients intolerant, refractory, resistant, or inadequately controlled by approved therapy, and platelet count ≥100 x 109/L. Key objectives are safety and reduction of spleen volume (SVR) by MRI/CT and total symptoms scores (TSS) using the MPN-SAF instrument. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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"O",
"O",
"O",
"O",
"O",
... |
PMC11367146 | The simulation system was equilibrated using the constant volume/constant pressure method with an equilibration time of 100 ps. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"simulation",
"system",
"was",
"... |
PMC11806106 | C Calculated EC50 values for DAMGO (B) were comparable between BRET (445 nM) and FRET-based sensor (430 nM) (P = 0.348, unpaired t test with Welch’s correction). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11461874 | HEK293T cells were transfected with DBP, 6xMyc-TRAF7 and GFP expression vectors and cultured for 48 h. The transfected cells were then treated with 100 μg/mL cycloheximide (Nakalai tesque, 06741-04) and 25 μM MG132 (CalBioChem, 474790) for time periods specified in the figures and harvested, followed by immunoblotting. | [
{
"tags": [
"B-CellLine",
"I-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"... |
PMC11411131 | For instance, in the case of GPx1, the gpx1 gene comprises two exons, with the TGA codon for Sec located 105 bp upstream of the splicing sites. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11519077 | It has been reported that T-cell priming is enhanced by IL-17, which stimulates the expression of proinflammatory cytokines (such as IL-1, IL-6, and TNF-α) and chemokines (such as chemokine ligand 1, MCP-1, and macrophage inflammatory protein-2) (23,44), and human UCMSC, in turn, causes downregulation of IL-23 and IL-17 in vivo and in vitro . | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11578343 | Future studies can further explore how viscoelastic differences manifest in high‐risk cells that possess other risk factors, such as family history and age. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
... |
PMC5833712 | Moreover, ERβ expression resulted in downregulation and inhibition of ERα activity, arrested the cells in the G2/M phase, and decreased the pAKT levels. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
... |
PMC6468656 | Differential gene expression signatures of ccRCC cohort divided into high ghrelin and low ghrelin groups were analyzed by Ingenuity Pathway Analysis (QIAGEN, Hilden, Germany; www.qiagen.com/ingenuity), according to the instructions provided. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11678368 | Each experiment included three technical replicates per concentration, with the tests repeated three to four times. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Each",
"experiment",
"included",
"three",
"techni... |
PMC11585587 | With GO enrichment analysis, we screened the top 10 biological processes (GO: BP), cellular components (GO: CC), and molecular functions (GO: MF) (Fig. 6A). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
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