PMCID string | Sentences string | ner list |
|---|---|---|
PMC9512971 | The events and reasons for censoring patients in this analysis are defined in Additional file 2: Table S4. | [
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PMC9429973 | Differential expression gene (DEG) analysis identified five tumor-specific gene candidates and the cell surface protein PLS3 was validated by flow cytometry (Figure 3). ( | [
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PMC9684669 | The relative chemiluminescence intensity of each sample at different temperatures was used to plot the temperature dependent melting curve. | [
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PMC8956657 | Antibodies, rabbit anti-Flag (cat# F7425), and mouse anti-β-tubulin (cat# T8328) were purchased from Sigma-Aldrich. | [
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PMC11286266 | Successfully rescued single clones by CRISPR/Cas9-mediated homology-directed repair (HDR) were evaluated in the absence (pale colour) and presence of ER stress (0.5 µM Tg, 5 hr, dark colour). | [
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PMC11541241 | When they inoculated these transgenic potato lines with P. infestans, the transgenic lines showed increased resistance to late blight, indicating that the sRNA generated by the transgenic plants could be absorbed by P. infestans and induce the RNAi effect. | [
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PMC9429973 | A dose escalation stage assessed single-agent zandelisib daily continuously and is not reported here (Soumerai et al, J Clin Oncol 2018;36:#7519). | [
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PMC11483468 | For the immunofluorescence assay, all treated cells were extensively washed with PBS, immobilized in cold methanol for 3 min, permeated with PBS for 10 min, and then sealed with new goat serum in PBS for 10 min. | [
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PMC11609529 | Statistical analyses were conducted using GraphPad Prism 10. | [
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PMC6181431 | To our knowledge no previous study has examined molecular mechanisms of acquired or secondary resistance of rapalog therapy in responding patients with RCC. | [
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PMC11126803 | ERβ, estrogen receptor β; LncRNA, long noncoding RNA; RCC, renal cell carcinoma; TCGA, The Cancer Genome Atlas. | [
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PMC7090062 | The 3’-untranslated region (UTR) and mutated 3’-UTR of the amplified BECN1 fragment was cloned into the pGL3 vector containing the firefly luciferase reporter gene (Promega, Madison, WI, USA). | [
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PMC5673955 | These cells remained alive, but they lost their ability to divide, which was confirmed by G0/G1 cell cycle arrest and reduction in a number of cells in S and G2/M phases (Fig. 5). | [
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PMC10587429 | These models fail to reflect the highly metastatic nature of this bone and soft tissue tumor, because ES cells injected subcutaneously do not metastasize. | [
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PMC11754436 | cck8 assay was performed to detect the proliferation and apoptosis levels of MG63 cells after co-transfection with DHRS4-AS1 and miR-362-5p mimic, *Represent comparison with the mNC group, # represents comparison with the mm group. ( | [
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PMC5535901 | Total RNA was isolated using TRIzol reagent (ThermoFisher Scientific, Grand Island, NY, USA) and cDNA was synthesized using AffinityScript Multiple Temperature cDNA Synthesis kit (AgilentTechnologies, Santa Clara, CA, USA). | [
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PMC11507371 | The protocol for the subsequent quantitative PCR (qPCR) was optimised for a 12 μL reaction volume using 6 μL SensiFAST SYBR No-ROX Mix (Bioline/Meridian Bioscience Inc., Cincinnati, OH, USA), 5 μL cDNA, and 1 μL primers (sense and antisense). | [
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PMC11786600 | Examination of the length of diabetic wounds stained with H&E (n = 3). ( | [
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PMC9096373 | Survival times, which started from the first day post-administration, were observed until death. | [
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PMC11092382 | A clinically feasible agent must have been tested in both clinical and toxicological studies. | [
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PMC11763111 | p < 0.05, **p < 0.01, ***p < 0.001, and ****p < 0.0001; ns, not significant LLT1 overexpression renders resistance to allogenic NK cell-mediated lysis. | [
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PMC10218459 | For each cell line, 2 × 10 cells per 200 µL of full medium were transferred to 6 wells of a 24-well plate. | [
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PMC11740399 | Quantitative analysis of the PKM2, FASN, p-AKT, and p-mTOR proteins. * | [
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PMC11643491 | We chose to employ the film-stretching approach as we found it had the best capability to optimize the production of anisotropic particles across different sizes and stretch levels using a variety of polymers. | [
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PMC8526701 | Prism VI software was used for statistical analyses. | [
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PMC11544122 | Receptor endocytosis was measured as described above. | [
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PMC11670407 | The Matrigel was thawed, diluted, and added to the growth surface of the transwell chamber (Labselect, Hangzhou, China) followed by resting at 37˚C for 1 h. The 143B cells and U2OS cells in the logarithmic growth phase were collected to perform trypsin digestion and serum-free medium resuspension. | [
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PMC11365427 | In RPMI-8226 cells, we identified 114 differential genes, with 80 upregulated and 34 downregulated genes. | [
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PMC9429973 | Results: Median age at time of ibrutinib treatment initiation was 74.0 years for the 1L pts in C1, and 72.5 and 73.0 years in the R/R cohorts of C2 and C3, respectively. | [
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PMC11564322 | In neutrophils isolated from the blood of healthy subjects, the 1 µg/mL concentration of the VGVAPG peptide increased cell migration, while no significant changes in cell migration were observed in neutrophils obtained from patients with chronic obstructive pulmonary disease (COPD) (characterized by persistent inflammation) . | [
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PMC11392912 | For quantification, cDNA of commercially available Clo-miR-14 was synthesized and amplified by PCR using different concentration in order to generate a standard curve (Figure 3A). | [
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PMC9739791 | Measurement of riboflavin excited state lifetime using time-correlated single photon counting (TCSPC) ruled out riboflavin excited state as an active catalyst. | [
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PMC11787355 | f Overall survival of i.c. | [
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PMC11129910 | Claudin1 was lowered very significantly in both transformed cell lines, RAO-4 and HMEC 5.6 Clone#5, suggesting that the combination of the loss of RAB25 and overexpression of H-RAS61L leads to the development of a mesenchymal, claudin-low tumor phenotype. | [
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PMC11367146 | For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.) | [
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PMC11772585 | Recent evidence suggests that this modification is linked to the development of several cancers, making it a promising target for cancer therapy. | [
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PMC11622247 | Increasing amounts of target RNA were added to probes C7-2AF568-QB-OMe and C7-QB-OMe in PBS and the fluorescence intensity at 600 nm was measured (Fig. 5A). | [
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PMC8992508 | These 6,7-dimethoxytetrahydroisoquinoline derivatives were modified on the anthranilic acid amide which was decorated with different functional groups (aromatic, heterocyclic or chain structures). | [
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PMC11767817 | Firstly, the effect of MK-2206 (8-[4-(1-aminocyclobutyl)phenyl]-9-phenyl-1,2,4-triazolo [3,4-f]naphthyridin-3(2H)-one dihydrochloride) on 5637 cell viability used in monotherapy was investigated. | [
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PMC11723947 | Since their initial approval in melanoma, these compounds have dramatically improved outcomes for cancer patients, including those suffering from hematologic malignancies. | [
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PMC11656048 | These data suggested that Nrf2 overexpression rescued ferroptosis and phenotypic changes induced by shikonin. | [
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PMC11564322 | mTOR and PPARγ proteins are involved in the mechanism of action of VGVAPG and VVGPGA peptides. • | [
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PMC9429973 | Patients who had previous BMAB experienced less pain. | [
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PMC11267036 | Increasingly studies reveal that DHM has the potential to mitigate some malignancies, including cholangiocarcinoma and esophageal squamous cell carcinoma by restraining EMT. | [
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"Increas... |
PMC11792090 | Monitoring of body weight ( Supplementary Figure S4B ) and H&E staining of major tissues ( Supplementary Figure S4C ) indicated that the high-dose injection of SAP UCAR-T cells did not raise any safety concerns. | [
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... |
PMC11731161 | Briefly, cell lysates from 5 × 10 cells were prepared with lysis buffer supplemented with protease inhibitors (Beyotime, China). | [
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PMC11539788 | D-E) western blot analysis of the levels of the RNF19A, ILK, and proteins involved in mTOR signalling in tumour samples from the LV-Control and LV-RNF19A groups. ( | [
{
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... |
PMC10890307 | Tumor cells cope with different gradients of oxygen tension, glucose, and glutamine. | [
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"O",
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... |
PMC5311252 | Lentiviruses were produced by transfecting plasmids into the virus packing cell line HEK293T together with Gag-pol/Rev/Envelope VsV-g pantropic plasmid (a gift from Professor Thomas Helleday Lab at Karolinska Institutet). | [
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"O",
"O",
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"O",
"O",
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"... |
PMC11190538 | The potent antitumor activity of C-phycocyanin reported in this study against HCT-116 and HepG-2 human cancer cells using the MTT assay with almost no cytotoxic activity towards the human healthy cell line (BJ-1) is of great interest. | [
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"... |
PMC10759659 | Our analysis revealed no significant difference in PD-L1 expression between the ARID1A deficiency and normal functioning groups. | [
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PMC9895440 | Cells were then strained through a 100 μm MACS SmartStrainer (Miltenyi) and washed using PBS with 2% FCS. | [
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"... |
PMC10887351 | β1-and β3-ARs were reported in cancer processes, where β1-ARs promoted increased lipolysis in cancer cachexia and β3-AR missense mutations correlated with obesity in BC in African Americans . | [
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"tags": [
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"O",
"O",
"O",
"O",
... |
PMC11540664 | Patients were divided into high- and low-L groups based on the median absolute count of peripheral blood lymphocytes. | [
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"O",
"O",
"O",
"O",
"O",
"O",
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... |
PMC4270159 | Please see Power Calculations for details. | [
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],
"tokens": [
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"for",
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]
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] |
PMC9635307 | The results were expressed as the means ± standard error of the mean (SEM). | [
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"O",
"O",
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... |
PMC11461874 | In b, the center line denotes the median value. | [
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"O",
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"the",
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]
}... |
PMC10999934 | 11,300 cells were divided into 20 separate clusters with resolution 0.8. ( | [
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"O",
"O",
"O",
"O",
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"cells",
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PMC11799978 | Therefore, targeting CAFs has become a promising new direction in cancer therapies. | [
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"O",
"O",
"O",
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... |
PMC9429973 | We followed all patients registered with newly diagnosed CLL in the Danish CLL Register or the Danish Cancer Register in the period 2002-2018 from 1 month after CLL-diagnosis until death or end of follow-up. | [
{
"tags": [
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC10898159 | Treatment with a specific ACK1 inhibitor AIM-100 or ACK1 siRNA markedly inhibits cell migration in imatinib sensitive and in imatinib resistant GIST cell lines, which is associated with inactivation of PI3K/AKT/mTOR and RAF/MAPK signaling pathways . | [
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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... |
PMC8143558 | L.D. Benson, Taraxacum officinale F. H. Wigg., | [
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"O",
"O",
"O",
"O",
"O",
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"tokens": [
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"Benson",
",",
"Taraxacum",
"officinale",
"F.",
"H.",
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".",
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]
}
] |
PMC11694066 | After 6 to 8 weeks, a partially homogeneous cell layer was obtained; from this primary culture, cells were washed with 1× PBS, dissociated in trypsin-EDTA solution (#25200056, Gibco), and seeded into a new culture flask for subsequent cell culture. | [
{
"tags": [
"O",
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11790971 | The three intensity-only channels (THG, SHG, and FAD) were collected using photon-counting PMTs (H7421-40, Hamamatsu) and time-resolved detection was used for the NAD(P)H channel in order to collect information on both intensity and fluorescence lifetime using a hybrid photodetector (PMA 40 Hybrid, PicoQuant) and a time-to-digital converter (HydraHarp 400, PicoQuant) for Time-Correlated Single Photon Counting (TCSPC). | [
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11621493 | In contrast to mammalian cells, PDAT reactions are well known in plants and yeast (39, 40, 41, 42, 43). | [
{
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
... |
PMC5963610 | The lower effect of this combination might results from a shorter persistence of the injected antibodies in circulation. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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"O",
"O",
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"tokens": [
"The",
"lower",
"effect",
"of",
"this",... |
PMC11701801 | Strategies for cancer treatment based on the synthetic lethality between paralogs targeting one paralog in cancers with a mutation of another paralog have been proposed by many groups (10, 37–45). | [
{
"tags": [
"O",
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"O",
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... |
PMC10812665 | Correlated activity scores were calculated on the Wald statistic (stat) using the weighted mean for all experimental conditions. | [
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"tags": [
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"O",
"O",
"O",
"O",
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],
"tokens": [
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PMC11741906 | Moreover, several studies investigated the expression of miRNAs and linked the expression changes with resistance to chemotherapy [, , , ]. | [
{
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"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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"tokens": [
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PMC6948907 | The MTT assay for determination of IC50 values for VPA with certain concentrations of VPA (0, 1, 5 and 10 μM/lit) which was dissolved in phosphate-buffered saline (PBS) was done. | [
{
"tags": [
"O",
"O",
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"O",
"O",
"O",
"O",
... |
PMC9119314 | Drug susceptibility assays were set up in 96-well, flat-bottom microplates in a final volume of 200 μL, as described previously (van Schalkwyk et al., 2017). | [
{
"tags": [
"O",
"O",
"O",
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"O",
"O",
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"O",
"O",
"O",
"O",
"O",
... |
PMC4277423 | Most of the mutants contained deletions of −5 to −24 nucleotides. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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... |
PMC11464982 | Batch used for the in vitro micronucleus test. | [
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"O",
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"O",
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],
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PMC10778532 | Using western blot, we confirmed the absence of expression of ZHX2 in cells transfected with the mix of siRNA ZHX2 (Figure 3A and Figure S2). | [
{
"tags": [
"O",
"O",
"O",
"O",
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"O",
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... |
PMC11351758 | Cyclosporin A and its non-immunosuppressive analog N methyl-Val-4 cyclosporin A (PKF220-384) both inhibit opening and prevent the translocation of cyclophilin D from the matrix to the membranes of cortical mitochondria . | [
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"O",
"O",
"O",
... |
PMC11760643 | Briefly, tissue culture supernatant (TCSN) was collected from clone L4 and MPC‐11 cell lines. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
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"tissue",
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"supernatant"... |
PMC9429973 | Infection occurred more frequently on pacritinib versus BAT, though fungal and viral infections occurred less frequently, as did Herpes Zoster reactivation (pooled pacritinib: 0/100 patient-years vs BAT: 2.4/100 patient-years, including ruxolitinib: 5.5/100 patient-years). | [
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11750712 | Exclusion criteria are: general exclusion criteria: patients with T cell leukemia; females who are pregnant or lactating; prior treatment with investigational gene therapy or approved gene therapy or genetically engineered cell therapy product or allogeneic stem cell transplant; known history or presence of clinically relevant CNS pathology such as epilepsy, paresis, aphasia, stroke within prior 3 months, severe brain injuries, dementia, Parkinson’s disease, cerebellar disease, organic brain syndrome, uncontrolled mental illness or psychosis. | [
{
"tags": [
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"O",
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"O",
"O",
"O",
"O",
"O",
... |
PMC11543853 | The images show 1.66 nm-thick tomographic slices of rhinovirus 2-infected cos-7 cells seven to sixty minutes post-infection. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
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"B-CellLine",
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"tokens": [
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"images",
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"nm-thic... |
PMC9429973 | Nonhematologic grade 3/4 TEAEs in ≥2 patients included pneumonia (17%), lung infection (13%), and hyperglycemia (9%). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11774112 | Then, H-His (Trt)-OH was added for the reaction, and TBDMS-polylactic acid-His (Trt)-OH was obtained after an overnight reaction. | [
{
"tags": [
"O",
"O",
"O",
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"tokens": [
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"... |
PMC11703992 | Gene Expression Omnibus (GEO) (http://www.ncbi.nlm.nih.gov/geo) was searched for datasets. | [
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"O",
"O",
"O",
"O",
"O",
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"O",
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"tokens": [
"Gene",
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PMC9368503 | There was no discernible pleomorphism. | [
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"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"There",
"was",
"no",
"discernible",
"pleomorphism",
"."
]
}
] |
PMC11798926 | For antibody feeding experiments, myc-SynDIG1-Flag transfected cells were incubated with α-Flag antibody at 37°C for 60 min. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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"O",
"O",
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],
"tokens": [
"For",
"antibody",
"feeding",... |
PMC11739696 | These nanoparticles exhibit high surface area-to-volume ratios and distinctive electronic properties, which make them suitable for various applications, including catalysis, energy storage, and biomedical uses. | [
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"tags": [
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC10969097 | The trial intended to investigate the combination of PSK (Krestin polysaccharide) treatment with docetaxel, a chemotherapy drug. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
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],
"tokens": [
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"intended",
... |
PMC10667689 | Further investigation is required, not only for all the questions that remained unanswered in our limited study (such as the probable role of TIM-3 in lipolysis in the HL-60 cell line, the role of TIM-3 in other aspects of glucose and lipid metabolism, or the effect of TIM-3 on other metabolic pathways), but also to clarify the effect of TIM-3 on the metabolism of other immune cells, other AML subtypes, and primary AML cells, as well as in a co-culture system with other cells (to recreate the bone marrow microenvironment and cellular interactions) and in vivo models and clinical studies. | [
{
"tags": [
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC7294030 | Cells were stained with annexin V-FITC (recombinant annexin V protein conjugated to green fluorescent FITC dye) and PI for 10 - 15 min at room temperature in the dark. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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... |
PMC11604768 | Here, we leverage the experimental principles of these high throughput formats to create a powerful tool to easily quantify responses of synthetic promoters that serve as downstream transcriptional readouts of specific upstream signaling events in mammalian cells. | [
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... |
PMC11786600 | The results are expressed as mean ± standard deviation (n = 3). | [
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PMC9429973 | Compared with the non-T691s UL54 mutation, the patients with T691S mutation also had similar results. | [
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PMC10745221 | Additionally, human embryonic kidney 293T cells have multiple proteins with ADMA between 20kDa and 250 kDa, as well as three SDMA-containing proteins near 15 kDa, 20 kDa, and 30 kDa . | [
{
"tags": [
"O",
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PMC9621239 | Sn, Shannon entropy. | [
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"O",
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"O",
"O",
"O"
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"tokens": [
"Sn",
",",
"Shannon",
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] |
PMC8358006 | Together, our results demonstrate that the biological nature of GSDs tend to be chromatin looping and relevance to the coordinately regulation of functionally related genes. | [
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"tags": [
"O",
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"O",
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"O",
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... |
PMC10547921 | Although NAMPT inhibitors are potent cytotoxic molecules, their use as chemotherapeutic drugs in cancer treatment is hampered by their toxicity. | [
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"O",
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"tokens": [
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... |
PMC11754094 | b, Comparison of length bias according to type of DNA polymerase and PCR cycle. | [
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"tags": [
"O",
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"O",
"O",
"O",
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"tokens": [
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PMC11591038 | It was demonstrated that the knockdown and overexpression of HIF-1α, respectively, reduced and increased neuroglobin levels, consistent with a causal relationship between HIF-1 and neuroglobin induction . | [
{
"tags": [
"O",
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"O",
"O",
"O",
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... |
PMC9429973 | Median survival was 24 years and not reached for SVT+ and SVT-, respectively (p=0.1). | [
{
"tags": [
"O",
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"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
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"tokens": [
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... |
PMC11754784 | P < 0.0001. | [
{
"tags": [
"O",
"O",
"O",
"O"
],
"tokens": [
"P",
"<",
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PMC11760643 | Conversely, numbers of non‐classical monocytes did not differ between both treatment groups (p = 0.14; Figure 4U). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
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"tokens": [
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",",
... |
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