PMCID string | Sentences string | ner list |
|---|---|---|
PMC10955424 | Consequently, inhibition of FASN in cisplatin resistance OC cells resulted in resistance mitigation . | [
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PMC11271278 | Although several of the identified oncogenes such as MYC, ETV1, and CCND1 have been previously linked to enhancer hijacking, we identified their novel hijacked enhancers that are cancer type specific. | [
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PMC11435360 | Moreover, VEGF cells were further reduced in the BBN PAG + GEM group compared to the BBN PAG group (p < 0.05, Figure 4E). | [
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PMC9688728 | After thawing, the cells were cultured in DMEM/F12 supplemented with 10% fetal bovine serum and 100 units/mL penicillin/streptomycin (all from Gibco, Waltham, MA, USA) in a humidified CO2-incubator under standard conditions (5% CO2, 37 °C, 100% humidity). | [
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PMC9429973 | GFI1B aberrations are linked to inherited bleeding disorders, resulting in macro-thrombocytopenia, gray platelets and increased expression of CD34. | [
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PMC8956657 | Firefly luciferase values were normalized to Renilla luciferase values. | [
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PMC10831439 | The cytotoxicity of the effector cells was assessed in three technical replicates. | [
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PMC10926885 | To forecast miRNAs upstream of NDE1, we collected data from miRDB, miRWalk, miRabel and TrgetScan. | [
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PMC9429973 | For patients with a HES-related hospitalization, the mean (SD) length of stay (LoS) was 11.0 (9.4) days. | [
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PMC9429973 | Moreover, for the first time, we established AITL patient-derived organoid models that can be stablely cultured in vitro. | [
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PMC7171147 | GAPDH was used as a loading control. | [
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PMC11011837 | This opens the possibility of designing experiments to directly verify and confirm the obtained results in patients. | [
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PMC11052306 | In this review article, we present an overview of the use of a particular Schiff base, namely pyridine–imine, linked to the surface of dendrimers, suitable for complexing copper, and the use of such dendrimer complexes in biology, in particular against cancers. | [
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PMC9429973 | While TNF-α 238 GA, AA, and GG account for (54.5, 39.5, and 6% respectively). | [
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PMC5173112 | In current study, we showed that USP21 binds to the promoter region of IL-8 gene and regulates its transcriptional activity. | [
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PMC9545474 | HRMS‐ESI: calculated [M+H] 910.92807 m/z, found 910.92698 m/z. [( | [
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PMC9429973 | Overall outcomes are excellent with intensive regimens, consolidated with or followed by ibrutinib; however, there are treatment-related toxicities emphasising the need for a tailored approach. | [
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PMC11795610 | Some studies have demonstrated that selective activation of TRPV4 in mice was able to accelerate skin barrier regeneration, while knockout of TRPV4 resulted in impaired skin barrier and abnormal differentiation in AD. | [
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PMC9622879 | Moreover, local energy trading was not supported in this community. | [
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PMC7504302 | High-throughput RNAi and CRISPR screens provide a tremendous opportunity for the systematic characterization of cancer dependencies. | [
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PMC11564322 | In the case of the MEG-A2 cell line, it has been shown that the mTOR protein expression decreases during differentiation into megakaryocytes . | [
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PMC9318744 | These results demonstrate that our ACE2plucC3 cell model can be used to evaluate antiviral drugs and potentially developed for high-throughput screening. | [
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PMC8753818 | Flow cytometric cell cycle analysis on asynchronous cells showed that compared with the native CHO-K1 cell line, the CHO-KO cell line had a 10% higher proportion of cells in the G2/M phase and a 3% higher proportion of cells in the G0/G1 phase (Fig. 2).Fig. | [
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PMC11676674 | Statistical analysis was performed using GraphPad Prism Ver.7. | [
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PMC8524093 | Pregnant IFN-α/βR mice at 16–18 days of gestation were infected with 20 pfu of CHIKV via the intradermal route. | [
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PMC11347429 | The main responses for up-regulated genes encompass interferon-stimulated genes and chemokine/cytokines. | [
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PMC11295144 | Our results indicate that the intracellular TM3-4 loop of the γ2 subunits is required for the cooperativity between GABAARs and NL2 in synaptic formation but also for the association between GABAARs and NL2. | [
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PMC11637284 | In a next step we zoomed into the putative TAC60 and p166 interacting region of T. brucei and compared it with other Kinetoplastid species. | [
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PMC11594588 | In the inactive state, GDP is bound to the α subunit. | [
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PMC11700247 | CD45.2/CD3/CD45.1 T-cell infiltration in irradiated and abscopal tumor representing CART-19 cells. ( | [
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PMC9429973 | Ocular findings were consistent with known epithelial keratopathy of ADCs and were generally low grade and resolved to ≤ Grade 1 with dose interruptions and/or reductions. | [
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PMC11530949 | These bimetallic NPs' constituent metals have synergistic effects that enhance their biological properties, including antibacterial, optical, catalytic, electrical, thermal, and magnetic properties (26, 27). | [
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PMC11534377 | Furthermore, to minimize the occurrence of false positives, we implemented the Benjamini-Hochberg procedure, a well-established method for controlling the false discovery rate (FDR). | [
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PMC11787651 | Now, a packet of fragment ions is collected and pulsed into the accelerator so that they are uniformly received in the accelerator prior to MS analysis. | [
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PMC11087301 | This study introduces catulin as a potential linker between pathways leading to breast cancer cell invasiveness which interacts with different CSC and cell adherent molecules . | [
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PMC11721064 | In addition, due to the possibility of early transdifferentiation, a portion of the progenitor cell population may be transforming into CK12 positive cells (Additional file 1: Fig. S3D).Further enrichment analysis indicated that corneal cell clusters were primarily enriched in pathways, including IL6/JAK/STAT3, PI3K/AKT/mTOR, and Notch signaling (Fig. 5B). | [
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PMC11591794 | It was centrifuged sequentially at 12,000× g for 30 s. RNAs were loaded onto the column and centrifuged first with washing solution 1, then twice with washing solution 2, at 12,000× g for 30 s at each stage. | [
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PMC9341513 | A more focused view of chromatin interactions at gene promoters is shown in simulated 4C interaction profiles (Fig. 2C; we take a 1-kbp region immediately upstream of a gene's transcription start site [TSS] to be its promoter). | [
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PMC10507284 | The meta‐analysis of TROAP prognostic value was based on TCGA, TARGET, GSE21050, GSE30929, and GSE71118 (n = 1109). | [
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PMC11496728 | Gene sequence optimization can adjust the GC content of genes, prevent base repeats, eliminate restriction endonuclease recognition sites, and avoid similarities to important RNA motifs located in open-reading frames, as they may cause ribosomal pause that interferes with mRNA processing and translation, apart from factors such as CpG content and TATA cassette. | [
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PMC11345828 | C. Overlay of 9 (green) and 18 (cyan) with Mcl-1 protein, π-stacking interaction with R263 (magenta) and hydrogen bonding interaction with N260 (magenta). | [
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PMC11536589 | These inhibitors have now been approved by the FDA (Huang et al. 2021; Ou et al. 2022). | [
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PMC11697065 | Overall, we conclude that heterogeneity even among related clones represents a confounding effect that obscures biological signatures associated with high productivity. | [
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PMC4277423 | Furthermore, individuals with a homozygous CCR5Δ32 deletion are highly resistant to HIV-1 infection –. As a result, CCR5 has been one of major targets for drug and genetic intervention against HIV-1 infection . | [
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... |
PMC5311252 | Spectra were then searched using MSGF+ (v10072) and Percolator (v2.08), where eight subsequent search results were grouped for Percolator target/decoy analysis. | [
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PMC3888431 | Recent studies have shown that a combination of de novo and reference-based strategies yields the best outcome for transcriptome assemblies . | [
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PMC11679326 | Proteins with oligomannose glycans are then transported to the Golgi apparatus, where the α1,2-mannosidases are used to trim the α1,2-linked mannose residues, resulting in the formation of mannopentose glycans (Figure 1a). | [
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PMC9429973 | All patients will receive standard premedication before each injection with antihistamine, corticosteroid (methylprednisolone or equivalent) and paracetamol. | [
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PMC11774747 | Fourteen patients with r/r Hodgkin’s lymphoma were treated using escalating doses of CD30.CAR-EBVSTs. | [
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PMC9429973 | Additional publicly available mRNA-seq data (n = 1,160) were used for quality control modelling. | [
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PMC11700165 | Recently, a second patient was documented. | [
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PMC11750712 | The surface assay follows a lyse wash protocol, for each sample a fluorescence-minus-one control was generated to determine CAR positivity. | [
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PMC11470999 | However, knockdown of VHL rescued PF‐induced CIP2A downregulation (Figure 6B,C), indicating that PF likely mediates CIP2A degradation through VHL. | [
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PMC10125312 | Identifying potential obstacles at the in vitro level of development, such as toxicity to nontarget organs either from the nanomaterial or from light treatment, allows for changes and refinement of the technique without the need for large cohorts of animals. | [
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PMC11679892 | This supports the anticancer potential of the extract. | [
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PMC10759659 | Images were visualized using chemiluminescent horseradish peroxidase substrate (WBKLS0100; Merck Millipore) on Bio-Rad Gel Doc 2000 system analysis software (Bio-Rad Laboratories, Inc., Hercules, CA). | [
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PMC11577421 | BSA, fluorescein isothiocyanate (FITC), FBS, ethylenediamine, citraconic anhydride, MTT reagent, MTX, Ham’s F-12 culture medium, and DMEM culture medium were from Sigma-Aldrich (Brazil). | [
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PMC11389534 | It has been demonstrated that UFSP2 is the main ‘deUFMylation’ enzyme compared with the inactive UFSP1. | [
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PMC11391695 | Preparation of compounds comprising SK-Hep-1 cell vesicles and PEI nanoparticle complexes. | [
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PMC10380508 | Among these subtypes, kidney renal clear cell carcinoma (KIRC), kidney renal papillary cell carcinoma (KIRP), and kidney chromophobe carcinoma (KICH) are the most common. | [
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PMC11548041 | Nanovesicles can be functionalized with aptamers. | [
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PMC4270159 | All data obtained from the experiment—raw data, data analysis, control data and quality control data—will be made publicly available, either in the published manuscript or as an open access dataset available on the Open Science Framework (https://osf.io/h0pnz/). | [
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PMC10919056 | Differential expression of GJA5 in ccRCC in the GEO database. ( | [
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PMC10452486 | The genes encoding the heavy chains of these two classes of HLA are closely linked to each other on the short arm of chromosome 6, whereas the gene that encodes B2m is on chromosome 15. | [
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PMC9672323 | Furthermore, while dexamethasone reduced the proliferation of PBMCs, piroxicam had no adverse effect on the proliferation. | [
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PMC11519567 | I Quantification of SS18-EGFP and SS18-SSX-EGFP in FRAP experiments in (H). | [
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PMC11806182 | F Heatmap depicting the relationship between four co-expression modules and miR-424. | [
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PMC6771295 | Representative western blot is shown. | [
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PMC10938336 | Docked complexes of CASP3 protein along with their strongest binding compounds. | [
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PMC11739484 | Correlation analyses, including Spearman’s rank or Pearson’s correlation coefficient, were applied for associations between MMP expression and clinicopathological or immune-modulator variables. | [
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PMC11726848 | However, it should be noted that dose-rate effects are not entirely straightforward, e.g., there are variations in dose-rate susceptibility among different tumors . | [
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PMC11680578 | < 0.001 as compared to that of the RGZ alone. | [
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PMC6771295 | The specific primary antibodies for β-Actin (Abcam), Beclin-1 (Cell Signaling), LC3 (Cell Signaling), SIRT1 (B-7, Santa Cruz Biotechnology), SIRT3 (C73E3, Cell Signaling), SIRT5 (D5E11, Cell Signaling), and anti-Flag M2 (Sigma Aldrich) were diluted 1:2,000 in 5% skimmed milk in Tris-buffered saline-Tween (TBS-T). | [
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PMC9046263 | HERV elements are identifiable by the presence of established retroviral genes: gag (core structural proteins), pol (viral replication enzymes including reverse transcriptase), pro (viral protease), env (envelope protein) and LTR (Long Terminal Repeats). | [
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PMC8469018 | Then, the stained cells were centrifuged at 400× g for 5 min and washed twice with PBS. | [
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PMC11759543 | In this study, we combined vorinostat and doxorubicin for the treatment of bladder cancer in both in vitro and in vivo. | [
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PMC3019555 | Immunoblot of HIF-1α and actin from MCF7 cells treated as in A and exposed to normoxia (N) or 4-h hypoxia to visualize HIF-1α protein. | [
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PMC9429973 | Remarkably, IgHV1-69 was the most prevalent IgHV subgroup in Kazakhstan U-CLL patients (40%). | [
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PMC11487720 | In this study, we aimed to uncover a novel aspect of cell death mechanisms by investigating the interaction and relocation of WWOX and TRAF2 under UV/cold shock exposure. | [
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PMC9429973 | Between November 2021 and February 2022, 472 downloads were documented on one of four platforms. | [
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PMC9429973 | Summary/Conclusion: Our findings show the independed prognostic value of TP53 pathogenic variants in pediatric B-NHL patients treated with rituximab-based reduced-intensity therapy. | [
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PMC9429973 | At the time of assessment (median 4.8 months after the 2 vaccine) anti-spike antibodies were detected in only 42% (N = 29) of patients. | [
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PMC10125312 | In another work, Xia et al. studied the cytotoxicity and uptake of AuNS in hepatic cell lines. | [
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PMC10094992 | MPM is a highly complex tumour, not only to treat but also to understand, due to the involvement of different players in the tumour organization and in the principal pro-tumoural functions . | [
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PMC11700165 | SYK comprises N-terminal, tandem SRC homology 2 (SH2) domains connected via the linker-A region, while the linker-B region joins them with the C-terminal kinase domain. | [
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PMC9268183 | Other pharmacological activities, such as antioxidant capacity by scavenging reactive oxygen, are important in preventing potential damage to cellular components such as DNA, proteins and lipids. | [
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PMC10654497 | Recent studies have shown that ferroptosis is closely related to the pathophysiological mechanisms of various diseases, including cancer, diseases of the nervous system, kidney damage, ischemia-reperfusion injury, and blood disorders. | [
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PMC11617590 | Statistical significance was based on the difference compared with 0 μM SFN by two‐way analysis of variance (ANOVA), followed by the Bonferroni test (n = 3) (**p < 0.01, ***p < 0.001). | [
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PMC11714165 | The nanoparticles demonstrate the ability to effectively suppress both osteoclast differentiation and tumor cell growth by inhibiting the NF‐κB signaling pathway, thereby disrupting the vicious cycle in the osteosarcoma microenvironment. | [
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC10443665 | It has been reported that GT from different species of Astragalus consists of 2 fractions. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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],
"tokens": [
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... |
PMC11743975 | For cells only transfected with Tom20-CIBN-GFP, the GFP-labeled mitochondria rarely changed before and after 60 min of blue light illumination (Figure 2A, Supplementary Video S1). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9429973 | Aims: Given the crucial role for γc cytokines in the development and function of lymphocytes, modulating their activities may offer therapeutic potential in a range of immune-mediated diseases. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9429973 | The AFVI exhibited spontaneous reversal over several years after discontinuation of ineffective combination immunosuppressive therapies and subsequently a successful pregnancy. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"AFVI",
"exhibited",
... |
PMC11604768 | Resulting TRE unit sequences were compared to the expected sequences using Starcode. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Resulting",
"TRE",
"unit",
"sequences",
"were",
"compared",
"to",
"the",
"expect... |
PMC11224020 | cPLA2 is in gray, and nuclei are in red; scale bar, 10 µm. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"cPLA2",
"is",
"in",
"gray",
",",
"and",
"nuclei"... |
PMC9429973 | The type of the immunosuppressive regimen is the most important reason of decreased CMV-specific CD8+ immune response following allo-HSCT. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"type",
"of",
"t... |
PMC10955424 | Therefore, we analyzed the ascites unique tumor microenvironment to investigate platinum chemoresistance and potential measures to overcome it. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Therefore",
",",
"we",
"analyzed"... |
PMC11587606 | When Dox was withdrawn and the cell cultures maintained for another 96 h (Dox±), RHBDF1 protein levels decreased substantially, while that of E-cadherin, Occludin and ZO-1 protein levels were restored to levels similar to those under Dox-off conditions (Fig. 1F). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11359735 | Red bars indicate the means of each group. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Red",
"bars",
"indicate",
"the",
"means",
"of",
"each",
"group",
"."
]
}
] |
PMC9429973 | Firstly, by describing the major differences in interactions between the amino acids in the vicinity of the mutation spot. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Firstly",
",",
"by",
"... |
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