PMCID string | Sentences string | ner list |
|---|---|---|
PMC9429973 | Moreover, the Combination of chidamide with ABT-199 induced the up-regulation of apoptotic proteins, Bax and cleaved caspase-3, and down-regulation of anti-apoptotic protein, Mcl-1 compared to that of either single drug control (Fig. 1D). | [
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PMC10547921 | The STING-mediated type I interferon signaling pathway is a major discovery in the field of natural immunity, providing a new target for tumor immunotherapy. | [
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PMC10048572 | One LOH at the D10S1248 locus (10q26.3) was found in only one of the 350 clones (0.29%). | [
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PMC3888431 | Two web-based interfaces were established to allow users to browse the complete transcriptome data set by different means. | [
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PMC11188874 | B, Effect of sgRNA targeting HDAC6 on proteasome ChT-like activity in MMCLs. | [
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PMC10551595 | Eventually, the total cytoplasmic RNA and cellular proteins were extracted using TRIzol and assessed using (A) real‐time PCR or (B) western blotting. ( | [
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PMC9622879 | The security for a system-centric CEMS may be a potential field for future studies. | [
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PMC11782508 | Briefly, cells were seeded at a density of 10 cells per well in a 96-well plate and incubated at 37 °C for 24 h. Serially diluted azurin solutions were prepared in RPMI 1640 medium (Sigma-Aldrich, USA) supplemented with 2% fetal bovine serum (FBS). | [
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PMC11243198 | However, we did identify two closely related but inactive analogs (BAS 06103407 and BAS 07018849) that maintain the p-diaminobenzene core but are missing the pyrrolidine ring (Figure 7). | [
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PMC6889484 | Two CEMSS/D128K clones are shown with lower A3G-D128K levels (0.35× and 0.70×) compared to endogenous A3G expressed in CEM cells (1×). | [
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PMC9429973 | Constitutional (82%) and neuropsychiatric (68%) symptoms were most frequently experienced across all respondents in the week prior to survey completion. | [
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PMC4485648 | We specifically focused on the HIF pathway and demonstrated that SFN can reduce the protein levels of HIF-1α in hypoxic A2780 cells without affecting its transcription and stability. | [
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PMC11543853 | The total RNA was isolated according to the manufacturer’s instructions (Roche). | [
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PMC9429973 | These data are very encouraging and demonstrate the capability of single center local medical institution to develop, manufacture and deliver in-house CART. | [
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PMC9250505 | It is recognized that sub-lethal apoptotic stresses trigger a caspase-dependent increase in γ-H2AX expression. | [
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PMC11591030 | Finally, we examined whether AOP alleviate oxidative injure in PBLs by regulating the TLR4/NF-κB pathway. | [
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PMC8753818 | Accordingly, in the study at hand, we aimed to identify the mechanisms by which caspase-7 affects cell growth, cell viability and cell cycle progression and investigate the effect of caspase-7 silencing on the expression yield of recombinant protein. | [
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PMC11126803 | Cells suspended in DMEM media were first mixed with 10× reconstitution buffer, 1:1 (v/v), and then with soluble rat tail type I collagen (Corning) to a final concentration of 6 mg/ml. | [
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PMC11438317 | Upon TCR engagement, SLP76 is phosphorylated by LCK and ZAP70 , and associates in complexes called microclusters, in which some of the proteins here studied as LYP substrates, for instance, Vav1 and FYB, also participate . | [
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PMC11765988 | Disruptions in antioxidant defense systems, such as glutathione, superoxide dismutase, and paraoxonase-1, are linked to disease development. | [
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PMC11742231 | In comparison, the baseline models adhere to the same parameter settings. | [
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PMC10135767 | At least 15 typical calcium signaling events of the firmly adhering cells were collected among three repeat experiments for each group. | [
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PMC11673128 | In fact, short-term TKIs administration (i.e., crizotinib 0.5 μM, lorlatinib 0.1 μM) was sufficient to upregulate CALR, allegedly becoming the main trigger of phagocytosis, since the number of apoptotic and dead cells at these TKIs concentrations was statistically irrelevant (Figures S2 and S3). | [
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PMC11337594 | It has been reported that certain chemotherapeutic agents can induce cellular pyroptosis through the activation of the CASP3-GSDME pathway . | [
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PMC9429973 | Overall these patients had a dismal outcome with short median survival at 3.0 months, death was not only from infection but also from underlying disease. | [
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PMC11731614 | The spectral counts for each protein accession ID for the three RD and HFD biological replicates are used to run a one-tailed, paired t-test for statistical significance. | [
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PMC11604768 | We anticipate the library becoming a powerful tool for studying GPCR signaling. | [
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PMC11365427 | Arginine deprivation can result in the death of various tumor cells, and drugs targeting arginine consumption have been used in clinical trials for tumor treatments. | [
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PMC11264242 | The resulting SS18-SSX fusion oncoprotein participates in both positive and negative regulation of gene expression, which subsequently leads to the activation of oncogenic pathways and the inhibition of tumour suppressor pathways (Nielsen et al., 2015). | [
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PMC9966931 | In the case of C. gloeosporioides, all candidates showed strong antifungal activity at all concentrations tested. | [
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PMC11621493 | We did not observe any significant changes between genotypes under basal conditions (supplemental Fig. S8A). | [
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PMC11279397 | The tricyclic sesquiterpene patchouli alcohol (PA) has been reported to possess a wide range of health-promoting activities, including antiviral effects against influenza , antidepressant properties , tissue-protective effects against injury , vascular relaxation abilities , lung and brain protective actions , anti-ulcer and anti-colitis activities , potent anti-inflammatory effects , potential anticancer properties as well as protective effects against metabolic diseases . | [
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PMC11240052 | Error bars represent the mean of three separate determinations ± standard deviation (SD). ** | [
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PMC11089031 | For the cell proliferation assay, transfected cells were seeded into a 96-well plate at 10,000 cells per well, with 8 wells for each condition (siRNA vs. NC). | [
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PMC8711270 | These PTMs are required for therapeutic glycoproteins such as Drotrecogin alfa and recombinant factor IX respectively (Dumont et al., 2015). | [
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PMC11748335 | All calculations of ChIP-seq intensity for specific regions were performed using computeMatrix software, which processed the BigWig files. | [
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PMC11697703 | Quantification in electroporated neurons (E-Cells S1) and adjacent non-electroporated neurons (NE-Cells S1) in the somatosensory cortex, non-electroporated neurons in motor cortex (NE-Cells M), and non-electroporated neurons in the somatosensory area contralateral to the electroporation (NE-Cells S1 Contra). ( | [
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PMC11461025 | After a 48 hour incubation period, cells were treated with DMSO (control), isogingketin (25-100 µM), or staurosporine (1µM) for 24 hours. | [
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PMC9268620 | The cytotoxic concentrations of nordamnacanthal and damnacanthal against several different normal and T-lymphoblastic leukemia cell lines ranged from 1.7 to 30 μg/mL (Table 1). | [
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PMC11746948 | The samples were then equally divided into two parts and incubated with 50 μl of 1 M hydroxylamine or a negative control (1 M NaCl) respectively at room temperature for 2 h. The protein was precipitated with chloroform/methanol/water (v/v 1:4:3), briefly air-dried, and dissolved in 200 μl of lysis buffer. | [
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PMC11783017 | Fig. 6Evaluation of in vivo antitumor performance in subcutaneous K7M2-bearing OS model using injectable hydrogels. ( | [
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PMC11307990 | Therefore, it is critical to establish comprehensive strategies to improve the integrated delivery of SUN to tumor cells. | [
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PMC11770130 | h, i Expression levels of UPR-related genes in the primary adipocytes upon the combinational treatment of NTS and RhoAa (h) or RhoAi (i); n = 4. | [
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... |
PMC9429973 | Here we present results for Group 1. | [
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PMC8873393 | Gene set enrichment analysis was also performed to functionally scrutinize the transcriptional changes upon UV irradiation in different cellular compartments. | [
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PMC11720107 | The reverse transcription reaction was performed according to the manufacturer’s instructions (ThermoFisher, Waltham, MA, USA) in a final volume of 20 μL, using 800 ng of RNA as the cDNA template. | [
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PMC11412721 | The quality of RNA was checked with Bioanalyzer Agilent 2100 and RNAs with a RIN (RNA integrity number) > 6 were retained for further analysis. | [
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PMC11297139 | i Representative immunohistochemistry images of extracted tumors formed by the four cell lines. | [
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PMC11574271 | An empty lentivirus vector package was used as a negative control to generate J82-NC cells. | [
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PMC11772449 | P38γ can be activated when the external environmental pressure changes, or under the action of mitotic signals. | [
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PMC11760643 | LDH release was assessed using a 96 Non‐Radioactive Cytotoxicity Assay (Promega) according to the manufacturer's instructions. | [
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PMC9503685 | In addition, there are problems and concerns that may be encountered in clinical practice, such as toxicity and immunogenicity, drug resistance, hemolytic activity, and other side effects. | [
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PMC10547921 | There is a close complementarity at the interface between the drug and the DNA minor groove which spans the entire binding site in the refined structures of the complex. | [
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PMC11697703 | Scale bars, 0.5 μm. | [
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PMC11224020 | We observed that most NLS–GFP-expressing DCs confined at a height of 2 µm underwent nuclear envelope rupture followed by repair events, as evidenced by the transient leakage of NLS–GFP signal into the cytoplasm (Fig. 2h and Supplementary Video 3). | [
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PMC7642379 | PCA plot showing the separation in expression pattern between samples. ( | [
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PMC10938336 | These genes represent potential molecular targets for the compounds, suggesting their roles in mediating the compounds’ anticancer properties. | [
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PMC9429973 | Methods: All patients diagnosed with BIA-ALCL since 1997 were identified in in the Netherlands Cancer Registry (NCR) with survival follow-up through February 1, 2021. | [
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PMC8343815 | When the formazan crystals were formed, the contents of the wells were discarded, and 100 μL dimethyl sulfoxide (DMSO) was added to wells to dissolve the resulting formazan crystals. | [
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PMC10203589 | FGF18 is a pleiotropic growth factor that stimulates the proliferation of interstitial and epithelial cells and tissues in a variety of organs, such as lung, liver, stomach, colorectum, brain, ovary, and embryo. | [
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PMC10669966 | Most WDLPS/DDLPS tumors have increased MDM2/CDK4 expression, due to an amplification in the chromosome 12q13-15 region . | [
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PMC8875242 | Additionally, more inhibitors are identified when using digoxin as the ABCB1 probe substrate than when using RHD123. | [
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PMC11351758 | The dye-loaded cells were then mounted in a cell chamber for conventional or laser-coupled imaging microscopic observation. | [
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PMC11576293 | For C26H24N2O3SCl (M + H) 479.11907; found 479.12000. | [
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PMC11576293 | 2H, Ar-H, J = 7.8 and 8.1 Hz), 7.06 (m, 3H, Ar-H), 3.91 (overlap singlets, 6H, 2 OCH3) 2.73 (s, 3H, SCH3); C NMR (75 MHz, CDCl3) δ (ppm) = 172.5, 164.2, 164.1, 162.1, 160.1, 138.6, 129.8, 129.3, 128.8, 119.6, 116.5, 114.2, 112.6, 107.2, 55.4, 14.4; HRMS (ESI+) calcd. | [
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PMC11310713 | Herein, we introduce a minimally invasive method by injecting micro-sized cell-laden hydrogel beads. | [
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PMC9429973 | The DEK-NUP214 fusion transcript was confirmed by Sanger sequencing. | [
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PMC9429973 | OS rates were significantly higher in intensively treated patients with trisomy 19 as sole abnormality or within a karyotype characterized by trisomies only (P=0.05). | [
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PMC9872547 | In previous studies, the capability of nano-curcumin to induce cancerous and undifferentiated cell apoptosis was detected in a time and dose-dependent manner, while on normal cells, no significant effects were observed (6, 31, 34). | [
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PMC11344246 | Taken together, these results indicate targeting CDC20 may only be relevant to particular molecular subtypes of MOC, and even then, an improved inhibitor that is effective at less toxic doses is likely a prerequisite for any future clinical utility in this disease. | [
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PMC11291697 | Here we expanded the previously described phenotype and provided further insights on the potential functional consequences of GTDC1 disruption. | [
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PMC9429973 | Further simulations suggested that it is the downstream epigenetic changes which drive the 3D structural changes, rather than the genomic rearrangement itself. | [
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PMC11544771 | Therefore, our observations suggest that the combination of CPX/PRE may represent a potential tumor-selective therapeutic approach. | [
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PMC11721587 | Following a centrifugation at 800g for 10 min, the resultant supernatant was collected as cytoplasmic fraction. | [
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... |
PMC10033453 | The MorV G protein could use another LDLR family member or another cell surface entry target, given the distinctions between genetic sequences of MorV G and VSV G. Receptor availability is unlikely to be the cause of variable cell death between cell lines since the virus was able to infect and replicate across all sarcoma cell lines tested, as evidenced by similar titers of infectious VMG 24 hpi with MOI 0.1. | [
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PMC9712534 | TOP2B is expressed throughout the cell cycle and is present in both proliferating and non-dividing cells. | [
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PMC11786704 | Mice with sustained blood glucose levels above 250 mg/dL were considered diabetic mice. | [
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PMC11748335 | IGF2BP1 is an OG, with more than half of its length located in S-PMDs Features of H3K27me3 long LOCKs. | [
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... |
PMC11794847 | After a 4 h, cells can be harvested and analyzed for desired activation markers or further downstream assays. | [
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PMC9429973 | Image: Summary/Conclusion: A quadruplet regimen ACTIVE + G demonstrated high efficacy in this small group of R/R FLT3m AML patients irrespective of their prior exposure to FLT3 inhibitors or Venetoclax. | [
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PMC11634794 | Subsequently, the multivariate COX regression model was employed to assess the impact of LAMP1 expression level, T and M stages, clinical stages, and nuclear grades on patient prognosis. | [
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PMC11047729 | Recent studies also indicate their antitumor properties . | [
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PMC11775197 | It has been documented that the endogenous ligand 13(S)hydroperoxy octadecadienoic acid [13(S)HpODE] plays a role in colorectal tumor cell apoptosis through the MAO-A > ROS > P53 > p21 axis upon activation of PPARγ . | [
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PMC11721587 | Scale bars, (wing discs) 50 μm and (adult wings) 500 μm, respectively. ( | [
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PMC11770746 | Afterward, on days 7–10, animals from each group were anesthetized using isoflurane and decapitated. | [
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PMC9429973 | These 18 samples were examined by NGS, and 2 out of 18 showed an intron deletion, which, presumably, does not affect the function of the protein, but leads to the appearance of an additional peak on FA. | [
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PMC8735881 | Interestingly, the connection order of two inhibitors and the linker length between them appeared to have no significant influence on the antiviral function of the CMI constructs. | [
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PMC11078693 | Timing: 30 min Prepare 1 M Tris pH 8.0 solution. | [
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PMC11772449 | n= 3, *P<0.05). ** | [
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PMC9429973 | Summary/Conclusion: Together, our results suggest that AML cells benefit from MRC2 expression due to its multiple functions involving migration, invasion and the interaction with extracellular matrix components. | [
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PMC8316344 | Indeed, TRIB2 knockout prolonged while TRIB2 overexperssion shortened the half-life of TFRC protein in Bel-7404 and SK-Hep1 cells (Fig. 5C), indicating that TRIB2 declines TFRC expression via reducing its protein stability. | [
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PMC11345828 | E. Average body weight for each dosing cohort: control (gray), 26 dosed at 60 mg/kg q7d (orange), docetaxel dosed at 10 mg/kg q7d (teal), and 26 dosed at 60 mg/kg q7d + docetaxel dosed at 10 mg/kg q7d (beige). | [
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PMC11754436 | The present results demonstrated that overexpression of DHRS4-AS1 could inhibit Bcl2 and promote the expression of Bax and caspase 3, indicating that DHRS4-AS1 could promote OS cell apoptosis. | [
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PMC8873393 | Surprisingly, we observed that the size of the TUCP (transcripts of uncertain coding potential, part of lncRNAs) is substantially greater than appreciated (Fig. 5A). | [
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"tags": [
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"O",
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PMC11543885 | Liquid chromatography (LC) settingsTime intervals (min)Gradient (percentage of buffer B)Flow rate (uL/min)02%0.2532%0.2565%0.256335%0.257099%0.257599%0.25782%0.258299%0.25882%0.25892%0.25103stopN/AAnalysis sequence for NLRP3 speck properties in ColumbusStepBuilding blockMethodInputOutput1Input imageFlat-field correction: basic Bright-field correction: yes Stack Processing: Individual plane Create Global Image: NoChannel: HOECHST 3334 Channel: Alexa 488Output image2Find nucleiMethod: B Common Threshold: 0.4 Area > 30 μm2 Splitting coefficient: 7.0 Individual threshold: 0.4 Contrast>0.1Channel: HOECHST 3334 ROI population: NonePopulation: Nuclei3Find cytoplasmMethod: A Individual threshold: 0.15Channel: Alexa 488 Nuclei: NucleiOutput population: Cytoplasm4Find spotsMethod: A Relative spot intensity >0.18 Splitting sensitivity: 0.910 Calculate spot propertiesChannel: Alexa 488 ROI population: Nuclei ROI region: CytoplasmOutput population: NLRP3 speck5Define resultsStandard output: spots number Formula output: spots number/nuclei numberN/ASpots number/cell Relative spot intensity Spot Area [px2] Roundness Liquid chromatography (LC) settings Analysis sequence for NLRP3 speck properties in Columbus Timing: 3 days Timing: 3 days This section describes the characterization of a stable HEK293 cell line expressing flag-NLRP3-APEX2. | [
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"O",
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PMC11367146 | The ESR1-gigantol docked complex showed 0–7 hydrogen bond, which is the lowest among all the complexes. | [
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"tags": [
"O",
"O",
"O",
"O",
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PMC11365983 | This is illustrated by the accumulation of Gli2 at the axonemal tip, which is essential to signal transduction. | [
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"tokens": [
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PMC11575040 | Kaplan–Meier survival analysis revealed that higher expression levels of LINC00094 were significantly associated with shorter OS in patients with melanoma (p = 0.027, Fig. 1I). | [
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"tags": [
"O",
"O",
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"O",
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PMC10093184 | The isolation of COS4288 cells was carried out in a similar manner, as recently described in . | [
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"O",
"O",
"O",
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"O",
"O",
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"O",
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PMC11777207 | In studies involving human blood samples and mice, males and females were randomly assigned to each treatment group. | [
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"O",
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"O",
"O",
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