PMCID string | Sentences string | ner list |
|---|---|---|
PMC3813807 | In conclusion, the present study established the important role played by miR-373 in gastric cancer. | [
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PMC11574271 | Moreover, Inhibition of MMP12 expression appeared to attenuate the RON-induced bladder cancer cell migration and invasiveness (Fig. S1). | [
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PMC11632064 | Cells were plated in poly-D-lysine-coated microplates at a density of 45,000 cells/well (A-375), 60,000 cells/well (SK-MEL-5), 70,000 cells/well (MeWo), 60,000 cells/well (WM983B), 65,000 cells/well (IGR-1), 65,000 cells/well (COLO 829), and 70,000 cells/well (MeWo-Rho-0) in 100 μl of assay medium. | [
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PMC11200978 | The results of three separate experiments were combined and analyzed using Microsoft Excel 365 (v2404). | [
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PMC11765243 | No significant differences were observed in the secretion of other relevant cytokines like IL-4, IL-10, or IL-17A upon activation with KLH antigen (Figure 9B). | [
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PMC7039683 | Correlation of three biological replicates of E14.5 mouse palate epithelium and mesenchyme ATAC-seq results. ( | [
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PMC11357960 | Although the steady-state level of SUMOylation played an essential role in the homeostasis and function of lymphocytes, the relationship between dysregulated SUMOylation in lymphocytes and the resistance to anti-PD-1 immunotherapy in lung cancer was still unclear (45–48). | [
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PMC11087766 | This mutant showed a ~sixfold reduction in the number of nuclei with the chimera accumulated on the nuclear periphery (SI Appendix, Fig. S10). | [
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PMC11224020 | NF-κB (P65) is in gray, and the nuclei are in red; scale bar, 10 µm. | [
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PMC11682172 | Subsequently, these samples were spun at maximum speed for 40 min at 4 °C. | [
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PMC11635087 | When the co-cultured cells were incubated for 2 and 4 days after the co-cultivation without passaging, the number of incorporated chloroplasts per cell decreased (Fig. 3D), likely because of the subcellular digestion of chloroplasts in CHO-K1 cells or the random distribution to daughter cells after CHO-K1 cells divided. | [
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PMC11740207 | SD may be activated to replenish lost SCs during injury or periods of rapid growth, while maintaining homeostasis often requires AD to prevent uncontrolled cell growth (Shahriyari and Komarova, 2013). | [
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PMC8875242 | Directly after surgery, the resected part of the human jejunum was placed in cold (4 °C) Krebs–Henseleit buffer oxygenated with carbogen gas . | [
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PMC10944868 | Molecular docking studies delve into the atomic-level interactions, revealing the profound affinity of compound 12E with tubulin (with the best gScore value). | [
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PMC11026382 | From this first PCR reaction, 1 µL was used in a second round of PCR (22 cycles of denaturation/anneal/elongation) with primers that added Illumina sequencing adaptors. | [
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PMC10529414 | This relationship provides an understanding of the role of the RUNX2 transcription factor in the lung tumor context and poses new questions about the functional role of the lncRNA TALAM1 in lung cancer that need to be answered. | [
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PMC11794588 | All research studies and methods were carried out per institutional, national, and international guidelines and legislations. | [
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PMC11593713 | Reactive oxygen species have the potential to be pro- or anti-carcinogenic depending on how they enhance angiogenesis, proliferation, invasiveness, angiogenesis, and metastasis while also suppressing apoptosis. | [
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PMC11731161 | The data are expressed as mean ± SD. * | [
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PMC11173119 | The cDNA was synthesized by reverse transcription of 1 μg RNA using M-MuLV reverse transcriptase (Biolabmix, Novosibirsk, Russia). | [
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PMC11240448 | These two directions are closely correlated, and either one can be selected as a direction of cell state transition . | [
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PMC10197932 | Hence, we have evaluated the expression of Mcl-1 after 30 min post-US treatment by western bot analysis. | [
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PMC11596967 | Mitochondria regulate apoptosis and play an essential role in ROS generation during oxidative phosphorylation. | [
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PMC9429973 | The mortality in this sample was 27% (n=7): 3 patients (12%) died due to acute aPTT and the remaining 4 from other causes (3 from an oncological disease and 1 from septic shock). | [
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PMC9503669 | Another recent study reported that concanamycin A rescued MHC-I to the surface primary cells expressing Nef . | [
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PMC11670954 | Conversely, BA decreased the increased expression of these proteins and partially reversed their subcellular localization. | [
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PMC7305184 | For more reliable results, different cancer and non-cancer cell should be used. | [
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PMC11569208 | Cells were lysed, miRNA was extracted at indicated timepoints, then probed for miR-30 and shRNA against ACP2 cassette expression. ( | [
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PMC10858941 | A-172 and U-251 MG cell lines were authenticated by short tandem repeat profiling (StabVida, Portugal) following purification of genomic DNA. | [
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PMC10237474 | Furthermore, Expi293F GnTIexpressed protein 11 showed a monodispersed peak whereas the peak was broader for CHO-K1-purified protein complex (Fig 7C and Table 1, peak width column). | [
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PMC11209164 | BALB/c mice were implanted with CT26.wt 3 × 10 colon cancer cells. | [
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PMC7022782 | Microscopic observations at a high resolution of epoxy resin embedded sections showed clearly that green cytoplasmic areas were present in Caco-2 cells treated with ICG-NPs1, while they could not be seen in untreated cells, in cells treated with unloaded NPs, and also in cell-cultured with ICG solution alone. | [
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PMC11594641 | Beforehand, the cells were starved for 24 h in serum-free RPMI 1640 medium. | [
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PMC11746942 | These findings confirm that S1PR3 signaling modulates both keratinocyte hyperproliferation and the inflammatory microenvironment characteristic of psoriatic lesions. | [
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PMC10411253 | P < 0.001 in the Student’s t-test of the relative AMH to actin, with wild type group normalized to “1”. ( | [
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PMC11673128 | Briefly, macrophages were collected after detachment with TrypLE Express (Life Technologies, Carlsbad, CA, USA) and gentle scraping and finally resuspended with serum-free IMDM. | [
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PMC9895440 | Peptides were purchased in >95% purity from EZ Biolabs. | [
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PMC11612508 | Figure 5D presented the SEM image of synthesized GO. | [
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PMC11644761 | The 2 formula was used to evaluate the relative quantification (RQ) of each sample of interest. | [
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PMC10993311 | However, the methylation results obtained in this study agree with published data on the methylome in obesity, for example an increased risk of type 2 diabetes mellitus due to the effect of methylation on adiposity. | [
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PMC10887351 | In humans, ADRB3 is found on chromosome 8, and it shares 51% and 46% of sequence homology with β1- and β2-AR amino-acid sequences, respectively . | [
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PMC11411131 | However, the GFP signal exhibited a high background because of the excitation light and autofluorescence. | [
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PMC11737091 | The findings revealed a significant correlation between DBF4 and several characteristics, such as stage and gender (Fig. 1F-H). | [
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PMC11705547 | Created with BioRender.com. | [
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PMC11591030 | Additionally, our study, using ML358, found that AOP can alleviate oxidative stress by activating the Nrf2/Keap1 signaling pathway under non-stress conditions. | [
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PMC11412721 | Luciferase assays of the candidate p53RE. | [
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PMC10452486 | The treatment of these cells with trypsin selectively removed surface B2m-free HCs but had no effect on B2m-associated HLA (Face-1) (p. 107, Lines 19–21, ). | [
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PMC11297139 | The fusion protein NUP98/HOXA9 in human hematological cancers has been shown to create transcriptional condensates that prompt the origination of chromatin loops and activate gene transcription. | [
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PMC9429973 | Smoking appeared associated with longer OS (6.6 vs 34.9%; p=0.026; HR 0.53), but this effect is lost after adjusting for age, as smoking was more common in YOUNG (65.7 vs 25.0%). | [
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PMC11252553 | treated with Taurine solvent, irradiated at 12 Gy, and set for 48 hours, Group IX. | [
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PMC9429973 | Aims: to present a clinical case of high-risk thrombophilia combined with primary myelofibrosis. | [
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PMC6461034 | Data information: See the legend of Fig 2 for basic explanation. | [
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PMC10932641 | The TME of RCC is a highly structured ecosystem, composed of various components including immune cells, non-immune cells, extracellular matrix (ECM), and signaling molecules. | [
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PMC11360263 | While oncomodulation might explain some of HCMV’s tumor-promoting effects, it does not fully account for the virus’s overall impact on the tumor and its surrounding microenvironment . | [
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PMC9429973 | Summary/Conclusion: UCART22 after FCA LD was well tolerated and associated with improved host lymphocyte suppression and UCART22 expansion. | [
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PMC11656380 | NICD forms a quaternary complex with DNA via the transcription factor CSL and the coactivator MAML, leading the transcription of NOTCH-dependent genes. | [
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PMC11742047 | Not only lipid classes were reported but also, for the first time, molecular species with high annotation confidence. | [
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PMC7602170 | Platelet-derived growth factor receptor-α gene (PDGFRA) is mutated in probably 5–8% of GISTs (Table 2), which encodes a type III RTK with PDGFA as its ligand . | [
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PMC11545737 | The impact of RIP1 in Yersinia infection was investigated in fetal liver-derived macrophages (FLDMs) since RIP1 ablation is lethal to mice and BMDMs cannot be generated. | [
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PMC10958426 | The DEGs sets were set at fold change >1.5 and fold change >1.8, respectively. ( | [
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PMC11534035 | Again mirroring the findings of Loris et al., the claim that GPER1 and its downstream elements play a critical role in invasion of VC in vitro, is significantly strengthened (14). | [
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PMC11773391 | ERK inhibitor increases TMZ‐induced DNA damage in melanoma. ( | [
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PMC11747467 | The combination of ART and RC48 blocks tumor growth in the xenograft model of nude mice. ( | [
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PMC11792090 | This DNA fragment was codon-optimized using the GenSmart online tool, and synthesized by Anhui General Biotechnology Co., Ltd. (Anhui, China). | [
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PMC11528603 | S. affinis (local name: “chùm đuông”) fruits were collected from Tay Ninh province, Vietnam. | [
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PMC11534035 | They found a dose-dependent increase in cell viability at low doses of G1 (23). | [
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PMC11763126 | Current TRP modulators typically act directly on the channel protein , whereas CBDP1 regulates TRPM3 activity by suppressing its mRNA expression, providing a promising new approach for TRP modulation. | [
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PMC10366908 | Alexa-Fluor-488-conjugated anti-rat IgG was purchased from Cell Signaling Technology, Inc. (Danvers, MA, USA). | [
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PMC11714165 | Mice with similar tumor sizes according to IVIS were divided into five groups: PBS, NBD, NBD‐F, D‐NBD‐F, and DN‐F, respectively. | [
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PMC11258145 | The mixtures were vortexed for 1 min and lysed by sonication for 5 min. | [
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PMC11650848 | These included big band (1–48 Hz), theta (4–8 Hz), mu (8–12 Hz), beta (13–30 Hz), low gamma (30–48 Hz) and high gamma (49–70 Hz). | [
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PMC11300085 | Consistently, the results of transwell also indicated the enhanced invasion of SK-OV-3 cells after chemerin treatment at different doses (Figure 2(c)). | [
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PMC9014716 | However, animal experiments are needed to elucidate the detailed mechanisms. | [
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PMC10788478 | LGR6 expression and clinicopathological parameters in patients with lung cancer. | [
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PMC11672617 | The other compounds described above, including ionic compounds, have a milder and more prolonged effect, resulting in the survival of the majority of cells after 12 h of incubation. | [
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PMC11739696 | However, excessive Bcl-2 gene expression can upset cellular homeostasis, leading to dysregulated apoptosis. | [
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PMC11612794 | The chromosome alignment was analyzed according to a previous report. | [
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PMC11594806 | ADO demonstrated moderate cytotoxicity and induced apoptosis in a concentration-dependent manner, as evidenced by increased sub-G1 levels and cleaved PARP, thereby promoting apoptosis. | [
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]
}
] |
PMC11122631 | The reverse-phase HPLC (phenyl hexyl column) separation of fraction C5C (24.0 mg) eluting with 75% methanol produced compound 11 (5.4 mg). | [
{
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}
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PMC11672881 | Considering their diverse anti-cancer mechanisms, we hypothesized that co-administering TQ and CU could synergistically modulate multiple cancer-related signaling pathways, thereby enhancing effectiveness against melanoma. | [
{
"tags": [
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"O",
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}
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PMC11107915 | All of the cases were multiple-choice questions (MCQs) with four options. | [
{
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"O",
"O",
"O",
"O",
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PMC6600253 | There are several different components of telomerase, including the catalytic subunit telomerase reverse transcriptase (hTERT), the RNA component hTR, and associated proteins. | [
{
"tags": [
"O",
"O",
"O",
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}
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PMC11407042 | Do not incubate overnight, as cell proliferation may lead to inaccurate results. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"tokens": [
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"as",
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"may",
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]
}
] |
PMC9429973 | Descriptive statistics were used for baseline characteristics, Kaplan Meier methods for survival analysis, regression models for univariate/multivariate analysis and linear mixed models for HR-QoL over time. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"."
]
}
] |
PMC11106977 | Under normal conditions, a fraction (2–3%) of the glucose entering the cell is directed to the HBP . | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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]
}
] |
PMC10823017 | In the Caki-1 cells, the decrease is more pronounced (85%); in the 786-0 cells, there is an almost 37% reduction of the c-Myc level. | [
{
"tags": [
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"I-CellLine",
"I-CellLine",
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"37",
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"of",
"the",
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"level",
"."
]
}
] |
PMC9621239 | An online tool was used to analyse the mutations at the protein level (https://www.hiv.lanl.gov/content/sequence/ENTROPY/entropy.html). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"https://www.hiv.lanl.gov/content/sequence/ENTROPY/entropy.html",
")",
"."
]
}
] |
PMC9429973 | WGOM identified recurrent somatic structural aberrations occurring in at least three BCP-ALL cases, including focal deletions affecting ETV6 (9/31), PAX5 (5/31), ARPP21 (3/31), CD200/BTLA (3/31) and RAG2 (3/31). | [
{
"tags": [
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"3/31",
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"and",
"RAG2",
"(",
"3/31",
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]
}
] |
PMC7802142 | Blue indicates nuclei. | [
{
"tags": [
"O",
"O",
"O",
"O"
],
"tokens": [
"Blue",
"indicates",
"nuclei",
"."
]
}
] |
PMC10411253 | Sanger sequencing on the proband and his parents. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Sanger",
"sequencing",
"on",
"the",
"proband",
"and",
"his",
"parents",
"."
]
}
] |
PMC6742971 | A second limitation of our study lies in the fact that using T cell clones is a reductionist approach. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
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"clones",
"is",
"a",
"reductionist",
"approach",
"."
]
}
] |
PMC4685411 | The model cell line CHO-XM-111(CCOS-837)was cultivated in two steps with different chemically defined growth media (ChoMaster®HP-1&HP-5;Cell Culture Technologies,Switzerland) according to the DECHEMA guideline for the evaluation of single use bag materials. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
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"the",
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"of",
"single",
"use",
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"."
]
}
] |
PMC11525028 | Osteosarcoma cells were transfected with the reporter plasmids. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Osteosarcoma",
"cells",
"were",
"transfected",
"with",
"the",
"reporter",
"plasmids",
"."
]
}
] |
PMC10940855 | On the basis of the transcriptomic profiles of multiple myeloma cells treated with shRNA-EFNB2 compared with multiple myeloma cells treated with sh-Control, RNA-seq Upstream Regulator IPA predicted various regulators that could be responsible for the transcriptomic differences, including E2F4, IFNG, CCND1, STAT1, E2F1, STAT3, CDKN1a, and STAT5a (Fig. 4B). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
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"O",
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",",
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"STAT5a",
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"Fig.",
"4B",
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"."
]
}
] |
PMC10291556 | These densities lead to similar cell counts of both cell lines at the time of treatment, approximately 24 h after seeding. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"h",
"after",
"seeding",
"."
]
}
] |
PMC9080589 | Furthermore, the results of western blot analysis indicated that overexpression of PCDH8 significantly up-regulated the expression of LC3BI and LC3BII, as well as down-regulated p62 expression in TPC-1 cells, as compared with the vector group (Fig. 4G). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"Fig.",
"4",
"G",
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"."
]
}
] |
PMC8751435 | Fluorescence images in A549 cells treated with CME in the different concentration from 100 to 400 μg/ml for 24 h. Cells were stained with Hoechst 33258 (blue) to highlight the nuclei. ( | [
{
"tags": [
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
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"O",
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]
}
] |
PMC8735881 | Similar to the results of GPI-scFvs above, the CMI constructs were also integrated into the plasma membrane lipid rafts via the DAF-derived GPI anchor, as judged by colocalization of Alexa488-Anti-His and Alexa555-CtxB with confocal microscopy (Fig. S5). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"microscopy",
"(",
"Fig.",
"S5",
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"."
]
}
] |
PMC5925824 | 2Identification of LY3300054 epitope residues in human PD-L1. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"2Identification",
"of",
"LY3300054",
"epitope",
"residues",
"in",
"human",
"PD-L1",
"."
]
}
] |
PMC11726183 | For both cell lines, the IC50 values, percent inhibition, and viability of compounds 5–25 are displayed in Table 2. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"are",
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"in",
"Table",
"2",
"."
]
}
] |
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