PMCID string | Sentences string | ner list |
|---|---|---|
PMC11594641 | Firstly, FBS was filtered using a 0.22 μM pore filter membrane to dispose of larger vesicles before adding it to the culture medium. | [
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PMC7642379 | As suspension cell lines are cultivated under serum free conditions, the increased expression of genes associated with for instance cholesterol in suspension cell lines may be a result of a lower cholesterol content in the medium. | [
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PMC8996378 | The results showed that its activity against MDR was lower than that of verapamil (FAR = 0.63 at 10 μM), which was inactive (Gao and Aisa, 2017). | [
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PMC11711127 | For example, IL-10 produced during chronic infections promotes exhaustion, and simultaneous blockade of IL-10 and PD-1 improves reversion of exhaustion (68). | [
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PMC10667689 | FITC mouse IgG1 κ isotype antibody (clone: MOPC-21; BioLegend, USA) was used to guarantee the specificity of the flow cytometric results. | [
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PMC10878518 | A,B) The CAR expression on the surface of bone and soft-tissue sarcoma cells and fibroblasts was analyzed by flow cytometric analysis. | [
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PMC11763126 | Additionally, we found that CBDP1 exerts its antitumor effects by regulating the USP5/YTHDF2/TRPM3 axis. | [
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PMC5673060 | Peptides were ionised by electrospray ionisation using 1.8 kV applied immediately pre-column via a microtee built into the nanospray source. | [
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PMC5308810 | Immunoreactivity was detected using an ECL detection system (GE Healthcare Bio-Sciences Corp., Pittsburgh, PA). | [
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PMC11463018 | In particularly, a higher degree of distinction between these triazolopyridines and approved SAHA against MDA-MB-231 cell line was observed, indicating their potential cellular potency against solid tumour cells. | [
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PMC11206502 | When baseline and stressed OCR and ECAR values were independently compared, significantly higher values (p < 0.05; Kruskal–Wallis test) were found for the negative control, and lower HB concentrations (0.05 and 0.1 mg/mL) were found compared to the positive control and higher HB concentrations (0.2 and 0.4 mg/mL) (Figu... | [
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PMC11025866 | Reverse transcription-quantitative polymerase chain reaction (RT-qPCR) was used to measure viral lytic and cellular gene expression. | [
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PMC9856122 | Moreover, further cytotoxic assays were carried out using tumor cell lines to determine anti-HSV activity. | [
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PMC9509578 | Clonal and subclonal mutations are mainly responsible for the heterogeneity of tumors. | [
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PMC11471157 | Sayuri Morito: Investigation. | [
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PMC7351993 | The DA node array is composed of six pairs of a 4-ch digitizer (AD9287-100EBZ, Analog Devices) and an FPGA board (SP601, Xilinx) with a 1-Gbps Ethernet port. | [
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PMC9352806 | For lipidomics, worms (∼10000 worms each duplicate, 6 replicates per group) were transferred from NGM and washed five times with M9 buffer to collect worm pellets. | [
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PMC8193046 | Each well of a flat-bottom clear 96 well plate was complemented with 20 µL of either of the compounds 16–25 (100 µM), 160 µL of ABCG2-overexpressing MDCK II BCRP cells (45,000 cells/well), as well as 20 µL of a pheophorbide A solution (5 µM), subsequently incubating the plate at 37 °C in a 5% CO2-humidified atmosphere ... | [
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PMC6442998 | Proportion of GIST samples exhibiting nuclear (48 cases) or diffuse (20 cases) YAP-ir. | [
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PMC10944868 | MSAs and MDAs exhibit contrasting effects on MT polymer mass at high concentrations, inducing depolymerization or stabilization. | [
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PMC11740207 | Investigating the differences between healthy and leukemic or cancerous VSELSCs, such as VSLSLCs and VSCSLCs, can reveal molecular and epigenetic mechanisms responsible for leukemia and cancer transformation. | [
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PMC9429973 | Methods: Forty-four patients were diagnosed with PRES out of 641 patients who underwent hematopoietic stem cell transplantation in Göztepe Medical Park Hospital Pediatric Bone Marrow Transplantation Unit, between April 2014 and November 2020, were evaluated retrospectively. | [
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PMC8336407 | Treatment of the cells with different concentrations of extract revealed that the extract increases the antioxidant capacity in a dose-dependent manner in which treatment of the cells with 1.5, 2.0, and 2.5 mg/mL concentrations of extract increased this parameter to 1814 ± 64.85, 2498 ± 37.83, and 3952 ± 37.83 µM (p va... | [
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PMC11592837 | Quantities of short and long fragments of nuclear (Alu) and mitochondrial (MTCO3) cfDNA were determined by quantitative real-time PCR (qPCR) on a Light-cycler 96 (Roche, Mannheim, Germany) using 2 µL of cell-free medium from the respective sample as a template. | [
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PMC11266100 | The conventional electroporation solution, characterized by a sucrose-based composition (buffer No. 1), yields outcomes akin to buffers No. Two and seven when subjected to a voltage of 1.2 kV/cm or to nanosecond protocols. | [
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PMC10317042 | Thus, vorinostat acts as an active agent in CCS cells. | [
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PMC11640247 | Notably, the defective phenotypes caused by the p.E62del, p.D63N, and p.Y64C variants, but not by p.Q61L, were rescued by DN-PAK1, reflecting the rescue observed in cortical neuron migration . | [
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PMC7189327 | Interestingly, we found that the genes in submodule 1 were all upregulated. | [
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PMC11715644 | Through custom cell segmentation tools, we visualized individual cells within migrating monolayers by color-coding for their AR (Fig. 5B), SI (Fig. 5C), and combined AR and SI traits (Fig. 5D). | [
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PMC9684669 | Specifically, CAMK2D is highly up-regulated, and CAMK2B is down-regulated ( Figure 5A ). | [
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PMC11568601 | Furthermore, knocking down IRE1 with si-IRE1 or inhibiting of ER stress with 4-PBA suppressed the expression of ATF6, BiP, XBP1s and CHOP induced by TGT, as well as the expression of cleaved caspase-3 and cleaved PARP1. | [
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PMC6889484 | Supernatants were harvested every 2 to 3 days for up to 42 days and monitored by ELISA for p24 CA expression. | [
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PMC11799620 | The BHT was used as a standard. | [
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PMC11791203 | In addition, the impact of petroleum ether extract on the HT29 cell line was evaluated. | [
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PMC9429973 | However, individual approach must be applied in the selection of antineoplastic treatment and its timing, and in evaluating the risks of coronavirus infection reactivation during immunosuppressive therapy. | [
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PMC10887351 | The cardioprotective potential of β3-AR against HF was determined first from the KO-mice phenotype that lacks the receptor . | [
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PMC9454852 | Alternatively, DHR 123 fluorescence was registered by using confocal microscopy with the same setting described above for the measurement of free cytosolic Ca concentration. | [
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PMC11462673 | Through H3K27ac CUT&Tag experiments, a significant reduction in H3K27ac enrichment was observed in this enhancer region after LDB1 knockdown (Fig. 6A). | [
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PMC11394227 | In this experiment, puromycin and tunicamycin were employed to induce cell apoptosis, and the apoptosis rate was quantified by flow cytometry. | [
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PMC11766350 | Results were obtained using a Biotek Synergy H1 plate reader at 450 and 650 nm wavelengths (Agilent, Santa Clara, CA, USA). | [
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PMC11627060 | To assess the dose-dependent effects, TQ, TQ-BSA NPs, and cisplatin were evaluated at concentrations ranging from 3.125 to 100 μg/mL. The effectiveness of the samples was assessed by incubating 96-well plates at 36°C with 5% CO2, followed by examination after 24 h . | [
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PMC11279598 | A control non-malignant human mammary epithelial cell line (HMEC) was obtained from commercial sources (Invitrogen/ThermoFisher Scientific, Carlsbad, CA, USA) and maintained in vitro as per the supplier’s recommendation . | [
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PMC11791203 | Examination of the chloroform extract from H. malabarica unveiled four compounds with negative logKp and lower logS values. | [
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PMC6442998 | The human GIST48 cell line was kindly provided by Dr. Ronald DeMatteo, Perelman School of Medicine, Philadelphia, PA, USA. | [
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PMC9429973 | Pts with <5% leukemic blasts after induction cycle 1 will proceed to the first cycle of consolidation; pts with ≥5% residual blasts will undergo a second induction cycle. | [
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PMC11474209 | Among all, the most common and harmful type of cyanobacterial toxins is MCs, often found in freshwater, estuaries, and coastal environments. | [
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PMC7348793 | The second is that the PCR product containing the correct number of repeats is by far the most predominant one, and that no discrete products with an increased number of repeats were observed, regardless of the DNA polymerase used for amplification. | [
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PMC11467964 | We further generated scoring system consisting of clinical features and risk scores. | [
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PMC11532793 | Experiments were re-quantified with Salmon and Gibbs sampling to generate 100 Gibbs resamples per library. | [
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PMC9436459 | 0.5 μg/mL (5-FU)BGC-823n.a. | [
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PMC5035325 | The intensity of EGFR expression in 13 (44 %) of 30 animals is strong while the most animals 14 (47 %) shown a weak reactivity to NeuGcGM3 ganglioside. | [
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PMC4839679 | Of particular novelty is the identification of cell adhesion as a major downstream process uniquely regulated by PBRM1 expression. | [
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PMC11587606 | The confocal images of DAPI-stained equatorial cross sections of MCF-10 A/RH acini with CRT0066854; scale bar 20 μm (n = 3). ( | [
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PMC11085211 | In line with these observations, Annexin-V/7-AAD staining confirmed that imatinib promoted a slight increase (23.4% vs. 15.6%; p < 0.05) in early apoptotic cells compared to the control at 48 h (Figure 6b,c). | [
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PMC9429973 | For the diagnosis of ITP, a bone marrow (BM) study may be useful to differentiate between ITP and other diseases, such as myelodysplastic syndromes (MDS). | [
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PMC11530949 | After that, the sediment was continuously washed with ethanol and distilled water (50/50 V/V) and allowed to dry overnight at 120 °C in a vacuum oven (33). | [
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PMC11411004 | One-way analysis of variance (ANOVA) was used for statistical analysis. **** | [
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PMC9596868 | Values represent mean ± SD of two independent experiments analysed by two tailed paired student's t test (**p ≤ 0.01; ****p ≤ 0.0001). ( | [
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PMC8097906 | Cell viability measurement via MTS-assay after treatment with VSM extract (1, 10, 25, 50 and 100 μg/ml) of the primary non-tumorigenic control cells: a human mesenchymal stem cells (hMSCs) and b human fibroblasts (NHDF), as well as of the RMA cell line: c HA-OH1. | [
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PMC9429973 | Of the four eIF2a-kinases in the human genome we determined that HRI (EIF2AK1) was uniquely required for BTM-3566 eIF2a phosphorylation, activation of the ATF4-ISR and induction of apoptosis. | [
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PMC11803918 | Notably, this approach preserved the antitumor functions of γδ-T exosomes while achieving a high encapsulation efficiency of drug molecules. | [
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PMC11143482 | For body weighing, all mice were removed from the cage by cup handling and placed within a plastic container on an animal digital weighing scale (ACS-ZC41/ZE41 Camry, Hong Kong). | [
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PMC11190538 | C-phycocyanin also protects the liver by preventing hepatic lipid peroxidation, functioning as an antioxidant . | [
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PMC11678448 | The pathogens responsible for caprine pasteurellosis are P. multocida and M. haemolytica, with P. multocida being the primary causative agent . | [
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PMC9429973 | Regarding PFS, the only independent variables were response to induction-therapy CR vs PR (HR 0.084; CI 0.038-0.187; p<0.001) and RTX maintenance (HR 0.251; CI 0.110-0.577; p=0.001). | [
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PMC9429973 | Patients who do not achieve a complete remission (CR) after cycle 8 can receive an additional 6 monthly doses of obinotuzumab during cycles 9 -14. | [
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PMC11551844 | Afterwards, a mixture of ethyl acetate and methanol (polar solvent) in various rations was used. | [
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PMC9429973 | Methods: An electronic database search of 1056 patients with confirmed diagnosis of CLL who presented at St Paul’s Hospital, Vancouver, Canada over 30 years and between 1991 and 2021 was performed with 520 having a complete data set. | [
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PMC5363531 | The time required for the scrape to heal, in each cell line, was also recorded. | [
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PMC8584319 | AZD8055 inhibits 4E-BP1 phosphorylation and induces ERK1/2 and p38 phosphorylation, which are independent of each other. | [
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PMC9454852 | The fluorescence change was assessed using a plate reader (ex 485 nm/em 535 nm). | [
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PMC8864075 | As above, we found that reTFAE inhibited the PI3K/Akt pathway and TWIST, yet how reTFAE led to the decline of EMT is not clear. | [
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PMC8009078 | Mean RoG of TMPRSS2 bound with proposed molecules (A1–A5) was seen to be less than 25 Å. The RMSD and RMSF profile of the TMPRSS2 inhibitors in our previous publication were also corroborated with the current findings. | [
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PMC6312945 | All the samples were repeated in triplicate, and the results were analyzed by using the 2 method. | [
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PMC10747160 | Although the Mono-Grft that we produced appeared to be well-folded on NMR, the sample was only able to be resuspended into pH 2.5 buffer, and it aggregated over the course of an hour at pH 6.5–7.0 (Figure S1A,B). | [
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PMC7570809 | AKT is an important effector of cell survival whose phosphorylation determines the activation of PI3K pathway triggered by integrin signaling . | [
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PMC7961460 | Among these there are inhibitor of differentiation proteins , growth factors with paracrine signalling to re-program surrounding fibroblasts , chemokines and tumour-specific antigens that contributes to recruit and transform immune cells to sustain tumour survival . | [
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PMC11495567 | Mutated KRAS is the most common driver gene in lung adenocarcinoma, the most common histological subtype of lung cancer, in White and Black Americans alike . | [
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PMC11765988 | Hypothetically, the increased oxidative stress seen in sarcoidosis might affect, when out-of-proportion cell metabolism and predispose to carcinogenesis. | [
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PMC11209164 | The 786-0 cells were plated to confluency in 12-well plates and incubated overnight at 37 °C in a 5% CO2 humidified incubator. | [
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PMC11696659 | In this study investigating the use of highly accurate and sensitive techniques for the analysis of telomeres, we found that patients in the cancer cohort had a higher proportion of short telomeres compared to the control cohort, suggesting that technology could be considered a useful diagnostic tool during early scree... | [
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PMC11064533 | The proteins differentially expressed between adhered and planktonic bacterial cells were identified using the label-free quantification algorithm provided by MaxQuant (LFQ) (39) and further analyzed with the limma R package. | [
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PMC11694066 | Mean ± SD; n = 3. | [
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PMC9429973 | Image: Summary/Conclusion: The combination of EZH2 inhibitor DZNeP and BCL2 inhibitor Venetoclax exhibited a strong synergistic cell proliferation arrest and apoptosis of AML cells in PIK3IP1 dependent manner. | [
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PMC10178190 | Therefore, it is not surprising that HS-5-derived CM did not confer chemoresistance to all OC cell lines tested, while CM derived from the tumor-activated HS-5 promoted platinum RJY13 resistance in all of the OC cell lines tested. | [
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PMC9429973 | Patients aged 18 years or above with morphologically documented RR-AML, ECOG performance status 0-2 and adequate organ function were eligible. | [
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PMC11731614 | The predicted protein targets for let-7 and miR-23 were obtained by cross-referencing 3 separate databases: MirDB, TargetScan, and DIANA-microT. The protein targets predicted by all three programs were used for downstream analysis. | [
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11449273 | H1299- p53 and H1299-PG-p53 were run on the same gel separated by a lane. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"H1299-",
"p53",
"and",
"H1299-PG-p53",
"were",
"run",
"on",
"the... |
PMC11087055 | Axes are shown. | [
{
"tags": [
"O",
"O",
"O",
"O"
],
"tokens": [
"Axes",
"are",
"shown",
"."
]
}
] |
PMC11733919 | b–f) Senescence program was induced in normal and cancer cells by hydrogen peroxide (SIPS) and etoposide (TIS) stimulation, respectively. ( | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9429973 | R were defined as patients with duration of response (DoR) ≥3 months after bone marrow (BM) complete remission (CR) achievement. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
... |
PMC11360263 | HCMV infection of OECs with these high-risk HCMV strains created a pro-oncogenic environment, leading to sustained growth of CMV-transformed OECs and the formation of colonies in soft agar. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11347429 | Visualization and analyses of PLINK and GenomeStudio output files were performed using the R software package (50). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Visualization",
"and",
"analyses",
... |
PMC10812665 | However, the downstream response of the cells can be very complex, in that only subsets of the target genes are affected. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"However... |
PMC5839394 | Briefly cells were fixed in 70% ethanol, washed in PBS and resuspended in DNA extraction buffer (200 mM Na2HPO4, 0.1% Triton X-100). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11243198 | GANT61 was purchased from TOCRIS (Minneapolis, MN, USA). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"GANT61",
"was",
"purchased",
"from",
"TOCRIS",
"(",
"Minneapolis",
",",
"MN",
... |
PMC11674441 | Because there was a marked increase in lymphocyte response to several HLA class II-restricted neoantigens, we speculate that strong antitumor immune effect may have occurred and induced antigen spreading in these two cases. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC10877303 | MERS-CoV's genome consists of ORF1a and ORF1b, which produce two large polyproteins. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"MERS-CoV",
"'s",
"genome",
"consists",
"of",
"ORF1a",
"and",
"OR... |
PMC7053076 | In the classical NF-κB pathway, various cellular receptors, such as tumor necrosis factor receptors (TNFRs), are activated. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"In",
"the",
... |
PMC11200978 | These findings contribute to the ongoing efforts to improve treatment options for NSCLC, offering a promising approach that warrants further investigation in preclinical and clinical settings. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
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