PMCID string | Sentences string | ner list |
|---|---|---|
PMC11802929 | We also defined phenotype scores as: Cytotoxic score (GZMB, GZMA, GNLY, PRF1) and Naïve-Memory score (TCF7, CCR7, SELL, LEF1, GZMK, IL7R). | [
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PMC8557138 | For example, Michael et al., implanted fragments of Brown-Pearce epithelioma and V2 carcinoma into rabbit corneal stroma and demonstrated the process of neovascularization in an avascular site (Gimbrone Jr. et al. 1974). | [
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PMC7348793 | It is conceivable that the co-amplification of the nuclear mitochondrial sequences (NUMTs) containing an alternative number of repeats can manifest itself as mtDNA length heteroplasmy. | [
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PMC9504875 | A similar pattern was reported in the 3B protein of foot-and-mouth disease virus, although this protein does not bind to TRIM25 but rather directly binds to RIG-I . | [
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PMC11519788 | Student's t test was used to compare the differences between two groups. | [
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PMC11538390 | b Correlation between the regional allele frequency of rs570516915 and prevalence of CP. | [
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PMC10723784 | The IC50 values have been summarized in Table 4. | [
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PMC11694066 | This plating density was optimized to ensure that the cells were in growth phase by the end of the 5-day treatment. | [
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PMC10380508 | The GEPIA website (available at http://gepia.cancer-pku.cn/, accessed on 20 December 2022) is an online resource to analyze clinical data from TCGA database and tissue-specific expression patterns . | [
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PMC11185260 | Human ATRT cell line CHLA-06 and human rhabdomyosarcoma cell lines A-204 and Hs729 were obtained from the American Type Culture Collection (Manassas, VA, USA). | [
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PMC11770130 | The pair-fed Ntsr2 AKO mice also had a better performance in the GTT (Fig. 2c) and ITT (Fig. 2d). | [
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PMC11615218 | Upon antigenic stimulation, CD4 T cells undergo proliferation and secretion of cytokines that stimulate antibody responses or lead to macrophage activation via interactions with class II MHC molecules, whereas CD8 T cells kill the antigen-bearing cells through class I MHC molecules . | [
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PMC4839679 | Therefore, ccRCC patients without mutated PBRM1 may have alterations in different genes that affect the same pathways, making the mutational status of PBRM1 irrelevant. | [
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PMC11742670 | Combination of DL with FRS theory, XAI, and medicinal chemistry to identify potential new drug candidates by analyzing the experimental results of Vidarabine natural product. | [
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PMC9429973 | Aims: Here we will investigate the dynamics of stress responses in the hematopoietic stem and progenitor compartment at the single-cell level, independent of the use of defined surface markers. | [
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PMC5311252 | Clinical studies have shown us that this type of targeted therapy is only efficient against tumors that rely on the targeted protein for proliferation. | [
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PMC11066331 | The model's maximum Q2Y value indicates the number of components at which overfitting begins. | [
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PMC7039683 | Browser view of the human genome, hg19, focused on this locus. | [
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PMC10698968 | Additionally, the presence of abundant and large rough endoplasmic reticulum, multivesicular bodies, autophagic vacuoles (av), and numerous endosomes and vesicles (v) are further signals of great endocytotic and exocytotic activities, which indicate high cell-to-cell communication (Fig. 4C, picture B). | [
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PMC11680391 | Ideally, the dairy farmer and herd veterinarian relationship is built on mutual trust and an alignment of expectations; therefore, we hypothesize that the agreement would be at least minor to moderate, and the association with BTSCC will be minor. | [
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PMC11802929 | We graph the distribution of putative antigens against the SARS-CoV-2 genome and highlighted the 558 (58.7%) constructs that were expressed and used for the T cell capture experiment, and the 102 (18.3%) that captured at least 1 cell (Fig. 2a, Supplementary Fig. 2a). | [
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PMC11659921 | Analysis of risk score correlation with immune infiltration‐associated cells based on the xCELL method. | [
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PMC9429973 | Baseline characteristics include median age 75 years, median number of prior therapies 3, 97% received prior treatment with venetoclax, 97% had prior HMA, and 43% had prior induction failure. | [
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PMC4395774 | Based on our results showing that 10–20% WT hematopoietic chimerism is sufficient to reestablish normal immune regulation, we investigated the feasibility of HSC gene therapy for perforin deficiency. | [
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PMC11585994 | Experimental design utilizing the T-ALL patient-derived xenograft mouse model. | [
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PMC11545737 | This mechanism plays a role in the activation of the canonical pyroptosis pathway activation in THP-1 monocytes, since downregulation of cathepsin B downregulation reduces NLRP3 activation and IL-1β production by N. gonorrhoeae . | [
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PMC8922418 | More recently, a clinical report on the "London patient" with Hodgkin's lymphoma and AIDS provided similar evidence of curative treatment (Gupta et al., 2019). | [
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PMC6617630 | Co-treatment with I-BET and ABT-199 had a strong combinatorial effect with nearly complete abolition of cell survival not only in WT-MYC cell line but also DHL (DOHH2) and THL (Val) DLBCL cell lines (Fig. 8a–c). | [
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PMC11696576 | Cancers which rely on mitochondrial fatty acid oxidation (FAO) for energy derived from oxidative phosphorylation (OXPHOS) have a high oxidative burden. | [
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PMC10873328 | The cisplatin-resistant derivate ovarian cancer cell line A2780/CDDP was cultured in intermittent incremental exposure to cisplatin. | [
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PMC11694346 | Upon reaction of BT-DNBS with biothiols, the N–S bond between the piperazine and DNBS is cleaved, which interrupts the PET process, resulting in the restoration of fluorescence. | [
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PMC10440586 | Each column represents a sample in the TCGA dataset. | [
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PMC9684669 | To investigate the unique target of terfenadine in combinational chemotherapy for MDR cancer, the global gene expression of doxorubicin-sensitive and -resistant cell lines was profiled using RNA sequence. | [
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PMC11672881 | These genes are involved in various processes, such as cellular stress response, transcription regulation, and reduces cell migration . | [
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PMC8524093 | Released IFNs by infected cells exert an autocrine/paracrine signaling that will activate the Janus Kinase-signal transducer and activator of transcription (JAK-STAT) pathway, through binding to IFN-α/β receptors (IFNAR) (Majoros et al., 2017). | [
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PMC11707577 | As shown in Figure 8A, treated polyps did not present signs of damage, at any time of continuous incubation, suggesting the biosafety of the engineered compound in absence of photostimulation. | [
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PMC8469018 | As the obtained tests results did not show any involvement of mitochondria in the toxicity of teriflunomide, the localization of the compound in individual cell compartments was examined, using chromatographic methods. | [
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PMC10998613 | Taking into consideration the observation of CXCR4 homomultimerization and weak β2AR homodimerization, we conclude that the heteromeric clusters are composed of one β2AR and several CXCR4 receptors. | [
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PMC11306019 | To investigate this further, we explored whether repeated treatments to maintain concentration over time are sufficient for BTZ to exhibit its anticancer effect at this level. | [
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PMC11706776 | TPM transcripts per million. | [
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PMC11388384 | To test whether diffusive populations reflected known features of SHH biochemistry, we took inspiration from prior experiments, in which SHH lacking its C-terminal cholesterol was found to form longer signaling gradients compared to wild-type SHH, presumably by altering SHH interactions in the extracellular space (22). | [
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PMC9429973 | Aims: Here, we investigate whether BM Tfr2 targeting might represent a therapeutic option for TDT. | [
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PMC10957991 | Besides these physiological functions, TRPV4 seems to be important for the maintenance of epithelial integrity through its role in the regulation of on adherens and tight junction proteins. | [
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PMC9587866 | Therefore, in our study we adopted the safer insilico approach which uses medicinal compounds to target EYA3 to obtain good cytotoxic inhibitor for EWS. | [
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PMC11342785 | We found that TPPP variants with strong MT-association triggered the strongest MT bundling activity when targeted to DDX4-droplet hubs (e.g. C-CORE) (Figs. 3C, 6F, S2B, and S9, A–C). | [
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PMC10919056 | Transfection was performed using Lipofectamine 3000 (Invitrogen, Shanghai, China). | [
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PMC10729469 | After incubation, cells were centrifuged, resuspended in 4 mL 30% Percoll, layered with 4 mL HBSS, centrifuged (700xg for 10 min), and the cell pellet collected for flow staining. | [
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PMC10092581 | Apart from the aforementioned behavior of Au(I) complexes, both Au(I) and Ag(I) complexes did not show any signs of degradation/decomposition in all the measured timepoints. | [
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PMC9429973 | Transfusion dependence for 8 weeks was similar with 32.1% and 22.4% of the G group and 37.9% and 20.0% of the TC group being platelet transfusion or red blood cell transfusion independent, respectively. | [
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PMC11546117 | The ESI voltage was 4 kV for all analytes. | [
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PMC11727062 | To date, over 40 distinct ginsenosides have been identified (Xu et al. 2021). | [
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PMC11708541 | Nonetheless, a growing amount of data indicated that fampridine has offered benefits in addition to its symptomatic mechanism of action (Fig. 7). | [
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PMC11739504 | Fig. 5The acetyltransferase domain of Kat2b in the cytosol is significant for localization of IFT components at primary cilia. ( | [
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PMC10976516 | Zugazagoitia et al.; Yang et al.; Wang et al.SurgeryMost cases of SCLC cannot be treated with surgery. | [
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PMC11604768 | Consistent responses across the populations of barcodes suggested the induction of individual promoters following stimulation was highly reproducible. | [
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PMC9577200 | Moreover, we used the most efficient natural antibacterial material as an anticancer treatment. | [
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PMC10154097 | THE-2 and Huh7 cells were cultured in RMPI-1640, and BEL-7404, HCCLM3, and Hep3B were cultured in DMEM (Invitrogen, USA). | [
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PMC6181431 | Many variants were discarded due to misaligned reads, repetitive sequence tracts, low quality base or read scores, or reads seen in only a single direction. | [
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PMC7802142 | a Schematic illustration of ReN-NV preparation. | [
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PMC11593084 | PODO/TERT256 and hTCEpi were purchased from EVERCYTE (Vienna, Austria). | [
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PMC8316344 | Thereby, we tested whether TRIB2 regulates TFRC protein via PSMB5. | [
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PMC11572213 | Puromycin selection was applied for 3 days, and the medium was replaced. | [
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PMC10936243 | But I think in terms of management and cost, to wash it that often and to control with the bio-security, I think that will lead to higher cost” [D063].Participants reported using alternative forms of bedding such as disposable materials (e.g. newspapers). | [
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PMC5839394 | The emission-excitation (EEM) spectra of DNA were recorded by Luminescent Spectrometer (Perkin Elmer LS 55). | [
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PMC11394730 | Natural products also exhibit the ability to interfere with biosynthetic pathways critical for cancer cell survival. | [
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PMC9592219 | Finally, various binding modes were scored and sorted based on the molecular energy of docking, and the docking conformation of the molecule was determined based on the lowest docking energy. | [
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PMC10747160 | When we look solely at the raw spike ELISA signal, it appears as though the M, N, and MNE strains have higher spike incorporation per virion when compared to Wild-Type virus (Figure S8A,C). | [
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PMC11281366 | The resulting library was sequenced using a NovaSeq 6000 system (Illumina Technologies). | [
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PMC11656657 | Quantification of the specified cytokines, including CCL2, CCL3, CCL5, CCL7, CX3CL1, CXCL1, CXCL2, CXCL4, CXCL5, CXCL6, CXCL8 (IL8), CXCL13, CXCL14, G-CSF (CSF3), GM-CSF, IFN-gamma, IL10, IL13, IL1b, IL5, MCSF, and TNF-alpha, was normalized on blank control background for the in vitro data (in violet) and no tumor samp... | [
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PMC11055443 | In addition to the anti-apoptotic effect of IL-6, previous studies have also shown that the MSCs soluble factors can lead to a decrease in apoptosis by reducing the activation of caspase 3 and 7 (39). | [
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PMC8097906 | The bottom layer in each well of a 6-well plate (Sarstedt, Germany) was made with 1.5 ml of 1% agar (Sigma Aldrich, Saint Luis, USA) in assay medium and the top layer was made with 1.5 ml of 0.6% agar and 5000 cells in assay medium (i.e., 0.75 ml assay medium with 5000 cells and 0.75 ml 0.6% agarose solution). | [
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PMC11470381 | Imaging sessions should be kept brief to prevent photo-bleaching of fluorescent proteins. | [
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PMC11588085 | Bubble map of pathways enriched in patient samples with low XIST expression after GSEA. | [
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PMC8041314 | As a first step, 93 reports between 2004 and 2021 were collected in which the evaluation of small-molecule inhibitors of ABCB1, ABCC1, and ABCG2 was described. | [
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PMC11592837 | In drug-treated Jurkat cells, no substantial difference in the level of both Alu fragments was detected after 6 h, but then Alu fragments were observed at insignificantly higher levels compared to the control (Figure 5C,D). | [
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PMC11122631 | With the in silico tool InflamNat, the predicted probabilities of the positive controls (aminoguanidine and apigenin) with IC50 (inhibition for NO production) <50 μM in macrophages were in a similar range (0.621–0.657), but most of the predicted probabilities of compounds were below 0.385 (Table S16). | [
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PMC11743414 | Acute myeloid leukemia (AML) has a poor prognosis and high heterogeneity. | [
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PMC6892818 | RCC lines ACHN, 786-O and A-704, and normal HRPT cells were treated with mCD40L for the indicated time periods (1.5, 3 and 6 h) and expression of TRAF1 (a), TRAF2 (b) and TRAF3 (c) was detected by immunoblotting (40 µg protein/lane) in controls (‘C’) vs. mCD40L-treated cells (‘mL’). | [
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PMC4112127 | Approximately 60% of CCs are extrahepatic (ECC), arising from the region of the bifurcation of the right and left hepatic ducts extending distally to the distal common bile duct . | [
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PMC11750161 | The signal sequence region was removed from eel LH/CGR and the fragments were inserted under the VSVG-tag signal sequence of the mammalian expression vector. | [
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PMC11576293 | In addition, we investigated compounds with potential anticancer activities to see if they may act as dual inhibitors of EGFR and VEGFR-2 in order to get insight into their biological process. | [
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PMC11795610 | All experiments were performed independently at least triplicate and the results were expressed as the mean ± standard deviation (SD). | [
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PMC9429973 | After a median follow-up of 19 months (mo), 6 pts out of the 25 who reached CR/CRi (24%) relapsed and 20 out of 32 (63%) pts are alive. | [
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PMC11612315 | The IC50 values for the calcium response of GLP-1, liraglutide, exendin-4, and exendin 9–39 were 178.60, 62.19, 64.49, and 28.18 nM, respectively (Fig. 5f–h). | [
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PMC11534035 | Cells treated with 1 μM of G1 exhibited a non-significant reduction in size. | [
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PMC11694346 | The detailed information of materials, reagents, instruments, synthesis, spectroscopic analysis, cell culture, cytotoxicity assay, fluorescence imaging experiments are provided in the ESI.† BT-Boc (100 mg, 0.11 mmol) was dissolved in dichloromethane (3 mL) in a dried flask. | [
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PMC5417661 | A four-parameter logistic fit of the area under the curve data between 96 and 186 h time point gave pIC50 values of 8.3 and 8.7 for NOV202 and Combretastatin A4, respectively (Figure 4D). | [
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9621239 | Besides, the plasmid expressing MYC-Flag was also co-transfected with the plasmids expressing HBx-WT (pcHBx-WT), HBx-SM (pcHBx-SM), HBx-DM (pcHBx-DM) or HBx-TM (pc-HBx-TM) into Huh 7 cells for 48 h. After lysis, MYC-Flag was immunoprecipitated by the Pierce Classic Magnetic IP/Co-IP Kit using the antibody (#14793, CST,... | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC6163708 | HH has been described to promote oncogenesis in leukemias , bladder cancer , and prostate cancer . | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O"
],
"tokens": [
"HH",
"has",
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"described",
"to",
"promote",
... |
PMC11633763 | The results of Western blot analysis and quantitative reverse transcription polymerase chain reaction (qRT‐PCR) showed that the expression of USP22 in osteosarcoma tissues was significantly higher than that in adjacent healthy tissues. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11753949 | In both cases fixation was carried out for 20 min at room temperature. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"In",
"both",
"cases",
"fixation",
"was",
"carried",
"out",
"for",
"20... |
PMC9429973 | All five Rac1 inhibitors resulted in an overall antiproliferative effect, tested at dosage around IC80. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"All",
"five",
"Rac1",
"inhibitors",
"resulted",
"in",
... |
PMC11319300 | This is supported by data derived from orangutans, which are thought not to encode MYEOV due to a mutation leading to a premature stop codon (Papamichos et al., 2015), yet they still have an enhancer/promoter chromatin state present in the same region (Figure 4). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11774112 | The data in B are expressed as the means ± SDs (n= 6). ( | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"data",
"in",
"B",
"are",
"expressed",
"as... |
PMC11098378 | Such IEPs might be useful molecular tools in identifying the conserved host immunity factors they target. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Such",
"IEPs",
"might",
"be",
"useful",
"molecular",
... |
PMC9220170 | Therefore, to determine the effect of these selenium agents on the activity of mitochondrial reductases in living cells, which makes it possible to indirectly judge the change in their proliferative properties in the presence or absence of SELENOM-KD or SELENOT-KD, we performed an MTT analysis. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9351137 | To understand the relationships between Aurora B and the CRS under investigation, we asked whether the inhibition of its kinase activity affects the recruitment of both BAF53a and TIP60 to the midbody. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11787651 | The new Sciex ZenoTOF 7600, with an increased scan speed and increased sensitivity enabled by the Zeno trap, has allowed us to decrease the mass spectrometer (or analytical) run time to only 20 min. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11539788 | mTOR signalling is often activated by the upstream kinase AKT, resulting in the nuclear translocation of phosphorylated mTOR and ultimately activating downstream effectors such as S6K1 and 4EBP1 to regulate cell proliferation, survival, metabolism and autophagy . | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC8633974 | Half of the collected cells were spun down and seeded in new plate and maintained in the incubator. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Half",
"of",
"the",
"collected",
"cell... |
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