PMCID string | Sentences string | ner list |
|---|---|---|
PMC11622247 | Underlines mark 2′-OMe modifications. | [
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PMC11055323 | For the 3D Structure Reconstruction, Hi-C reads were remapped by BWA-MEM (Version 0.7.17) to the reference human genome (hg38) with default parameters. | [
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PMC9368503 | Assessment of the growth rate of ICR-SS-1 showed exponential growth with a population doubling time of 93 h (Figure 3C). | [
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PMC10969097 | The search was adapted to each database, using the following terms: (Mushrooms OR mushroom extracts OR medicinal mushrooms) AND (synergy OR combined effect OR synergistic interaction OR potentiation OR interaction) AND (chemotherapy OR chemotherapeutic agents OR cancer treatment) AND (chemoresistance OR treatment resis... | [
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PMC10170482 | P < 0.001 denotes significant differences with respect to the monolayer culture. ( | [
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PMC11240052 | a,b). | [
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PMC11224020 | merging results from upregulated and downregulated genes only as well as all regulated genes. | [
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PMC9592219 | The U6 served as the control for standardizing miRNA, and ATCB was used as the control to standardize mRNA (Table S1). | [
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PMC9429973 | The HIV pandemic of 1980s represents a similar period with data and insights acquired over years. | [
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PMC11482552 | One of the major drawbacks of the use of molecular HPV assays is the lack of standardized criteria regarding the minimum cellularity required to define sample adequacy. | [
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PMC9812014 | Further investigation revealed that these alkaloids decreased viral RNA copies. | [
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PMC11703896 | Vina was used to determine the docking affinity of ligands with receptors. | [
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PMC9841531 | To oppose the limited data situation and reduce data variation, the development of novel, easier-to-apply, reliable, and robust assays is an important factor, also in terms of the exploration of novel pharmacological drug targets. | [
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PMC11482552 | Similarly, the use of the CCR5 gene target has also been previously described for the normalization of HIV-1 pro-viral loads in clinical samples . | [
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PMC11267036 | The mechanisms through which DHM suppressed MM progression were displayed in Fig. 5. | [
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PMC11786156 | Scale bar: 50.0 μm. | [
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PMC10988555 | A control of pDNA cleaved with Hind III endonuclease was also used. | [
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PMC9693627 | A maximum mass deviation of 4.5 ppm was allowed for precursor’s identification and 20 ppm were set as match tolerance for fragment identification (acquisition in Orbitrap). | [
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PMC11742431 | The 0 h as a control. ( | [
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PMC7642379 | Interestingly, the fumarate hydratase gene along with the neighboring kynurenine 3-monooxygenase (KMO) gene, had a log2-fold copy ratio of < -1 in 293E, 293-F and Freestyle 293-F cell lines compared to the parental HEK293 (Fig. 2b and Supplementary Fig. S4), suggesting that these cells have half the number of copies co... | [
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PMC9429973 | Better responses were seen with mRNA-based vaccines and in transplanted patients, indicating that mRNA vaccines and stem cell transplantation may provide higher stimuli to the immune system and provide higher disease control and better immune reconstitution, respectively. | [
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PMC11697703 | To test whether this finding extends to endogenous Mapk8 mRNA and protein expression in mouse cortical neurons, we first performed loss-of-function (LoF) experiments in neuron cultures enriched in corticospinal and other corticofugal projection neuron subtypes (Figures 2D–2F). | [
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PMC11706297 | Afterwards, 4,5-dihydropyrazole-carbothioamides (B1 and B2) were synthesized via the reaction of A1 and A2 with thiosemicarbazide. | [
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PMC11474209 | Physical and biological methods, including applying chemicals, algaecides, and phosphorus precipitation, have been utilized to diminish the severity of cyanobacterial blooms . | [
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PMC6600253 | Primary murine lymphomas have been shown to respond to chemotherapeutic treatment with cyclophosphamide by engaging a senescence program controlled by p53 and p16 . | [
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PMC11422497 | Kim et al. reported that RAS-stimulated release of exosomes miR-494-3p promotes the osteolytic bone metastasis of breast cancer cells. | [
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PMC11271278 | These include both “trans” hijacking events that relocate enhancers from other chromosomes to a HAPI gene and “cis” hijacking events that relocate distant enhancers (>2 Mb, the upper limit of typical TAD domains) on the same chromosome. | [
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PMC9429973 | The most common all-grade adverse events (AEs) were headache (pts: 18% [<3 mo], 22% [3 to <6 mo], 12.5% [6 to ≤12 mo], 10% [>12 mo]) and thrombocytopenia (pts: 21% [<3 mo], 17% [3 to <6 mo], 12.5% [6 to ≤12 mo], 0% [>12 mo]). | [
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PMC11413393 | Dropout values represent the fold decrease in GFP+ cells at each passage, relative to the GFP+ percentage on day 0. | [
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PMC6948907 | There was a significant difference between the percentages of the cell viability of single agent treatment and combination treatment groups, between GE (24h) and GE/VPA (24 and 48 h) groups (P < 0.03), between GE 48h and GE/VPA 48 h groups (P < 0.013), between VPA 24h and GE/VPA 24 and 48 h groups (P < 0.002) and betwe... | [
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PMC7022782 | Cardiogreen (ICG) and Tween 20 were obtained from Sigma-Aldrich (St. Louis, MO, USA). | [
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PMC11367146 | Red indicates highly expressive genes, whereas blue indicates less expressive genes of OA. ( | [
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PMC11412721 | Here, on the contrary, male mice and a subset of male patients were more efficiently protected against Burkitt-like lymphomas, which adds another layer of complexity to sex-specific differences in tumorigenesis. | [
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PMC9473868 | The PI3K/Akt/mTOR signaling pathway is an important signaling pathway in the cell proliferation and apoptosis. | [
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PMC11224020 | Hair was removed with forceps. | [
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PMC2118063 | RNA prepared from splenic B cells from IRF8-deficient and WT mice was tested by qPCR for expression of Bcl6 and Aicda. | [
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PMC11765988 | Propionibacterium acnes, a skin commensal bacterium, is the only documented micro-organism cultured from sarcoid tissues. | [
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PMC9429973 | Study drug will be administered at a range of 1–50 mg twice daily, depending on age and weight; dosing categories are derived from pharmacokinetic modeling data of adults with PK deficiency. | [
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PMC11701801 | The cells were then reseeded again and treated with CP-C27. | [
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PMC11507371 | In this regard, cold atmospheric pressure plasma (CAP) is proving to be a promising tool for skin cancer therapy . | [
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PMC9509578 | Etoposide intracellular efficiency was enhanced by lipid nanocapsules in P-gp-overexpressing MDR cells . | [
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PMC7602170 | Although most patients with advanced GISTs display remarkable clinical benefits from TKI therapy by imatinib, resistance to TKIs occurs in half of those GIST patients. | [
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PMC11401358 | Hydrophobicity index of the Bombyx mori SF heavy chain, which is composed of a tyrosine-rich amorphous sequence (purple, blue and green) and 12 highly repetitive amino acid sequences (orange). ( | [
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PMC11301242 | Data were log2 converted. ( | [
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PMC11499381 | Data analysis was automated, meaning that the analysis pipeline was essentially blinded. | [
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PMC8348645 | The powdered plant samples were filtered using a sieve to remove larger lumps. | [
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PMC9429973 | In addition, the impact of SPM diagnosis on MM management and outcome are reported. | [
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PMC8658661 | Their study showed that in the HepG2 cell line, acetate, creatine, isoleucine, leucine, and phenylalanine were increased, which indicates a more enhanced lipid metabolism and active absorption of nutrients from the media than in L-02 cells. | [
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PMC9429973 | Summary/Conclusion: In this post hoc analysis of the ACE-LY-004 study of acalabrutinib in adult patients with confirmed R/R MCL, a shorter DOR was observed among patients who received acalabrutinib after 1 prior therapy compared with those who received acalabrutinib after ≥2 prior therapies, likely explained by a high ... | [
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PMC2614416 | The results are presented in a Sequence Table. | [
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PMC8526701 | A GIST-882 cells were treated with GSK602 at indicated concentrations for 24 h. Left, PUMA expression was analyzed by western blotting. | [
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PMC7022782 | Fluorescence measurements were performed using an RF-6000 spectrofluorometer (Shimadzu, Kyoto, Japan) with an excitation wavelength of 785 nm. | [
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PMC10631132 | The CMP in turn gives rise to the megakaryocyte/erythrocyte progenitor (MEP) and granulocyte/macrophage progenitor (GMP). | [
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PMC11694625 | The presence of the hydrazone group was confirmed by broad signal of NH protons and CHN protons at 11.79–11.35 ppm, 9.43–8.31 ppm respectively. | [
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PMC11763111 | At 48 h, the proportions of 4KO-LLT1 and 1KO CAR-T cells were significantly higher than those of 4KO CAR-T and PCDH-T cells (Fig. 5F). | [
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PMC8481254 | STZ-treated mice were also intraperitoneally injected daily with saline or insulin (Sigma, St. Louis, MO), with a final concentration of 2 units/kg. | [
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PMC6892818 | ACHN, 786-O and A-704 cells treated with mCD40L for 24 h in the absence of inhibitor (vehicle controls) were also included (denoted as positive control, ‘PC') for each experiment. | [
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PMC11467800 | These cells are Bcr‐Abl‐independent, no longer relying on it for survival. | [
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PMC9429973 | With first-line therapy, 54% of pts (n=50) achieved MRR vs. 46% (n=42) who did not. | [
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PMC9429973 | 387 reported vaccination with 282 fully vaccinated. | [
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PMC7338939 | This similar pattern of expression may be related to day of sampling, because we removed all tumors at day 15 with increasing tumor growth. | [
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PMC11240052 | All the cells were maintained in an incubator with 5% CO2 and saturated humidity at 37 °C. | [
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PMC9031474 | Another potential target of drimanes and coloratanes is the TRPA1 (transient receptor potential ankyrin 1) ion channel. | [
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PMC11629192 | Unlike in anti-NMDAR encephalitis, B-cell depletion in MS is not typically used for acute relapse management, which is generally administered with high-dose corticosteroids. | [
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PMC11033180 | Among the most prevalent comorbidities in ASD are gastrointestinal (GI) symptoms which are 4.4 times more frequent than in neurotypical individuals. | [
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PMC9895440 | Further information on research design is available in the Nature Portfolio Reporting Summary linked to this article. | [
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PMC11727306 | Statistical analysis of data was performed using SigmaStat 3.5 for Windows (Systat Software, San Jose, CA, USA). | [
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PMC9681981 | Enterotoxemia is endemic in Iran, and millions of vaccine doses are annually produced by the RVSRI in Iran. | [
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PMC11548041 | The data were analyzed using the LightCycler software (96 SW 1.0, Roche Diagnostics, Mannheim, Germany), and β-catenin expression was normalized to that of the housekeeping gene. | [
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PMC9429973 | Aims: We aimed to determine the efficacy and safety profile of the association ixazomib, pomalidomide and dexamethasone HR RRMM. | [
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PMC11546117 | In addition, serum-free medium or medium without cholera toxin was explored. | [
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PMC9429973 | The IBS for the stacking, IPS, and IPS-3 model was 0.078, 0.099, and 0.096, respectively, while the C-Index was 0.86, 0.73, and 0.71. | [
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PMC10758402 | We detected an increase in the CD3+ population inside the tumor compartment of mice treated with the combination regimen compared to all other groups by day 14; however, this did not reach statistical significance comparing to individual groups in post-hoc tests (ANOVA p=0.09, Figure 6A ). | [
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PMC11532793 | The faster computing time of edgeR-v4 over edgeR-v3 was a result of the newer estimation strategy of quasi-dispersions from edgeR, which allows the estimation of transcript-wise NB-dispersions to be completely bypassed. | [
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PMC11549062 | We also tested the carotid VSMCs migration and proliferation using Edu staining and scratch wound test. | [
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PMC9910796 | ASFV-infected Vero cells or transfected Cos cells, seeded on glass coverslips, were infected with parental ASFV virus or recombinant vEP84Ri for the indicated times, washed with PBS and fixed with methanol at -20°C for 5 min or with 4% PFA in PBS for 15 min at RT. | [
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PMC4360730 | In the current phase starting in 2012, the ENCODE project has added new genomic assays, a greater diversity of biological samples used in investigations, additional species (D. melanogaster and C. elegans) and new methods for validating and analyzing experimental data. | [
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PMC10728535 | These genes include PITX2, FIBIN, LRRTM4, ANO3, SNCA, FOLH1, KANK4, FGF18, POSTN, KANK1, GALNT14, EPHA7, ECEL1, and EPHX2 (Figures 5 and 6). | [
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PMC9352806 | The influences of BMS on the lifespan in daf-16 deficient mutant (D) (Control, n = 160; BMS 100, n = 144), hlh-30 deficient worms (E) (Control, n = 160; BMS 100, n = 129), and hlh-30 interfered worms (F) (Control, n = 110; BMS 100, n = 109). | [
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PMC11257203 | Furthermore, the average ratio of PCE to NCE in the group treated simultaneously with indomethacin (20 and 40 mg/kg) and curcumin (100 mg/kg) showed a significant increase compared to the group treated only with the same dose of indomethacin. | [
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PMC11711663 | Smoking and alcohol status were self-reported. | [
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PMC9429973 | Medical charts of all patients in both groups were retrieved from the hospital’s main archive and reviewed for the presence of venous and/or arterial thrombosis. | [
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PMC10812665 | Altogether, such relatively unspecific transcriptome regulations resulted here in a statistical over-representation of genes associated with systemic lupus erythematosus and alcoholism. | [
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PMC11286266 | Re-probing the blot with an anti-GFP antibody revealed that GFP-ATF6_LD was expressed at lower levels than ATF6α_LD (Figure 4C), potentially accounting for the reduced recovery of CRT in complex with ATF6α_LD. | [
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PMC4695073 | siRNAs sequences (Supplemental Table S2) referred to previously reports . | [
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PMC11589157 | To identify repeat sequences in the gibbon genome, a combination of de novo and homology-based approaches was employed. | [
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PMC9429973 | Here, we present preliminary data from the phase 2 trial of Zanubrutinib combined with immunochemotherapy in pts with CD79A/CD79B-mutant DLBCL (NCT04668365). | [
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PMC11786767 | We further investigated the distribution of lipid components at the perichromosomal layers. | [
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PMC9429973 | A. Bazinet, E. Jabbour, H. Kantarjian, K. Chien, C. DiNardo, M. Ohanian, N. Daver, R. Kanagal-Shamanna, T. Kadia, K. Takahashi, L. Masarova, N. Short, Y. Alvarado, P. Thompson, G. Montalban-Bravo, M. Yilmaz, F. Ravandi, M. Konopleva, M. Andreeff, S. Kornblau, N. Pemmaraju, D. Hammond, H. Schneider, B. Mirabella, G. Gar... | [
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"O",
... |
PMC11463018 | H NMR (400 MHz, Chloroform-d) δ: 12.03 (s, 1H), 8.81 (d, J = 7.8 Hz, 1H), 8.15 (s, 1H), 7.60 (t, J = 8.0 Hz, 1H), 7.32 (dd, J = 7.7, 0.6 Hz, 1H), 4.32–4.30 (m, 2H), 1.35 (t, J = 7.1 Hz, 3H). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11781181 | HRP-conjugated goat secondary antibodies were used (diluted 1:5,000, Invitrogen). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"HRP-conjugated",
"goat",
"secondary",
"antibodies",
"were",
"used",
"(",
"diluted",
... |
PMC11727062 | Bufonidae, characterized as cool in nature, pungent, and toxic, is associated with the Heart, Liver, Spleen, and Lung meridians in TCM. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9429973 | To study the impact of hnRNP K overexpression in vivo, we developed an inducible tamoxifen mouse model activated 30-60 days after birth (Hnrnpk). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11323699 | Second, resistance to PARP inhibitors (PARPis) is one of the most important and immediate challenges facing oncologists today (Fig. 1, bottom panel). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9429973 | Being these samples left outside the digital world, it is not possible to leverage tools such as Artificial Intelligence (AI) algorithms to support diagnosis in hematological medical images. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC7351993 | The mutant library was cultured under phototrophic conditions (continuous illumination at 250 μmol photons m s with 2% CO2 aeration at 30 °C) using double-deck photobioreactors (lower stage containing 2 M NaHCO3/Na2CO3 to supply CO2 gas and upper stage containing cell culture) and Modified Bold (MB) 6 N medium for 4 da... | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9917080 | Cortical tissue cuts from one animal were used for each cell culture preparation. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Cortical",
"tissue",
"cuts",
"from",
"one",
"animal",
"were",
"used",
... |
PMC11291490 | This enhancement could be attributed to the role of the CD40-CD40L signaling pathway in promoting B cell proliferation, differentiation, activation, and antibody production. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
... |
PMC7081114 | In vitro reconstitution studies show that KIF21B increases the microtubule growth rate and catastrophe frequency. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"In",
"vitro",
"reconstitution",
"studies",
"show",
"that",
... |
PMC11342785 | Upon rapamycin treatment, a synMAP’s MT binding and IDR components become connected to stimulate the assembly of higher-order MT structures. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Upon",
"rapa... |
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