PMCID string | Sentences string | ner list |
|---|---|---|
PMC11705067 | A venn diagram of differentially expressed genes was created using the online tool Venny2.1.0, and the heatmap and volcano plot of differential expression genes about the gene expression profiles in the GSE53757 and GSE66272 databases were drawn by R software (version 4.0.3; R Foundation). | [
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PMC11206502 | Meanwhile, cisplatin-based adjuvant chemotherapy remains a valid option for muscle-invasive bladder cancer . | [
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PMC11748335 | BEDtools was used for excluding regions within the blacklist . | [
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PMC11653533 | Also, β-sitosterol, β-amyrin, and lupiol acetate were isolated from the stem bark of F. glomerata have manifested hypoglycemic potency by activating glucose-6-phosphate dehydrogenase enzyme with an enzyme activity of 273.20, 212.00 and 239.00 unit/min. | [
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PMC11670407 | a-d To maintain cell number consistency, we transfected 143B or U2OS cells with the indicated siRNAs and overexpression plasmids for 48 h, followed by treatment with MG132 (10 μM) for 6 h before harvesting the cells. | [
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PMC7192625 | XRCC6BP1 (ATP23) is a gene involved in DNA break repair, often amplified in glioblastoma. | [
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PMC11528603 | Interestingly, Le-Trung et al. recently isolated acetylmelodorinol (AM) from the ethyl acetate fraction of S. affinis seeds. | [
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PMC6742971 | Therefore, we compared the T cell's function in experiments using T cell clones with defined avidity, by using them individually and in parallel to mixtures of T cell cones with different avidities. | [
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PMC9429973 | Despite there were no significant differences between the groups of patients with MDS, platelets from patients without AD showed a clear decrease in their ability to be activated by TRAP and was almost absent in three of them. | [
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PMC11723947 | To characterize the gene networks that HP1α regulates, we next used deep total RNA-sequencing (RNA-seq) to analyze the transcriptomes of wild-type and mutant cells. | [
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PMC11583010 | T47D (ATCC) and HCT-116 (Horizon Discovery, Perkin Elmer) were cultured in RPMI medium supplemented with 10% FBS. | [
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PMC7215722 | These membranes are liquid-ordered lipid–protein assemblies enriched in cholesterol and sphingolipids that float within the liquid-disordered bilayer of cellular membranes . | [
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PMC11144200 | K, L Representative fluorescence microscopy images of Hep3B or A-427 cells after incubation with LPS-RGD-Nb36-DOX for 2 h, 4 h, and 6 h, respectively. | [
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PMC11204465 | This paper reviews the structures, biological activities, biosynthetic pathways, and chemical total synthesis of AFs and STCs. | [
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PMC11791264 | Error bars represent the mean ± SD (n = 3). | [
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PMC11258145 | The integrity of the HL-60 and SK-N-SH membranes after exposure to different concentrations of curcumin was determined by measuring the amount of released lactate dehydrogenase (LDH). | [
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PMC11621493 | I–K) Total MAG, DAG, and TAG levels calculated based on the sum of signals from all detected subspecies. | [
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PMC11701801 | The ON-TARGETplus SMARTPool siRNAs specific for target genes CREBBP (L-003477-00), EP300 (L-003486-00), KREMEN2 (L-003847-00), and KREMEN1 (L-003846-00) were purchased from Dharmacon. | [
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PMC11482552 | In the majority of assays which include an IC, this is associated with the qualitative detection of a Beta-globin gene target, used to assess both the presence of human cells in the sample as well as any potential PCR inhibition in the same reaction well used for the detection of HPV DNA targets. | [
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PMC11472639 | Additionally, ADCCPlasma post-exercise (34.1%) was significantly greater than ADCCHI-FCS post-exercise (23.3%) (t(7) = 3.72, p = 0.007, d = 1.31), with a trend towards a difference pre-exercise (t(7) = 2.10, p = 0.07, d = 0.75).Fig. | [
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PMC11787355 | Top two gRNAs without self-complementarity were selected and cloned into the lentiCRISPRv2blast construct (Addgene #83480; RRID:Addgene 83480). | [
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PMC11543885 | Wash with 2 mL quencher buffer per well for another two times, each wash lasting 1 min. | [
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PMC3019555 | qRT-PCR was performed using iQ SYBR green supermix (Bio-Rad Laboratories) and the following specific primers: HIF-1α (forward, 5′-TGGTGACATGATTTACATTTCTGA-3′; reverse, 5′-AAGGCCATTTCTGTGTGTAAGC-3′), GAPDH (forward, 5′-GGAGTCAACGGATTTGGTCG-3′; reverse, 5′-CTTGATTTTGGAGGGATCTCG-3′), or p53 (forward, 5′-TCACAGCACATGACGGAG... | [
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PMC9429973 | 6% vs. 17%, p=0.3, Fig. 1D). | [
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PMC11770130 | LD-independent SNPs from corresponding GWAS that passed the same SNP filtering and proxy search steps mentioned previously were used as instrument variables. | [
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PMC9080589 | Differences between multiple groups were analyzed by ANOVA followed by Tukey's post hoc test. | [
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PMC9429973 | The primary endpoint was mean change from baseline in QTc. | [
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PMC10577955 | After ALUP, BA, and LUP treatment, cells were aggregated at the G2/M phase, thus we tried to measure the number of cells in each stage of apoptosis. | [
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PMC9429973 | We have established a workflow to initiate germline genetic testing in pts under suspicion for a HHD. | [
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PMC11544122 | Similar to CXCR4, most GPCRs are robustly phosphorylated on their CTs, including the prototypical GPCRs, which use the β-arrestin mode for endocytosis, such as β2AR, AT1AR, and V2R (Fig. 4c). | [
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PMC11707832 | Post-translational modifications of MAN2B1 polypeptides occur within the endoplasmic reticulum. | [
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PMC11711935 | Wnt inhibitory factor‐1 (WIF‐1) can also promote melanin synthesis in melanocytes. | [
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PMC10899471 | qPCR analysis of MET expression in HT-1080 cells transfected with control or miR-939 mimic or inhibitor. * | [
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PMC10898159 | These findings indicate the potential of PBOX-15 to improve the apoptotic response of IM in GIST cells and provide a more effective treatment option for GIST patients. | [
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PMC11763111 | According to earlier research, off-the-shelf CAR-T cells do not overproliferate and produce CRS. | [
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PMC9429973 | The percentage of JAK2 positive patients in patients with a score of 1-3 was 24% versus 0.8% in patients with a score of 0. | [
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PMC11806106 | After application of a non-saturating concentration of DAMGO, the signal was reversible by application of the antagonist naloxone (Supplementary Fig. 3B) and application of extracellular buffer induced no change in BRET ratio (Supplementary Fig. 3C).Fig. | [
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PMC11413393 | n = 5 mice/group (RCC243_NT shRNA (+)Dox, RCC243_PRMT1 shRNA (+)Dox and 786-0_PRMT1 shRNA (+)Dox) and n = 3 mice/group (RCC243_PRMT1 shRNA (-)Dox, 786-0_NT shRNA (+)Dox and 786-0_PRMT1 shRNA (-)Dox). | [
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PMC10329074 | For instance, YBX3 promoted the metastasis of nasopharyngeal carcinoma via PI3K/AKT signaling (Fan et al. 2021). | [
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PMC11750712 | The gating strategy is available in the Supplementary Information. | [
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PMC9429973 | In summary, our study uncovers how the TME can contribute to leukemic transformation which provides alternative avenues for therapeutic interventions. | [
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PMC10048572 | After growth cells were re-cloned by the limiting dilutions, 180 B4 subclones and 381 O1 subclones were tested by STR-PCR. | [
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PMC9429973 | The cell viability was tested simultaneously by trypan blue exclusion test and by flow cytometry with 7 -aminoactinomycin D (7-AAD) without lysing solution. | [
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PMC11730311 | Results are presented as mean ± range of n = 3.Table 1Results from Schild regression analyses.pA2Schild slopehαCGRP8-37No modifications8.23 ± 0.110.94 ± 0.15hαCGRP8-37A36S8.78 ± 0.421.08 ± 0.23hαCGRP8-37N25K-C20DA-γGlu8.33 ± 0.290.98 ± 0.15hαCGRP8-37A36S, N25K-C20DA-γGlu8.17 ± 0.501.83 ± 0.53Experiments were performed ... | [
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PMC10421378 | Through adhesion, probiotic bacteria can competitively exclude or inhibit the attachment of pathogenic microorganisms to the intestinal epithelium. | [
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PMC11772585 | Next, we sought to detect cSCC cell apoptosis following METTL1 knockdown. | [
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PMC11122631 | In addition, in silico tools were used to predict the possible effects of isolated compounds on human tumor cell lines and nitric oxide production, as well as the pharmacological potentials. | [
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PMC9895440 | Then cells were rigorously resuspended using ice cold FACS buffer (PBS with 2% FCS, 5 mM EDTA, and 0.1% Sodium azide) and spun at 4 °C. | [
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PMC11461874 | After 48 h, 100 μg/mL cycloheximide was treated. | [
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PMC9341513 | Example snapshot from simulations showing the CCND1-TAD in GM12878 cells (pale orange region). | [
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PMC11400680 | Cellular features: additionally, we also take into account other metrics that are crucial for cell analysis. | [
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PMC10568263 | All experiments were performed in triplicate and the average was recorded. | [
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PMC11412752 | In hepatocellular carcinoma tissues, the mRNA levels of genes involved in the cGAS-STING pathway are up-regulated . | [
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PMC10914904 | Curiously, MVP levels are reduced during IAV infection in the same cell line; however, the role of MVP in this process is unclear . | [
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PMC9844987 | All 108 LCLs were grown unsynchronized for 5–7 passages and harvested when they reached>20million cells. | [
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PMC11470381 | The protocol was used and published in the following research article: Liu et al. . | [
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PMC11618052 | Compounds 8g and 8h were further examined as activators of caspases 3, 8, and Bax and down-regulators of the anti-apoptotic protein Bcl2. | [
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PMC9780037 | Acidic environment inverts electrical charge causing the detachment of the gold nanoparticles and the release of cyt c (Figure 3F). | [
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PMC9429973 | Summary/Conclusion: Patients in the early period after HSCT have a higher risk of developing lower respiratory tract infection, more likely to require antifungals, reserve group antibiotics, and have a greater risk of death from COVID-19. | [
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PMC10419319 | Although isoalantolactone has a therapeutic effect on the recovery of chemoresistance through alteration in glucose metabolism and survival signaling pathways, further studies are required to clarify their relationship and the exact mechanism of isoalantolactone. | [
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PMC11185260 | However, adding scL-vec to cisplatin treatment did not increase the Annexin V fraction compared with cisplatin monotherapy. | [
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PMC11644761 | Additionally, pterostilbene alters DNA methylation patterns. | [
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PMC9429973 | Image: Summary/Conclusion: Magrolimab + AZA was well tolerated with promising efficacy in pts with untreated HR MDS, including those with TP53-mutated and –wild-type disease. | [
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PMC10073922 | LX-2 has been used in some studies to determine tumor specificity of some promoters . | [
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PMC11392912 | The sequence of Stem-loop primer and Clo-miR-14 were as follows: Stem-loop primer for Clo-miR-14 (5-GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACGCCTGGG-3) , Clo-miR-14 (5′-CGGCGGCTACTGTGAGTTTCC-3′, 5-GTCGTATCCAGTGCAGG GTCC-3′). | [
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PMC8567602 | L1 and L2 refer to the lobes by which SMARCA2/4 translocates DNA around the nucleosome.) | [
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PMC10719213 | Hence, to mimic slow cell depletion in this culture system, 5 nM cladribine for 4 days was selected. | [
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PMC9429973 | Aims: This study investigated if a machine learning approach utilizing real world data from aHL patients can outcompete the IPS in predicting overall survival (OS). | [
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PMC10999934 | Then, we had an intersection of three DEGs. | [
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PMC9275501 | Cell uptake and localization studies showed that MSNs with a layer of polyethylene glycol lipid bilayer could effectively carry drugs into cancer cells with sustained release characteristics, reduce the clinical dosage of the drug, reduce its side effects, and showed good targeting characteristics for breast cancer. | [
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PMC11306331 | Scale bar: 10 μm. | [
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PMC11764090 | But there are still few corresponding hormone fertilizers for cold stress, so further research is necessary for the construction and mining of the cold stress network. | [
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PMC11711063 | In contrast, Bex + Carv inhibited colony formation, reduced Ki67 levels, ZG16B expression and glucose uptake in MDA‐MB231 xenografts. | [
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PMC5311252 | Unsupervised cluster analysis of the LUAD and BRCA gene expression profiles was performed using the 275 genes of the oncomotif-miRNA signature. | [
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PMC11180402 | G–H Colony images in soft agar with/without ISO treatment (G), and colony count per 10 cells (H). | [
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PMC11519583 | Cells were solubilized with lysis buffer (50 mM Tris-HCl [pH 7.5], 150 mM NaCl, 0.5% [v/v] Nonidet P-40, 5 mM EDTA, 50 mM NaF, 1 mM Na3VO4, 10 μg/ml aprotinin [Takara Bio], 10 μg/ml leupeptin [PEPTIDE INSTITUTE, INC.], | [
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PMC11461874 | j Control and TRAF7 KO NIH3T3 cells were transiently transfected with plasmids for DN mutant of UBE2G1/UBE2T together with expression plasmids for Flag-DBP. | [
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PMC9429973 | I. Hortensia-Marioara, I. Ionita, I. Claudiu, D. Calamar Popovici, M. Ionita, D. Oros Spitalul Clinic Municipal de Urgenta, Timișoara, Romania Background: Autoimmune hemolytic anemia (AIHA) is characterized by the production of autoantibodies to red blood cell surface antigens with destruction of red blood cells by com... | [
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PMC7039683 | Three independent biological replicates were subjected to RNA-seq profiling. | [
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PMC11470999 | The data indicated that PF significantly inhibited lung metastasis growth, outperforming TMZ (Figure 2D,F,H). | [
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PMC11739484 | Quantification of wound healing at 24 hours. ( | [
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PMC9920575 | Then, the cells were centrifuged, and the supernatant was transferred onto 96-well plates (Corning Costar, St. Louis, MO, USA) with 2X Reaction Buffer 8 and a colorimetric substrate of caspase-8. | [
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PMC11635087 | Scale bar, 20 μm. | [
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PMC10743717 | would accelerate the oxidative inactivation of the protective neurosteroid, 17β-estradiol (see Figure 10) and thus be harmful to the function and structure of brain mitochondria. | [
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PMC11747467 | RC48 (Remegen, China) was injected via the tail vein at a dose of 10 mg/kg per mouse, once or twice a week. | [
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PMC9318744 | Several cell culture models are available for monitoring SARS-CoV-2 infection and pseudotyped virus activity. | [
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PMC6364197 | On one hand, we think that the bionic 3D scaffold with the capability of supporting the leukemic cells for a longer period has immense potential in drug screening. | [
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PMC6461034 | Both TiO2 capture data (CRC, PXD001550; Piersma et al, 2015) and pTyr antibody capture data (pancreatic ductal adenocarcinoma, PDAC; PXD003198; Humphrey et al, 2016) were included. | [
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... |
PMC11049294 | Data showing a normal distribution an unpaired Student’s t-test, for a multiparametric analysis ANOVA test following Bonferroni correction, were used. | [
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"tokens": [
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... |
PMC9429973 | Following stimulation with ODN 2006, 25/42 (60%) patient samples showed an increase in CLL cell migration (‘Responders’) and 17/42 (40%) showed either no change or a decrease in CLL cell migration (‘Non/Reverse Responders). | [
{
"tags": [
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... |
PMC11300639 | KEGG and GSEA analysis were performed. | [
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PMC11747467 | Under STAT3-silencing conditions, RC48 significantly inhibited cell growth ( Figure 5C ). | [
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PMC9429973 | RT-PCR was performed according to European recommendations, as described previously. | [
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... |
PMC9583612 | First, we use CEMS to record ambient methane concentrations at participating facilities. | [
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"tags": [
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"ambient",
"methane... |
PMC9429973 | Palliative treatment with blood products was used in the study patients during the 6 months prior to their death, with a median of 261.5 cubic centimeters (cc) (IQR 242 - 293) of doses of blood products and a median of 1 unit (IQR 1-2) transfused per patient. | [
{
"tags": [
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"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9429973 | Safety and efficacy data support the evaluation of mitapivat in children with PK deficiency who are not regularly transfused. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
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"tokens": [
"Safety",
"and",
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"data... |
PMC10452486 | B27 mutants with C can generate S-S bonds with intra-chain cysteines of the α2 and α3 domains; however, these misfolded forms may not exit the ER in human cells (114). | [
{
"tags": [
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
... |
PMC11279598 | Independent reports have provided evidence that honey such as Manuka honey exerts anti-proliferative effects against several types of cancer cells in vitro . | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Independent",
... |
PMC11267830 | Flow cytometric analysis of the liver, spleen, and bone marrow from the mice stained with a human CD45+ antibody revealed a significant decrease in the percentage of cells that were positive for J.gamma1, underscoring the efficacy of the drug in these tissues (Fig. 3f). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11772585 | Collectively, these findings support the conclusion that METTL1 functions as an oncogene in cSCC.Fig. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O"
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"tokens": [
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",",
"these",
"findings",
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... |
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